RTF1 ORF clone FHC00479

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC00479

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Clone info.

Species

human

Clone Name

pFN21ASDA0252 Sequence (with vector) Restriction Map

Product ID

FHC00479

Flexi Clone PID

FXC00479

ORF Sequence

DNA sequence (2010 bp)
Protein sequence (670 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383821]

Gene

KIAA0252

Symbol

RTF1

Alias : GTL7, KIAA0252

Description

Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)

Original Clone ID

ha07048s1

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2010 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 670 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32200.2 4.9e-110 100.0 RTF1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004343 317 419 PF03126 Plus-3 HMMSmart IPR018144 313 421 SM00719 Plus-3 domain ProfileScan IPR004343 313 444 PS51360 Plus-3
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055953 710 611633 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA0252 Download

>KIAA0252  2010 bp
ATGGTAAAGAAGCGGAAAGGCCGCGTCGTGATCGACTCGGACACAGAGGACAGCGGCAGC
GACGAGAACCTGGATCAGGAGCTCTTGTCCCTGGCAAAGCGAAAGCGCAGTGACTCTGAG
GAGAAGGAGCCGCCTGTGAGTCAGCCTGCAGCCTCGTCAGACTCGGAGACGTCTGACAGT
GACGATGAGTGGACATTTGGGAGCAATAAAAATAAGAAGAAAGGAAAAGCCAGAAAAATA
GAGAAGAAAGGAACCATGAAGAAACAGGCCAACAAAACTGCCTCCTCAGGCAGTTCAGAC
AAAGACAGTTCAGCTGAGAGCTCAGCCCCTGAGGAAGGTGAAGTGTCAGACTCTGACAGC
AACAGCTCCTCTTCCAGTTCAGATTCAGACTCTTCCTCAGAAGATGAAGAGTTCCATGAT
GGCTATGGAGAAGACCTCATGGGAGATGAGGAAGACAGGGCCCGTCTGGAACAGATGACA
GAGAAAGAGAGAGAGCAAGAACTGTTCAATCGCATAGAGAAGAGGGAGGTGTTGAAAAGA
AGATTTGAAATCAAGAAAAAACTAAAAACAGCCAAAAAGAAAGAAAAGAAAGAAAAGAAG
AAAAAGCAAGAAGAGGAGCAAGAAAAGAAAAAACTGACACAGATTCAAGAATCTCAGGTA
ACATCCCACAACAAGGAACGGCGTTCCAAGCGGGATGAGAAACTAGACAAGAAATCTCAA
GCCATGGAGGAGCTAAAAGCAGAGCGAGAAAAACGAAAGAACAGAACAGCTGAGCTCCTT
GCCAAAAAACAGCCATTAAAAACCAGTGAGGTCTACTCTGATGATGAAGAGGAGGAAGAG
GATGACAAATCCAGTGAAAAGTCAGACCGCTCATCACGAACATCATCGTCTGATGAAGAA
GAGGAGAAAGAAGAGATCCCTCCCAAATCCCAACCAGTTTCCTTACCTGAAGAATTGAAT
CGGGTTCGATTATCACGGCATAAGCTAGAACGCTGGTGTCACATGCCCTTCTTTGCTAAA
ACTGTCACAGGATGTTTTGTGCGGATTGGCATCGGAAACCACAACAGCAAACCAGTTTAC
CGGGTCGCTGAGATTACGGGTGTTGTGGAAACTGCCAAAGTTTACCAACTAGGTGGCACC
AGAACAAACAAAGGGCTGCAACTACGGCATGGCAATGACCAACGCGTGTTCCGTTTAGAG
TTTGTCTCAAACCAAGAATTCACCGAAAGTGAGTTTATGAAGTGGAAAGAAGCGATGTTC
TCTGCTGGCATGCAGTTGCCCACTCTAGATGAAATCAATAAAAAGGAATTATCTATTAAA
GAAGCTCTTAATTATAAATTCAATGATCAGGACATTGAAGAGATTGTAAAAGAGAAAGAA
AGGTTCAGAAAAGCTCCACCCAACTACGCTATGAAGAAGACTCAGCTACTGAAGGAAAAG
GCCATGGCTGAGGACCTGGGGGATCAGGACAAGGCCAAACAAATCCAAGATCAACTGAAT
GAGCTGGAGGAACGGGCAGAGGCCCTGGACCGCCAGCGGACCAAGAACATATCCGCTATC
AGTTACATCAACCAGCGGAACCGGGAGTGGAACATTGTAGAGTCTGAGAAGGCCCTTGTG
GCTGAAAGTCACAACATGAAAAACCAACAGATGGATCCCTTTACTCGGCGGCAGTGCAAG
CCTACCATCGTTTCTAATTCCAGAGACCCAGCTGTTCAAGCTGCCATCTTGGCCCAGCTG
AATGCAAAATACGGTTCTGGAGTGTTACCAGATGCTCCAAAGGAAATGAGCAAGGGTCAA
GGCAAAGATAAAGATTTGAATTCTAAGTCAGCCAGTGACCTCTCAGAAGATCTGTTCAAA
GTACACGATTTTGATGTGAAGATTGACTTACAAGTTCCCAGCTCAGAGTCAAAGGCTTTA
GCCATCACCTCCAAGGCTCCGCCAGCCAAGGATGGGGCTCCAAGGAGATCTCTGAACTTG
GAAGACTACAAAAAACGACGAGGGCTTATT

