FAM50A ORF clone FHC04972

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC04972

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Clone info.

Species

human

Clone Name

pFN21AE0135 Sequence (with vector) Restriction Map

Product ID

FHC04972

Flexi Clone PID

FXC04972

ORF Sequence

DNA sequence (1017 bp)
Protein sequence (339 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528133]

Gene

KIEE0135

Symbol

FAM50A

Alias : 9F, DXS9928E, HXC-26, HXC26, MRXSA, XAP5

Description

family with sequence similarity 50, member A

Original Clone ID

oc00835

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1017 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 339 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14751.1 2e-63 100.0 FAM50A CCDS4487.1 3.7e-31 74.3 FAM50B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007005 110 338 PF04921 XAP5 protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004690 339 300453 100.0 100.0 NP_036267 325 614686 74.3 100.0 XP_016866218 325 614686 74.3 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0135 Download

>KIEE0135  1017 bp
ATGGCTCAATACAAGGGCGCCGCGAGCGAGGCCGGCCGCGCCATGCACCTGATGAAGAAG
CGGGAGAAGCAGCGCGAGCAGATGGAGCAGATGAAGCAGCGCATCGCGGAGGAGAACATC
ATGAAATCCAACATTGACAAGAAGTTCTCTGCGCACTACGACGCGGTGGAGGCAGAGCTC
AAGTCCAGCACCGTGGGTCTCGTGACCCTGAATGACATGAAGGCCAAGCAGGAGGCTCTG
GTGAAGGAGCGGGAGAAGCAGCTGGCCAAGAAGGAGCAGTCCAAGGAGCTGCAGATGAAG
CTGGAGAAGCTTCGAGAGAAGGAGCGTAAGAAGGAAGCCAAGCGGAAGATCTCCAGCCTG
TCCTTCACCCTGGAGGAGGAAGAAGAGGGAGGCGAGGAGGAAGAGGAGGCGGCCATGTAT
GAGGAGGAGATGGAAAGGGAAGAGATCACCACGAAGAAGAGAAAACTGGGGAAGAACCCA
GACGTTGACACAAGCTTCTTGCCTGATCGAGACCGTGAGGAGGAGGAGAATCGGCTTCGG
GAAGAGCTGCGGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAGTGAGGAGATCGAG
ATCACCTTCAGCTACTGGGATGGCTCTGGGCACCGGCGGACAGTCAAGATGAGAAAGGGC
AACACCATGCAGCAGTTCCTGCAGAAGGCGCTCGAGATCCTTCGGAAAGACTTCAGTGAG
CTGAGGTCCGCAGGGGTGGAGCAGCTCATGTACATCAAGGAGGACTTGATCATCCCTCAC
CATCACAGCTTCTACGACTTCATCGTCACCAAGGCACGGGGGAAGAGTGGACCACTCTTC
AACTTTGATGTTCATGACGATGTGCGGTTGCTCAGTGACGCCACTGTGGAGAAGGATGAG
TCCCATGCAGGCAAGGTGGTGCTGAGGAGCTGGTACGAGAAGAACAAGCACATCTTTCCC
GCCAGCCGCTGGGAACCCTACGACCCTGAAAAGAAGTGGGACAAGTACACGATCCGC

ORF Protein

Cloned ORF protein sequence for pFN21AE0135 Download

>KIEE0135  339 aa
MAQYKGAASEAGRAMHLMKKREKQREQMEQMKQRIAEENIMKSNIDKKFSAHYDAVEAEL
KSSTVGLVTLNDMKAKQEALVKEREKQLAKKEQSKELQMKLEKLREKERKKEAKRKISSL
SFTLEEEEEGGEEEEEAAMYEEEMEREEITTKKRKLGKNPDVDTSFLPDRDREEEENRLR
EELRQEWEAKQEKIKSEEIEITFSYWDGSGHRRTVKMRKGNTMQQFLQKALEILRKDFSE
LRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDE
SHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYTIR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0135 Download

>pFN21AE0135  5722 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTCAATACAAGGGCGCCGCGAGCGAGGCCGG
CCGCGCCATGCACCTGATGAAGAAGCGGGAGAAGCAGCGCGAGCAGATGGAGCAGATGAA
GCAGCGCATCGCGGAGGAGAACATCATGAAATCCAACATTGACAAGAAGTTCTCTGCGCA
CTACGACGCGGTGGAGGCAGAGCTCAAGTCCAGCACCGTGGGTCTCGTGACCCTGAATGA
CATGAAGGCCAAGCAGGAGGCTCTGGTGAAGGAGCGGGAGAAGCAGCTGGCCAAGAAGGA
GCAGTCCAAGGAGCTGCAGATGAAGCTGGAGAAGCTTCGAGAGAAGGAGCGTAAGAAGGA
AGCCAAGCGGAAGATCTCCAGCCTGTCCTTCACCCTGGAGGAGGAAGAAGAGGGAGGCGA
GGAGGAAGAGGAGGCGGCCATGTATGAGGAGGAGATGGAAAGGGAAGAGATCACCACGAA
GAAGAGAAAACTGGGGAAGAACCCAGACGTTGACACAAGCTTCTTGCCTGATCGAGACCG
TGAGGAGGAGGAGAATCGGCTTCGGGAAGAGCTGCGGCAGGAGTGGGAAGCCAAGCAGGA
GAAGATCAAGAGTGAGGAGATCGAGATCACCTTCAGCTACTGGGATGGCTCTGGGCACCG
GCGGACAGTCAAGATGAGAAAGGGCAACACCATGCAGCAGTTCCTGCAGAAGGCGCTCGA
GATCCTTCGGAAAGACTTCAGTGAGCTGAGGTCCGCAGGGGTGGAGCAGCTCATGTACAT
CAAGGAGGACTTGATCATCCCTCACCATCACAGCTTCTACGACTTCATCGTCACCAAGGC
ACGGGGGAAGAGTGGACCACTCTTCAACTTTGATGTTCATGACGATGTGCGGTTGCTCAG
TGACGCCACTGTGGAGAAGGATGAGTCCCATGCAGGCAAGGTGGTGCTGAGGAGCTGGTA
CGAGAAGAACAAGCACATCTTTCCCGCCAGCCGCTGGGAACCCTACGACCCTGAAAAGAA
GTGGGACAAGTACACGATCCGCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT