Miyakogusa Predicted Gene
- Lj5g3v2045180.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2045180.1 Non Chatacterized Hit- tr|I1LVC4|I1LVC4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26386
PE,79.07,0,SNF2_N,SNF2-related; Helicase_C,Helicase, C-terminal;
seg,NULL; DEAD-like helicases superfamily,Heli,CUFF.56512.1
(792 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 885 0.0
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 712 0.0
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 286 3e-77
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 283 3e-76
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 278 8e-75
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 268 1e-71
AT3G32330.1 | Symbols: | DNA repair protein-related | chr3:1327... 226 7e-59
AT3G32280.1 | Symbols: | ATP-dependent helicase family protein ... 187 3e-47
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 155 1e-37
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 155 1e-37
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 155 1e-37
AT3G31900.1 | Symbols: | ATP-dependent helicase family protein ... 147 3e-35
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 136 5e-32
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 124 3e-28
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 122 1e-27
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 116 7e-26
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 108 1e-23
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 105 1e-22
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 104 2e-22
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 100 3e-21
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 100 3e-21
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 92 2e-18
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 92 2e-18
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 90 6e-18
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 84 3e-16
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 84 3e-16
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 84 3e-16
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 83 6e-16
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 83 8e-16
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 82 2e-15
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 82 2e-15
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 82 2e-15
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 80 4e-15
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 76 1e-13
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 73 9e-13
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 73 1e-12
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 73 1e-12
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 70 7e-12
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 69 2e-11
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 64 5e-10
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 63 6e-10
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 63 7e-10
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 62 1e-09
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 62 1e-09
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 62 1e-09
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 62 1e-09
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 60 5e-09
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 59 1e-08
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 59 1e-08
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 59 2e-08
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 55 2e-07
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 53 9e-07
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/766 (57%), Positives = 551/766 (71%), Gaps = 39/766 (5%)
Query: 59 SAQAVVIIDSDEEDDRDKNSSLPFNEVMFPNSLQSPALRMM-------------GYRAPI 105
S+ +V++DSD+ED+ + F + + + + G P
Sbjct: 130 SSSEIVLLDSDDEDNERQRPMYQFQSTLVQHQKNQGDVTPLIPQCSFEEVDLGRGKEMPS 189
Query: 106 A----YHGESEDLKFEPTRAAKDKTQRDKGVYVGVQXXXXXXXXXXXXX---XIWREMSM 158
A G++ K P ++ +KGVYVGV+ IW EM++
