-
SpecieshumanProduct IDFXC01358Cloning SiteSgfI-PmeIGeneKIBB4076SymbolZNF10
Alias : KOX1Descriptionzinc finger protein 10Original Clone IDfj19237
Length: 1719 bp
Restriction map A
Restriction map B
-
Length: 573 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS9283.1 4.4e-131 100.0 ZNF10 CCDS74471.1 5.7e-56 49.0 ZNF135 CCDS42558.1 1.4e-53 45.6 ZNF568 CCDS74472.1 2.2e-52 48.6 ZNF135 CCDS56092.1 6.3e-51 44.8 ZNF568
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 14 54 PF01352 Krueppel-associated box IPR007087 265 287 PF00096 Zinc finger IPR007087 293 315 PF00096 Zinc finger IPR007087 321 343 PF00096 Zinc finger IPR007087 349 371 PF00096 Zinc finger IPR007087 377 399 PF00096 Zinc finger IPR007087 405 427 PF00096 Zinc finger IPR007087 433 455 PF00096 Zinc finger IPR007087 461 483 PF00096 Zinc finger IPR007087 489 511 PF00096 Zinc finger HMMSmart IPR001909 14 74 SM00349 Krueppel-associated box IPR015880 265 287 SM00355 Zinc finger IPR015880 293 315 SM00355 Zinc finger IPR015880 321 343 SM00355 Zinc finger IPR015880 349 371 SM00355 Zinc finger IPR015880 377 399 SM00355 Zinc finger IPR015880 405 427 SM00355 Zinc finger IPR015880 433 455 SM00355 Zinc finger IPR015880 461 483 SM00355 Zinc finger IPR015880 489 511 SM00355 Zinc finger IPR015880 517 539 SM00355 Zinc finger ProfileScan IPR001909 14 85 PS50805 Krueppel-associated box IPR007087 206 237 PS50157 Zinc finger IPR007087 265 292 PS50157 Zinc finger IPR007087 293 320 PS50157 Zinc finger IPR007087 321 348 PS50157 Zinc finger IPR007087 349 376 PS50157 Zinc finger IPR007087 377 404 PS50157 Zinc finger IPR007087 405 432 PS50157 Zinc finger IPR007087 433 460 PS50157 Zinc finger IPR007087 461 488 PS50157 Zinc finger IPR007087 489 516 PS50157 Zinc finger IPR007087 517 544 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056209 573 194538 100.0 100.0 XP_005259268 670 604077 48.8 98.8 XP_016882729 658 604077 49.0 97.7 NP_001276330 658 604077 49.0 97.7 NP_001276331 616 604077 48.6 92.7 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB4076 Download>KIBB4076 1719 bp ATGGATGCTAAGTCACTAACTGCCTGGTCCCGGACACTGGTGACCTTCAAGGATGTATTT