ROUGE

Gene/Protein Characteristic Table for mKIAA4125

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AK220497
Description :	Cytoskeleton-like bicaudal D protein homolog 1.
Clone Name :	mfj35169 [Vector Info]
Source :	Mouse fetal brain

Features of the cloned DNA sequence	Description

Length: 4059 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Features of the protein sequence	Description

Coding region: 282..2891
Length: 870 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
CAQ51775	100.0	bicaudal D homo...	Mus musculus
CAQ51776	99.6	bicaudal D homo...	Mus musculus
Q8BR07	100.0	Protein bicauda...	Mus musculus
BAC38518	99.9	unnamed protein...	Mus musculus
BAC32557	99.8	unnamed protein...	Mus musculus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	ROUGE_ID
AK122348	7.6e-36	64.0	mKIAA0699

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method interpro_ID From To Entry Definition

ProfileScan NULL 60 287 PS50313 NULL

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 21 42 SIFIFIPICFSFSLLLCVYLRH

Search method	interpro_ID	From	To	Entry	Definition
ProfileScan	NULL	60	287	PS50313	NULL

Method	From	To	amino acid sequence
SOSUI	21	42	SIFIFIPICFSFSLLLCVYLRH

How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Gene/Protein Characteristic Table for mKIAA4125

Features of the cloned DNA sequence

Features of the protein sequence