ROUGE

Gene/Protein Characteristic Table for mKIAA0091

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AK122202
Description :	Membrane-bound transcription factor site-1 protease precursor.
Clone Name :	mbh04269 [Vector Info]
Source :	Mouse brain

Features of the cloned DNA sequence	Description

Length: 4186 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
YES

Integrity of 3' end

Length of 3'UTR 1159 bp

Genome contig ID gi65515060r_118750262
PolyA signal sequence
(AATAAA,-19)
+----*----+----*----+----*----+----
GGTGAAGGAAATTTTCAATAAATATGCATAACCTT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
ACAAAGCTGGCATGTGTCGTGCCCCAGCCCCCTGCACCTTCCCATTCTCT

Genomic structure deduced by Blast search against draft genome sequences
Comparison with the corresponding KIAA cDNA.

KIAA Alignment based on:

KIAA0091 DNA sequence, AA sequence, Physical map

KIAA	Alignment based on:
KIAA0091	DNA sequence, AA sequence, Physical map

Features of the protein sequence	Description

Coding region: 388..3021, 3027..3563
Length: 1056 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
EDL11601	99.8	membrane-bound ...	Mus musculus
Q9WTZ2	99.8	Membrane-bound ...	Mus musculus
AAH57198	99.7	Membrane-bound ...	Mus musculus
ABK51402	99.7	membrane-bound ...	Mus musculus
Q9WTZ3	98.1	Membrane-bound ...	Rattus norvegicus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

FPrintScan IPR000209 215 234 PR00723 Peptidase S8 and S53

IPR000209 251 264 PR00723 Peptidase S8 and S53

IPR000209 417 433 PR00723 Peptidase S8 and S53

HMMPfam IPR000209 198 470 PF00082 Peptidase S8 and S53

ScanRegExp IPR000209 255 265 PS00137 Peptidase S8 and S53

IPR000209 418 428 PS00138 Peptidase S8 and S53

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR000209	215	234	PR00723	Peptidase S8 and S53
IPR000209	251	264	PR00723	Peptidase S8 and S53
IPR000209	417	433	PR00723	Peptidase S8 and S53
HMMPfam	IPR000209	198	470	PF00082	Peptidase S8 and S53
ScanRegExp	IPR000209	255	265	PS00137	Peptidase S8 and S53
IPR000209	418	428	PS00138	Peptidase S8 and S53

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 2 23 YSLRTMKLVSTWLLVLVVLLCG

52 73 EFSSTVVEYEYIVAFNGYFTAK

1005 1027 TIPVFAFLGAMVALAFFVVQISK

Method	From	To	amino acid sequence
SOSUI	2	23	YSLRTMKLVSTWLLVLVVLLCG
52	73	EFSSTVVEYEYIVAFNGYFTAK
1005	1027	TIPVFAFLGAMVALAFFVVQISK

How to obtain mKIAA clone(s) How to obtain anti mKIAA antibodies Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	YES

Length of 3'UTR	1159 bp
Genome contig ID	gi65515060r_118750262
PolyA signal sequence (AATAAA,-19)	+--------+--------+----*----+---- GGTGAAGGAAATTTTCAATAAATATGCATAACCTT
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* ACAAAGCTGGCATGTGTCGTGCCCCAGCCCCCTGCACCTTCCCATTCTCT

Gene/Protein Characteristic Table for mKIAA0091

Features of the cloned DNA sequence

Features of the protein sequence