# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph02652.fasta.nr -Q ../query/mKIAA1715.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1715, 426 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7909666 sequences Expectation_n fit: rho(ln(x))= 6.4859+/-0.000206; mu= 6.3788+/- 0.011 mean_var=141.6392+/-27.597, 0's: 25 Z-trim: 42 B-trim: 761 in 1/65 Lambda= 0.107766 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81886094|sp|Q7TQ95.1|LNP_MOUSE RecName: Full=Pr ( 425) 2819 449.5 7.1e-124 gi|149022280|gb|EDL79174.1| limb and neural patter ( 425) 2676 427.3 3.5e-117 gi|149730748|ref|XP_001500067.1| PREDICTED: simila ( 429) 2459 393.5 5e-107 gi|74004668|ref|XP_535972.2| PREDICTED: similar to ( 429) 2457 393.2 6.2e-107 gi|75041531|sp|Q5R891.1|LNP_PONAB RecName: Full=Pr ( 428) 2369 379.5 8.2e-103 gi|123233086|emb|CAM20517.1| limb and neural patte ( 376) 2328 373.1 6.2e-101 gi|109100230|ref|XP_001091675.1| PREDICTED: simila ( 620) 2330 373.6 7.1e-101 gi|16551959|dbj|BAB71207.1| unnamed protein produc ( 423) 2326 372.8 8.3e-101 gi|116487720|gb|AAI26101.1| Limb and neural patter ( 376) 2270 364.1 3.2e-98 gi|52545730|emb|CAH56306.1| hypothetical protein [ ( 398) 2216 355.7 1.1e-95 gi|114581926|ref|XP_515925.2| PREDICTED: hypotheti ( 402) 2064 332.1 1.5e-88 gi|148695213|gb|EDL27160.1| limb and neural patter ( 302) 2015 324.3 2.4e-86 gi|221044276|dbj|BAH13815.1| unnamed protein produ ( 359) 1939 312.6 9.6e-83 gi|219518888|gb|AAI43684.1| Unknown (protein for I ( 425) 1939 312.7 1.1e-82 gi|149022282|gb|EDL79176.1| limb and neural patter ( 302) 1878 303.0 6.1e-80 gi|123233088|emb|CAM20519.1| limb and neural patte ( 255) 1705 276.1 6.8e-72 gi|221043828|dbj|BAH13591.1| unnamed protein produ ( 279) 1648 267.2 3.4e-69 gi|220898220|gb|ACL81473.1| lnp [Latimeria menadoe ( 408) 1618 262.7 1.1e-67 gi|154183865|gb|ABS70802.1| lunapark b [Astatotila ( 419) 1505 245.2 2.2e-62 gi|114149972|sp|Q1KKR9.1|LNPB_FUGRU RecName: Full= ( 358) 1481 241.4 2.6e-61 gi|114149971|sp|Q6PFM4.2|LNPB_DANRE RecName: Full= ( 402) 1474 240.3 6e-61 gi|34785434|gb|AAH57494.1| Lnpb protein [Danio rer ( 422) 1474 240.4 6.2e-61 gi|154183859|gb|ABS70797.1| lunapark a [Astatotila ( 399) 1472 240.0 7.4e-61 gi|82188417|sp|Q7ZU80.1|LNPA_DANRE RecName: Full=P ( 393) 1457 237.7 3.7e-60 gi|37682155|gb|AAQ98004.1| Lunapark [Danio rerio] ( 393) 1452 236.9 6.4e-60 gi|189520125|ref|XP_001922707.1| PREDICTED: limb a ( 431) 1450 236.6 8.4e-60 gi|209149261|gb|ACI32976.1| lunapark-B [Salmo sala ( 400) 1441 235.2 2.1e-59 gi|219520043|gb|AAI43682.1| Unknown (protein for M ( 459) 1414 231.1 4.3e-58 gi|47218107|emb|CAG09979.1| unnamed protein produc ( 322) 1381 225.8 1.2e-56 gi|197632031|gb|ACH70739.1| limb and neural patter ( 411) 1377 225.3 2.1e-56 gi|114149967|sp|Q1KKT4.1|LNPA_FUGRU RecName: Full= ( 348) 1367 223.6 5.6e-56 gi|123233089|emb|CAM20520.1| limb and neural patte ( 196) 1289 211.3 1.7e-52 gi|149639701|ref|XP_001515087.1| PREDICTED: hypoth ( 443) 1234 203.1 1.1e-49 gi|210100062|gb|EEA48146.1| hypothetical protein B ( 319) 965 161.1 3.4e-37 gi|114149990|sp|Q28HF6.1|LNP_XENTR RecName: Full=P ( 423) 927 155.3 2.5e-35 gi|58476287|gb|AAH89636.1| MGC107809 protein [Xeno ( 423) 926 155.2 2.8e-35 gi|156538645|ref|XP_001607686.1| PREDICTED: simila ( 413) 816 138.1 3.8e-30 gi|157015088|gb|EAA12393.2| AGAP007983-PA [Anophel ( 341) 747 127.2 5.7e-27 gi|108880116|gb|EAT44341.1| conserved hypothetical ( 385) 735 125.4 2.3e-26 gi|167880459|gb|EDS43842.1| conserved hypothetical ( 354) 723 123.5 7.8e-26 gi|158702372|gb|ABW77558.1| lunapark [Salmo salar] ( 407) 710 121.6 3.5e-25 gi|74137979|dbj|BAE25399.1| unnamed protein produc ( 112) 699 119.3 4.6e-25 gi|223649178|gb|ACN11347.1| lunapark-A [Salmo sala ( 428) 700 120.0 1.1e-24 gi|197128719|gb|ACH45217.1| putative lunapark [Tae ( 125) 682 116.7 3.1e-24 gi|190620118|gb|EDV35642.1| GF12574 [Drosophila an ( 384) 656 113.2 1.1e-22 gi|193909913|gb|EDW08780.1| GI19374 [Drosophila mo ( 405) 635 109.9 1.1e-21 gi|193903859|gb|EDW02726.1| GH22144 [Drosophila gr ( 392) 621 107.7 5e-21 gi|194170797|gb|EDW85698.1| GK23211 [Drosophila wi ( 410) 607 105.6 2.3e-20 gi|194145721|gb|EDW62117.1| GJ19932 [Drosophila vi ( 414) 603 104.9 3.6e-20 gi|194124917|gb|EDW46960.1| GM20675 [Drosophila se ( 389) 600 104.4 4.7e-20 >>gi|81886094|sp|Q7TQ95.1|LNP_MOUSE RecName: Full=Protei (425 aa) initn: 2819 init1: 2819 opt: 2819 Z-score: 2380.3 bits: 449.5 E(): 7.1e-124 Smith-Waterman score: 2819; 100.000% identity (100.000% similar) in 425 aa overlap (2-426:1-425) 10 20 30 40 50 60 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 MGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 ARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 ARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 NPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDVLDNST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 NPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDVLDNST 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 EQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPNLEPSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 EQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPNLEPSE 360 370 380 390 400 410 mKIAA1 ESLVTK :::::: gi|818 ESLVTK 420 >>gi|149022280|gb|EDL79174.1| limb and neural patterns ( (425 aa) initn: 2676 init1: 2676 opt: 2676 Z-score: 2260.2 bits: 427.3 E(): 3.5e-117 Smith-Waterman score: 2676; 94.588% identity (97.412% similar) in 425 aa overlap (2-426:1-425) 10 20 30 40 50 60 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IVYLWYLPDEFIARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|149 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAATAKPGQEIRQRTAAQRNLSPA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPL ::.:.:::::: ::::::.::::::::::::::::::::::::::::::::::::::::: gi|149 PANSNQGPPPQVPVSPGPSKDASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 ARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ARPVLPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 NPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDVLDNST :::::::::::::::::::::::::::::::: ::::::: :.:: :::::::: ::::: gi|149 NPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPMLLESVPSPENQLTEDSLEEQDDLDNST 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 EQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPNLEPSE ::.::::::::::.::::.::::: ::::::::::::::::::::::.::: ::: :: gi|149 EQKDDKIPVTEQTNQVIEETSGPEGSEENQEETENEETSTNEAKSPVLRSDSVSNLELSE 360 370 380 390 400 410 mKIAA1 ESLVTK .:.::: gi|149 DSVVTK 420 >>gi|149730748|ref|XP_001500067.1| PREDICTED: similar to (429 aa) initn: 2356 init1: 1354 opt: 2459 Z-score: 2077.8 bits: 393.5 E(): 5e-107 Smith-Waterman score: 2459; 87.879% identity (93.240% similar) in 429 aa overlap (2-425:1-428) 10 20 30 40 50 60 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL :::::::::.:::::::::::::::::::::::::::::::::::::.::::::::::: gi|149 MGGLFSRWRTKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLILYSSILYLFTCL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI ::::::::::.::::.:::::::::::::..::::::::::::::::::::::::::::: gi|149 IVYLWYLPDELTARLAMTLPFFAFPLIIWSIRTVLIFFFSKRTERNNEALDDLKSQKKKI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::. gi|149 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTARPGQEIRQRTAAQRNLSPT 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPAL-----PRRLGSPATSVPGMGLHP ::::::::::: ::::: ::.:::::::::::.::: :::::::::::::::::: gi|149 PASSSQGPPPQVSVSPGPPKDTSAPGGPPERTVTPALSSNVLPRRLGSPATSVPGMGLHP 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 PGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCA 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 YCFFLNPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDV ::::::::::::::::::::::::::::::: ::.: :: :.:.:. :.::::::: gi|149 YCFFLNPARKTRPQAPRLPEFSFEKRQAVEGPSSVGHLPSGSVISSENQISEESLEEQDV 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 LDNSTEQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPN ::::::: :::: ::::.:: ::.:: ::: :.::::::: : ..:::: . ::::.:. gi|149 LDNSTEQTDDKISDTEQTNQVTEKASGTEEP-EKQEETENEGTLVKEAKSTIPRADSLPD 360 370 380 390 400 410 420 mKIAA1 LEPSEESLVTK : : ::::: gi|149 SELSGESLVTM 420 >>gi|74004668|ref|XP_535972.2| PREDICTED: similar to Lun (429 aa) initn: 2480 init1: 1368 opt: 2457 Z-score: 2076.1 bits: 393.2 E(): 6.2e-107 Smith-Waterman score: 2457; 87.383% identity (93.224% similar) in 428 aa overlap (2-424:1-427) 10 20 30 40 50 60 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL :::::::::.:::::::::::::::::::::::::::::::::::::.::::::::::: gi|740 MGGLFSRWRTKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLILYSSILYLFTCL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI :::::::::::::::.:::::::::::::..::::::::::::::::::::::::::::: gi|740 IVYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVLIFFFSKRTERNNEALDDLKSQKKKI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA :::::::::::::::::::::::::::::::::::::::::.::::::::::.::::::. gi|740 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTARPGQEIRQRTAVQRNLSPT 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPAL-----PRRLGSPATSVPGMGLHP ::::::::::: :::::: ::.:::::::::::.::: :::::::::::::::::: gi|740 PASSSQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRRLGSPATSVPGMGLHP 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 PGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 PGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCA 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 YCFFLNPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDV ::::::::::::::::::::::::::::::.::: :: :: :.:.:. :.:.::::: gi|740 YCFFLNPARKTRPQAPRLPEFSFEKRQAVESSSSLGPLPSGSVISSENQITEESVEEQDV 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 LDNSTEQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPN ::::::: ..:: ::::.: ::.:: ::: :.:: .:::.:: ::::: : ::: .:: gi|740 LDNSTEQTEEKISDTEQTNQGTEKVSGTEEPEEKQE-AENEDTSMNEAKSVVPRADPIPN 360 370 380 390 400 410 420 mKIAA1 LEPSEESLVTK : : :::. gi|740 PELSGESLMAM 420 >>gi|75041531|sp|Q5R891.1|LNP_PONAB RecName: Full=Protei (428 aa) initn: 2417 init1: 1303 opt: 2369 Z-score: 2002.2 bits: 379.5 E(): 8.2e-103 Smith-Waterman score: 2369; 84.186% identity (93.023% similar) in 430 aa overlap (2-426:1-428) 10 20 30 40 50 60 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL :::::::::.: :::::::.::::::::::::::::::::: :::::.:::.::::::: gi|750 MGGLFSRWRTKLSTVEVLESIDKEIQALEEFREKNQRLQKLRVGRLILYSSVLYLFTCL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI :::::::::::::::.:::::::::::::..:::.:::::::::::::::::::::.::: gi|750 IVYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA ::::::::::::::::::::::::::::: ::::::.::::.:::::::::::::::::. gi|750 LEEVMEKETYKTAKLILERFDPDSKKAKECEPPSAGGAVTARPGQEIRQRTAAQRNLSPT 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPAL-----PRRLGSPATSVPGMGLHP ::: .:::::: :::::: ::.:::::::::::.::: ::.::::::::::::::: gi|750 PASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHP 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 PGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 PGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCA 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 YCFFLNPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDV :::::::::::::::::::::::::::.::::::.:: :: :...:. :.::: ::: gi|750 YCFFLNPARKTRPQAPRLPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLE-QDV 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 LDNSTEQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPN :::.::: :::::.::::.:::::.: ::: :.:: :::::.:. :..: : :::.:. gi|750 LDNNTEQTDDKIPATEQTNQVIEKASDSEEPEEKQE-TENEEASVIETNSTVPGADSIPD 360 370 380 390 400 410 420 mKIAA1 LEPSEESLVTK : . :::... gi|750 PELNGESLTAE 420 >>gi|123233086|emb|CAM20517.1| limb and neural patterns (376 aa) initn: 2328 init1: 2328 opt: 2328 Z-score: 1968.4 bits: 373.1 E(): 6.2e-101 Smith-Waterman score: 2328; 100.000% identity (100.000% similar) in 346 aa overlap (2-347:1-346) 10 20 30 40 50 60 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 MGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 ARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 ARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 NPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDVLDNST ::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEGGTIPQMSHFLSE 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 EQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPNLEPSE gi|123 ISGVKSNWLKVNPSKTL 360 370 >>gi|109100230|ref|XP_001091675.1| PREDICTED: similar to (620 aa) initn: 2388 init1: 1287 opt: 2330 Z-score: 1967.4 bits: 373.6 E(): 7.1e-101 Smith-Waterman score: 2330; 84.360% identity (92.417% similar) in 422 aa overlap (10-426:201-620) 10 20 30 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRL ..:::::::::.:::::::::::::::::: gi|109 CEFLWTIDDIYHCAQFLQIKDGWIIFSMEGKTKPSTVEVLESIDKEIQALEEFREKNQRL 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA1 QKLWVGRLIIYSSILYLFTCLIVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFF :::::::::.:::.::::::::::::::::::::::.:::::::::::::..:::::::: gi|109 QKLWVGRLILYSSVLYLFTCLIVYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVLIFFF 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA1 SKRTERNNEALDDLKSQKKKILEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAV :::::::::::::::::.:::::::::::::::::::::::::::::::: ::::::::: gi|109 SKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKLILERFDPDSKKAKECEPPSAGAAV 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA1 TAKPGQEIRQRTAAQRNLSPAPASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPALP- ::.:::::::::::::::::.::: .:::::: :::::: ::.:::::::::::.:::: gi|109 TARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALPS 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA1 ----RRLGSPATSVPGMGLHPPGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQ :.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NVLPRHLGSPATSVPGMGLHPPGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQ 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA1 CFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTL :::::::::::::::::::::::::::::::::::::::::::::::: ::::::.:: gi|109 CFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQAPRLPEFSFEKRQMVEGSSSVGPLP 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA1 LESVPSAESQLIEDSLEEQDVLDNSTEQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETE :: :...:. :.::: :::::::::: :::.:.:::: . :::.: ::: :.:: :: gi|109 SGSVLSSDNQFTEESLE-QDVLDNSTEQTDDKMPATEQTHEGIEKASDSEEPEEKQE-TE 540 550 560 570 580 400 410 420 mKIAA1 NEETSTNEAKSPVLRADSVPNLEPSEESLVTK :::.:. ::.: : :::.:. : : : :... gi|109 NEEASVIEANSTVPGADSIPDPELSGEYLTAE 590 600 610 620 >>gi|16551959|dbj|BAB71207.1| unnamed protein product [H (423 aa) initn: 2381 init1: 1273 opt: 2326 Z-score: 1966.1 bits: 372.8 E(): 8.3e-101 Smith-Waterman score: 2326; 83.886% identity (93.365% similar) in 422 aa overlap (10-426:4-423) 10 20 30 40 50 60 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL ..:::::::::.:::::::::::::::::::::::::::.:::.::::::: gi|165 MEGKTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI :::::::::::::::.:::::::::::::..:::.:::::::::::::::::::::.::: gi|165 IVYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA ::::::::::::::::::::::::::::: :::::::::::.:::::::::::::::::. gi|165 LEEVMEKETYKTAKLILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPT 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPAL-----PRRLGSPATSVPGMGLHP ::: .:::::: :::::: ::.:::::::::::.::: ::.::::::::::::::: gi|165 PASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHP 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 PGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCA ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|165 PGPPLARPILPRERGALDRIVEHLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCA 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 YCFFLNPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDV :::::::::::::::::::::::::::.::::::.:: :: :...:. :.::: .:: gi|165 YCFFLNPARKTRPQAPRLPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLE-HDV 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 LDNSTEQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPN ::..::: :::::.::::.:::::.: ::: :.:: :::::.:. :..: : :::.:. gi|165 LDDNTEQTDDKIPATEQTNQVIEKASDSEEPEEKQE-TENEEASVIETNSTVPGADSIPD 360 370 380 390 400 410 420 mKIAA1 LEPSEESLVTK : : :::... gi|165 PELSGESLTAE 420 >>gi|116487720|gb|AAI26101.1| Limb and neural patterns [ (376 aa) initn: 2317 init1: 2270 opt: 2270 Z-score: 1919.7 bits: 364.1 E(): 3.2e-98 Smith-Waterman score: 2270; 96.821% identity (98.555% similar) in 346 aa overlap (2-347:1-346) 10 20 30 40 50 60 mKIAA1 KMGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 MGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCL 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IVYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|116 IVYLWYLPDEFIARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKI 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPA ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|116 LEEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAATAKPGQEIRQRTAAQRNLSPA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 PASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPL ::.:.:::::: ::::::.::::::::::::::::::::::::::::::::::::::::: gi|116 PANSNQGPPPQVPVSPGPSKDASAPGGPPERTVAPALPRRLGSPATSVPGMGLHPPGPPL 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 ARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ARPVLPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 NPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDVLDNST :::::::::::::::::::::::::::::::: ::::::: :.:: : gi|116 NPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPMLLESVPSPENQLTEGGTIPQMSHFLSE 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 EQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPNLEPSE gi|116 ISGMKSNWLKVNPSKTL 360 370 >>gi|52545730|emb|CAH56306.1| hypothetical protein [Homo (398 aa) initn: 2271 init1: 1157 opt: 2216 Z-score: 1874.0 bits: 355.7 E(): 1.1e-95 Smith-Waterman score: 2216; 84.000% identity (93.000% similar) in 400 aa overlap (32-426:1-398) 10 20 30 40 50 60 mKIAA1 MGGLFSRWRAKPSTVEVLENIDKEIQALEEFREKNQRLQKLWVGRLIIYSSILYLFTCLI :::::::::::::::::.:::.:::::::: gi|525 FREKNQRLQKLWVGRLILYSSVLYLFTCLI 10 20 30 70 80 90 100 110 120 mKIAA1 VYLWYLPDEFTARLVMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKIL ::::::::::::::.:::::::::::::..:::.:::::::::::::::::::::.:::: gi|525 VYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKIL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 EEVMEKETYKTAKLILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPAP :::::::::::::::::::::::::::: :::::::::::.:::::::::::::::::.: gi|525 EEVMEKETYKTAKLILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTP 100 110 120 130 140 150 190 200 210 220 230 mKIAA1 ASSSQGPPPQGPVSPGPAKDASAPGGPPERTVAPAL-----PRRLGSPATSVPGMGLHPP :: .:::::: :::::: ::.:::::::::::.::: ::.:::::::::::::::: gi|525 ASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPP 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA1 GPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 GPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAY 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA1 CFFLNPARKTRPQAPRLPEFSFEKRQAVEGSSSTGPTLLESVPSAESQLIEDSLEEQDVL ::::::::::::::::::::::::::.::::::.:: :: :...:. :.::: .::: gi|525 CFFLNPARKTRPQAPRLPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLE-HDVL 280 290 300 310 320 360 370 380 390 400 410 mKIAA1 DNSTEQRDDKIPVTEQTSQVIEKTSGPEEPAENQEETENEETSTNEAKSPVLRADSVPNL :..::: :::::.::::.:::::.: ::: :.:: :::::.:. :..: : :::.:. gi|525 DDNTEQTDDKIPATEQTNQVIEKASDSEEPEEKQE-TENEEASVIETNSTVPGADSIPDP 330 340 350 360 370 380 420 mKIAA1 EPSEESLVTK : : :::... gi|525 ELSGESLTAE 390 426 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 13:04:52 2009 done: Sun Mar 15 13:11:39 2009 Total Scan time: 916.250 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]