Miyakogusa Predicted Gene

Lj5g3v2045180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LVC4_SOYBN 1251 75.6 85.5 (tr|I1LVC4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G16390.1 885 57.6 71.9 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing protein / helicase domain-containing protein | chr2:7097638-7101182 FORWARD LENGTH=888
Medicago Medtr8g037345.1 1194 72.6 80.6 | chromatin remodeling complex subunit | HC | chr8:13958611-13951546 | 20130731
Soybean Glyma12g36460.1 1251 75.6 85.5  
LJGI gnl|LJGI|TC78397 1061 97.5 97.5 similar to UniRef100_A7P7U3 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2045180.1 length: 792 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 5.3e-26 265-469
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 2.5e-07 643-716
HMMSmart SM00490 helicase 6.9e-11 631-716
ProfileScan PS51194 HELICASE_CTER 10.723 584-768
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 9.1e-12 257-471
ProfileScan PS51192 HELICASE_ATP_BIND_1 13.646 275-454
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.7e-37 395-752
250-473
no_ID  
Gene3D G3DSA:3.40.50.300 no description 9e-09 267-448
594-731
HMMPanther PTHR10799 SWI/SNF-RELATED 6.4e-249 39-771
HMMPanther PTHR10799:SF41 ATP 6.4e-249 39-771
Seg seg seg NA 138-151
170-179
645-656
Wolf-PSORT
Lj5g3v2045180.1	cyto 6, nucl 5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2045180.1