Miyakogusa Predicted Gene

chr1.CM0410.180.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0410.180.nc
         (4620 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC002661A_C02 KMC002661A_c02                                          70   4e-11
AV767211  MWM160e08_f                                                  66   6e-10
BP047782  SPD047h10_f                                                  62   1e-08
AV779789  MPDL065a06_f                                                 58   2e-07
KMC011471A_C01 KMC011471A_c01                                          48   2e-04
KMC002328A_C01 KMC002328A_c01                                          46   6e-04

>KMC002661A_C02 KMC002661A_c02;
          Length = 1017

 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 3344 ggccccgtttggaagagcttatttgagcttatcttataacata 3386
            |||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 386  ggccccgtttggaagagcttatttgagcttatctgatagcata 344


>AV767211  MWM160e08_f;
          Length = 419

 Score = 65.9 bits (33), Expect = 6e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                             
Query: 3338 gattatggccccgtttggaagagcttatttgagcttatcttataacata 3386
            ||||| ||||| |||||||||||||||||||||||||||| ||| ||||
Sbjct: 134  gattaaggcccagtttggaagagcttatttgagcttatctgatagcata 182


>BP047782  SPD047h10_f;
          Length = 479

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 3344 ggccccgtttggaagagcttatttgagcttatcttataacata 3386
            ||||||||| |||||||||||||||||||||||| ||| ||||
Sbjct: 89   ggccccgttgggaagagcttatttgagcttatctgatagcata 131


>AV779789  MPDL065a06_f;
          Length = 560

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 3354 ggaagagcttatttgagcttatcttataacata 3386
            |||||||||||||| ||||||||||||||||||
Sbjct: 60   ggaagagcttatttaagcttatcttataacata 92


>KMC011471A_C01 KMC011471A_c01;
          Length = 563

 Score = 48.1 bits (24), Expect = 2e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 882 agtggaagcggatatgtcggcggtggtgctggtggtggtg 921
           ||||||||||||  | |||||||||||| |||||||||||
Sbjct: 472 agtggaagcggaggtttcggcggtggtggtggtggtggtg 433


>KMC002328A_C01 KMC002328A_c01;
          Length = 623

 Score = 46.1 bits (23), Expect = 6e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 3350 gtttggaagagcttatttgagct 3372
            |||||||||||||||||||||||
Sbjct: 23   gtttggaagagcttatttgagct 1