Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002661A_C02 KMC002661A_c02
(1017 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177742.2| hypothetical protein; protein id: At1g76150.1, ... 259 4e-68
ref|NP_077368.1| peroxisomal multifunctional enzyme type II [Rat... 138 2e-31
ref|NP_032318.1| hydroxysteroid (17-beta) dehydrogenase 4; hydro... 137 3e-31
dbj|BAB23627.1| unnamed protein product [Mus musculus] gi|183809... 137 3e-31
ref|NP_000405.1| hydroxysteroid (17-beta) dehydrogenase 4 [Homo ... 136 5e-31
>ref|NP_177742.2| hypothetical protein; protein id: At1g76150.1, supported by cDNA:
gi_17979530, supported by cDNA: gi_20147244 [Arabidopsis
thaliana] gi|17979531|gb|AAL50100.1| At1g76150/T23E18_38
[Arabidopsis thaliana] gi|20147245|gb|AAM10336.1|
At1g76150/T23E18_38 [Arabidopsis thaliana]
Length = 309
Score = 259 bits (663), Expect = 4e-68
Identities = 122/164 (74%), Positives = 144/164 (87%)
Frame = -3
Query: 1015 CMNRSTVYLRGSGGFSNSSKPFSYSNYPLNQTSAVKIPDSKPFSVFEDHTQASQALLYRL 836
CMNR+TV+LRG+GGFSNSS+PFSY NYP NQ AVKIP +P +V E+ TQ SQALLYRL
Sbjct: 146 CMNRTTVFLRGAGGFSNSSQPFSYKNYPSNQGLAVKIPQRQPLTVCEERTQPSQALLYRL 205
Query: 835 SGDYNPLHSDPMIAKVAGFSQPILHGLCTLGFAVRAIIKNICKGDPDMIKSIAGRFLLHV 656
SGDYNPLHSDP AK+AGF +PILHGLCTLGFA++AIIK +CKGDP +K+I+GRFL V
Sbjct: 206 SGDYNPLHSDPEFAKLAGFPRPILHGLCTLGFAIKAIIKCVCKGDPTAVKTISGRFLTTV 265
Query: 655 YPGETLVTEMWLEGLRVIYRTMVKERKRTVLSGYVDLRGLTSSL 524
+PGETL+TEMWLEGLRVIY+T VKER +TVL+GYVD+RGL+SSL
Sbjct: 266 FPGETLITEMWLEGLRVIYQTKVKERNKTVLAGYVDIRGLSSSL 309
>ref|NP_077368.1| peroxisomal multifunctional enzyme type II [Rattus norvegicus]
gi|1592545|gb|AAB09724.1| peroxisomal multifunctional
enzyme type II
Length = 735
Score = 138 bits (347), Expect = 2e-31
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 1/158 (0%)
Frame = -3
Query: 1015 CMNRSTVYLRGSGGFSNSSKPFSYSNYPLNQTSAVKIPDSKPFSVFEDHTQASQALLYRL 836
C N+ +V++ GSGGF +AV +PD P +V D T +QA LYRL
Sbjct: 454 CYNQFSVFVVGSGGFGGKRTSEKLK-------AAVAVPDRPPDAVLRDTTSLNQAALYRL 506
Query: 835 SGDYNPLHSDPMIAKVAGFSQPILHGLCTLGFAVRAIIKNICKGDPDMIKSIAGRFLLHV 656
SGD NPLH DP A +AGF +PILHGLCT GF+ R +++ D K+I RF V
Sbjct: 507 SGDSNPLHIDPSFASIAGFEKPILHGLCTFGFSARHVLQQFADNDVSRFKAIKVRFAKPV 566
Query: 655 YPGETLVTEMWLEGLRVIYRTMVKERKRTVLS-GYVDL 545
YPG+TL TEMW EG R+ ++T V+E V+S YVDL
Sbjct: 567 YPGQTLQTEMWKEGNRIHFQTKVQETGDIVISNAYVDL 604
>ref|NP_032318.1| hydroxysteroid (17-beta) dehydrogenase 4; hydroxysteroid 17-beta
dehydrogenase 4; D-bifunctional protein; multifunctional
protein 2 [Mus musculus] gi|1706397|sp|P51660|DHB4_MOUSE
Estradiol 17 beta-dehydrogenase 4 (17-beta-HSD 4)
(17-beta-hydroxysteroid dehydrogenase 4)
gi|1213008|emb|CAA62015.1| 17beta-hydroxysteroid
dehydrogenase IV [Mus musculus]
Length = 735
Score = 137 bits (344), Expect = 3e-31
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 1/158 (0%)
Frame = -3
Query: 1015 CMNRSTVYLRGSGGFSNSSKPFSYSNYPLNQTSAVKIPDSKPFSVFEDHTQASQALLYRL 836
C N+ +V++ GSGGF +AV +P+ P +V D T +QA LYRL
Sbjct: 454 CYNQFSVFVVGSGGFGGKRTSEKLK-------AAVAVPNRPPDAVLRDATSLNQAALYRL 506
Query: 835 SGDYNPLHSDPMIAKVAGFSQPILHGLCTLGFAVRAIIKNICKGDPDMIKSIAGRFLLHV 656
SGD+NPLH DP A VAGF +PILHGLCT GF+ R +++ D K+I RF V
Sbjct: 507 SGDWNPLHIDPDFASVAGFEKPILHGLCTFGFSARHVLQQFADNDVSRFKAIKVRFAKPV 566
Query: 655 YPGETLVTEMWLEGLRVIYRTMVKERKRTVLS-GYVDL 545
YPG+TL TEMW EG R+ ++T V E V+S YVDL
Sbjct: 567 YPGQTLQTEMWKEGNRIHFQTKVHETGDVVISNAYVDL 604
>dbj|BAB23627.1| unnamed protein product [Mus musculus] gi|18380947|gb|AAH22175.1|
hydroxysteroid 17-beta dehydrogenase 4 [Mus musculus]
gi|26353374|dbj|BAC40317.1| unnamed protein product [Mus
musculus]
Length = 735
Score = 137 bits (344), Expect = 3e-31
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 1/158 (0%)
Frame = -3
Query: 1015 CMNRSTVYLRGSGGFSNSSKPFSYSNYPLNQTSAVKIPDSKPFSVFEDHTQASQALLYRL 836
C N+ +V++ GSGGF +AV +P+ P +V D T +QA LYRL
Sbjct: 454 CYNQFSVFVVGSGGFGGKRTSEKLK-------AAVAVPNRPPDAVLRDATSLNQAALYRL 506
Query: 835 SGDYNPLHSDPMIAKVAGFSQPILHGLCTLGFAVRAIIKNICKGDPDMIKSIAGRFLLHV 656
SGD+NPLH DP A VAGF +PILHGLCT GF+ R +++ D K+I RF V
Sbjct: 507 SGDWNPLHIDPDFASVAGFEKPILHGLCTFGFSARHVLQQFADNDVSRFKAIKVRFAKPV 566
Query: 655 YPGETLVTEMWLEGLRVIYRTMVKERKRTVLS-GYVDL 545
YPG+TL TEMW EG R+ ++T V E V+S YVDL
Sbjct: 567 YPGQTLQTEMWKEGNRIHFQTKVHETGDVVISNAYVDL 604
>ref|NP_000405.1| hydroxysteroid (17-beta) dehydrogenase 4 [Homo sapiens]
gi|1706396|sp|P51659|DHB4_HUMAN Estradiol 17
beta-dehydrogenase 4 (17-beta-HSD 4)
(17-beta-hydroxysteroid dehydrogenase 4)
gi|2134658|pir||S59136 estradiol 17beta-dehydrogenase (EC
1.1.1.62) type 4 - human gi|1050517|emb|CAA60643.1|
17beta-hydroxysteroid dehydrogenase [Homo sapiens]
gi|4165049|gb|AAD08652.1| 17-beta-hydroxysteroid
dehydrogenase IV [Homo sapiens]
gi|13111861|gb|AAH03098.1|AAH03098 hydroxysteroid
(17-beta) dehydrogenase 4 [Homo sapiens]
Length = 736
Score = 136 bits (343), Expect = 5e-31
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 1/158 (0%)
Frame = -3
Query: 1015 CMNRSTVYLRGSGGFSNSSKPFSYSNYPLNQTSAVKIPDSKPFSVFEDHTQASQALLYRL 836
C N+ +++L GSGGF AV IP+ P +V D T +QA LYRL
Sbjct: 455 CHNQFSLFLVGSGGFGGKRTSDKVK-------VAVAIPNRPPDAVLTDTTSLNQAALYRL 507
Query: 835 SGDYNPLHSDPMIAKVAGFSQPILHGLCTLGFAVRAIIKNICKGDPDMIKSIAGRFLLHV 656
SGD+NPLH DP A +AGF +PILHGLCT GF+ R +++ D K+I RF V
Sbjct: 508 SGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQFADNDVSRFKAIKARFAKPV 567
Query: 655 YPGETLVTEMWLEGLRVIYRTMVKERKRTVLS-GYVDL 545
YPG+TL TEMW EG R+ ++T V+E V+S YVDL
Sbjct: 568 YPGQTLQTEMWKEGNRIHFQTKVQETGDIVISNAYVDL 605
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 784,936,858
Number of Sequences: 1393205
Number of extensions: 15617633
Number of successful extensions: 28973
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 28028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28917
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 59049410978
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
