Gene/Protein Characteristic Table for KIAA1114
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Product ID ORK01150
Accession No AB029037
Description trophinin, transcript variant 6
Clone name fj15925
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4614 bp)
Predicted protein sequence (1458 aa)
Flexi ORF Clone FXC01150
Source Human fetal brain
Rouge ID mKIAA1114 by Kazusa Mouse cDNA Project
Note We replaced hj06833, former representative clones for KIAA1114 with fj15925. (2004/1/10)
Features of the cloned cDNA sequence
Description

Length: 4614 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 237 bp
Genome contig ID gi89161218f_54865359
PolyA signal sequence
(ATTAAA,-17)
+----*----+----*----+----*----+----
TTTTGGTATCAGAGTTACATTAAATTTGCAAAATG
Flanking genome sequence
(109230 - 109279)
----+----*----+----*----+----*----+----*----+----*
AATTGGAGTTTTTTCTGTCTTTTAATGTGCTTAGGTAGTTGTGGAGTGGC
Features of the protein sequence
Description

Length: 1458 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q12816 0 100.0 Trophinin; MAGE...
Homo sapiens
EAW93202 0 100.0 trophinin, isof...
Homo sapiens
EAW93206 0 100.0 trophinin, isof...
Homo sapiens
CAM26848 0 99.9 trophinin [Homo...
Homo sapiens
BAG59020 0 99.7 unnamed protein...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB058762 4.2e-41 41.8 KIAA1859
AB046807 8.6e-18 25.5 KIAA1587
AB014518 5.1e-09 28.1 KIAA0618
D14689 1.4e-06 28.1 KIAA0023
AB107354 0.0008 24.5 KIAA2032
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR002190 478 647 PF01454 MAGE protein
ProfileScan IPR002190 471 669 PS50838 MAGE protein
Experimental conditions
Primer_f TTCCCCATGTTTACAGATACC
Primer_r CCATAACTGCCTTGACTGCTG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. X
Experimental conditions
Panel name GeneBridge 4
Primer_f TTCCCCATGTTTACAGATACC
Primer_r CCATAACTGCCTTGACTGCTG
PCR product length 105 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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