ORF Protein

Cloned ORF protein sequence for pFN21ASDA0252 Download

>KIAA0252  670 aa
MVKKRKGRVVIDSDTEDSGSDENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDS
DDEWTFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDS
NSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKR
RFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQ
AMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEE
EEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVY
RVAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMF
SAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEK
AMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALV
AESHNMKNQQMDPFTRRQCKPTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQ
GKDKDLNSKSASDLSEDLFKVHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNL
EDYKKRRGLI

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA0252 Download

>pFN21ASDA0252  6739 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGTAAAGAAGCGGAA
AGGCCGCGTCGTGATCGACTCGGACACAGAGGACAGCGGCAGCGACGAGAACCTGGATCA
GGAGCTCTTGTCCCTGGCAAAGCGAAAGCGCAGTGACTCTGAGGAGAAGGAGCCGCCTGT
GAGTCAGCCTGCAGCCTCGTCAGACTCGGAGACGTCTGACAGTGACGATGAGTGGACATT
TGGGAGCAATAAAAATAAGAAGAAAGGAAAAGCCAGAAAAATAGAGAAGAAAGGAACCAT
GAAGAAACAGGCCAACAAAACTGCCTCCTCAGGCAGTTCAGACAAAGACAGTTCAGCTGA
GAGCTCAGCCCCTGAGGAAGGTGAAGTGTCAGACTCTGACAGCAACAGCTCCTCTTCCAG
TTCAGATTCAGACTCTTCCTCAGAAGATGAAGAGTTCCATGATGGCTATGGAGAAGACCT
CATGGGAGATGAGGAAGACAGGGCCCGTCTGGAACAGATGACAGAGAAAGAGAGAGAGCA
AGAACTGTTCAATCGCATAGAGAAGAGGGAGGTGTTGAAAAGAAGATTTGAAATCAAGAA
AAAACTAAAAACAGCCAAAAAGAAAGAAAAGAAAGAAAAGAAGAAAAAGCAAGAAGAGGA
GCAAGAAAAGAAAAAACTGACACAGATTCAAGAATCTCAGGTAACATCCCACAACAAGGA
ACGGCGTTCCAAGCGGGATGAGAAACTAGACAAGAAATCTCAAGCCATGGAGGAGCTAAA
AGCAGAGCGAGAAAAACGAAAGAACAGAACAGCTGAGCTCCTTGCCAAAAAACAGCCATT
AAAAACCAGTGAGGTCTACTCTGATGATGAAGAGGAGGAAGAGGATGACAAATCCAGTGA
AAAGTCAGACCGCTCATCACGAACATCATCGTCTGATGAAGAAGAGGAGAAAGAAGAGAT
CCCTCCCAAATCCCAACCAGTTTCCTTACCTGAAGAATTGAATCGGGTTCGATTATCACG
GCATAAGCTAGAACGCTGGTGTCACATGCCCTTCTTTGCTAAAACTGTCACAGGATGTTT
TGTGCGGATTGGCATCGGAAACCACAACAGCAAACCAGTTTACCGGGTCGCTGAGATTAC
GGGTGTTGTGGAAACTGCCAAAGTTTACCAACTAGGTGGCACCAGAACAAACAAAGGGCT
GCAACTACGGCATGGCAATGACCAACGCGTGTTCCGTTTAGAGTTTGTCTCAAACCAAGA
ATTCACCGAAAGTGAGTTTATGAAGTGGAAAGAAGCGATGTTCTCTGCTGGCATGCAGTT
GCCCACTCTAGATGAAATCAATAAAAAGGAATTATCTATTAAAGAAGCTCTTAATTATAA
ATTCAATGATCAGGACATTGAAGAGATTGTAAAAGAGAAAGAAAGGTTCAGAAAAGCTCC
ACCCAACTACGCTATGAAGAAGACTCAGCTACTGAAGGAAAAGGCCATGGCTGAGGACCT
GGGGGATCAGGACAAGGCCAAACAAATCCAAGATCAACTGAATGAGCTGGAGGAACGGGC
AGAGGCCCTGGACCGCCAGCGGACCAAGAACATATCCGCTATCAGTTACATCAACCAGCG
GAACCGGGAGTGGAACATTGTAGAGTCTGAGAAGGCCCTTGTGGCTGAAAGTCACAACAT
GAAAAACCAACAGATGGATCCCTTTACTCGGCGGCAGTGCAAGCCTACCATCGTTTCTAA
TTCCAGAGACCCAGCTGTTCAAGCTGCCATCTTGGCCCAGCTGAATGCAAAATACGGTTC
TGGAGTGTTACCAGATGCTCCAAAGGAAATGAGCAAGGGTCAAGGCAAAGATAAAGATTT
GAATTCTAAGTCAGCCAGTGACCTCTCAGAAGATCTGTTCAAAGTACACGATTTTGATGT
GAAGATTGACTTACAAGTTCCCAGCTCAGAGTCAAAGGCTTTAGCCATCACCTCCAAGGC
TCCGCCAGCCAAGGATGGGGCTCCAAGGAGATCTCTGAACTTGGAAGACTACAAAAAACG
ACGAGGGCTTATTTACGTAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT