ROUGE

Gene/Protein Characteristic Table for mFLJ00171

Link to : NEDO \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AK220151
Description :	solute carrier family 37 (glycerol-3-phosphate transporter), member 2. cAMP inducible 2 protein. cAMP inducible gene 2. solute carrier family 37 (glycerol-3-phosphate transporter), member 1.
Clone Name :	mej02159 [Vector Info]
Source :	Mouse embryonic intestinal tract

Features of the cloned DNA sequence	Description

Length: 2439 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 1095 bp

Genome contig ID gi65519420r_37072128
PolyA signal sequence
(AATACA,-24)
+----*----+----*----+----*----+----
CCATCAGCACCAATACAGATTTCCTTTGCCAACTG
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
TGCCACTGCTTATCCTTGGTAGGGCCTGGCATAGCAGCAGCCATGGGGCT

Genomic structure deduced by Blast search against draft genome sequences
Comparison with the corresponding KIAA cDNA.

KIAA Alignment based on:

FLJ00171 DNA sequence, AA sequence, Physical map

KIAA	Alignment based on:
FLJ00171	DNA sequence, AA sequence, Physical map

Features of the protein sequence	Description

Coding region: 139..1344
Length: 401 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAD90337	4.5e-161	100.0	mFLJ00171 prote...	Mus musculus
BAC26224	2.3e-158	100.0	unnamed protein...	Mus musculus
Q9WU81	8.3e-155	100.0	Sugar phosphate...	Mus musculus
EDL25419	8.6e-155	100.0	solute carrier ...	Mus musculus
BAC37639	1.5e-154	99.7	unnamed protein...	Mus musculus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR011701 13 351 PF07690 Major facilitator superfamily MFS_1

ProfileScan IPR007114 1 380 PS50850 Major facilitator superfamily

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR011701	13	351	PF07690	Major facilitator superfamily MFS_1
ProfileScan	IPR007114	1	380	PS50850	Major facilitator superfamily

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 19 41 LSGLFTSLFGLGYFWNIHMLWYF

75 97 IMGIWNSHTSVGNILGSLIAGVW

105 127 SFIVPGIITAIMGVITFLFLIEY

180 202 AISFLGALRIPGVIEFSLCLLFA

204 226 LVSYTFLYWLPLYIFNVAHFSAK

230 252 DLSTLFDVGGIIGGIMAGLISDY

259 281 TCCIMLILAAPMMFLYNYIGQNG

286 308 IVMLIICGVLVNGPYALITTAVS

326 348 TVTAIIDGTGSIGAALGPLLAGL

360 382 MLISADVLACLLLCRLVYKEILA

Method	From	To	amino acid sequence
SOSUI	19	41	LSGLFTSLFGLGYFWNIHMLWYF
75	97	IMGIWNSHTSVGNILGSLIAGVW
105	127	SFIVPGIITAIMGVITFLFLIEY
180	202	AISFLGALRIPGVIEFSLCLLFA
204	226	LVSYTFLYWLPLYIFNVAHFSAK
230	252	DLSTLFDVGGIIGGIMAGLISDY
259	281	TCCIMLILAAPMMFLYNYIGQNG
286	308	IVMLIICGVLVNGPYALITTAVS
326	348	TVTAIIDGTGSIGAALGPLLAGL
360	382	MLISADVLACLLLCRLVYKEILA

How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	1095 bp
Genome contig ID	gi65519420r_37072128
PolyA signal sequence (AATACA,-24)	+--------+--------+----*----+---- CCATCAGCACCAATACAGATTTCCTTTGCCAACTG
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* TGCCACTGCTTATCCTTGGTAGGGCCTGGCATAGCAGCAGCCATGGGGCT

Gene/Protein Characteristic Table for mFLJ00171

Features of the cloned DNA sequence

Features of the protein sequence