Miyakogusa Predicted Gene
- Lj6g3v1368660.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1368660.2 tr|B6K1D4|B6K1D4_SCHJY PAS family protein
OS=Schizosaccharomyces japonicus (strain yFS275 /
FY16936),37.5,1e-18,sensory_box: PAS domain S-box protein,PAS domain;
seg,NULL; no description,NULL; PAS_9,NULL; F-box-l,CUFF.59981.2
(350 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G57360.1 | Symbols: ZTL, LKP1, ADO1, FKL2 | Galactose oxidase... 436 e-122
AT5G57360.2 | Symbols: ZTL, LKP1, ADO1, FKL2 | Galactose oxidase... 434 e-122
AT2G18915.2 | Symbols: LKP2, ADO2 | LOV KELCH protein 2 | chr2:8... 388 e-108
AT2G18915.1 | Symbols: LKP2, ADO2 | LOV KELCH protein 2 | chr2:8... 357 7e-99
AT1G68050.1 | Symbols: ADO3, FKF1 | flavin-binding, kelch repeat... 317 7e-87
AT5G58140.3 | Symbols: PHOT2, NPL1 | phototropin 2 | chr5:235247... 96 4e-20
AT5G58140.1 | Symbols: PHOT2, NPL1 | phototropin 2 | chr5:235247... 96 4e-20
AT5G58140.2 | Symbols: PHOT2, NPL1 | phototropin 2 | chr5:235247... 96 4e-20
AT5G58140.4 | Symbols: PHOT2, NPL1 | phototropin 2 | chr5:235247... 96 4e-20
AT3G45780.2 | Symbols: PHOT1, NPH1, JK224, RPT1 | phototropin 1 ... 90 2e-18
AT3G45780.1 | Symbols: PHOT1, NPH1, JK224, RPT1 | phototropin 1 ... 90 2e-18
AT2G02710.2 | Symbols: PLP, PLPA | PAS/LOV protein B | chr2:7588... 75 8e-14
AT2G02710.1 | Symbols: PLP, PLPB | PAS/LOV protein B | chr2:7588... 75 9e-14
AT2G02710.3 | Symbols: PLP, PLPC | PAS/LOV protein B | chr2:7589... 75 9e-14
>AT5G57360.1 | Symbols: ZTL, LKP1, ADO1, FKL2 | Galactose
oxidase/kelch repeat superfamily protein |
chr5:23241597-23244256 FORWARD LENGTH=609
Length = 609
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/288 (75%), Positives = 241/288 (83%), Gaps = 11/288 (3%)
Query: 27 GPIPFPV---LQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRG 83
GPIP+PV L TAPCGFVVTDA+E D PIIYVN VFEM+TGYRAEEVLG NCRFLQCRG
Sbjct: 30 GPIPYPVGNLLHTAPCGFVVTDAVEPDQPIIYVNTVFEMVTGYRAEEVLGGNCRFLQCRG 89
Query: 84 PFAKRRHPLVDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIH 143
PFAKRRHPLVDS VVSEIR+C++EG+EFQGELLNFRKDG+PLMNRLRLTPIYGDDD I H
Sbjct: 90 PFAKRRHPLVDSMVVSEIRKCIDEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDDTITH 149
Query: 144 VIGIQLFTEANIDLGPVPGSTIKESVKSSDGFHSFLSTLHPLPAGDRNVTRGVCGILQLS 203
+IGIQ F E +IDLGPV GS+ KE KS DG +S L+ AG+RNV+RG+CG+ QLS
Sbjct: 150 IIGIQFFIETDIDLGPVLGSSTKE--KSIDGIYSALA------AGERNVSRGMCGLFQLS 201
Query: 204 EEVLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRMVCQNAWGSETTRVLETVPGAK 263
+EV+ +KIL+RLTPRD+AS+ SV RRLY LTKNEDLWR VCQNAWGSETTRVLETVPGAK
Sbjct: 202 DEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRVLETVPGAK 261
Query: 264 RLGWGXXXXXXXXXXXXXWRKLTVGGGVEPSRCNFSACAVGNRVVLFG 311
RLGWG WRKL+VGG VEPSRCNFSACAVGNRVVLFG
Sbjct: 262 RLGWGRLARELTTLEAAAWRKLSVGGSVEPSRCNFSACAVGNRVVLFG 309
>AT5G57360.2 | Symbols: ZTL, LKP1, ADO1, FKL2 | Galactose
oxidase/kelch repeat superfamily protein |
chr5:23241597-23244415 FORWARD LENGTH=626
Length = 626
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/288 (75%), Positives = 241/288 (83%), Gaps = 11/288 (3%)
Query: 27 GPIPFPV---LQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRG 83
GPIP+PV L TAPCGFVVTDA+E D PIIYVN VFEM+TGYRAEEVLG NCRFLQCRG
Sbjct: 30 GPIPYPVGNLLHTAPCGFVVTDAVEPDQPIIYVNTVFEMVTGYRAEEVLGGNCRFLQCRG 89
Query: 84 PFAKRRHPLVDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIH 143
PFAKRRHPLVDS VVSEIR+C++EG+EFQGELLNFRKDG+PLMNRLRLTPIYGDDD I H
Sbjct: 90 PFAKRRHPLVDSMVVSEIRKCIDEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDDTITH 149
Query: 144 VIGIQLFTEANIDLGPVPGSTIKESVKSSDGFHSFLSTLHPLPAGDRNVTRGVCGILQLS 203
+IGIQ F E +IDLGPV GS+ KE KS DG +S L+ AG+RNV+RG+CG+ QLS
Sbjct: 150 IIGIQFFIETDIDLGPVLGSSTKE--KSIDGIYSALA------AGERNVSRGMCGLFQLS 201
Query: 204 EEVLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRMVCQNAWGSETTRVLETVPGAK 263
+EV+ +KIL+RLTPRD+AS+ SV RRLY LTKNEDLWR VCQNAWGSETTRVLETVPGAK
Sbjct: 202 DEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRVLETVPGAK 261
Query: 264 RLGWGXXXXXXXXXXXXXWRKLTVGGGVEPSRCNFSACAVGNRVVLFG 311
RLGWG WRKL+VGG VEPSRCNFSACAVGNRVVLFG
Sbjct: 262 RLGWGRLARELTTLEAAAWRKLSVGGSVEPSRCNFSACAVGNRVVLFG 309
>AT2G18915.2 | Symbols: LKP2, ADO2 | LOV KELCH protein 2 |
chr2:8194792-8197255 REVERSE LENGTH=611
Length = 611
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/288 (66%), Positives = 229/288 (79%), Gaps = 10/288 (3%)
Query: 27 GPIPFPVLQ---TAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRG 83
G IPFPV TAPCGFVV+DALE D+PIIYVN VFE++TGYRAEEV+GRNCRFLQCRG
Sbjct: 30 GAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNTVFEIVTGYRAEEVIGRNCRFLQCRG 89
Query: 84 PFAKRRHPLVDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIH 143
PF KRRHP+VDST+V+++R+CLE G+EFQGELLNFRKDG+PLMN+LRL PI ++DEI H
Sbjct: 90 PFTKRRHPMVDSTIVAKMRQCLENGIEFQGELLNFRKDGSPLMNKLRLVPIR-EEDEITH 148
Query: 144 VIGIQLFTEANIDLGPVPGSTIKESVKSSDGFHSFLSTLHPLPAGDRNVTRGVCGILQLS 203
IG+ LFT+A IDLGP P + KE + S F S LP G+RNV+RG+CGI +LS
Sbjct: 149 FIGVLLFTDAKIDLGPSPDLSAKEIPRISRSFTS------ALPIGERNVSRGLCGIFELS 202
Query: 204 EEVLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRMVCQNAWGSETTRVLETVPGAK 263
+EV+ +KIL++LTP DIAS+G V RRL ELTKN+D+WRMVCQN WG+E TRVLE+VPGAK
Sbjct: 203 DEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQNTWGTEATRVLESVPGAK 262
Query: 264 RLGWGXXXXXXXXXXXXXWRKLTVGGGVEPSRCNFSACAVGNRVVLFG 311
R+GW WRK +VGG VEPSRCNFSACAVGNR+V+FG
Sbjct: 263 RIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGNRIVIFG 310
>AT2G18915.1 | Symbols: LKP2, ADO2 | LOV KELCH protein 2 |
chr2:8194792-8197255 REVERSE LENGTH=601
Length = 601
Score = 357 bits (916), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 181/288 (62%), Positives = 219/288 (76%), Gaps = 20/288 (6%)
Query: 27 GPIPFPVLQ---TAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRG 83
G IPFPV TAPCGFVV+DALE D+PIIYVN VFE++TGYRAEEV+G
Sbjct: 30 GAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNTVFEIVTGYRAEEVIG---------- 79
Query: 84 PFAKRRHPLVDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIH 143
PF KRRHP+VDST+V+++R+CLE G+EFQGELLNFRKDG+PLMN+LRL PI ++DEI H
Sbjct: 80 PFTKRRHPMVDSTIVAKMRQCLENGIEFQGELLNFRKDGSPLMNKLRLVPIR-EEDEITH 138
Query: 144 VIGIQLFTEANIDLGPVPGSTIKESVKSSDGFHSFLSTLHPLPAGDRNVTRGVCGILQLS 203
IG+ LFT+A IDLGP P + KE + S F S LP G+RNV+RG+CGI +LS
Sbjct: 139 FIGVLLFTDAKIDLGPSPDLSAKEIPRISRSFTS------ALPIGERNVSRGLCGIFELS 192
Query: 204 EEVLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRMVCQNAWGSETTRVLETVPGAK 263
+EV+ +KIL++LTP DIAS+G V RRL ELTKN+D+WRMVCQN WG+E TRVLE+VPGAK
Sbjct: 193 DEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQNTWGTEATRVLESVPGAK 252
Query: 264 RLGWGXXXXXXXXXXXXXWRKLTVGGGVEPSRCNFSACAVGNRVVLFG 311
R+GW WRK +VGG VEPSRCNFSACAVGNR+V+FG
Sbjct: 253 RIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGNRIVIFG 300
>AT1G68050.1 | Symbols: ADO3, FKF1 | flavin-binding, kelch repeat, f
box 1 | chr1:25508737-25510697 FORWARD LENGTH=619
Length = 619
Score = 317 bits (812), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/286 (59%), Positives = 195/286 (68%), Gaps = 8/286 (2%)
Query: 26 VGPIPFPVLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPF 85
VG +P+ P F+V+DALE D P+IYVN VFE+ TGYRA+EVLGRNCRFLQ R P
Sbjct: 44 VGMFYYPM---TPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRFLQYRDPR 100
Query: 86 AKRRHPLVDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVI 145
A+RRHPLVD VVSEIRRCLEEG+EFQGELLNFRKDGTPL+NRLRL PI DD I HVI
Sbjct: 101 AQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIRDDDGTITHVI 160
Query: 146 GIQLFTEANIDLGPVPGSTIKESVKSSDGFHSFLSTLHPLPAGDRNVTRGVCGILQLSEE 205
GIQ+F+E IDL V K + + P + CGILQLS+E
Sbjct: 161 GIQVFSETTIDLDRVSYPVFKHKQQLDQTSECLFPSGSPR---FKEHHEDFCGILQLSDE 217
Query: 206 VLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRMVCQNAWGSETTRVLETVPGAKRL 265
VL IL+RLTPRD+ASIGS RRL +LTKNE + +MVCQNAWG E T LE + K+L
Sbjct: 218 VLAHNILSRLTPRDVASIGSACRRLRQLTKNESVRKMVCQNAWGKEITGTLEIM--TKKL 275
Query: 266 GWGXXXXXXXXXXXXXWRKLTVGGGVEPSRCNFSACAVGNRVVLFG 311
WG WRK TVGG V+PSRCNFSACAVGNR+VLFG
Sbjct: 276 RWGRLARELTTLEAVCWRKFTVGGIVQPSRCNFSACAVGNRLVLFG 321
>AT5G58140.3 | Symbols: PHOT2, NPL1 | phototropin 2 |
chr5:23524771-23529947 FORWARD LENGTH=898
Length = 898
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L T FVV+DA + PI+Y ++ F +TGY ++E++GRNCRFLQ P
Sbjct: 127 ALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQG---------PD 177
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
D V++IR C++ G + G LLN++KDGTP N L +TPI D I IG+Q+
Sbjct: 178 TDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 35/234 (14%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ FV++D D+PII+ + F LT Y EE+LGRNCRFLQ P
Sbjct: 383 TLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG---------PE 433
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQLFTE 152
D V +IR + + E +L+N+ K G N L P+ E+ + IG+QL
Sbjct: 434 TDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGS 493
Query: 153 ANID----------------LGPVPGSTIKESVKS--------SDGFHSFLSTLHPLPAG 188
+++ L + + E+V+ D + + ++PLP
Sbjct: 494 DHVEPLQNRLSERTEMQSSKLVKATATNVDEAVRELPDANTRPEDLWAAHSKPVYPLPHN 553
Query: 189 DRNVTRGVCGILQLSEEVLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRM 242
+ + +Q S E + L + P GSV L EL +L+ M
Sbjct: 554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGSV--HLVELKGTGELYAM 605
>AT5G58140.1 | Symbols: PHOT2, NPL1 | phototropin 2 |
chr5:23524771-23529993 FORWARD LENGTH=915
Length = 915
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L T FVV+DA + PI+Y ++ F +TGY ++E++GRNCRFLQ P
Sbjct: 127 ALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQG---------PD 177
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
D V++IR C++ G + G LLN++KDGTP N L +TPI D I IG+Q+
Sbjct: 178 TDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 35/234 (14%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ FV++D D+PII+ + F LT Y EE+LGRNCRFLQ P
Sbjct: 383 TLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG---------PE 433
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQLFTE 152
D V +IR + + E +L+N+ K G N L P+ E+ + IG+QL
Sbjct: 434 TDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGS 493
Query: 153 ANID----------------LGPVPGSTIKESVKS--------SDGFHSFLSTLHPLPAG 188
+++ L + + E+V+ D + + ++PLP
Sbjct: 494 DHVEPLQNRLSERTEMQSSKLVKATATNVDEAVRELPDANTRPEDLWAAHSKPVYPLPHN 553
Query: 189 DRNVTRGVCGILQLSEEVLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRM 242
+ + +Q S E + L + P GSV L EL +L+ M
Sbjct: 554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGSV--HLVELKGTGELYAM 605
>AT5G58140.2 | Symbols: PHOT2, NPL1 | phototropin 2 |
chr5:23524771-23529993 FORWARD LENGTH=915
Length = 915
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L T FVV+DA + PI+Y ++ F +TGY ++E++GRNCRFLQ P
Sbjct: 127 ALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQG---------PD 177
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
D V++IR C++ G + G LLN++KDGTP N L +TPI D I IG+Q+
Sbjct: 178 TDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 35/234 (14%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ FV++D D+PII+ + F LT Y EE+LGRNCRFLQ P
Sbjct: 383 TLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG---------PE 433
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQLFTE 152
D V +IR + + E +L+N+ K G N L P+ E+ + IG+QL
Sbjct: 434 TDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGS 493
Query: 153 ANID----------------LGPVPGSTIKESVKS--------SDGFHSFLSTLHPLPAG 188
+++ L + + E+V+ D + + ++PLP
Sbjct: 494 DHVEPLQNRLSERTEMQSSKLVKATATNVDEAVRELPDANTRPEDLWAAHSKPVYPLPHN 553
Query: 189 DRNVTRGVCGILQLSEEVLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRM 242
+ + +Q S E + L + P GSV L EL +L+ M
Sbjct: 554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGSV--HLVELKGTGELYAM 605
>AT5G58140.4 | Symbols: PHOT2, NPL1 | phototropin 2 |
chr5:23524771-23528541 FORWARD LENGTH=689
Length = 689
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L T FVV+DA + PI+Y ++ F +TGY ++E++GRNCRFLQ P
Sbjct: 127 ALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQG---------PD 177
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
D V++IR C++ G + G LLN++KDGTP N L +TPI D I IG+Q+
Sbjct: 178 TDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQV 234
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 35/234 (14%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ FV++D D+PII+ + F LT Y EE+LGRNCRFLQ P
Sbjct: 383 TLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG---------PE 433
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQLFTE 152
D V +IR + + E +L+N+ K G N L P+ E+ + IG+QL
Sbjct: 434 TDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGS 493
Query: 153 ANID----------------LGPVPGSTIKESVKS--------SDGFHSFLSTLHPLPAG 188
+++ L + + E+V+ D + + ++PLP
Sbjct: 494 DHVEPLQNRLSERTEMQSSKLVKATATNVDEAVRELPDANTRPEDLWAAHSKPVYPLPHN 553
Query: 189 DRNVTRGVCGILQLSEEVLCLKILARLTPRDIASIGSVSRRLYELTKNEDLWRM 242
+ + +Q S E + L + P GSV L EL +L+ M
Sbjct: 554 KESTSWKAIKKIQASGETVGLHHFKPIKPLGSGDTGSV--HLVELKGTGELYAM 605
>AT3G45780.2 | Symbols: PHOT1, NPH1, JK224, RPT1 | phototropin 1 |
chr3:16818557-16823960 FORWARD LENGTH=996
Length = 996
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L T FVV+DA + D+PI+Y +A F +TGY ++EV+GRNCRFLQ G
Sbjct: 191 ALSTFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG--------- 241
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
D+ +++IR L G + G +LN++KDGT N L + PI + +++ IG+Q+
Sbjct: 242 TDADELAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQV 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ FV+TD D+PII+ + F LT Y EE+LGRNCRFLQ P
Sbjct: 469 TLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG---------PE 519
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
D T V +IR ++ E +L+N+ K G N L P+ E+ + IG+QL
Sbjct: 520 TDLTTVKKIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQL 576
>AT3G45780.1 | Symbols: PHOT1, NPH1, JK224, RPT1 | phototropin 1 |
chr3:16818557-16823960 FORWARD LENGTH=996
Length = 996
