Miyakogusa Predicted Gene

Lj6g3v1692780.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1692780.1 Non Chatacterized Hit- tr|I1LVC4|I1LVC4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26386 PE,85.26,0,ATP
BINDING / DNA BINDING / HELICASE,NULL; SWI/SNF-RELATED
MATRIX-ASSOCIATED ACTIN-DEPENDENT
REGULAT,NODE_70953_length_1154_cov_63.438477.path2.1
         (1137 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW594572 similar to UniRef100_A7NXX0 Cluster: Chromosom...   615   e-175
gnl|LJGI|TC78397 similar to UniRef100_A7P7U3 Cluster: Chromosome...   478   e-134

>gnl|LJGI|BW594572 similar to UniRef100_A7NXX0 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 459

 Score =  615 bits (310), Expect = e-175
 Identities = 310/310 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgataatcagcttcatgcaaagttttctaggaaagtacccaaatgctagacctctggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atgataatcagcttcatgcaaagttttctaggaaagtacccaaatgctagacctctggtg 209

                                                                       
Query: 61  gtgcttcccaagggaatactatctacttggaaaaaggagtttcagacatggcaagtggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtgcttcccaagggaatactatctacttggaaaaaggagtttcagacatggcaagtggag 269

                                                                       
Query: 121 gacataccactttacgatttttacactgtgaaggcagacagtagatcacagcagttggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gacataccactttacgatttttacactgtgaaggcagacagtagatcacagcagttggaa 329

                                                                       
Query: 181 gttttgaaacaatgggtggaatgcaagagcatccttttcttggggtacaagcagttctct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gttttgaaacaatgggtggaatgcaagagcatccttttcttggggtacaagcagttctct 389

                                                                       
Query: 241 tcaattgtctgtgataatagtactaacagcatatcaatatcttgccaagatatattgctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcaattgtctgtgataatagtactaacagcatatcaatatcttgccaagatatattgctt 449

                     
Query: 301 aaggtacctt 310
           ||||||||||
Sbjct: 450 aaggtacctt 459


>gnl|LJGI|TC78397 similar to UniRef100_A7P7U3 Cluster: Chromosome chr3 scaffold_8,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr3 scaffold_8, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (32%)
          Length = 925

 Score =  478 bits (241), Expect = e-134
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                        
Query: 897  agatggagtgaagtcgaaattcttcatgaacattctaaacttgtgtgattcatccaacga 956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    agatggagtgaagtcgaaattcttcatgaacattctaaacttgtgtgattcatccaacga 64

                                                                        
Query: 957  gaagcttctggtgttcagccaatatctcttacctttgaaatatttagagaggttagttat 1016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   gaagcttctggtgttcagccaatatctcttacctttgaaatatttagagaggttagttat 124

                                                                        
Query: 1017 gaaatggaaaggttggagttttgggaaagaaatcttcggaatctcaggggaatctagctc 1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125  gaaatggaaaggttggagttttgggaaagaaatcttcggaatctcaggggaatctagctc 184

                                                                        
Query: 1077 tgagcaaagggagtggtccatgaataaattcaacaattcaccggatgctaaaattttctt 1136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185  tgagcaaagggagtggtccatgaataaattcaacaattcaccggatgctaaaattttctt 244

             
Query: 1137 t 1137
            |
Sbjct: 245  t 245