AV549650 ( RZ100b10R )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV549650  RZ100b10R
         (419 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit n...   201   2e-50
UniRef100_B9N7D1 Predicted protein n=1 Tax=Populus trichocarpa R...   159   9e-38
UniRef100_A7PEL2 Chromosome chr11 scaffold_13, whole genome shot...   155   1e-36
UniRef100_C6SVA4 Putative uncharacterized protein n=1 Tax=Glycin...   140   3e-32
UniRef100_C6SXZ4 Putative uncharacterized protein n=1 Tax=Glycin...   138   2e-31
UniRef100_B9RKM1 DNA-directed RNA polymerase II, putative n=1 Ta...   135   1e-30
UniRef100_B3TLL2 DNA-directed RNA polymerases II 24 kDa polypept...   130   5e-29
UniRef100_A9RWG5 Predicted protein n=1 Tax=Physcomitrella patens...   129   1e-28
UniRef100_A9RKG6 Predicted protein n=1 Tax=Physcomitrella patens...   126   7e-28
UniRef100_B8LR68 Putative uncharacterized protein n=1 Tax=Picea ...   123   6e-27
UniRef100_A9NTD1 Putative uncharacterized protein n=1 Tax=Picea ...   123   6e-27
UniRef100_B9ETS9 Putative uncharacterized protein n=1 Tax=Oryza ...   114   3e-24
UniRef100_Q5VQW7 Os01g0805800 protein n=2 Tax=Oryza sativa RepID...   114   3e-24
UniRef100_B4FU06 DNA-directed RNA polymerases II 24 kDa polypept...   112   1e-23
UniRef100_Q7XUF8 OJ991113_30.8 protein n=1 Tax=Oryza sativa Japo...   108   2e-22
UniRef100_B7EQI7 cDNA clone:J023098I05, full insert sequence n=1...   108   2e-22
UniRef100_A3AV22 Putative uncharacterized protein n=2 Tax=Oryza ...   108   2e-22
UniRef100_B4FGM1 Putative uncharacterized protein n=1 Tax=Zea ma...   106   9e-22
UniRef100_C1MXV4 Predicted protein n=1 Tax=Micromonas pusilla CC...   102   2e-20
UniRef100_UPI000194DF40 PREDICTED: polymerase (RNA) II (DNA dire...   101   2e-20
UniRef100_B5FX59 Putative DNA directed RNA polymerase II polypep...   101   2e-20
UniRef100_Q6DEG5 Polymerase (RNA) II (DNA directed) polypeptide ...   101   2e-20
UniRef100_C1C3Q7 DNA-directed RNA polymerases I, II, and III sub...   101   2e-20
UniRef100_Q4S3C9 Chromosome 1 SCAF14751, whole genome shotgun se...   101   3e-20
UniRef100_C3KI95 DNA-directed RNA polymerases I, II, and III sub...   101   3e-20
UniRef100_C1BIS3 DNA-directed RNA polymerase II 23 kDa polypepti...   101   3e-20
UniRef100_Q28HF5 Polymerase (RNA) II (DNA directed) polypeptide ...   100   4e-20
UniRef100_A6N9W6 25-kDa subunit RNA polymerase n=1 Tax=Ornithodo...   100   4e-20
UniRef100_A8J805 DNA-directed RNA polymerase II, 23 kDa polypept...   100   5e-20
UniRef100_UPI000186E78B DNA-directed RNA polymerase II 23 kDa po...   100   7e-20
UniRef100_UPI00005A3E0E PREDICTED: similar to DNA directed RNA p...   100   7e-20
UniRef100_UPI0000EB19D6 DNA-directed RNA polymerases I, II, and ...   100   7e-20
UniRef100_UPI00005A3E0F PREDICTED: similar to DNA-directed RNA p...   100   7e-20
UniRef100_Q8R0H0 Polr2e protein n=1 Tax=Mus musculus RepID=Q8R0H...   100   7e-20
UniRef100_Q5R587 DNA-directed RNA polymerases I, II, and III sub...   100   7e-20
UniRef100_Q80UW8 DNA-directed RNA polymerases I, II, and III sub...   100   7e-20
UniRef100_P19388 DNA-directed RNA polymerases I, II, and III sub...   100   7e-20
UniRef100_UPI000051A7F2 PREDICTED: similar to Rpb5 CG11979-PA n=...   100   9e-20
UniRef100_UPI00003C0CAC PREDICTED: similar to Rpb5 CG11979-PA n=...   100   9e-20
UniRef100_C1BZT4 DNA-directed RNA polymerases I, II, and III sub...   100   9e-20
UniRef100_UPI00015B5456 PREDICTED: similar to ENSANGP00000006082...    99   1e-19
UniRef100_B5X8S7 DNA-directed RNA polymerases I, II, and III sub...    99   1e-19
UniRef100_UPI0000D9E960 PREDICTED: similar to DNA directed RNA p...    99   1e-19
UniRef100_B0X7A5 DNA-directed RNA polymerase II 23 kDa polypepti...    99   1e-19
UniRef100_B5XGU7 DNA-directed RNA polymerases I, II, and III sub...    98   2e-19
UniRef100_B5X957 DNA-directed RNA polymerases I, II, and III sub...    98   2e-19
UniRef100_C3ZQF0 Putative uncharacterized protein n=1 Tax=Branch...    98   2e-19
UniRef100_B4MK71 GK20665 n=1 Tax=Drosophila willistoni RepID=B4M...    98   2e-19
UniRef100_B4KPZ3 GI19761 n=2 Tax=Drosophila RepID=B4KPZ3_DROMO         98   2e-19
UniRef100_B4J892 GH20567 n=1 Tax=Drosophila grimshawi RepID=B4J8...    98   2e-19
UniRef100_Q7JZF5 Rpb5 n=5 Tax=melanogaster subgroup RepID=Q7JZF5...    98   2e-19
UniRef100_B3MEP0 GF12445 n=1 Tax=Drosophila ananassae RepID=B3ME...    98   2e-19
UniRef100_UPI000180C3C9 PREDICTED: similar to 25-kDa subunit RNA...    97   4e-19
UniRef100_B7T1F2 RNA polymerase II (Fragment) n=1 Tax=Oreochromi...    97   4e-19
UniRef100_A4RWP8 Predicted protein n=1 Tax=Ostreococcus lucimari...    97   4e-19
UniRef100_B5DLL1 GA22602 n=2 Tax=pseudoobscura subgroup RepID=B5...    97   4e-19
UniRef100_UPI0000D56A05 PREDICTED: similar to AGAP010064-PA n=1 ...    97   6e-19
UniRef100_UPI0000587A08 PREDICTED: similar to RPB5 n=1 Tax=Stron...    97   7e-19
UniRef100_Q01A87 RNA polymerase I, II and III 24.3 kDa subunit (...    96   9e-19
UniRef100_C4WY48 ACYPI000388 protein n=1 Tax=Acyrthosiphon pisum...    96   2e-18
UniRef100_UPI000056951D UPI000056951D related cluster n=1 Tax=Da...    95   2e-18
UniRef100_Q2T9T3 DNA-directed RNA polymerases I, II, and III sub...    95   3e-18
UniRef100_B4GBQ3 GL10501 n=1 Tax=Drosophila persimilis RepID=B4G...    94   4e-18
UniRef100_B5E0K0 GA24393 n=1 Tax=Drosophila pseudoobscura pseudo...    94   6e-18
UniRef100_C1EDR8 Predicted protein n=1 Tax=Micromonas sp. RCC299...    92   2e-17
UniRef100_Q9N5K2 DNA-directed RNA polymerases I, II, and III sub...    91   5e-17
UniRef100_Q5DDM1 SJCHGC05306 protein n=1 Tax=Schistosoma japonic...    90   9e-17
UniRef100_UPI0000E24E5A PREDICTED: similar to Polymerase (RNA) I...    89   2e-16
UniRef100_C1C1G9 DNA-directed RNA polymerases I, II, and III sub...    89   2e-16
UniRef100_C6K8L9 RNA polymerase II B subunit n=1 Tax=Caenorhabdi...    88   3e-16
UniRef100_A8XGH1 C. briggsae CBR-RPB-5 protein n=1 Tax=Caenorhab...    88   3e-16
UniRef100_B8C1Q1 RPB5,-like protein to RNA polymerase i n=1 Tax=...    87   6e-16
UniRef100_C4PZ68 DNA-directed RNA polymerase II, putative (Fragm...    87   6e-16
UniRef100_C1BRK0 DNA-directed RNA polymerases I, II, and III sub...    87   7e-16
UniRef100_B5DLP1 GA22581 n=1 Tax=Drosophila pseudoobscura pseudo...    87   7e-16
UniRef100_B3S3Q9 Putative uncharacterized protein n=1 Tax=Tricho...    87   7e-16
UniRef100_B7FSY0 Predicted protein n=1 Tax=Phaeodactylum tricorn...    84   4e-15
UniRef100_C5KHW9 DNA-directed RNA polymerases II 24 kDa polypept...    81   3e-14
UniRef100_C5KB88 DNA-directed RNA polymerases II 24 kDa polypept...    81   4e-14
UniRef100_A9SWJ6 Predicted protein n=1 Tax=Physcomitrella patens...    78   3e-13
UniRef100_A7RT72 Predicted protein n=1 Tax=Nematostella vectensi...    77   6e-13
UniRef100_Q54EH2 DNA-directed RNA polymerases I, II, and III sub...    75   3e-12
UniRef100_Q9LUR5 RNA polymerase-like protein n=1 Tax=Arabidopsis...    74   4e-12
UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-l...    72   2e-11
UniRef100_B4GWF6 GL16452 n=1 Tax=Drosophila persimilis RepID=B4G...    72   2e-11
UniRef100_B5LZ31 RNA polymerase II (Fragment) n=1 Tax=Psetta max...    70   6e-11
UniRef100_A8NU15 Putative uncharacterized protein n=1 Tax=Coprin...    68   3e-10
UniRef100_Q8CI23 Polymerase (RNA) II (DNA directed) polypeptide ...    68   4e-10
UniRef100_B0D9Y7 Predicted protein n=1 Tax=Laccaria bicolor S238...    67   8e-10
UniRef100_B3L6X3 DNA-directed RNA polymerase 2, putative n=1 Tax...    64   4e-09
UniRef100_B6KFE7 DNA-directed RNA polymerases I, II, and III sub...    64   5e-09
UniRef100_A9UR01 Predicted protein n=1 Tax=Monosiga brevicollis ...    64   5e-09
UniRef100_C5DNB3 KLTH0G15598p n=1 Tax=Lachancea thermotolerans C...    64   7e-09
UniRef100_A7TEH4 Putative uncharacterized protein n=1 Tax=Vander...    63   9e-09
UniRef100_A5K2Q3 DNA-directed RNA polymerase II 23 kDa polypepti...    62   2e-08
UniRef100_Q4P7S7 Putative uncharacterized protein n=1 Tax=Ustila...    62   2e-08
UniRef100_C5DR69 ZYRO0B06006p n=1 Tax=Zygosaccharomyces rouxii C...    62   2e-08
UniRef100_Q6CJ62 DNA-directed RNA polymerases I, II, and III sub...    62   2e-08
UniRef100_Q4N141 DNA-directed RNA polymerase II, putative n=1 Ta...    62   3e-08
UniRef100_Q6FQA6 DNA-directed RNA polymerases I, II, and III sub...    61   4e-08
UniRef100_Q4YN15 DNA-directed RNA polymerase 2, putative (Fragme...    60   6e-08
UniRef100_C4LW54 RNA polymerase subunit Rpb5, putative n=1 Tax=E...    60   6e-08
UniRef100_B0EA74 DNA-directed RNA polymerases I, II, and III sub...    60   6e-08
UniRef100_UPI0001B7AB22 UPI0001B7AB22 related cluster n=1 Tax=Ra...    60   1e-07
UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative n=1 Tax...    60   1e-07
UniRef100_A7APR4 RNA polymerase Rpb5, N-terminal domain containi...    59   1e-07
UniRef100_Q5KN51 DNA-directed RNA polymerases ii 24 kDa polypept...    59   1e-07
UniRef100_A8QAC6 Putative uncharacterized protein n=1 Tax=Malass...    59   1e-07
UniRef100_P20434 DNA-directed RNA polymerases I, II, and III sub...    59   1e-07
UniRef100_Q9P4B9 DNA-directed RNA polymerases I, II, and III sub...    59   1e-07
UniRef100_Q757H7 DNA-directed RNA polymerases I, II, and III sub...    59   1e-07
UniRef100_UPI00004E3EE0 RNA polymerase II core subunit n=1 Tax=D...    59   2e-07
UniRef100_Q4U8E3 DNA-directed RNA polymerase, subunit (RPB5 homo...    59   2e-07
UniRef100_C4YG42 DNA-directed RNA polymerases II 24 kDa polypept...    59   2e-07
UniRef100_B9W9S0 DNA-directed RNA polymerases I, II and III subu...    58   4e-07
UniRef100_B6JZQ6 DNA-directed RNA polymerase I n=1 Tax=Schizosac...    58   4e-07
UniRef100_Q09191 DNA-directed RNA polymerases I, II, and III sub...    58   4e-07
UniRef100_A3GI06 DNA-directed RNA polymerases II 24 kDa polypept...    57   5e-07
UniRef100_A9USL7 Predicted protein n=1 Tax=Monosiga brevicollis ...    57   6e-07
UniRef100_C5MBX4 DNA-directed RNA polymerases II 24 kDa polypept...    57   6e-07
UniRef100_Q6BIJ0 DNA-directed RNA polymerases I, II, and III sub...    56   1e-06
UniRef100_C5LN15 DNA-directed RNA polymerases II 24 kDa polypept...    54   4e-06
UniRef100_Q98RN7 RNA polymerase I, II and III 24.3 kDa subunit n...    54   5e-06
graphical overview:
alignment
UniRef100_O81098 UniRef100_O81098 UniRef100_B9N7D1 UniRef100_B9N7D1 UniRef100_A7PEL2 UniRef100_A7PEL2 UniRef100_C6SVA4 UniRef100_C6SVA4 UniRef100_C6SXZ4 UniRef100_C6SXZ4 UniRef100_B9RKM1 UniRef100_B9RKM1 UniRef100_B3TLL2 UniRef100_B3TLL2 UniRef100_A9RWG5 UniRef100_A9RWG5 UniRef100_A9RKG6 UniRef100_A9RKG6 UniRef100_B8LR68 UniRef100_B8LR68 UniRef100_A9NTD1 UniRef100_A9NTD1 UniRef100_B9ETS9 UniRef100_B9ETS9 UniRef100_Q5VQW7 UniRef100_Q5VQW7 UniRef100_B4FU06 UniRef100_B4FU06 UniRef100_Q7XUF8 UniRef100_Q7XUF8 UniRef100_B7EQI7 UniRef100_B7EQI7 UniRef100_A3AV22 UniRef100_A3AV22 UniRef100_B4FGM1 UniRef100_B4FGM1 UniRef100_C1MXV4 UniRef100_C1MXV4 UniRef100_UPI000194DF40 UniRef100_UPI000194DF40 UniRef100_B5FX59 UniRef100_B5FX59 UniRef100_Q6DEG5 UniRef100_Q6DEG5 UniRef100_C1C3Q7 UniRef100_C1C3Q7 UniRef100_Q4S3C9 UniRef100_Q4S3C9 UniRef100_C3KI95 UniRef100_C3KI95 UniRef100_C1BIS3 UniRef100_C1BIS3 UniRef100_Q28HF5 UniRef100_Q28HF5 UniRef100_A6N9W6 UniRef100_A6N9W6 UniRef100_A8J805 UniRef100_A8J805 UniRef100_UPI000186E78B UniRef100_UPI000186E78B UniRef100_UPI00005A3E0E UniRef100_UPI00005A3E0E UniRef100_UPI0000EB19D6 UniRef100_UPI0000EB19D6 UniRef100_UPI00005A3E0F UniRef100_UPI00005A3E0F UniRef100_Q8R0H0 UniRef100_Q8R0H0 UniRef100_Q5R587 UniRef100_Q5R587 UniRef100_Q80UW8 UniRef100_Q80UW8 UniRef100_P19388 UniRef100_P19388 UniRef100_UPI000051A7F2 UniRef100_UPI000051A7F2 UniRef100_UPI00003C0CAC UniRef100_UPI00003C0CAC UniRef100_C1BZT4 UniRef100_C1BZT4 UniRef100_UPI00015B5456 UniRef100_UPI00015B5456 UniRef100_B5X8S7 UniRef100_B5X8S7 UniRef100_UPI0000D9E960 UniRef100_UPI0000D9E960 UniRef100_B0X7A5 UniRef100_B0X7A5 UniRef100_B5XGU7 UniRef100_B5XGU7 UniRef100_B5X957 UniRef100_B5X957 UniRef100_C3ZQF0 UniRef100_C3ZQF0 UniRef100_B4MK71 UniRef100_B4MK71 UniRef100_B4KPZ3 UniRef100_B4KPZ3 UniRef100_B4J892 UniRef100_B4J892 UniRef100_Q7JZF5 UniRef100_Q7JZF5 UniRef100_B3MEP0 UniRef100_B3MEP0 UniRef100_UPI000180C3C9 UniRef100_UPI000180C3C9 UniRef100_B7T1F2 UniRef100_B7T1F2 UniRef100_A4RWP8 UniRef100_A4RWP8 UniRef100_B5DLL1 UniRef100_B5DLL1 UniRef100_UPI0000D56A05 UniRef100_UPI0000D56A05 UniRef100_UPI0000587A08 UniRef100_UPI0000587A08 UniRef100_Q01A87 UniRef100_Q01A87 UniRef100_C4WY48 UniRef100_C4WY48 UniRef100_UPI000056951D UniRef100_UPI000056951D UniRef100_Q2T9T3 UniRef100_Q2T9T3 UniRef100_B4GBQ3 UniRef100_B4GBQ3 UniRef100_B5E0K0 UniRef100_B5E0K0 UniRef100_C1EDR8 UniRef100_C1EDR8 UniRef100_Q9N5K2 UniRef100_Q9N5K2 UniRef100_Q5DDM1 UniRef100_Q5DDM1 UniRef100_UPI0000E24E5A UniRef100_UPI0000E24E5A UniRef100_C1C1G9 UniRef100_C1C1G9 UniRef100_C6K8L9 UniRef100_C6K8L9 UniRef100_A8XGH1 UniRef100_A8XGH1 UniRef100_B8C1Q1 UniRef100_B8C1Q1 UniRef100_C4PZ68 UniRef100_C4PZ68 UniRef100_C1BRK0 UniRef100_C1BRK0 UniRef100_B5DLP1 UniRef100_B5DLP1 UniRef100_B3S3Q9 UniRef100_B3S3Q9 UniRef100_B7FSY0 UniRef100_B7FSY0 UniRef100_C5KHW9 UniRef100_C5KHW9 UniRef100_C5KB88 UniRef100_C5KB88 UniRef100_A9SWJ6 UniRef100_A9SWJ6 UniRef100_A7RT72 UniRef100_A7RT72 UniRef100_Q54EH2 UniRef100_Q54EH2 UniRef100_Q9LUR5 UniRef100_Q9LUR5 UniRef100_Q9FJL8 UniRef100_Q9FJL8 UniRef100_B4GWF6 UniRef100_B4GWF6 UniRef100_B5LZ31 UniRef100_B5LZ31 UniRef100_A8NU15 UniRef100_A8NU15 UniRef100_Q8CI23 UniRef100_Q8CI23 UniRef100_B0D9Y7 UniRef100_B0D9Y7 UniRef100_B3L6X3 UniRef100_B3L6X3 UniRef100_B6KFE7 UniRef100_B6KFE7 UniRef100_A9UR01 UniRef100_A9UR01 UniRef100_C5DNB3 UniRef100_C5DNB3 UniRef100_A7TEH4 UniRef100_A7TEH4 UniRef100_A5K2Q3 UniRef100_A5K2Q3 UniRef100_Q4P7S7 UniRef100_Q4P7S7 UniRef100_C5DR69 UniRef100_C5DR69 UniRef100_Q6CJ62 UniRef100_Q6CJ62 UniRef100_Q4N141 UniRef100_Q4N141 UniRef100_Q6FQA6 UniRef100_Q6FQA6 UniRef100_Q4YN15 UniRef100_Q4YN15 UniRef100_C4LW54 UniRef100_C4LW54 UniRef100_B0EA74 UniRef100_B0EA74 UniRef100_UPI0001B7AB22 UniRef100_UPI0001B7AB22 UniRef100_Q8ID59 UniRef100_Q8ID59 UniRef100_A7APR4 UniRef100_A7APR4 UniRef100_Q5KN51 UniRef100_Q5KN51 UniRef100_A8QAC6 UniRef100_A8QAC6 UniRef100_P20434 UniRef100_P20434 UniRef100_Q9P4B9 UniRef100_Q9P4B9 UniRef100_Q757H7 UniRef100_Q757H7 UniRef100_UPI00004E3EE0 UniRef100_UPI00004E3EE0 UniRef100_Q4U8E3 UniRef100_Q4U8E3 UniRef100_C4YG42 UniRef100_C4YG42 UniRef100_B9W9S0 UniRef100_B9W9S0 UniRef100_B6JZQ6 UniRef100_B6JZQ6 UniRef100_Q09191 UniRef100_Q09191 UniRef100_A3GI06 UniRef100_A3GI06 UniRef100_A9USL7 UniRef100_A9USL7 UniRef100_C5MBX4 UniRef100_C5MBX4 UniRef100_Q6BIJ0 UniRef100_Q6BIJ0 UniRef100_C5LN15 UniRef100_C5LN15