Gene/Protein Characteristic Table for KIAA0086
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Product ID ORK00403
Accession No D42045
Description DNA cross-link repair 1A, transcript variant 2
Clone name ha03611
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (4468 bp)
Predicted protein sequence (1044 aa)
Flexi ORF Clone FXC00403
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0086 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 4468 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 427 bp
Genome contig ID gi89161187r_115484474
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 10 r 115584474 115603849 9 100.0 Perfect prediction
Features of the protein sequence

Length: 1044 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAH13124 0 100.0 DNA cross-link ...
Homo sapiens
Q6PJP8 0 99.9 DNA cross-link ...
Homo sapiens
AAH62582 0 99.8 DNA cross-link ...
Homo sapiens
XP_508045 0 98.8 DNA-crosslink r...
Pan troglodytes
XP_001090942 0 93.7 DNA-crosslink r...
Macaca mulatta
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR011084 923 1021 PF07522 DNA repair metallo-beta-lactamase
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 10
Experimental conditions
Panel name Genebridge 4
PCR product length 177 (1.6k) bp
PCR conditions 95 °C15 sec62 °C120 sec30 cycles
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