ZNF549 ORF clone FHC06055

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC06055

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Clone info.

Species

human

Clone Name

pFN21AB7880 Sequence (with vector) Restriction Map

Product ID

FHC06055

Flexi Clone PID

FXC06055

ORF Sequence

DNA sequence (1920 bp)
Protein sequence (640 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587450]

Gene

KIBB7880

Symbol

ZNF549

Description

zinc finger protein 549, transcript variant 1

Original Clone ID

cs00380

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1920 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 640 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS56106.1 1.3e-129 99.8 ZNF549 CCDS12952.1 1e-125 97.8 ZNF549 CCDS12980.1 2.3e-58 47.8 ZNF132 CCDS74350.1 1.3e-47 44.4 ZNF850 CCDS12498.1 4.4e-47 43.0 ZNF420 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001909 27 67 PF01352 Krueppel-associated box IPR007087 332 355 PF00096 Zinc finger IPR007087 445 467 PF00096 Zinc finger IPR007087 473 495 PF00096 Zinc finger IPR007087 613 635 PF00096 Zinc finger HMMSmart IPR001909 27 80 SM00349 Krueppel-associated box IPR015880 182 204 SM00355 Zinc finger IPR015880 222 241 SM00355 Zinc finger IPR015880 275 298 SM00355 Zinc finger IPR015880 304 326 SM00355 Zinc finger IPR015880 332 355 SM00355 Zinc finger IPR015880 361 383 SM00355 Zinc finger IPR015880 389 411 SM00355 Zinc finger IPR015880 417 439 SM00355 Zinc finger IPR015880 445 467 SM00355 Zinc finger IPR015880 473 495 SM00355 Zinc finger IPR015880 501 523 SM00355 Zinc finger IPR015880 529 551 SM00355 Zinc finger IPR015880 557 579 SM00355 Zinc finger IPR015880 585 607 SM00355 Zinc finger IPR015880 613 635 SM00355 Zinc finger ProfileScan IPR001909 27 140 PS50805 Krueppel-associated box IPR007087 217 246 PS50157 Zinc finger IPR007087 247 274 PS50157 Zinc finger IPR007087 275 303 PS50157 Zinc finger IPR007087 304 331 PS50157 Zinc finger IPR007087 332 360 PS50157 Zinc finger IPR007087 361 388 PS50157 Zinc finger IPR007087 389 416 PS50157 Zinc finger IPR007087 417 444 PS50157 Zinc finger IPR007087 445 472 PS50157 Zinc finger IPR007087 473 500 PS50157 Zinc finger IPR007087 501 528 PS50157 Zinc finger IPR007087 529 556 PS50157 Zinc finger IPR007087 557 584 PS50157 Zinc finger IPR007087 585 612 PS50157 Zinc finger IPR007087 613 640 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003424 706 604074 47.8 96.4 NP_001311072 693 314995 43.1 85.6 NP_001311078 693 314995 43.1 85.6 NP_001311081 693 314995 43.1 85.6 NP_001311070 693 314995 43.1 85.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7880 Download

