Database
Plants related
Plant GARDEN
A database of integrated genomic information of plants
Kazusa Genome DataBase
A portal website for the plant genome databases generated by KDRI
Kazusa Transcript DataBase
- Chlamydomonas reinhardtii EST Index
- Lotus japonicus EST Index
- Arabidopsis thaliana EST index
- Porphyra yezoensis EST Index
- Trifolium pratense EST Index
Kazusa Marker DataBase
A database for DNA markers and genetic/physical maps of 13 plant species analyzed at KDRI
Metabolome
- KomicMarket A database for MS spectral information of metabolites
- MassBase An MST database of metabolites
- MS-MS Fragment Viewer An MS/MS spectral database for flavonoid compounds
- KaPPA-View A metabolic pathway database of Arabidopsis thaliana
- Metabolonote A metadata database for experimental details of metabolome analysis
Others
- KATANA An integrated database of Arabidopsis thaliana
- TACWeb A database of vectors for transformation-competent bacterial artificial chromosome (TAC) for Arabidopsis thaliana
Software
- Genotype Matrix Mapping A database of computer programs for detecting QTL interactions
- Hayai-Annotation A software package for an ultra-fast and comprehensive gene annotation in plants using USEARCH against UniProtKB
Human related
cDNA project
- HUGE A database of human unidentified genes encoding large proteins
- ROUGE A database of human unidentified genes encoding large proteins
- CREATE portal A portal site for the Collaboration of Regional Entities for the Advancement of Technological Excellence.
- KOP A database of human protein-expressing clones (Flexi ORF clones）