Miyakogusa Predicted Gene

Lj6g3v1368660.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1L1A1_SOYBN 500 86.0 90.9 (tr|I1L1A1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G57360.1 436 75.3 83.7 | Symbols: ZTL, LKP1, ADO1, FKL2 | Galactose oxidase/kelch repeat superfamily protein | chr5:23241597-23244256 FORWARD LENGTH=609
Medicago Medtr2g036510.1 498 84.6 90.9 | galactose oxidase/kelch repeat protein | HC | chr2:15805460-15796841 | 20130731
Soybean Glyma09g06220.1 500 86.0 90.9  
LJGI gnl|LJGI|FS321080 1098 100.0 100.0 similar to UniRef100_Q2PQA6 Cluster: ZTL; n=1; Ipomoea nil|Rep: ZTL - Ipomoea nil (Japanese morning glory) (Pharbitis nil), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1368660.2 length: 350 aa.
IPR000014 PAS domain
method AccNumber shortName E-value location
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
HMMTigr TIGR00229 sensory_box: 1.5e-07 38-147
ProfileScan PS50112 PAS 12.518 33-108
superfamily SSF55785 PYP-like 5e-23 36-149
IPR001810 F-box domain, cyclin-like
Molecular Function GO:0005515 protein binding    
superfamily SSF81383 F-box 4e-10 189-256
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 5.7e-10 200-278
Gene3D G3DSA:3.30.450.20 no description 1.4e-28 39-148
HMMPanther PTHR23244 KELCH 5.5e-162 46-311
HMMPanther PTHR23244:SF9 ADAGIO 5.5e-162 46-311
HMMPfam PF12937 F-box-like 3.5e-06 207-245
HMMPfam PF13426 PAS_9 3.5e-20 38-147
Seg seg seg NA 4-25
269-281
Wolf-PSORT
Lj6g3v1368660.2	nucl 6.5, cyto_nucl 5.5, cyto 3.5, chlo 1, extr 1, cysk 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1368660.2