GTGGACTTCACCAGGGAGGAGTGGAAGCTGCTGGACACTGCTCAGCAGATCGTGTACAGA AATGTGATGCTGGAGAACTATAAGAACCTGGTTTCCTTGGGTTATCAGCTTACTAAGCCA GATGTGATCCTCCGGTTGGAGAAGGGAGAAGAGCCCTGGCTGGTGGAGAGAGAAATTCAC CAAGAGACCCATCCTGATTCAGAGACTGCATTTGAAATCAAATCATCAGTTTCCAGCAGG AGCATTTTTAAAGATAAGCAATCCTGTGACATTAAAATGGAAGGAATGGCAAGGAATGAT CTCTGGTATTTGTCATTAGAAGAAGTCTGGAAATGTAGAGACCAGTTAGACAAGTATCAG GAAAACCCAGAGAGACATTTGAGGCAAGTGGCATTCACCCAAAAGAAAGTACTTACTCAG GAGAGAGTCTCTGAAAGTGGTAAATATGGGGGAAACTGTCTTCTTCCTGCTCAGCTAGTA CTGAGAGAGTATTTCCATAAACGTGACTCACATACTAAAAGTTTAAAACATGATTTAGTT CTTAATGGTCATCAGGACAGTTGTGCAAGTAACAGTAATGAATGTGGTCAAACTTTCTGT CAAAACATTCACCTTATTCAGTTTGCAAGAACTCACACAGGTGATAAATCCTACAAATGC CCTGATAATGACAACTCTCTTACTCATGGTTCATCTCTTGGTATATCAAAGGGCATACAT AGAGAGAAACCCTATGAATGTAAGGAATGTGGAAAATTCTTCAGCTGGCGCTCTAATCTT ACTAGGCATCAGCTTATTCATACTGGAGAAAAACCCTATGAGTGTAAAGAATGTGGAAAG TCTTTCAGCCGGAGTTCTCACCTCATTGGACATCAAAAGACCCATACTGGTGAGGAACCC TATGAATGTAAAGAATGTGGAAAATCCTTCAGCTGGTTCTCTCACCTTGTTACTCATCAG AGAACTCATACAGGAGACAAACTGTACACATGTAATCAGTGTGGGAAATCTTTTGTTCAT AGCTCTAGGCTTATTAGACACCAGAGGACACATACTGGAGAGAAACCCTATGAATGTCCT GAATGTGGGAAATCTTTCAGACAGAGCACACATCTCATTCTGCATCAGAGAACCCATGTG AGAGTGAGGCCCTATGAATGCAATGAATGTGGAAAGTCTTACAGCCAGAGATCTCACCTT GTTGTGCATCATAGAATTCACACTGGACTAAAACCTTTTGAGTGTAAGGATTGTGGAAAA TGTTTTAGTCGAAGCTCTCACCTTTATTCACATCAAAGAACCCACACTGGAGAGAAACCA TATGAGTGTCATGATTGTGGAAAATCTTTCAGCCAGAGTTCTGCCCTTATTGTGCATCAG AGGATACACACTGGAGAGAAACCATATGAATGCTGTCAGTGTGGGAAAGCCTTCATCCGG AAGAATGACCTCATTAAGCACCAGAGAATTCATGTTGGAGAAGAGACCTATAAATGTAAT CAATGTGGCATTATCTTCAGCCAGAACTCTCCATTTATAGTTCATCAAATAGCTCACACT GGAGAGCAGTTCTTAACATGCAATCAATGTGGGACAGCGCTTGTTAATACCTCTAACCTT ATTGGATACCAGACAAATCATATTAGAGAAAATGCTTAC
Cloned ORF protein sequence for pF1KB4076 Download>KIBB4076 573 aa MDAKSLTAWSRTLVTFKDVFVDFTREEWKLLDTAQQIVYRNVMLENYKNLVSLGYQLTKP DVILRLEKGEEPWLVEREIHQETHPDSETAFEIKSSVSSRSIFKDKQSCDIKMEGMARND LWYLSLEEVWKCRDQLDKYQENPERHLRQVAFTQKKVLTQERVSESGKYGGNCLLPAQLV LREYFHKRDSHTKSLKHDLVLNGHQDSCASNSNECGQTFCQNIHLIQFARTHTGDKSYKC PDNDNSLTHGSSLGISKGIHREKPYECKECGKFFSWRSNLTRHQLIHTGEKPYECKECGK SFSRSSHLIGHQKTHTGEEPYECKECGKSFSWFSHLVTHQRTHTGDKLYTCNQCGKSFVH SSRLIRHQRTHTGEKPYECPECGKSFRQSTHLILHQRTHVRVRPYECNECGKSYSQRSHL VVHHRIHTGLKPFECKDCGKCFSRSSHLYSHQRTHTGEKPYECHDCGKSFSQSSALIVHQ RIHTGEKPYECCQCGKAFIRKNDLIKHQRIHVGEETYKCNQCGIIFSQNSPFIVHQIAHT GEQFLTCNQCGTALVNTSNLIGYQTNHIRENAY