>KIBB7880  1920 bp
ATGGCCGAGGCAGCGCTAGTGAATACGCCGCAGATTCCCATGGTAACAGAAGAGTTTGTG
AAACCATCACAGGGCCATGTGACCTTTGAGGATATTGCTGTGTACTTCTCCCAGGAGGAG
TGGGGCCTCCTTGATGAAGCTCAAAGGTGCCTGTATCATGATGTGATGCTGGAGAACTTT
TCGCTTATGGCCTCAGTAGGTTGTTTGCATGGAATAGAGGCTGAGGAGGCCCCTTCTGAG
CAGACTCTTTCTGCGCAAGGAGTGTCACAGGCCAGGACTCCAAAGCTAGGTCCTTCCATC
CCAAATGCTCATTCTTGTGAGATGTGTATCCTGGTCATGAAAGACATTTTGTACCTCAGT
GAGCATCAGGGGACACTTCCCTGGCAGAAACCTTATACGTCTGTGGCCAGTGGGAAATGG
TTTTCATTTGGTTCTAACCTGCAACAGCACCAGAACCAGGACAGTGGAGAGAAACACATC
AGAAAGGAGGAGAGCAGTGCCTTGCTTCTGAATAGCTGCAAAATTCCTCTGTCAGACAAT
CTTTTCCCATGCAAAGATGTTGAGAAGGATTTTCCAACCATCCTGGGCCTTCTCCAACAC
CAGACCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTCAACAAAGA
CGTTACAAATGTGAGCAAGTTTTCAATGAGAAAGTTCATGTTACTGAGCATCAGAGAGTC
CACACTGGAGAAAAAGCTTATAAGCGTAGGGAATATGGGAAATCCTTGAACTCTAAATAC
TTATTTGTTGAACACCAGAGAACCCATAATGCAGAAAAGCCTTATGTGTGCAATATATGT
GGGAAATCATTCCTCCATAAACAAACACTCGTTGGGCACCAGCAGAGAATTCACACTAGA
GAAAGGTCTTATGTGTGCATCGAATGTGGGAAATCCTTGAGCTCCAAATACTCACTTGTG
GAACACCAGAGAACCCATAATGGAGAAAAGCCTTATGTGTGCAATGTATGTGGGAAATCA
TTCCGCCACAAACAAACATTTGTTGGCCATCAGCAGAGAATCCACACTGGAGAGAGGCCT
TATGTGTGTATGGAATGTGGGAAATCTTTTATTCATTCCTATGACCGCATTCGACACCAG
AGAGTTCACACTGGAGAAGGGGCTTATCAGTGCAGTGAATGTGGGAAATCCTTCATATAC
AAACAGTCACTTCTTGATCACCATAGAATCCACACGGGAGAAAGGCCTTATGAGTGCAAA
GAATGTGGGAAGGCCTTCATTCACAAAAAAAGACTTCTTGAGCACCAGAGAATTCATACT
GGAGAAAAGCCTTATGTGTGCATCATATGTGGGAAATCATTTATCCGCTCGTCTGACTAC
ATGCGACACCAGAGAATTCACACTGGAGAAAGGGCTTATGAATGCAGTGACTGTGGGAAA
GCCTTCATCTCCAAACAAACACTTCTTAAGCATCACAAAATCCACACTAGAGAAAGGCCT
TATGAATGCAGTGAATGTGGAAAAGGCTTCTACCTTGAGGTTAAACTTCTTCAGCACCAA
AGAATCCATACTAGAGAACAACTTTGTGAGTGCAATGAATGTGGAAAAGTCTTCAGCCAC
CAAAAAAGACTTCTTGAGCACCAGAAAGTTCACACTGGCGAAAAGCCCTGTGAGTGCAGT
GAATGTGGGAAATGCTTTAGACACCGCACCAGCCTCATTCAACACCAGAAAGTTCACAGT
GGAGAGAGGCCTTATAACTGCACTGCATGTGAGAAGGCCTTTATCTATAAAAACAAACTT
GTTGAGCATCAGCGAATCCACACCGGAGAAAAGCCGTATGAATGTGGTAAATGTGGGAAA
GCCTTCAACAAAAGATATTCCCTTGTCAGGCACCAGAAGGTACATATAACAGAAGAGCCC

ORF Protein

Cloned ORF protein sequence for pFN21AB7880 Download

>KIBB7880  640 aa
MAEAALVNTPQIPMVTEEFVKPSQGHVTFEDIAVYFSQEEWGLLDEAQRCLYHDVMLENF
SLMASVGCLHGIEAEEAPSEQTLSAQGVSQARTPKLGPSIPNAHSCEMCILVMKDILYLS
EHQGTLPWQKPYTSVASGKWFSFGSNLQQHQNQDSGEKHIRKEESSALLLNSCKIPLSDN
LFPCKDVEKDFPTILGLLQHQTTHSRQEYAHRSRETFQQRRYKCEQVFNEKVHVTEHQRV
HTGEKAYKRREYGKSLNSKYLFVEHQRTHNAEKPYVCNICGKSFLHKQTLVGHQQRIHTR
ERSYVCIECGKSLSSKYSLVEHQRTHNGEKPYVCNVCGKSFRHKQTFVGHQQRIHTGERP
YVCMECGKSFIHSYDRIRHQRVHTGEGAYQCSECGKSFIYKQSLLDHHRIHTGERPYECK
ECGKAFIHKKRLLEHQRIHTGEKPYVCIICGKSFIRSSDYMRHQRIHTGERAYECSDCGK
AFISKQTLLKHHKIHTRERPYECSECGKGFYLEVKLLQHQRIHTREQLCECNECGKVFSH
QKRLLEHQKVHTGEKPCECSECGKCFRHRTSLIQHQKVHSGERPYNCTACEKAFIYKNKL
VEHQRIHTGEKPYECGKCGKAFNKRYSLVRHQKVHITEEP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7880 Download

