FOXS1 ORF clone FHC03186

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03186

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Clone info.

Species

human

Clone Name

pFN21AB9593 Sequence (with vector) Restriction Map

Product ID

FHC03186

Flexi Clone PID

FXC03186

ORF Sequence

DNA sequence (990 bp)
Protein sequence (330 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464535]

Gene

KIBB9593

Symbol

FOXS1

Alias : FKHL18, FREAC10

Description

forkhead box S1

Original Clone ID

cp00176

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 990 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 330 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13192.1 9.4e-80 100.0 FOXS1 CCDS4473.1 4.4e-18 44.6 FOXC1 CCDS10958.1 5.7e-17 37.7 FOXC2 CCDS30708.1 1.4e-15 40.2 FOXD2 CCDS32255.1 3e-15 38.4 FOXB1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001766 18 31 PR00053 Transcription factor IPR001766 39 56 PR00053 Transcription factor IPR001766 62 79 PR00053 Transcription factor HMMPfam IPR001766 18 113 PF00250 Transcription factor HMMSmart IPR001766 16 106 SM00339 Transcription factor ProfileScan IPR001766 18 112 PS50039 Transcription factor
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004109 330 602939 100.0 100.0 NP_001444 553 601090,601631,602482 44.6 83.3 NP_005242 501 153400,602402 37.7 93.9 NP_004465 495 602211 40.2 95.2 NP_036318 319 107250,601094,610256 39.5 86.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9593 Download

>KIBB9593  990 bp
ATGCAGCAGCAGCCTCTGCCCGGGCCTGGCGCCCCCACAACTGAGCCAACCAAGCCTCCC
TACAGCTACATCGCCCTTATTGCTATGGCCATCCAGAGCTCACCGGGGCAGCGGGCCACC
CTCAGTGGCATCTACCGCTACATCATGGGCCGATTCGCCTTCTACCGCCACAACCGGCCC
GGCTGGCAGAACAGCATCCGCCACAACCTGTCACTCAACGAGTGCTTTGTCAAGGTGCCC
CGCGATGACCGCAAGCCAGGCAAGGGCAGCTACTGGACGCTGGACCCTGACTGCCACGAC
ATGTTTGAGCACGGCAGCTTCCTACGCCGCCGCCGCCGCTTCACCCGGCAGACAGGTGCT
GAGGGCACCCGGGGCCCCGCCAAGGCACGCCGTGGACCCCTCAGGGCGACCAGCCAGGAC
CCAGGAGTCCCCAACGCCACGACCGGCAGGCAGTGCTCATTCCCACCAGAGCTGCCAGAT
CCCAAGGGCCTAAGCTTTGGGGGTCTGGTGGGGGCCATGCCAGCCAGTATGTGCCCAGCA
ACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCACGCCCAAGCCT
GCATGCCCAGGGGAGCTCCCCGTGGCCACCTCATCTTCCTCATGCCCAGCGTTTGGCTTT
CCTGCCGGCTTCTCAGAGGCTGAGAGTTTTAATAAGGCCCCTACGCCCGTCTTGTCCCCG
GAATCAGGCATCGGGAGCAGCTACCAGTGTCGGCTGCAGGCACTGAATTTTTGCATGGGG
GCTGACCCAGGCCTTGAGCACCTCTTGGCCTCAGCAGCCCCCTCCCCTGCACCACCCACC
CCTCCAGGCTCACTCCGGGCCCCACTGCCCCTGCCAACTGACCACAAGGAACCCTGGGTT
GCAGGTGGCTTCCCTGTCCAGGGAGGCTCCGGCTACCCATTGGGGCTGACCCCCTGCCTA
TACCGGACGCCAGGAATGTTCTTCTTTGAG

ORF Protein

Cloned ORF protein sequence for pFN21AB9593 Download

>KIBB9593  330 aa
MQQQPLPGPGAPTTEPTKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRP
GWQNSIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRFTRQTGA
EGTRGPAKARRGPLRATSQDPGVPNATTGRQCSFPPELPDPKGLSFGGLVGAMPASMCPA
TTDGRPRPPMEPKEISTPKPACPGELPVATSSSSCPAFGFPAGFSEAESFNKAPTPVLSP
ESGIGSSYQCRLQALNFCMGADPGLEHLLASAAPSPAPPTPPGSLRAPLPLPTDHKEPWV
AGGFPVQGGSGYPLGLTPCLYRTPGMFFFE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9593 Download

>pFN21AB9593  5695 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCAGCAGCAGCCTCTGCCCGGGCCTGGCGCCCC
CACAACTGAGCCAACCAAGCCTCCCTACAGCTACATCGCCCTTATTGCTATGGCCATCCA
GAGCTCACCGGGGCAGCGGGCCACCCTCAGTGGCATCTACCGCTACATCATGGGCCGATT
CGCCTTCTACCGCCACAACCGGCCCGGCTGGCAGAACAGCATCCGCCACAACCTGTCACT
CAACGAGTGCTTTGTCAAGGTGCCCCGCGATGACCGCAAGCCAGGCAAGGGCAGCTACTG
GACGCTGGACCCTGACTGCCACGACATGTTTGAGCACGGCAGCTTCCTACGCCGCCGCCG
CCGCTTCACCCGGCAGACAGGTGCTGAGGGCACCCGGGGCCCCGCCAAGGCACGCCGTGG
ACCCCTCAGGGCGACCAGCCAGGACCCAGGAGTCCCCAACGCCACGACCGGCAGGCAGTG
CTCATTCCCACCAGAGCTGCCAGATCCCAAGGGCCTAAGCTTTGGGGGTCTGGTGGGGGC
CATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCC
CAAAGAGATTTCCACGCCCAAGCCTGCATGCCCAGGGGAGCTCCCCGTGGCCACCTCATC
TTCCTCATGCCCAGCGTTTGGCTTTCCTGCCGGCTTCTCAGAGGCTGAGAGTTTTAATAA
GGCCCCTACGCCCGTCTTGTCCCCGGAATCAGGCATCGGGAGCAGCTACCAGTGTCGGCT
GCAGGCACTGAATTTTTGCATGGGGGCTGACCCAGGCCTTGAGCACCTCTTGGCCTCAGC
AGCCCCCTCCCCTGCACCACCCACCCCTCCAGGCTCACTCCGGGCCCCACTGCCCCTGCC
AACTGACCACAAGGAACCCTGGGTTGCAGGTGGCTTCCCTGTCCAGGGAGGCTCCGGCTA
CCCATTGGGGCTGACCCCCTGCCTATACCGGACGCCAGGAATGTTCTTCTTTGAGGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT