Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012729A_C01 KMC012729A_c01
(496 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T12622 Dc3 promoter-binding factor-2 - common sunflower gi|... 81 1e-31
gb|AAK19601.1|AF334208_1 bZIP protein DPBF3 [Arabidopsis thaliana] 84 2e-31
ref|NP_191244.1| ABA-responsive element binding protein 3; prote... 82 9e-31
pir||T12585 Dc3 promoter-binding factor-3 - common sunflower (fr... 86 2e-30
ref|NP_565948.1| bZIP family transcription factor; protein id: A... 74 3e-26
>pir||T12622 Dc3 promoter-binding factor-2 - common sunflower
gi|2228773|gb|AAC49760.1| Dc3 promoter-binding factor-2
[Helianthus annuus]
Length = 174
Score = 81.3 bits (199), Expect(2) = 1e-31
Identities = 41/54 (75%), Positives = 46/54 (84%)
Frame = -2
Query: 465 PPPLMGTVSDMQIPGRKRSAPEDMVEKTVERRQKRMIKNRESAARSRARKQAYT 304
P LMG++SD + GRKR A D++EKTVERRQKRMIKNRESAARSRARKQAYT
Sbjct: 74 PTSLMGSLSDRHMSGRKRFASGDVMEKTVERRQKRMIKNRESAARSRARKQAYT 127
Score = 76.6 bits (187), Expect(2) = 1e-31
Identities = 36/49 (73%), Positives = 44/49 (89%)
Frame = -3
Query: 311 HTHNELENKVSRLEEENERLRKRKELEQMLPCTPPPEPKYQLRRIASAP 165
+TH ELENKVSRLEEENERLR+ KE+E+++P PPP+PKYQLRR +SAP
Sbjct: 126 YTH-ELENKVSRLEEENERLRREKEVEKVIPWVPPPKPKYQLRRTSSAP 173
>gb|AAK19601.1|AF334208_1 bZIP protein DPBF3 [Arabidopsis thaliana]
Length = 297
Score = 84.0 bits (206), Expect(2) = 2e-31
Identities = 43/51 (84%), Positives = 46/51 (89%)
Frame = -2
Query: 456 LMGTVSDMQIPGRKRSAPEDMVEKTVERRQKRMIKNRESAARSRARKQAYT 304
LMG +SD QIPGRKR A ++VEKTVERRQKRMIKNRESAARSRARKQAYT
Sbjct: 200 LMGGLSDTQIPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYT 250
Score = 72.8 bits (177), Expect(2) = 2e-31
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3
Query: 311 HTHNELENKVSRLEEENERLRKRKELEQMLPCTPPPEPKYQLRRIASAP 165
+TH ELE KVSRLEEENERLRK+KE+E++LP PPP+PK QLRR +SAP
Sbjct: 249 YTH-ELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKRQLRRTSSAP 296
>ref|NP_191244.1| ABA-responsive element binding protein 3; protein id: At3g56850.1,
supported by cDNA: gi_13346154, supported by cDNA:
gi_17064743, supported by cDNA: gi_20148682, supported
by cDNA: gi_9967420 [Arabidopsis thaliana]
gi|11358714|pir||T51273 promoter-binding factor-like
protein - Arabidopsis thaliana
gi|9663004|emb|CAC00748.1| promoter-binding factor-like
protein [Arabidopsis thaliana]
gi|9967421|dbj|BAB12406.1| ABA-responsive element
binding protein 3 (AREB3) [Arabidopsis thaliana]
gi|17064744|gb|AAL32526.1| promoter-binding factor-like
protein [Arabidopsis thaliana]
gi|20148683|gb|AAM10232.1| promoter-binding factor-like
protein [Arabidopsis thaliana]
Length = 297
Score = 82.0 bits (201), Expect(2) = 9e-31
Identities = 42/51 (82%), Positives = 45/51 (87%)
Frame = -2
Query: 456 LMGTVSDMQIPGRKRSAPEDMVEKTVERRQKRMIKNRESAARSRARKQAYT 304
LMG +SD Q PGRKR A ++VEKTVERRQKRMIKNRESAARSRARKQAYT
Sbjct: 200 LMGGLSDTQTPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYT 250
Score = 72.8 bits (177), Expect(2) = 9e-31
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3
Query: 311 HTHNELENKVSRLEEENERLRKRKELEQMLPCTPPPEPKYQLRRIASAP 165
+TH ELE KVSRLEEENERLRK+KE+E++LP PPP+PK QLRR +SAP
Sbjct: 249 YTH-ELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKRQLRRTSSAP 296
>pir||T12585 Dc3 promoter-binding factor-3 - common sunflower (fragment)
gi|3273764|gb|AAC24835.1| Dc3 promoter-binding factor-3
[Helianthus annuus]
Length = 246
Score = 85.9 bits (211), Expect(2) = 2e-30
Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = -2
Query: 489 YADNQVALPPP-LMGTVSDMQIPGRKRSAPEDMVEKTVERRQKRMIKNRESAARSRARKQ 313
Y + Q+A+ P LM +SD Q PGRKR A D++EKTVERRQKRMIKNRESAARSRARKQ
Sbjct: 137 YPETQMAMSPSHLMHNLSDTQTPGRKRVASGDVIEKTVERRQKRMIKNRESAARSRARKQ 196
Query: 312 AYT 304
AYT
Sbjct: 197 AYT 199
Score = 68.2 bits (165), Expect(2) = 2e-30
Identities = 32/48 (66%), Positives = 41/48 (84%)
Frame = -3
Query: 311 HTHNELENKVSRLEEENERLRKRKELEQMLPCTPPPEPKYQLRRIASA 168
+TH ELENK+SRLEEENE L+++KE+ +LP PPP+PKYQLRR +SA
Sbjct: 198 YTH-ELENKISRLEEENELLKRQKEVGMVLPSAPPPKPKYQLRRTSSA 244
>ref|NP_565948.1| bZIP family transcription factor; protein id: At2g41070.1,
supported by cDNA: 114632., supported by cDNA:
gi_13346156 [Arabidopsis thaliana]
gi|13346157|gb|AAK19602.1|AF334209_1 bZIP protein DPBF4
[Arabidopsis thaliana] gi|20197123|gb|AAD12004.2|
putative bZIP transcription factor [Arabidopsis
thaliana] gi|21536898|gb|AAM61230.1| putative bZIP
transcription factor [Arabidopsis thaliana]
gi|28317387|tpe|CAD29863.1| TPA: basic leucine zipper
transcription factor [Arabidopsis thaliana]
Length = 262
Score = 73.6 bits (179), Expect(2) = 3e-26
Identities = 42/52 (80%), Positives = 45/52 (85%), Gaps = 1/52 (1%)
Frame = -2
Query: 456 LMGTVSDM-QIPGRKRSAPEDMVEKTVERRQKRMIKNRESAARSRARKQAYT 304
+MG +SD Q PGRKR A E +VEKTVERRQKRMIKNRESAARSRARKQAYT
Sbjct: 165 MMGGLSDTPQAPGRKRVAGE-IVEKTVERRQKRMIKNRESAARSRARKQAYT 215
Score = 66.2 bits (160), Expect(2) = 3e-26
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = -3
Query: 311 HTHNELENKVSRLEEENERLRKRKELEQMLPCTPPPEPKYQLRRIASAPL 162
+TH ELE KVSRLEEENE+LR+ KE+E++LP PPP+PK++LRR SA L
Sbjct: 214 YTH-ELEIKVSRLEEENEKLRRLKEVEKILPSEPPPDPKWKLRRTNSASL 262
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 432,223,724
Number of Sequences: 1393205
Number of extensions: 9464406
Number of successful extensions: 38078
Number of sequences better than 10.0: 324
Number of HSP's better than 10.0 without gapping: 35492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37968
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
