| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7MC35_SOYBN | 728 | 72.0 | 81.0 | (tr|K7MC35) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT2G06040.1 | 520 | 52.6 | 69.8 | | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins in 240 species: Archae - 0; Bacteria - 125; Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). | chr2:2352333-2355419 REVERSE LENGTH=762 |
| Medicago | Medtr2g041610.1 | 735 | 56.5 | 67.4 | | Rad7, putative | HC | chr2:18268218-18274145 | 20130731 |
| Soybean | Glyma17g05740.1 | 616 | 61.4 | 73.3 | |
| LJGI | gnl|LJGI|FS343876 | 682 | 95.5 | 95.5 | similar to UniRef100_Q9LJG1 Cluster: Similarity to terminal ear1; n=2; Arabidopsis thaliana|Rep: Similarity to terminal ear1 - Arabidopsis thaliana (Mouse-ear cress), partial (3%) |
| Lj6g3v1187500.1 | length: 728 aa. | |||
| IPR006553 | Leucine-rich repeat, cysteine-containing subtype | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00367 | Leucine-rich | 2.4e+02 | 431-456 457-482 537-562 563-588 589-613 615-640 641-666 667-688 |
| no_ID | ||||
| Gene3D | G3DSA:3.80.10.10 | no description | 1e-31 | 485-688 |
| HMMPanther | PTHR23125 | F-BOX/LEUCINE | 1.3e-147 | 163-701 |
| HMMPanther | PTHR23125:SF2 | GB | 1.3e-147 | 163-701 |
| Seg | seg | seg | NA | 16-37 89-103 137-145 165-182 188-201 204-218 241-248 253-261 460-475 |
| superfamily | SSF52047 | RNI-like | 6.4e-35 | 379-704 |
Lj6g3v1187500.1 nucl 7, chlo 2, cysk 2, cyto 1, mito 1, plas 1, mito_plas 1, cyto_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v1187500.1 | Not targeted | -37.606 | -1.087 | -4.419 | 47.77% | -32.100 |