ROUGE

Gene/Protein Characteristic Table for mKIAA1094

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	BC019543
Description :
Clone Name :	mbk01062 [Vector Info]
Source :	Mouse brain

Features of the cloned DNA sequence	Description

Length: 622 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 167 bp

Genome contig ID gi66880554r_30116423
PolyA signal sequence
(AATAAA,-20)
+----*----+----*----+----*----+----
TTGTTTCAGACTTAAAATAAAGAAGCAAAGCTCTC
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
CTGGTTTTATTTTTGCTGATATTTAAAATACAAAAAAAAAAAAAAAAAAA

Genomic structure deduced by Blast search against draft genome sequences
Comparison with the corresponding KIAA cDNA.

KIAA Alignment based on:

KIAA1094 DNA sequence, AA sequence, Physical map

KIAA	Alignment based on:
KIAA1094	DNA sequence, AA sequence, Physical map

Features of the protein sequence	Description

Coding region: 3..455
Length: 150 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
ABQ22586	2.4e-56	98.7	transmembrane p...	Callithrix jacchus
ABQ22725	4.6e-56	98.0	transmembrane p...	Callithrix jacchus
ABY84169	5.4e-56	98.7	transmembrane p...	Callithrix jacchus
ABY56110	5.4e-56	98.7	dolichol kinase...	Papio anubis
ACA57898	5.4e-56	98.7	transmembrane p...	Callicebus moloch

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method interpro_ID From To Entry Definition

None - - - - -

Search method	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 14 36 GPLILTHIYLLLGMSLPIWLIPR

52 74 PYAGVLAVGVGDTVASIFGSTMG

87 109 GTMTSIFAQIISVALILIFDSGV

122 144 ISTVSLLEAYTTQIDNLLLPLYL

Method	From	To	amino acid sequence
SOSUI	14	36	GPLILTHIYLLLGMSLPIWLIPR
52	74	PYAGVLAVGVGDTVASIFGSTMG
87	109	GTMTSIFAQIISVALILIFDSGV
122	144	ISTVSLLEAYTTQIDNLLLPLYL

How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	167 bp
Genome contig ID	gi66880554r_30116423
PolyA signal sequence (AATAAA,-20)	+--------+--------+----*----+---- TTGTTTCAGACTTAAAATAAAGAAGCAAAGCTCTC
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* CTGGTTTTATTTTTGCTGATATTTAAAATACAAAAAAAAAAAAAAAAAAA

Gene/Protein Characteristic Table for mKIAA1094

Features of the cloned DNA sequence

Features of the protein sequence