Miyakogusa Predicted Gene

Lj6g3v1692780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVC4_SOYBN 652 82.4 90.8 (tr|I1LVC4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G16390.1 524 66.7 80.0 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing protein / helicase domain-containing protein | chr2:7097638-7101182 FORWARD LENGTH=888
Medicago Medtr8g037345.1 634 81.1 88.4 | chromatin remodeling complex subunit | HC | chr8:13958611-13951546 | 20130731
Soybean Glyma12g36460.1 652 82.4 90.8  
LJGI gnl|LJGI|BW594572 615 100.0 100.0 similar to UniRef100_A7NXX0 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1692780.1 length: 379 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 2.5e-19 5-194
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
ProfileScan PS51192 HELICASE_ATP_BIND_1 10.987 1-158
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-11 1-217
220-378
no_ID  
HMMPanther PTHR10799 SWI/SNF-RELATED 2e-134 1-379
HMMPanther PTHR10799:SF41 ATP 2e-134 1-379
Seg seg seg NA 349-360
Wolf-PSORT
Lj6g3v1692780.1	chlo 12, nucl 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1692780.1