SOX8 ORF clone FHC02570

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Halotag ORF Clone FHC02570

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Clone info.

Species

human

Clone Name

pFN21AB7755 Sequence (with vector) Restriction Map

Product ID

FHC02570

Flexi Clone PID

FXC02570

ORF Sequence

DNA sequence (1338 bp)
Protein sequence (446 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464249]

Gene

KIBB7755

Symbol

SOX8

Description

SRY (sex determining region Y)-box 8

Original Clone ID

cs00255

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1338 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 446 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10428.1 4.8e-107 100.0 SOX8 CCDS11689.1 1.3e-36 48.5 SOX9 CCDS13964.1 1.3e-25 50.3 SOX10 CCDS6159.1 7.1e-12 34.6 SOX17 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022151 7 89 PF12444 Sox developmental protein N-terminal IPR000910 102 170 PF00505 High mobility group HMMSmart IPR000910 101 171 SM00398 High mobility group ProfileScan IPR000910 102 170 PS50118 High mobility group
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055402 446 605923 100.0 100.0 NP_000337 509 114290,608160,616425 48.5 90.6 NP_008872 466 602229,609136,611584,613266 50.3 99.8 NP_060889 384 137940,601618,607823 31.7 84.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7755 Download

>KIBB7755  1338 bp
ATGCTGGACATGAGCGAGGCCCGCTCCCAGCCGCCCTGCAGCCCGTCCGGCACCGCCAGC
TCCATGTCGCACGTGGAGGACTCGGACTCGGACGCGCCGCCGTCTCCCGCCGGCTCCGAG
GGCCTGGGCCGCGCGGGGGTCGCGGTGGGGGGCGCCCGGGGCGACCCGGCGGAGGCGGCG
GACGAGCGCTTCCCGGCCTGCATCCGCGACGCCGTGTCGCAGGTGCTCAAGGGCTACGAC
TGGAGTCTGGTGCCCATGCCGGTGCGCGGCGGCGGCGGCGGCGCGCTCAAAGCCAAGCCG
CATGTGAAGCGGCCCATGAACGCATTCATGGTGTGGGCGCAGGCGGCGCGCCGCAAGCTG
GCCGACCAGTACCCGCACCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGG
CGCTTGCTGAGCGAGAGCGAGAAGCGGCCCTTCGTGGAGGAGGCAGAGCGCCTTCGCGTG
CAGCACAAGAAGGACCACCCCGACTACAAGTACCAGCCACGGCGCAGGAAGAGCGCCAAA
GCCGGCCACAGCGACTCCGACTCGGGCGCGGAGCTGGGACCCCACCCTGGCGGCGGTGCC
GTGTACAAGGCTGAAGCAGGGCTTGGAGATGGGCACCACCATGGCGACCACACAGGGCAG
ACCCACGGGCCGCCCACCCCGCCCACCACCCCCAAGACGGAGCTGCAGCAGGCGGGCGCC
AAGCCGGAGCTGAAGCTGGAGGGACGCCGGCCGGTGGACAGCGGGCGCCAGAACATCGAC
TTCAGCAACGTGGACATCTCGGAGCTCAGCAGCGAGGTCATGGGCACCATGGACGCCTTC
GACGTCCACGAGTTCGACCAGTACCTGCCCCTGGGCGGCCCCGCCCCACCCGAGCCGGGC
CAGGCCTACGGGGGCGCCTACTTCCACGCCGGGGCGTCCCCCGTGTGGGCCCACAAGAGT
GCCCCGTCGGCCTCCGCGTCGCCCACCGAGACGGGTCCCCCACGGCCGCACATCAAGACG
GAGCAGCCGAGCCCCGGCCACTACGGCGACCAGCCCCGAGGCTCGCCCGACTACGGTTCC
TGCAGCGGCCAGTCCAGCGCCACCCCGGCCGCCCCCGCCGGCCCCTTCGCCGGCTCACAG
GGCGACTATGGCGACCTGCAGGCCTCCAGCTACTATGGTGCCTACCCTGGCTACGCACCC
GGCCTCTACCAGTACCCCTGCTTCCACTCGCCGCGCCGGCCCTACGCCTCACCCCTGCTC
AACGGCCTGGCCCTGCCGCCCGCCCACAGCCCCACCAGTCACTGGGACCAGCCGGTGTAC
ACCACCCTGACCAGGCCC

ORF Protein

Cloned ORF protein sequence for pFN21AB7755 Download

>KIBB7755  446 aa
MLDMSEARSQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGVAVGGARGDPAEAA
DERFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAARRKL
ADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAK
AGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGA
KPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPLGGPAPPEPG
QAYGGAYFHAGASPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQPRGSPDYGS
CSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSPRRPYASPLL
NGLALPPAHSPTSHWDQPVYTTLTRP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7755 Download

>pFN21AB7755  6043 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTGGACATGAGCGAGGCCCGCTCCCAGCCGCC
CTGCAGCCCGTCCGGCACCGCCAGCTCCATGTCGCACGTGGAGGACTCGGACTCGGACGC
GCCGCCGTCTCCCGCCGGCTCCGAGGGCCTGGGCCGCGCGGGGGTCGCGGTGGGGGGCGC
CCGGGGCGACCCGGCGGAGGCGGCGGACGAGCGCTTCCCGGCCTGCATCCGCGACGCCGT
GTCGCAGGTGCTCAAGGGCTACGACTGGAGTCTGGTGCCCATGCCGGTGCGCGGCGGCGG
CGGCGGCGCGCTCAAAGCCAAGCCGCATGTGAAGCGGCCCATGAACGCATTCATGGTGTG
GGCGCAGGCGGCGCGCCGCAAGCTGGCCGACCAGTACCCGCACCTGCACAACGCCGAGCT
CAGCAAGACGCTGGGCAAGCTGTGGCGCTTGCTGAGCGAGAGCGAGAAGCGGCCCTTCGT
GGAGGAGGCAGAGCGCCTTCGCGTGCAGCACAAGAAGGACCACCCCGACTACAAGTACCA
GCCACGGCGCAGGAAGAGCGCCAAAGCCGGCCACAGCGACTCCGACTCGGGCGCGGAGCT
GGGACCCCACCCTGGCGGCGGTGCCGTGTACAAGGCTGAAGCAGGGCTTGGAGATGGGCA
CCACCATGGCGACCACACAGGGCAGACCCACGGGCCGCCCACCCCGCCCACCACCCCCAA
GACGGAGCTGCAGCAGGCGGGCGCCAAGCCGGAGCTGAAGCTGGAGGGACGCCGGCCGGT
GGACAGCGGGCGCCAGAACATCGACTTCAGCAACGTGGACATCTCGGAGCTCAGCAGCGA
GGTCATGGGCACCATGGACGCCTTCGACGTCCACGAGTTCGACCAGTACCTGCCCCTGGG
CGGCCCCGCCCCACCCGAGCCGGGCCAGGCCTACGGGGGCGCCTACTTCCACGCCGGGGC
GTCCCCCGTGTGGGCCCACAAGAGTGCCCCGTCGGCCTCCGCGTCGCCCACCGAGACGGG
TCCCCCACGGCCGCACATCAAGACGGAGCAGCCGAGCCCCGGCCACTACGGCGACCAGCC
CCGAGGCTCGCCCGACTACGGTTCCTGCAGCGGCCAGTCCAGCGCCACCCCGGCCGCCCC
CGCCGGCCCCTTCGCCGGCTCACAGGGCGACTATGGCGACCTGCAGGCCTCCAGCTACTA
TGGTGCCTACCCTGGCTACGCACCCGGCCTCTACCAGTACCCCTGCTTCCACTCGCCGCG
CCGGCCCTACGCCTCACCCCTGCTCAACGGCCTGGCCCTGCCGCCCGCCCACAGCCCCAC
CAGTCACTGGGACCAGCCGGTGTACACCACCCTGACCAGGCCCGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT