Miyakogusa Predicted Gene

chr1.CM0051.150.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0051
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2Q2R2_MEDTR 1923 89.1 92.4 (tr|A2Q2R2) Histidine acid phosphatase OS=Medicago truncatula GN=MtrDRAFT_AC151524g43v2 PE=4 SV=1
TAIR_pep AT5G15070.1 1769 82.2 89.4 | Symbols: | acid phosphatase/ oxidoreductase/ transition metal ion binding | chr5:4876901-4885618 FORWARD
Medicago IMGA|AC151524_43.5 1923 89.1 92.4 Histidine acid phosphatase chr07_pseudomolecule_IMGAG_V2 1046918-1066999 E EGN_Mt071002 20080227
Soybean Glyma18g49000.1 1934 89.6 93.1  
Lotus Consensus KMC016683A_C01 117 82.4 82.4 KMC016683A_c01
3' Unigene BP084028 636 98.6 98.6 MRL006g08_f
5' Unigene AV410454 297 100.0 100.0 MWL073b03_r
A list of protein families, domains and functional sites (searches in InterPro)
chr1.CM0051.150.nc length: 1047 aa.
IPR000560 Histidine acid phosphatase
method AccNumber shortName E-value location
Molecular Function GO:0003993 acid phosphatase activity    
HMMPfam PF00328 Acid_phosphat_A 5.2e-92 364-953
ScanRegExp PS00616 HIS_ACID_PHOSPHAT_1 8e-5 365-379
no_ID  
Coil coil coiled-coil NA 587-608
Gene3D 3.40.50.1240 no description 6.5e-11 364-584
HMMPanther PTHR12750 UNCHARACTERIZED 0 5-803
859-1047
HMMPanther PTHR12750:SF4 UNCHARACTERIZED 0 5-803
859-1047
Seg seg seg NA 382-395
838-852
superfamily SSF53254 Phosphoglycerate 1.5e-48 363-1006
superfamily SSF56059 Glutathione 1.5e-16 94-327
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr1.CM0051.150.nc 1047 0.125 0.146 0.209 0.761 _ 3
Wolf-PSORT
chr1.CM0051.150.nc	cyto 9, nucl 2, chlo 1, mito 1, plas 1, chlo_mito 1, cysk_nucl 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr1.CM0051.150.nc Not targeted -43.909 -0.988 -4.764 62.20% -38.157