C6orf47 ORF clone FHC03325

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03325

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Clone info.

Species

human

Clone Name

pFN21AB9814 Sequence (with vector) Restriction Map

Product ID

FHC03325

Flexi Clone PID

FXC03325

ORF Sequence

DNA sequence (882 bp)
Protein sequence (294 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464550]

Gene

KIBB9814

Symbol

C6orf47

Alias : D6S53E, G4, NG34

Description

chromosome 6 open reading frame 47

Original Clone ID

cp00383

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 882 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 294 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34399.1 1.8e-90 99.7 C6orf47 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition BlastProDom NULL 1 294 PD191299 NULL
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 181 NLTLHLLELLASALLALCSRPLR 203 PRIMARY 23 2 216 GLWLHGLLSFLAALHGLHAVLSL 238 PRIMARY 23 3 242 HPLHFACLFGLLQALVLAVSLR 263 PRIMARY 22 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9814 Download

>KIBB9814  882 bp
ATGTTCCTGCGACGGCTTGGTGGCTGGCTACCTCGCCCTTGGGGCCGCCGGAAACCAATG
AGGCCTGACCCGCCTTACCCAGAACCCAGACGGGTGGACAGCTCCTCGGAGAATTCAGGA
AGTGACTGGGATAGTGCCCCAGAAACCATGGAAGATGTGGGGCATCCCAAGACTAAGGAC
TCGGGGGCATTGAGGGTTTCTAGGGCTGCTTCCGAACCAAGCAAGGAGGAGCCCCAAGTT
GAGCAGCTAGGGAGCAAAAGAATGGATTCCCTCAAGTGGGACCAGCCTATCTCTAGCACT
CAAGAGTCTGGGAGACTGGAGGCTGGAGGGGCCAGTCCCAAACTCAGATGGGATCATGTG
GATTCAGGTGGCACCAGGAGACCAGGGGTGTCCCCTGAAGGGGGACTGAGCGTCCCTGGG
CCAGGAGCCCCATTGGAGAAACCTGGTAGGCGTGAGAAGCTGTTGGGCTGGCTGCGGGGG
GAACCAGGAGCTCCCTCCCGGTACTTGGGGGGCCCAGAAGAGTGTCTGCAGATCTCCACC
AACCTGACCCTGCATCTTCTGGAGCTGCTGGCCTCTGCCCTGCTGGCCCTGTGCTCACGA
CCACTGCGGGCAGCCTTGGACACACTGGGCCTGCGTGGACCGCTGGGCCTCTGGCTACAT
GGCCTACTGTCCTTCCTGGCTGCCCTGCATGGGCTCCATGCTGTTCTGAGCCTACTTACT
GCCCACCCTTTGCACTTCGCCTGCCTCTTTGGTCTCCTGCAGGCCTTGGTGCTGGCTGTC
AGCCTCCGGGAGCCCAATGGGGATGAGGCGGCCACTGACTGGGAGAGTGAGGGGTTGGAG
AGGGAAGGTGAGGAGCAGAGGGGAGACCCGGGAAAGGGGCTG

ORF Protein

Cloned ORF protein sequence for pFN21AB9814 Download

>KIBB9814  294 aa
MFLRRLGGWLPRPWGRRKPMRPDPPYPEPRRVDSSSENSGSDWDSAPETMEDVGHPKTKD
SGALRVSRAASEPSKEEPQVEQLGSKRMDSLKWDQPISSTQESGRLEAGGASPKLRWDHV
DSGGTRRPGVSPEGGLSVPGPGAPLEKPGRREKLLGWLRGEPGAPSRYLGGPEECLQIST
NLTLHLLELLASALLALCSRPLRAALDTLGLRGPLGLWLHGLLSFLAALHGLHAVLSLLT
AHPLHFACLFGLLQALVLAVSLREPNGDEAATDWESEGLEREGEEQRGDPGKGL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9814 Download

>pFN21AB9814  5587 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTTCCTGCGACGGCTTGGTGGCTGGCTACCTCG
CCCTTGGGGCCGCCGGAAACCAATGAGGCCTGACCCGCCTTACCCAGAACCCAGACGGGT
GGACAGCTCCTCGGAGAATTCAGGAAGTGACTGGGATAGTGCCCCAGAAACCATGGAAGA
TGTGGGGCATCCCAAGACTAAGGACTCGGGGGCATTGAGGGTTTCTAGGGCTGCTTCCGA
ACCAAGCAAGGAGGAGCCCCAAGTTGAGCAGCTAGGGAGCAAAAGAATGGATTCCCTCAA
GTGGGACCAGCCTATCTCTAGCACTCAAGAGTCTGGGAGACTGGAGGCTGGAGGGGCCAG
TCCCAAACTCAGATGGGATCATGTGGATTCAGGTGGCACCAGGAGACCAGGGGTGTCCCC
TGAAGGGGGACTGAGCGTCCCTGGGCCAGGAGCCCCATTGGAGAAACCTGGTAGGCGTGA
GAAGCTGTTGGGCTGGCTGCGGGGGGAACCAGGAGCTCCCTCCCGGTACTTGGGGGGCCC
AGAAGAGTGTCTGCAGATCTCCACCAACCTGACCCTGCATCTTCTGGAGCTGCTGGCCTC
TGCCCTGCTGGCCCTGTGCTCACGACCACTGCGGGCAGCCTTGGACACACTGGGCCTGCG
TGGACCGCTGGGCCTCTGGCTACATGGCCTACTGTCCTTCCTGGCTGCCCTGCATGGGCT
CCATGCTGTTCTGAGCCTACTTACTGCCCACCCTTTGCACTTCGCCTGCCTCTTTGGTCT
CCTGCAGGCCTTGGTGCTGGCTGTCAGCCTCCGGGAGCCCAATGGGGATGAGGCGGCCAC
TGACTGGGAGAGTGAGGGGTTGGAGAGGGAAGGTGAGGAGCAGAGGGGAGACCCGGGAAA
GGGGCTGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT