ISX ORF clone FXC02489

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC02489

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Clone info.

Species

human

Clone Name

pF1KB7514 Sequence (with vector) Restriction Map

Product ID

FXC02489

HaloTag Clone PID

FHC02489

ORF Sequence

DNA sequence (735 bp)
Protein sequence (245 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463804]

Gene

KIBB7514

Symbol

ISX

Alias : Pix-1, RAXLX

Description

intestine-specific homeobox

Original Clone ID

cs00014

Features of the cloned ORF sequence

Description

Length: 735 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 245 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33640.1 3.9e-79 100.0 ISX CCDS11972.1 7.9e-13 35.3 RAX CCDS12112.1 4.9e-12 39.2 RAX2 CCDS31468.1 2.1e-11 35.6 ALX4 CCDS819.1 6.3e-11 36.1 ALX3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 83 139 PF00046 Homeobox HMMSmart IPR001356 82 144 SM00389 Homeobox ProfileScan IPR001356 80 140 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001290437 245 612019 100.0 100.0 NP_038463 346 601881,611038 35.3 88.2 NP_006483 343 136760,606014 36.1 95.9 NP_852126 403 122880,148820,193500,268220,606597 34.5 89.0 NP_852125 407 122880,148820,193500,268220,606597 34.5 89.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7514 Download

>KIBB7514  735 bp
ATGTGTGCTGAGGTGGGCCCTGCTCTCTGCAGGGGTATGGAGAGAAATAGCTTGGGGTGC
TGTGAGGCCCCGAAGAAGCTGAGCCTGTCCTTCTCCATTGAGGCGATCCTAAAGAGGCCT
GCCAGGAGGAGTGATATGGACAGACCAGAAGGGCCAGGTGAAGAGGGCCCCGGAGAAGCT
GCGGCCTCAGGCTCTGGGCTAGAAAAGCCTCCAAAGGACCAGCCCCAGGAAGGAAGGAAG
AGCAAGCGGAGGGTTCGTACCACCTTCACCACTGAGCAGCTGCATGAGCTGGAGAAGATC
TTCCACTTTACCCACTACCCAGACGTTCACATCCGCAGCCAGCTGGCAGCCAGGATCAAC
CTCCCAGAAGCTCGGGTGCAGATCTGGTTCCAGAATCAGCGAGCCAAGTGGCGGAAGCAG
GAGAAGATTGGCAACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCC
ACAAATCTGGATGTGGCTGGGCCCACGTGGACATCCACTGCTCTGCGCAGGCTGGCTCCT
CCCACGAGCTGTTGTCCATCGGCTCAAGATCAGCTGGCCTCTGCCTGGTTCCCTGCCTGG
ATCACCCTCCTCCCAGCGCACCCATGGGAAACACAGCCTGTCCCAGGTCTTCCCATCCAT
CAAACTTGCATCCCTGTGCTATGCATCCTTCCACCTCCACACCCCAAATGGGGCAGCATC
TGTGCTACTTCAACA

ORF Protein

Cloned ORF protein sequence for pF1KB7514 Download

>KIBB7514  245 aa
MCAEVGPALCRGMERNSLGCCEAPKKLSLSFSIEAILKRPARRSDMDRPEGPGEEGPGEA
AASGSGLEKPPKDQPQEGRKSKRRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARIN
LPEARVQIWFQNQRAKWRKQEKIGNLGAPQQLSEASVALPTNLDVAGPTWTSTALRRLAP
PTSCCPSAQDQLASAWFPAWITLLPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSI
CATST

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7514 Download

>pF1KB7514  3848 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTGTGCTGAG
GTGGGCCCTGCTCTCTGCAGGGGTATGGAGAGAAATAGCTTGGGGTGCTGTGAGGCCCCG
AAGAAGCTGAGCCTGTCCTTCTCCATTGAGGCGATCCTAAAGAGGCCTGCCAGGAGGAGT
GATATGGACAGACCAGAAGGGCCAGGTGAAGAGGGCCCCGGAGAAGCTGCGGCCTCAGGC
TCTGGGCTAGAAAAGCCTCCAAAGGACCAGCCCCAGGAAGGAAGGAAGAGCAAGCGGAGG
GTTCGTACCACCTTCACCACTGAGCAGCTGCATGAGCTGGAGAAGATCTTCCACTTTACC
CACTACCCAGACGTTCACATCCGCAGCCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCT
CGGGTGCAGATCTGGTTCCAGAATCAGCGAGCCAAGTGGCGGAAGCAGGAGAAGATTGGC
AACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCCACAAATCTGGAT
GTGGCTGGGCCCACGTGGACATCCACTGCTCTGCGCAGGCTGGCTCCTCCCACGAGCTGT
TGTCCATCGGCTCAAGATCAGCTGGCCTCTGCCTGGTTCCCTGCCTGGATCACCCTCCTC
CCAGCGCACCCATGGGAAACACAGCCTGTCCCAGGTCTTCCCATCCATCAAACTTGCATC
CCTGTGCTATGCATCCTTCCACCTCCACACCCCAAATGGGGCAGCATCTGTGCTACTTCA
ACAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT