Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001483A_C02 KMC001483A_c02
(584 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564170.1| UDP-glucose glucosyltransferase, putative; prot... 115 3e-25
pir||F86356 T16E15.2 protein - Arabidopsis thaliana gi|9392678|g... 115 3e-25
ref|NP_173652.1| UDP-glucose glucosyltransferase, putative; prot... 111 8e-24
pir||D86356 hypothetical protein T16E15.4 - Arabidopsis thaliana... 110 1e-23
pir||G86356 hypothetical protein T16E15.1 - Arabidopsis thaliana... 109 2e-23
>ref|NP_564170.1| UDP-glucose glucosyltransferase, putative; protein id: At1g22370.1,
supported by cDNA: gi_14532545, supported by cDNA:
gi_18655386 [Arabidopsis thaliana]
gi|14532546|gb|AAK64001.1| At1g22370/T16E15_3
[Arabidopsis thaliana] gi|18655387|gb|AAL76149.1|
At1g22370/T16E15_3 [Arabidopsis thaliana]
Length = 309
Score = 115 bits (289), Expect = 3e-25
Identities = 54/94 (57%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Frame = -1
Query: 584 SICAGVPMLCWPFFSDQPTNCKWICNEWDIGMEIDTNVKREEVEKLITELMVEEKGKKMK 405
S+ GVPM+CWPFF++Q TNCK+ C+EW++GMEI +V+REEVE+L+ ELM +KGKKM+
Sbjct: 214 SLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEIGGDVRREEVEELVRELMDGDKGKKMR 273
Query: 404 QKAMELKKKAEEDTRP-GGCSYLNLDIVIKEVLL 306
QKA E ++ AEE T+P G S LN +V+ +VLL
Sbjct: 274 QKAEEWQRLAEEATKPIYGSSELNFQMVVDKVLL 307
>pir||F86356 T16E15.2 protein - Arabidopsis thaliana
gi|9392678|gb|AAF87255.1|AC068562_2 Strong similarity to
UDP-glucose glucosyltransferase from Arabidopsis
thaliana gb|AB016819 and contains a UDP-glucosyl
transferase PF|00201 domain. ESTs gb|U74128,
gb|AA713257 come from this gene
Length = 479
Score = 115 bits (289), Expect = 3e-25
Identities = 54/94 (57%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Frame = -1
Query: 584 SICAGVPMLCWPFFSDQPTNCKWICNEWDIGMEIDTNVKREEVEKLITELMVEEKGKKMK 405
S+ GVPM+CWPFF++Q TNCK+ C+EW++GMEI +V+REEVE+L+ ELM +KGKKM+
Sbjct: 384 SLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEIGGDVRREEVEELVRELMDGDKGKKMR 443
Query: 404 QKAMELKKKAEEDTRP-GGCSYLNLDIVIKEVLL 306
QKA E ++ AEE T+P G S LN +V+ +VLL
Sbjct: 444 QKAEEWQRLAEEATKPIYGSSELNFQMVVDKVLL 477
>ref|NP_173652.1| UDP-glucose glucosyltransferase, putative; protein id: At1g22340.1
[Arabidopsis thaliana] gi|25286820|pir||C86356
UDP-glucose glucosyltransferase homolog - Arabidopsis
thaliana gi|9392680|gb|AAF87257.1|AC068562_4 Strong
similarity to UDP-glucose glucosyltransferase from
Arabidopsis thaliana gb|AB016819 and contains a
UDP-glucosyl transferase PF|00201 domain
Length = 487
Score = 111 bits (277), Expect = 8e-24
Identities = 52/95 (54%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = -1
Query: 584 SICAGVPMLCWPFFSDQPTNCKWICNEWDIGMEIDTNVKREEVEKLITELMVEEKGKKMK 405
S+ GVPM+CWP FS+QPTNCK+ C+EW +G+EI +VKREEVE ++ ELM EKGKK++
Sbjct: 390 SLAGGVPMICWPCFSEQPTNCKFCCDEWGVGIEIGKDVKREEVETVVRELMDGEKGKKLR 449
Query: 404 QKAMELKKKAEEDTR-PGGCSYLNLDIVIKEVLLK 303
+KA E ++ AEE TR G S +NL+ +I +V L+
Sbjct: 450 EKAEEWRRLAEEATRYKHGSSVMNLETLIHKVFLE 484
>pir||D86356 hypothetical protein T16E15.4 - Arabidopsis thaliana
gi|9392681|gb|AAF87258.1|AC068562_5 Strong similarity to
UDP-glucose glucosyltransferase from Arabidopsis
thaliana gb|AB016819 and contains a UDP-glucosyl
transferase PF|00201 domain
Length = 450
Score = 110 bits (275), Expect = 1e-23
Identities = 50/96 (52%), Positives = 73/96 (75%), Gaps = 1/96 (1%)
Frame = -1
Query: 584 SICAGVPMLCWPFFSDQPTNCKWICNEWDIGMEIDTNVKREEVEKLITELMVEEKGKKMK 405
SI GVP++CWPFF++Q TNCK+ C+EW +G+EI +VKREEVE ++ ELM EKGKKM+
Sbjct: 355 SISGGVPIICWPFFAEQQTNCKFCCDEWGVGVEIGGDVKREEVETVVRELMDREKGKKMR 414
Query: 404 QKAMELKKKAEEDT-RPGGCSYLNLDIVIKEVLLKQ 300
+KA+E ++ A E T G S +N + V+++VLL++
Sbjct: 415 EKAVEWRRLANEATEHKHGSSVVNFETVVRKVLLRE 450
>pir||G86356 hypothetical protein T16E15.1 - Arabidopsis thaliana
gi|9392677|gb|AAF87254.1|AC068562_1 Strong similarity to
UDP-glucose glucosyltransferase from Arabidopsis
thaliana gb|AB016819 and contains a UDP-glucosyl
transferase PF|00201 domain. This gene is cut off
Length = 170
Score = 109 bits (273), Expect = 2e-23
Identities = 49/94 (52%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = -1
Query: 584 SICAGVPMLCWPFFSDQPTNCKWICNEWDIGMEIDTNVKREEVEKLITELMVEEKGKKMK 405
S+ GVPM+CWPFF++Q TNCK+ C+EW++G+EI +VKR EVE ++ ELM EKGKKM+
Sbjct: 71 SLSCGVPMVCWPFFAEQQTNCKFSCDEWEVGIEIGGDVKRGEVEAVVRELMDGEKGKKMR 130
Query: 404 QKAMELKKKAEEDTR-PGGCSYLNLDIVIKEVLL 306
+KA+E ++ AE+ T+ P G S +N + ++ +VLL
Sbjct: 131 EKAVEWRRLAEKATKLPCGSSVINFETIVNKVLL 164
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,365,356
Number of Sequences: 1393205
Number of extensions: 11055654
Number of successful extensions: 38611
Number of sequences better than 10.0: 400
Number of HSP's better than 10.0 without gapping: 35221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38272
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