Nucleotide Sequence (with vector) for pF1KB4076 Download>pF1KB4076 4832 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGATGCTAAG TCACTAACTGCCTGGTCCCGGACACTGGTGACCTTCAAGGATGTATTTGTGGACTTCACC AGGGAGGAGTGGAAGCTGCTGGACACTGCTCAGCAGATCGTGTACAGAAATGTGATGCTG GAGAACTATAAGAACCTGGTTTCCTTGGGTTATCAGCTTACTAAGCCAGATGTGATCCTC CGGTTGGAGAAGGGAGAAGAGCCCTGGCTGGTGGAGAGAGAAATTCACCAAGAGACCCAT CCTGATTCAGAGACTGCATTTGAAATCAAATCATCAGTTTCCAGCAGGAGCATTTTTAAA GATAAGCAATCCTGTGACATTAAAATGGAAGGAATGGCAAGGAATGATCTCTGGTATTTG TCATTAGAAGAAGTCTGGAAATGTAGAGACCAGTTAGACAAGTATCAGGAAAACCCAGAG AGACATTTGAGGCAAGTGGCATTCACCCAAAAGAAAGTACTTACTCAGGAGAGAGTCTCT GAAAGTGGTAAATATGGGGGAAACTGTCTTCTTCCTGCTCAGCTAGTACTGAGAGAGTAT TTCCATAAACGTGACTCACATACTAAAAGTTTAAAACATGATTTAGTTCTTAATGGTCAT CAGGACAGTTGTGCAAGTAACAGTAATGAATGTGGTCAAACTTTCTGTCAAAACATTCAC CTTATTCAGTTTGCAAGAACTCACACAGGTGATAAATCCTACAAATGCCCTGATAATGAC AACTCTCTTACTCATGGTTCATCTCTTGGTATATCAAAGGGCATACATAGAGAGAAACCC TATGAATGTAAGGAATGTGGAAAATTCTTCAGCTGGCGCTCTAATCTTACTAGGCATCAG CTTATTCATACTGGAGAAAAACCCTATGAGTGTAAAGAATGTGGAAAGTCTTTCAGCCGG AGTTCTCACCTCATTGGACATCAAAAGACCCATACTGGTGAGGAACCCTATGAATGTAAA GAATGTGGAAAATCCTTCAGCTGGTTCTCTCACCTTGTTACTCATCAGAGAACTCATACA GGAGACAAACTGTACACATGTAATCAGTGTGGGAAATCTTTTGTTCATAGCTCTAGGCTT ATTAGACACCAGAGGACACATACTGGAGAGAAACCCTATGAATGTCCTGAATGTGGGAAA TCTTTCAGACAGAGCACACATCTCATTCTGCATCAGAGAACCCATGTGAGAGTGAGGCCC TATGAATGCAATGAATGTGGAAAGTCTTACAGCCAGAGATCTCACCTTGTTGTGCATCAT AGAATTCACACTGGACTAAAACCTTTTGAGTGTAAGGATTGTGGAAAATGTTTTAGTCGA AGCTCTCACCTTTATTCACATCAAAGAACCCACACTGGAGAGAAACCATATGAGTGTCAT GATTGTGGAAAATCTTTCAGCCAGAGTTCTGCCCTTATTGTGCATCAGAGGATACACACT GGAGAGAAACCATATGAATGCTGTCAGTGTGGGAAAGCCTTCATCCGGAAGAATGACCTC ATTAAGCACCAGAGAATTCATGTTGGAGAAGAGACCTATAAATGTAATCAATGTGGCATT ATCTTCAGCCAGAACTCTCCATTTATAGTTCATCAAATAGCTCACACTGGAGAGCAGTTC TTAACATGCAATCAATGTGGGACAGCGCTTGTTAATACCTCTAACCTTATTGGATACCAG ACAAATCATATTAGAGAAAATGCTTACGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT TTCTAAATACATTCAAATATGTATCCGCTCAT
more Linker info