>pFN21AB7880  6625 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCGAGGCAGCGCTAGTGAATACGCCGCAGAT
TCCCATGGTAACAGAAGAGTTTGTGAAACCATCACAGGGCCATGTGACCTTTGAGGATAT
TGCTGTGTACTTCTCCCAGGAGGAGTGGGGCCTCCTTGATGAAGCTCAAAGGTGCCTGTA
TCATGATGTGATGCTGGAGAACTTTTCGCTTATGGCCTCAGTAGGTTGTTTGCATGGAAT
AGAGGCTGAGGAGGCCCCTTCTGAGCAGACTCTTTCTGCGCAAGGAGTGTCACAGGCCAG
GACTCCAAAGCTAGGTCCTTCCATCCCAAATGCTCATTCTTGTGAGATGTGTATCCTGGT
CATGAAAGACATTTTGTACCTCAGTGAGCATCAGGGGACACTTCCCTGGCAGAAACCTTA
TACGTCTGTGGCCAGTGGGAAATGGTTTTCATTTGGTTCTAACCTGCAACAGCACCAGAA
CCAGGACAGTGGAGAGAAACACATCAGAAAGGAGGAGAGCAGTGCCTTGCTTCTGAATAG
CTGCAAAATTCCTCTGTCAGACAATCTTTTCCCATGCAAAGATGTTGAGAAGGATTTTCC
AACCATCCTGGGCCTTCTCCAACACCAGACCACCCACAGCAGACAAGAGTATGCACATAG
AAGCAGGGAGACCTTTCAACAAAGACGTTACAAATGTGAGCAAGTTTTCAATGAGAAAGT
TCATGTTACTGAGCATCAGAGAGTCCACACTGGAGAAAAAGCTTATAAGCGTAGGGAATA
TGGGAAATCCTTGAACTCTAAATACTTATTTGTTGAACACCAGAGAACCCATAATGCAGA
AAAGCCTTATGTGTGCAATATATGTGGGAAATCATTCCTCCATAAACAAACACTCGTTGG
GCACCAGCAGAGAATTCACACTAGAGAAAGGTCTTATGTGTGCATCGAATGTGGGAAATC
CTTGAGCTCCAAATACTCACTTGTGGAACACCAGAGAACCCATAATGGAGAAAAGCCTTA
TGTGTGCAATGTATGTGGGAAATCATTCCGCCACAAACAAACATTTGTTGGCCATCAGCA
GAGAATCCACACTGGAGAGAGGCCTTATGTGTGTATGGAATGTGGGAAATCTTTTATTCA
TTCCTATGACCGCATTCGACACCAGAGAGTTCACACTGGAGAAGGGGCTTATCAGTGCAG
TGAATGTGGGAAATCCTTCATATACAAACAGTCACTTCTTGATCACCATAGAATCCACAC
GGGAGAAAGGCCTTATGAGTGCAAAGAATGTGGGAAGGCCTTCATTCACAAAAAAAGACT
TCTTGAGCACCAGAGAATTCATACTGGAGAAAAGCCTTATGTGTGCATCATATGTGGGAA
ATCATTTATCCGCTCGTCTGACTACATGCGACACCAGAGAATTCACACTGGAGAAAGGGC
TTATGAATGCAGTGACTGTGGGAAAGCCTTCATCTCCAAACAAACACTTCTTAAGCATCA
CAAAATCCACACTAGAGAAAGGCCTTATGAATGCAGTGAATGTGGAAAAGGCTTCTACCT
TGAGGTTAAACTTCTTCAGCACCAAAGAATCCATACTAGAGAACAACTTTGTGAGTGCAA
TGAATGTGGAAAAGTCTTCAGCCACCAAAAAAGACTTCTTGAGCACCAGAAAGTTCACAC
TGGCGAAAAGCCCTGTGAGTGCAGTGAATGTGGGAAATGCTTTAGACACCGCACCAGCCT
CATTCAACACCAGAAAGTTCACAGTGGAGAGAGGCCTTATAACTGCACTGCATGTGAGAA
GGCCTTTATCTATAAAAACAAACTTGTTGAGCATCAGCGAATCCACACCGGAGAAAAGCC
GTATGAATGTGGTAAATGTGGGAAAGCCTTCAACAAAAGATATTCCCTTGTCAGGCACCA
GAAGGTACATATAACAGAAGAGCCCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT