Miyakogusa Predicted Gene

chr1.CM0010.310.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0010
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B3U2B5_CUCSA 324 47.4 55.1 (tr|B3U2B5) Abscisic acid insensitive OS=Cucumis sativus PE=4 SV=1
TAIR_pep AT2G36270.1 172 42.9 52.9 | Symbols: GIA1, ABI5 | ABI5 (ABA INSENSITIVE 5); DNA binding / transcription activator/ transcription factor | chr2:15212059-15213650 REVERSE
Medicago IMGA|AC147007_5.4 341 54.3 62.1 Basic-leucine zipper (bZIP) transcription factor chr07_pseudomolecule_IMGAG_V2 27971781-27973583 E EGN_Mt071002 20080227
Soybean Glyma10g08370.1 358 51.5 57.3  
Lotus Consensus KMC012729A_C01 44.1 81.7 81.7 KMC012729A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr1.CM0010.310.nd length: 422 aa.
IPR004827 Basic-leucine zipper (bZIP) transcription factor
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
HMMSmart SM00338 no description 0.0023 353-422
ScanRegExp PS00036 BZIP_BASIC 8e-5 360-375
IPR008917 Eukaryotic transcription factor, DNA-binding
superfamily SSF47454 A 3.8e-09 310-383
IPR011700 Basic leucine zipper
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF07716 bZIP_2 9.1e-05 353-419
no_ID  
Coil coil coiled-coil NA 392-423
HMMPanther PTHR22952 CAMP-RESPONSE 1.1e-06 355-411
HMMPanther PTHR22952:SF10 CYCLIC-AMP-DEPENDENT 1.1e-06 355-411
Seg seg seg NA 89-101
152-169
234-248
254-267
285-306
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr1.CM0010.310.nd 422 0.092 0.164 0.022 0.877 _ 2
Wolf-PSORT
chr1.CM0010.310.nd	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr1.CM0010.310.nd Not targeted -33.421 -0.128 -2.507 38.06% -30.787