RBMXL1 ORF clone FXC02187

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Flexi ORF Clone FXC02187

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Clone info.

Species

human

Clone Name

pF1KB5348 Sequence (with vector) Restriction Map

Product ID

FXC02187

HaloTag Clone PID

FHC02187

Original Clone PID

ORK02187

ORF Sequence

DNA sequence (1170 bp)
Protein sequence (390 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB462999]

Gene

KIBB5348

Symbol

RBMXL1

Alias : RBM1

Description

RNA binding motif protein, X-linked-like 1, transcript variant 2

Original Clone ID

bm04001

Features of the cloned ORF sequence

Description

Length: 1170 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 390 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS716.1 1.1e-70 100.0 RBMXL1 CCDS14661.1 1.3e-66 95.1 RBMX CCDS7777.1 1.9e-44 69.2 RBMXL2 CCDS83521.1 9.2e-28 51.5 RBMY1D CCDS35479.1 2.1e-27 51.4 RBMY1B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition BlastProDom NULL 170 217 PD922271 NULL HMMPfam IPR000504 10 80 PF00076 RNA recognition motif domain IPR012604 173 217 PF08081 RBM1CTR HMMSmart IPR003954 9 82 SM00361 RNA recognition motif domain IPR000504 9 82 SM00360 RNA recognition motif domain ProfileScan IPR000504 8 86 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002130 391 300199,300238 95.1 100.0 NP_055284 392 605444 69.2 100.0 XP_011529740 385 400006,415000 57.3 100.0 NP_001307873 459 400006,415000 51.5 90.3 XP_011529739 422 400006,415000 51.4 99.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5348 Download

>KIBB5348  1170 bp
ATGGTTGAAGCAGATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACGGAAACAAAT
GAGAAAGCTCTTGAAACAGTATTTGGCAAATATGGACGAATAGTGGAAGTACTCTTGATA
AAAGACCGTGAAACCAACAAATCAAGAGGATTTGCTTTTGTCACCTTTGAAAGCCCAGCA
GACGCTAAGGATGCAGCCAGAGACATGAATGGAAAGTCATTAGATGGAAAAGCCATCAAG
GTGGAACAAGCCACCAAACCATCATTTGAAAGAGGTAGACATGGACCGCCCCCACCTCCA
AGAAGTAGAGGTCCTCCAAGAGGTTTTGGAGCTGGAAGAGGAGGAAGTGGAGGAACCAGG
GGACCTCCTTCACGAGGAGGACACATGGATGATGGTGGATATTCCATGAATTTTAACATG
AGTTCTTCCAGGGGACCACTCCCAGTAAAAAGAGGACCACCACCAAGAAGTGGGGGTCCT
TCTCCTAAGAGATCTGCACCTTCAGGACTAGTTCGCAGCAGCAGTGGAATGGGAGGAAGA
GCTCCTCTATCACGTGGAAGAGATAGTTATGGAGGTCCACCTCGAAGGGAACCGCTCCCC
TCTCGTAGAGATGTTTATTTGTCCCCAAGAGATGATGGGTATTCTACTAAAGACAGCTAT
TCAAGCAGAGATTACCCAAGTTCTCGTGATACAAGAGATTATGCACCACCACCACGAGAT
TATACTTACCGTGATTATGGTCATTCCAGTTCACGTGATGACTATCCATCAAGAGGCTAT
GGCGATAGAGATGGATATGGTCGTGATCGTGACTATTCAGATCATCCAAGTGGAGGTTCC
TACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTGCTCCACTTACACGAGGGCCC
CCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTATAGCAGCTCACGTGATGGATAT
GGTGGAAGTCGAGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTTGTGACAGG
GTTGGCAGACAAGAAAGAGGGCTTCCCCCTTCTGTAGAAAGGGGGTACCCTTCTTCACGT
GATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAGGTGCTGGCCCTGGAGGAAGCCGA
TCTGATAGAGGGGGAGGCAGAAGCAGATAC

ORF Protein

Cloned ORF protein sequence for pF1KB5348 Download

>KIBB5348  390 aa
MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA
DAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTR
GPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGMGGR
APLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRD
YTYRDYGHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPLTRGP
PPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSCDRVGRQERGLPPSVERGYPSSR
DSYSSSSRGAPRGAGPGGSRSDRGGGRSRY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5348 Download

>pF1KB5348  4283 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTTGAAGCA
GATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACGGAAACAAATGAGAAAGCTCTT
GAAACAGTATTTGGCAAATATGGACGAATAGTGGAAGTACTCTTGATAAAAGACCGTGAA
ACCAACAAATCAAGAGGATTTGCTTTTGTCACCTTTGAAAGCCCAGCAGACGCTAAGGAT
GCAGCCAGAGACATGAATGGAAAGTCATTAGATGGAAAAGCCATCAAGGTGGAACAAGCC
ACCAAACCATCATTTGAAAGAGGTAGACATGGACCGCCCCCACCTCCAAGAAGTAGAGGT
CCTCCAAGAGGTTTTGGAGCTGGAAGAGGAGGAAGTGGAGGAACCAGGGGACCTCCTTCA
CGAGGAGGACACATGGATGATGGTGGATATTCCATGAATTTTAACATGAGTTCTTCCAGG
GGACCACTCCCAGTAAAAAGAGGACCACCACCAAGAAGTGGGGGTCCTTCTCCTAAGAGA
TCTGCACCTTCAGGACTAGTTCGCAGCAGCAGTGGAATGGGAGGAAGAGCTCCTCTATCA
CGTGGAAGAGATAGTTATGGAGGTCCACCTCGAAGGGAACCGCTCCCCTCTCGTAGAGAT
GTTTATTTGTCCCCAAGAGATGATGGGTATTCTACTAAAGACAGCTATTCAAGCAGAGAT
TACCCAAGTTCTCGTGATACAAGAGATTATGCACCACCACCACGAGATTATACTTACCGT
GATTATGGTCATTCCAGTTCACGTGATGACTATCCATCAAGAGGCTATGGCGATAGAGAT
GGATATGGTCGTGATCGTGACTATTCAGATCATCCAAGTGGAGGTTCCTACAGAGATTCA
TATGAGAGTTATGGTAACTCACGTAGTGCTCCACTTACACGAGGGCCCCCGCCATCTTAT
GGTGGAAGCAGTCGCTATGATGATTATAGCAGCTCACGTGATGGATATGGTGGAAGTCGA
GACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTTGTGACAGGGTTGGCAGACAA
GAAAGAGGGCTTCCCCCTTCTGTAGAAAGGGGGTACCCTTCTTCACGTGATTCCTACAGC
AGTTCAAGCCGCGGAGCACCAAGAGGTGCTGGCCCTGGAGGAAGCCGATCTGATAGAGGG
GGAGGCAGAAGCAGATACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGAT
CCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTC
AGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTG
CTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCT
ACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCT
TCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCT
CGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGG
GTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTC
GTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGA
GCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGG
CAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTA
TAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGG
GGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTG
CTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTAT
TACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT