ROUGE

Gene/Protein Characteristic Table for mKIAA1715

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AK173241
Description :	limb and neural patterns. lunapark.
Clone Name :	mph02652 [Vector Info]
Source :	Mouse embryonic tail

Features of the cloned DNA sequence	Description

Length: 3101 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 1699 bp

Genome contig ID gi66880554r_74118112
PolyA signal sequence
(ATTAAA,-20)
+----*----+----*----+----*----+----
ACGTGTCAATGATAGATTAAAGAAATGGAGAACTG
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAACTAGAATATAATCTTTTTATAAAAAGATGTGTTTATTTTTATTTTAT

Genomic structure deduced by Blast search against draft genome sequences
Comparison with the corresponding KIAA cDNA.

KIAA Alignment based on:

KIAA1715 DNA sequence, AA sequence, Physical map

KIAA	Alignment based on:
KIAA1715	DNA sequence, AA sequence, Physical map

Features of the protein sequence	Description

Coding region: 122..1402
Length: 426 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
Q7TQ95	7.1e-124	100.0	Protein lunapar...	Mus musculus
EDL79174	3.5e-117	94.6	limb and neural...	Rattus norvegicus
XP_001500067	5e-107	87.9	similar to Luna...	Equus caballus
XP_535972	6.2e-107	87.4	similar to Luna...	Canis lupus fam...
Q5R891	8.2e-103	84.2	Protein lunapark.	Pongo abelii

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method interpro_ID From To Entry Definition

ProfileScan IPR000694 179 246 PS50099 Proline-rich region

Search method	interpro_ID	From	To	Entry	Definition
ProfileScan	IPR000694	179	246	PS50099	Proline-rich region

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 43 65 WVGRLIIYSSILYLFTCLIVYLW

76 98 VMTLPFFAFPLIIWTLRTVLIFF

Method	From	To	amino acid sequence
SOSUI	43	65	WVGRLIIYSSILYLFTCLIVYLW
76	98	VMTLPFFAFPLIIWTLRTVLIFF

How to obtain mKIAA clone(s) How to obtain anti mKIAA antibodies Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	1699 bp
Genome contig ID	gi66880554r_74118112
PolyA signal sequence (ATTAAA,-20)	+--------+--------+----*----+---- ACGTGTCAATGATAGATTAAAGAAATGGAGAACTG
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AAACTAGAATATAATCTTTTTATAAAAAGATGTGTTTATTTTTATTTTAT

Gene/Protein Characteristic Table for mKIAA1715

Features of the cloned DNA sequence

Features of the protein sequence