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L T FVV+DA + D+PI+Y +A F +TGY ++EV+GRNCRFLQ G
Sbjct: 191 ALSTFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG--------- 241
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
D+ +++IR L G + G +LN++KDGT N L + PI + +++ IG+Q+
Sbjct: 242 TDADELAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQV 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ FV+TD D+PII+ + F LT Y EE+LGRNCRFLQ P
Sbjct: 469 TLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQG---------PE 519
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
D T V +IR ++ E +L+N+ K G N L P+ E+ + IG+QL
Sbjct: 520 TDLTTVKKIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQL 576
>AT2G02710.2 | Symbols: PLP, PLPA | PAS/LOV protein B |
chr2:758812-760608 REVERSE LENGTH=397
Length = 397
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 40 GFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVS 99
FV+T+ D PIIY + F LTGY+ +EVLG+NCRFL DS+V+
Sbjct: 260 SFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVD---------TDSSVLY 310
Query: 100 EIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
E++ C+ +G ++LN+RKD + N L ++P+ + + +G+Q+
Sbjct: 311 EMKECILKGQSCTVQILNYRKDKSSFWNLLHISPVRNASGKTAYFVGVQV 360
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ P F +TD HPI++ + F +TGY EEV+GRN + Q GP RR
Sbjct: 31 ALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKVFQ--GPKTNRRS-- 86
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDD-EIIHVIGIQL 149
+ EIR + E Q LLN+RK G+P + P++G DD ++ + + +Q+
Sbjct: 87 -----IMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVAVQV 139
>AT2G02710.1 | Symbols: PLP, PLPB | PAS/LOV protein B |
chr2:758812-760608 REVERSE LENGTH=399
Length = 399
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ P F +TD HPI++ + F +TGY EEV+GRN + Q GP RR
Sbjct: 31 ALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKVFQ--GPKTNRRS-- 86
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDD-EIIHVIGIQL 149
+ EIR + E Q LLN+RK G+P + P++G DD ++ + + +Q+
Sbjct: 87 -----IMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVAVQV 139
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 40 GFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVS 99
FV+T+ D PIIY + F LTGY+ +EVLG+NCRFL DS+V+
Sbjct: 260 SFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVD---------TDSSVLY 310
Query: 100 EIRRCLEEGVEFQGELLNF--RKDGTPLMNRLRLTPIYGDDDEIIHVIGIQL 149
E++ C+ +G ++LN+ RKD + N L ++P+ + + +G+Q+
Sbjct: 311 EMKECILKGQSCTVQILNYSNRKDKSSFWNLLHISPVRNASGKTAYFVGVQV 362
>AT2G02710.3 | Symbols: PLP, PLPC | PAS/LOV protein B |
chr2:758925-760608 REVERSE LENGTH=358
Length = 358
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 33 VLQTAPCGFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPL 92
L+ P F +TD HPI++ + F +TGY EEV+GRN + Q GP RR
Sbjct: 31 ALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKVFQ--GPKTNRRS-- 86
Query: 93 VDSTVVSEIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPIYGDDD-EIIHVIGIQL 149
+ EIR + E Q LLN+RK G+P + P++G DD ++ + + +Q+
Sbjct: 87 -----IMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVAVQV 139
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 40 GFVVTDALEHDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVS 99
FV+T+ D PIIY + F LTGY+ +EVLG+NCRFL DS+V+
Sbjct: 260 SFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVD---------TDSSVLY 310
Query: 100 EIRRCLEEGVEFQGELLNFRKDGTPLMNRLRLTPI 134
E++ C+ +G ++LN+RKD + N L ++P+
Sbjct: 311 EMKECILKGQSCTVQILNYRKDKSSFWNLLHISPV 345