Gene/Protein Characteristic Table for KIAA0016
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Product ID ORK00364
Accession No D13641
Description translocase of outer mitochondrial membrane 20 homolog (yeast)
Clone name ha00489
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (3259 bp)
Predicted protein sequence (178 aa)
Flexi ORF Clone FXC00364
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0016 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 3259 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 2720 bp
Genome contig ID gi89161185r_233239283
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 1 r 233339283 233358754 5 99.1 Perfect prediction
Features of the protein sequence

Length: 178 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q15388 3.4e-55 100.0 Mitochondrial i...
Homo sapiens
CAG32999 6.3e-55 99.3 TOMM20 [Homo sa...
Homo sapiens
Q9DCC8 6.3e-55 99.3 Mitochondrial i...
Mus musculus
ABW03358 1.2e-54 99.3 translocase of ...
synthetic construct
XP_001491687 1.2e-54 99.3 similar to Mito...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR002056 53 70 PR00351 Protein import receptor MAS20
IPR002056 71 83 PR00351 Protein import receptor MAS20
HMMPfam IPR002056 30 175 PF02064 Protein import receptor MAS20
HMMTigr IPR002056 34 160 TIGR00985 Protein import receptor MAS20
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 1
Experimental conditions
Panel name Genebridge 4
PCR product length 187 bp
PCR conditions 95 °C15 sec58 °C60 sec30 cycles
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