# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbk01062.fasta.nr -Q ../query/mKIAA1094.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1094, 150 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921088 sequences Expectation_n fit: rho(ln(x))= 4.7024+/-0.000179; mu= 8.3689+/- 0.010 mean_var=65.2709+/-13.051, 0's: 37 Z-trim: 42 B-trim: 0 in 0/66 Lambda= 0.158750 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|146332161|gb|ABQ22586.1| transmembrane protein ( 185) 936 222.4 2.4e-56 gi|146332439|gb|ABQ22725.1| transmembrane protein ( 185) 932 221.5 4.6e-56 gi|166183808|gb|ABY84169.1| transmembrane protein ( 538) 936 222.8 5.4e-56 gi|164449283|gb|ABY56110.1| dolichol kinase (predi ( 538) 936 222.8 5.4e-56 gi|169409553|gb|ACA57898.1| transmembrane protein ( 538) 936 222.8 5.4e-56 gi|90085148|dbj|BAE91315.1| unnamed protein produc ( 538) 936 222.8 5.4e-56 gi|194033676|ref|XP_001928954.1| PREDICTED: simila ( 538) 935 222.6 6.3e-56 gi|75057539|sp|Q58CR4.1|DOLK_BOVIN RecName: Full=D ( 538) 935 222.6 6.3e-56 gi|20140913|sp|Q9UPQ8.1|DOLK_HUMAN RecName: Full=D ( 538) 932 221.9 1e-55 gi|183636979|gb|ACC64536.1| transmembrane protein ( 538) 932 221.9 1e-55 gi|149039108|gb|EDL93328.1| transmembrane protein ( 536) 931 221.7 1.2e-55 gi|149738248|ref|XP_001500302.1| PREDICTED: simila ( 538) 918 218.7 9.4e-55 gi|57092051|ref|XP_537820.1| PREDICTED: similar to ( 536) 909 216.6 3.9e-54 gi|190344049|gb|ACE75825.1| transmembrane protein ( 537) 905 215.7 7.4e-54 gi|224073470|ref|XP_002194897.1| PREDICTED: dolich ( 523) 823 196.9 3.3e-48 gi|126297793|ref|XP_001368167.1| PREDICTED: simila ( 524) 823 196.9 3.3e-48 gi|50757350|ref|XP_415482.1| PREDICTED: similar to ( 523) 809 193.7 3e-47 gi|149573906|ref|XP_001517971.1| PREDICTED: simila ( 485) 805 192.8 5.4e-47 gi|47215146|emb|CAG12437.1| unnamed protein produc ( 518) 782 187.5 2.2e-45 gi|49116007|gb|AAH73693.1| MGC83595 protein [Xenop ( 521) 759 182.3 8.4e-44 gi|134024872|gb|AAI34947.1| Zgc:162284 protein [Da ( 524) 746 179.3 6.6e-43 gi|108876937|gb|EAT41162.1| conserved hypothetical ( 257) 399 99.6 3.3e-19 gi|167873539|gb|EDS36922.1| transmembrane protein ( 472) 383 96.1 6.5e-18 gi|190586872|gb|EDV26925.1| hypothetical protein T ( 493) 367 92.5 8.6e-17 gi|189234480|ref|XP_969890.2| PREDICTED: similar t ( 236) 355 89.4 3.3e-16 gi|194109538|gb|EDW31581.1| GL11205 [Drosophila pe ( 506) 355 89.7 5.9e-16 gi|54635449|gb|EAL24852.1| GA20976 [Drosophila pse ( 506) 355 89.7 5.9e-16 gi|157018002|gb|EAA07721.4| AGAP002683-PA [Anophel ( 470) 354 89.5 6.5e-16 gi|193902122|gb|EDW00989.1| GH20708 [Drosophila gr ( 465) 351 88.8 1e-15 gi|198421004|ref|XP_002126497.1| PREDICTED: simila ( 484) 348 88.1 1.7e-15 gi|193910511|gb|EDW09378.1| GI19069 [Drosophila mo ( 455) 347 87.9 1.9e-15 gi|60466630|gb|EAL64682.1| hypothetical protein DD ( 635) 345 87.5 3.4e-15 gi|194126122|gb|EDW48165.1| GM20049 [Drosophila se ( 503) 343 87.0 3.9e-15 gi|190621946|gb|EDV37470.1| GF13462 [Drosophila an ( 501) 342 86.7 4.6e-15 gi|7302906|gb|AAF57978.1| CG8311 [Drosophila melan ( 503) 342 86.7 4.6e-15 gi|201065507|gb|ACH92163.1| FI02089p [Drosophila m ( 542) 342 86.8 4.9e-15 gi|190658521|gb|EDV55734.1| GG22259 [Drosophila er ( 502) 340 86.3 6.3e-15 gi|215493286|gb|EEC02927.1| transmembrane protein, ( 507) 340 86.3 6.4e-15 gi|194145537|gb|EDW61933.1| GJ20042 [Drosophila vi ( 465) 339 86.0 7e-15 gi|194178288|gb|EDW91899.1| GE14052 [Drosophila ya ( 504) 339 86.1 7.4e-15 gi|157346712|emb|CAO16781.1| unnamed protein produ ( 564) 339 86.1 8.1e-15 gi|194193806|gb|EDX07382.1| GD25530 [Drosophila si ( 503) 337 85.6 1e-14 gi|194158888|gb|EDW73789.1| GK19504 [Drosophila wi ( 500) 336 85.4 1.2e-14 gi|215695461|dbj|BAG90656.1| unnamed protein produ ( 350) 334 84.8 1.2e-14 gi|113535408|dbj|BAF07791.1| Os02g0146500 [Oryza s ( 375) 334 84.8 1.3e-14 gi|222622163|gb|EEE56295.1| hypothetical protein O ( 509) 334 84.9 1.7e-14 gi|218190050|gb|EEC72477.1| hypothetical protein O ( 568) 334 85.0 1.8e-14 gi|218190054|gb|EEC72481.1| hypothetical protein O ( 588) 334 85.0 1.8e-14 gi|147861387|emb|CAN81885.1| hypothetical protein ( 343) 331 84.1 2e-14 gi|22331608|ref|NP_190090.2| phosphatidate cytidyl ( 569) 330 84.0 3.4e-14 >>gi|146332161|gb|ABQ22586.1| transmembrane protein 15-l (185 aa) initn: 936 init1: 936 opt: 936 Z-score: 1167.8 bits: 222.4 E(): 2.4e-56 Smith-Waterman score: 936; 98.667% identity (98.667% similar) in 150 aa overlap (1-150:36-185) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::::::::::::::::::::::::::::: gi|146 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLSLFLDERDSGPLILTHIYLLLGMSLP 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT ::::::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|146 IWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 130 140 150 160 170 180 >>gi|146332439|gb|ABQ22725.1| transmembrane protein 15-l (185 aa) initn: 932 init1: 932 opt: 932 Z-score: 1162.9 bits: 221.5 E(): 4.6e-56 Smith-Waterman score: 932; 98.000% identity (98.667% similar) in 150 aa overlap (1-150:36-185) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::::::::::::::::::::::::::::: gi|146 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLSLFLDERDSGPLILTHIYLLLGMSLP 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT ::.:::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|146 IWVIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 130 140 150 160 170 180 >>gi|166183808|gb|ABY84169.1| transmembrane protein 15 ( (538 aa) initn: 936 init1: 936 opt: 936 Z-score: 1161.6 bits: 222.8 E(): 5.4e-56 Smith-Waterman score: 936; 98.667% identity (98.667% similar) in 150 aa overlap (1-150:389-538) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::::::::::::::::::::::::::::: gi|166 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLSLFLDERDSGPLILTHIYLLLGMSLP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT ::::::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|166 IWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 480 490 500 510 520 530 >>gi|164449283|gb|ABY56110.1| dolichol kinase (predicted (538 aa) initn: 936 init1: 936 opt: 936 Z-score: 1161.6 bits: 222.8 E(): 5.4e-56 Smith-Waterman score: 936; 98.667% identity (98.667% similar) in 150 aa overlap (1-150:389-538) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::::::::::::::::::::::::::::: gi|164 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLSLFLDERDSGPLILTHIYLLLGMSLP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT ::::::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|164 IWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 480 490 500 510 520 530 >>gi|169409553|gb|ACA57898.1| transmembrane protein 15 ( (538 aa) initn: 936 init1: 936 opt: 936 Z-score: 1161.6 bits: 222.8 E(): 5.4e-56 Smith-Waterman score: 936; 98.667% identity (98.667% similar) in 150 aa overlap (1-150:389-538) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::::::::::::::::::::::::::::: gi|169 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLSLFLDERDSGPLILTHIYLLLGMSLP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT ::::::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|169 IWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 480 490 500 510 520 530 >>gi|90085148|dbj|BAE91315.1| unnamed protein product [M (538 aa) initn: 936 init1: 936 opt: 936 Z-score: 1161.6 bits: 222.8 E(): 5.4e-56 Smith-Waterman score: 936; 98.667% identity (98.667% similar) in 150 aa overlap (1-150:389-538) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::::::::::::::::::::::::::::: gi|900 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLSLFLDERDSGPLILTHIYLLLGMSLP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT ::::::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|900 IWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 480 490 500 510 520 530 >>gi|194033676|ref|XP_001928954.1| PREDICTED: similar to (538 aa) initn: 935 init1: 935 opt: 935 Z-score: 1160.4 bits: 222.6 E(): 6.3e-56 Smith-Waterman score: 935; 98.000% identity (98.667% similar) in 150 aa overlap (1-150:389-538) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::::::::::::::::::::::::::::: gi|194 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLSLFLDERDSGPLILTHIYLLLGMSLP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT :::.::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|194 IWLVPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 480 490 500 510 520 530 >>gi|75057539|sp|Q58CR4.1|DOLK_BOVIN RecName: Full=Dolic (538 aa) initn: 935 init1: 935 opt: 935 Z-score: 1160.4 bits: 222.6 E(): 6.3e-56 Smith-Waterman score: 935; 98.000% identity (98.667% similar) in 150 aa overlap (1-150:389-538) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::::::::::::::::::::::::::::: gi|750 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLSLFLDERDSGPLILTHIYLLLGMSLP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT :::.::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|750 IWLVPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 480 490 500 510 520 530 >>gi|20140913|sp|Q9UPQ8.1|DOLK_HUMAN RecName: Full=Dolic (538 aa) initn: 932 init1: 932 opt: 932 Z-score: 1156.6 bits: 221.9 E(): 1e-55 Smith-Waterman score: 932; 98.000% identity (98.667% similar) in 150 aa overlap (1-150:389-538) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP ::.::::::::::::::::::::::::::: gi|201 LYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSFLSLFLDERDSGPLILTHIYLLLGMSLP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT ::::::::::: :: ::::::::::::::::::::::::::::::::::::::::::::: gi|201 IWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|201 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 480 490 500 510 520 530 >>gi|183636979|gb|ACC64536.1| transmembrane protein 15 ( (538 aa) initn: 932 init1: 932 opt: 932 Z-score: 1156.6 bits: 221.9 E(): 1e-55 Smith-Waterman score: 932; 97.333% identity (98.667% similar) in 150 aa overlap (1-150:389-538) 10 20 30 mKIAA1 RSLLSLFLDERDSGPLILTHIYLLLGMSLP :::: ::::::::::::::::::::::::: gi|183 LYVAATVCLAVFVFLEYVRYFRIKPLGHTLRSLLCLFLDERDSGPLILTHIYLLLGMSLP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 IWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT :::.:::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|183 IWLVPRPCTQKDSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPGTKKTFEGTMT 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA1 SIFAQIISVALILIFDSGVDLNYSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|183 SIFAQIISVALILIFDSGVDLNHSYAWILGSISTVSLLEAYTTQIDNLLLPLYLLILLMA 480 490 500 510 520 530 150 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 16:06:10 2009 done: Thu Mar 12 16:10:19 2009 Total Scan time: 599.900 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]