Miyakogusa Predicted Gene

chr1.CM0064.590.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0064
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7PLS8_VITVI 631 72.2 83.0 (tr|A7PLS8) Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020552001 PE=4 SV=1
TAIR_pep AT5G14250.1 521 61.4 73.6 | Symbols: CSN3, FUS11, COP13 | COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13) | chr5:4597973-4600564 FORWARD
Medicago IMGA|AC138464_33.5 670 74.8 86.1 Proteasome component region PCI chr06_pseudomolecule_IMGAG_V2 3823304-3814482 E EGN_Mt071002 20080227
Soybean Glyma05g15210.1 717 79.4 88.7  
3' Unigene AV774876 599 96.2 96.2 MPD074g05_f
5' Unigene AV414895 50.1 88.9 88.9 MWM250e08_r
A list of protein families, domains and functional sites (searches in InterPro)
chr1.CM0064.590.nc length: 423 aa.
IPR000717 Proteasome component region PCI
method AccNumber shortName E-value location
HMMPfam PF01399 PCI 1.2e-22 254-358
HMMSmart SM00088 no description 1e-22 289-379
no_ID  
Gene3D 1.10.10.10 no description 5e-05 291-367
HMMPanther PTHR10758 26S 4e-88 91-421
ProfileScan PS50250 PCI_DOMAIN 31.437 190-358
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr1.CM0064.590.nc 423 0.233 0.066 0.016 0.655 _ 3
Wolf-PSORT
chr1.CM0064.590.nc	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr1.CM0064.590.nc Twilight zone -7.843 -0.010 -1.491 2.67% -6.342