Miyakogusa Predicted Gene
- Lj6g3v1368660.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1368660.2 tr|B6K1D4|B6K1D4_SCHJY PAS family protein
OS=Schizosaccharomyces japonicus (strain yFS275 /
FY16936),37.5,1e-18,sensory_box: PAS domain S-box protein,PAS domain;
seg,NULL; no description,NULL; PAS_9,NULL; F-box-l,CUFF.59981.2
(1053 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS321080 similar to UniRef100_Q2PQA6 Cluster: ZTL; n=1;... 1098 0.0
gnl|LJGI|TC82004 similar to UniRef100_A7Q6D0 Cluster: Chromosome... 963 0.0
gnl|LJGI|TC59193 similar to UniRef100_A7P3V7 Cluster: Chromosome... 62 7e-09
>gnl|LJGI|FS321080 similar to UniRef100_Q2PQA6 Cluster: ZTL; n=1; Ipomoea nil|Rep: ZTL
- Ipomoea nil (Japanese morning glory) (Pharbitis nil),
partial (26%)
Length = 759
Score = 1098 bits (554), Expect = 0.0
Identities = 554/554 (100%)
Strand = Plus / Plus
Query: 1 atggagtgggacagcaattccgattacagcggcgacgacgacgacgcctcctcctctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atggagtgggacagcaattccgattacagcggcgacgacgacgacgcctcctcctctttc 265
Query: 61 ctcctaaacgacgacgtcggacccatccctttccctgtcctccaaaccgcgccctgcgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctcctaaacgacgacgtcggacccatccctttccctgtcctccaaaccgcgccctgcgga 325
Query: 121 ttcgtcgtcaccgacgctcttgagcatgaccatcctatcatctacgtcaacgccgttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttcgtcgtcaccgacgctcttgagcatgaccatcctatcatctacgtcaacgccgttttc 385
Query: 181 gagatgctcactggctaccgcgccgaagaagtgctcggtcgcaactgccgtttcttgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gagatgctcactggctaccgcgccgaagaagtgctcggtcgcaactgccgtttcttgcag 445
Query: 241 tgtcgaggtccgtttgctaagagaaggcatccattggtggactcaacagtagtttcagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgtcgaggtccgtttgctaagagaaggcatccattggtggactcaacagtagtttcagaa 505
Query: 301 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 565
Query: 361 gatgggactccacttatgaacagattgaggctgacacctatatatggagatgatgatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gatgggactccacttatgaacagattgaggctgacacctatatatggagatgatgatgag 625
Query: 421 ataattcatgtcattggaatccagctcttcacagaggccaacattgatcttggtcctgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ataattcatgtcattggaatccagctcttcacagaggccaacattgatcttggtcctgtt 685
Query: 481 ccgggttctacaataaaggaatctgttaaatcatcagatgggtttcattctttcctgtcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccgggttctacaataaaggaatctgttaaatcatcagatgggtttcattctttcctgtcc 745
Query: 541 acattgcatcctct 554
||||||||||||||
Sbjct: 746 acattgcatcctct 759
>gnl|LJGI|TC82004 similar to UniRef100_A7Q6D0 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 728
Score = 963 bits (486), Expect = 0.0
Identities = 486/486 (100%)
Strand = Plus / Plus
Query: 1 atggagtgggacagcaattccgattacagcggcgacgacgacgacgcctcctcctctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atggagtgggacagcaattccgattacagcggcgacgacgacgacgcctcctcctctttc 302
Query: 61 ctcctaaacgacgacgtcggacccatccctttccctgtcctccaaaccgcgccctgcgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctcctaaacgacgacgtcggacccatccctttccctgtcctccaaaccgcgccctgcgga 362
Query: 121 ttcgtcgtcaccgacgctcttgagcatgaccatcctatcatctacgtcaacgccgttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttcgtcgtcaccgacgctcttgagcatgaccatcctatcatctacgtcaacgccgttttc 422
Query: 181 gagatgctcactggctaccgcgccgaagaagtgctcggtcgcaactgccgtttcttgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gagatgctcactggctaccgcgccgaagaagtgctcggtcgcaactgccgtttcttgcag 482
Query: 241 tgtcgaggtccgtttgctaagagaaggcatccattggtggactcaacagtagtttcagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tgtcgaggtccgtttgctaagagaaggcatccattggtggactcaacagtagtttcagaa 542
Query: 301 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 602
Query: 361 gatgggactccacttatgaacagattgaggctgacacctatatatggagatgatgatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gatgggactccacttatgaacagattgaggctgacacctatatatggagatgatgatgag 662
Query: 421 ataattcatgtcattggaatccagctcttcacagaggccaacattgatcttggtcctgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ataattcatgtcattggaatccagctcttcacagaggccaacattgatcttggtcctgtt 722
Query: 481 ccgggt 486
||||||
Sbjct: 723 ccgggt 728
>gnl|LJGI|TC59193 similar to UniRef100_A7P3V7 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 1524
Score = 61.9 bits (31), Expect = 7e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 301 attagaagatgtcttgaggaaggggttgaattccaaggtgagttgctgaactttaggaaa 360
||||||||||||||||||||||| |||| ||||||||||| | ||||| || |||||
Sbjct: 470 attagaagatgtcttgaggaaggtattgagttccaaggtgaacttctgaatttcaggaag 529
Query: 361 gatgggactcc 371
||||| |||||
Sbjct: 530 gatggtactcc 540