Miyakogusa Predicted Gene

Lj6g3v0727750.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N087_SOYBN 487 85.4 90.1 (tr|I1N087) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G26600.1 427 84.1 94.0 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:13419629-13423418 FORWARD LENGTH=671
Medicago Medtr3g460700.1 477 83.7 89.1 | NOL1/NOP2/sun family RNA methylase, putative | HC | chr3:23817126-23809675 | 20130731
Soybean Glyma18g08310.1 485 85.0 89.8  
LJGI gnl|LJGI|TC66916 188 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0727750.2 length: 276 aa.
IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
method AccNumber shortName E-value location
HMMPfam PF01189 Nol1_Nop2_Fmu 2.2e-76 2-226
IPR011023 Nop2p
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006364 rRNA processing    
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity    
HMMTigr TIGR00446 nop2p: 1.4e-86 2-227
IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0008168 methyltransferase activity    
PatternScan PS01153 NOL1_NOP2_SUN NA 95-106
IPR023267 RNA (C5-cytosine) methyltransferase
FPrintScan PR02008 RCMTFAMILY 5.7e-26 28-38
96-108
150-166
210-227
no_ID  
Gene3D G3DSA:3.40.50.150 no description 2.9e-61 10-227
HMMPanther PTHR22807 NOP2(YEAST)-RELATED 3.1e-182 1-272
HMMPanther PTHR22807:SF11 NUCLEOLAR 3.1e-182 1-272
Seg seg seg NA 242-254
superfamily SSF53335 S-adenosyl-L-methionine-dependent 4.5e-59 3-228
Wolf-PSORT
Lj6g3v0727750.2	extr 7, chlo 3, cyto 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0727750.2