Miyakogusa Predicted Gene

chr1.CM0178.110.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0178.110.nd
         (7115 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BP062717  GENLf007e01                                                 165   1e-39
KMC000077A_C02 KMC000077A_c02                                          68   2e-10
KMC001483A_C02 KMC001483A_c02                                          48   2e-04
BP052413  SPDL007d11_f                                                 46   0.001

>BP062717  GENLf007e01;
          Length = 567

 Score =  165 bits (83), Expect = 1e-39
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 5929 aagaacaagatggagaggtttctccatgctgggcacttctcagttgcttcaatttatgca 5988
            ||||||| ||||||||||||||||||||||||   ||| ||||||||||||||||||  |
Sbjct: 541  aagaacaggatggagaggtttctccatgctggatgcttttcagttgcttcaatttataga 482

                                                                        
Query: 5989 ccaatttcatttcctcctcttcctacgataatcctaaaaagagatggagaggatgctgca 6048
            || | ||||||||||| |||| |||||||||||||||| |||  ||||||||||||||||
Sbjct: 481  ccnaattcatttcctcatctttctacgataatcctaaagagacttggagaggatgctgca 422

                                                  
Query: 6049 cccagagtggctgctgttggctcactgaaaaccgttga 6086
            ||   ||||||||  |||||||||||||||||||||||
Sbjct: 421  cctgcagtggctgaagttggctcactgaaaaccgttga 384



 Score = 52.0 bits (26), Expect = 1e-05
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 6550 agcctgtagagctttataccaaacgtggtcttcgtggccggattaaggaacctgttggta 6609
            |||||| |||||| |||||| | |||||||||||||| || ||||| ||| | || ||||
Sbjct: 319  agcctgcagagctatatacccatcgtggtcttcgtgggcgaattaaagaatccgtaggta 260

                  
Query: 6610 cacatg 6615
            ||||||
Sbjct: 259  cacatg 254


>KMC000077A_C02 KMC000077A_c02;
          Length = 608

 Score = 67.9 bits (34), Expect = 2e-10
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                      
Query: 1703 aaaggcttaaagttcctcattggagaactcaacgatcttaccttatggctcaaaaggt 1760
            |||||||||||||| | |||||||||||||||||||| ||||| || ||| |||||||
Sbjct: 482  aaaggcttaaagtttcacattggagaactcaacgatcatacctcattgcttaaaaggt 425


>KMC001483A_C02 KMC001483A_c02;
          Length = 584

 Score = 48.1 bits (24), Expect = 2e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 1881 tcacttagtgggacaaggcttttgttgttattgttgttgt 1920
            |||||||||| || ||||||||||||||| || |||||||
Sbjct: 165  tcacttagtgagataaggcttttgttgttgttattgttgt 126


>BP052413  SPDL007d11_f;
          Length = 419

 Score = 46.1 bits (23), Expect = 0.001
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 1883 acttagtgggacaaggcttttgttgtt 1909
            ||||||||||| |||||||||||||||
Sbjct: 138  acttagtgggataaggcttttgttgtt 112