ROUGE

Gene/Protein Characteristic Table for mKIAA1150

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AK173113
Description :	transcription repressor p66 component of the MeCP1 complex. transcription repressor p66.
Clone Name :	mic27021 [Vector Info]
Source :	Mouse adult pancreatic islet

Features of the cloned DNA sequence	Description

Length: 4681 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 3569 bp

Genome contig ID gi65492966f_90060879
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
GGAATTGTACATTGTGTAGAAAAAAAAAAAACATG
Flanking genome sequence
(111111 - 111160)
----+----*----+----*----+----*----+----*----+----*
AAAAAGAGAAAAAAAAAAAAAGCCCTAGCCATGGATATTGTGAAACTGTG

Genomic structure deduced by Blast search against draft genome sequences
Comparison with the corresponding KIAA cDNA.

KIAA Alignment based on:

KIAA1150 DNA sequence, AA sequence, Physical map

KIAA	Alignment based on:
KIAA1150	DNA sequence, AA sequence, Physical map

Features of the protein sequence	Description

Coding region: 3..1112
Length: 369 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
Q8VHR5	3.6e-127	100.0	Transcriptional...	Mus musculus
AAH97428	1.1e-126	99.5	GATA zinc finge...	Rattus norvegicus
XP_001929553	5.3e-126	98.4	GATA zinc finge...	Sus scrofa
XP_001495380	5.3e-126	98.4	GATA zinc finge...	Equus caballus
Q8WXI9	1e-125	98.1	Transcriptional...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR000679 196 230 PF00320 Zinc finger

ProfileScan IPR000679 190 220 PS50114 Zinc finger

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

- - - -

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000679	196	230	PF00320	Zinc finger
ProfileScan	IPR000679	190	220	PS50114	Zinc finger

Method	From	To	amino acid sequence
-	-	-	-

How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	3569 bp
Genome contig ID	gi65492966f_90060879
PolyA signal sequence (None)	+--------+--------+----*----+---- GGAATTGTACATTGTGTAGAAAAAAAAAAAACATG
Flanking genome sequence (111111 - 111160)	----+--------+--------+--------+--------+----* AAAAAGAGAAAAAAAAAAAAAGCCCTAGCCATGGATATTGTGAAACTGTG

Gene/Protein Characteristic Table for mKIAA1150

Features of the cloned DNA sequence

Features of the protein sequence