Sbjct: 190 AIKAIVEGQTSRGKVLPI---ENGVVNEKGVYVGVEEDDSDNESEAADEDLGNIWNEMAL 246
Query: 159 AVECSKDASVNXXXXXXXXXXDDCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQY-KVK 217
++ECSKD + +DC+HSF+LKDD+GYVCRVCGVI++ I I + Q+ K K
Sbjct: 247 SIECSKDVARETSHKEKADVVEDCEHSFILKDDMGYVCRVCGVIEKSILEIIDVQFTKAK 306
Query: 218 RSTRTYMADSWNAKAKVDVYGVNIAEDDIMFTEISAHPRHMKQMKSHKIEGFNFLVRNLV 277
R+TRTY +++ + + +E+ +M ++AHP H +MK H+IEGF FL NLV
Sbjct: 307 RNTRTYASETRTKRFGESDNELKFSEEGLMIGGLAAHPTHAAEMKPHQIEGFQFLCSNLV 366
Query: 278 GDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVED 337
D+PGGCI+AHAPGSGKTFMIISFMQSFL KYP A+PLVVLPKGIL TWKKEF WQVED
Sbjct: 367 ADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLPKGILPTWKKEFVRWQVED 426
Query: 338 IPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLK 397
IPL DFY+ KA++R+QQL +LKQW+E KSILFLGY+QFS+IVCD++T+ S+SCQ+ILLK
Sbjct: 427 IPLLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQFSTIVCDDTTD--SLSCQEILLK 484
Query: 398 VPSILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLR 457
VPSILILDEGH PRNE+T+++QSLA+V+TPRKVVLSGTLYQNHVKEVFNILNLVRPKFL+
Sbjct: 485 VPSILILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLK 544
Query: 458 METSRPIVKRIHS------RVHISGKKS-----FYDLVEDTLQKDPDFKRKIAVVQDLRE 506
++TS+ VKRI + R ++G S F + VE TLQK DF KI V+QDLRE
Sbjct: 545 LDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETVEHTLQKSEDFTVKIKVIQDLRE 604
Query: 507 MTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFKVSSMGSALYLHP 566
MT KVLHYYKGDFLDELPGL DFTV+L L+P+Q +E KL+ RKFKVS++GSA+YLHP
Sbjct: 605 MTKKVLHYYKGDFLDELPGLADFTVVLNLSPKQLNEVKKLRREKRKFKVSAVGSAIYLHP 664
Query: 567 RLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLCESSNEKLLVFSQYLLP 626
+L +DK + VSD +D+++EKLD+ +GVK+KFF+N++NLC+S+ EKLLVFSQYL+P
Sbjct: 665 KLKVFSDKS--DDVSDTTMDEMVEKLDLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIP 722
Query: 627 LKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAKIFFGSIKACGEGIS 686
LK+LERL KGW GK QREWSM FN+SPDAKIFFGSIKACGEGIS
Sbjct: 723 LKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAKIFFGSIKACGEGIS 782
Query: 687 LVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEEDDHITCFKKELI 746
LVGASR+LILDV LNPSVTRQAIGRAFRPGQ K V YRLIA SPEE+DH TCFKKE+I
Sbjct: 783 LVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGSSPEEEDHNTCFKKEVI 842
Query: 747 SKMWFEWNEYCGDRAFQVETVSVNECGDEFLETPMLGEDVKALYKR 792
SKMWFEWNEYCG + F+VET+ V+E GD FLE+P L ED++ LYKR
Sbjct: 843 SKMWFEWNEYCGYQNFEVETIDVDEAGDTFLESPALREDIRVLYKR 888
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/661 (52%), Positives = 466/661 (70%), Gaps = 22/661 (3%)
Query: 152 IWREMSMAVECSKDASVNXXXXXXXXXXDDCDHSFVLKDDLGYVCRVCGVIDRGIETIFE 211
+WR+M+ A E K +V +DCDHSF+ KDD+G VCRVCG+I + IE++ E
Sbjct: 156 LWRKMAFAQESIK-VTVEDSQSNDHKQIEDCDHSFICKDDIGEVCRVCGLIKKPIESMIE 214
Query: 212 FQY-KVKRSTRTYMADSWNAKAKVDVYGVNIAEDDIMFTEISAHPRHMKQMKSHKIEGFN 270
+ K KRS RTYM + N + D G+ + +I+ ++ HP H ++M+ H+ EGF
Sbjct: 215 VVFNKQKRSRRTYMREKENGETSRDFSGIQSSHTNILGEKMFIHPWHDQEMRPHQTEGFR 274
Query: 271 FLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEF 330
FL NL D PGGCILAHAPGSGKTF++ISF+QSF+ P ARPLVVLPKGI+ +WK+EF
Sbjct: 275 FLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQARPLVVLPKGIIESWKREF 334
Query: 331 QTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISIS 390
W+VE IPL DFY+VKA+SR QQL+VL QW++ +SILFLGY+QF+ I+CD++ + S
Sbjct: 335 TLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRIICDDNFEAASED 394
Query: 391 CQDILLKVPSILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNL 450
C+ ILL+ P++LILDEGH RN+ T M+ SLA+VKT RKVVL+GTL+QN+V+EVFNIL+L
Sbjct: 395 CKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRKVVLTGTLFQNNVEEVFNILDL 454
Query: 451 VRPKFLRMETSRPIVKRIHSRVHI-SGKK----------SFYDLVEDTLQKDPDFKRKIA 499
VRPKFL+ +R IV RI S+ I GK+ +F+ VE TLQ+ +F K +
Sbjct: 455 VRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVELTLQRSTNFSAKAS 514
Query: 500 VVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFKVSSMG 559
+++DLREMT +LHY+K DF LPGL +FTV+L L+ Q+ E L+ + FK S+G
Sbjct: 515 LIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLSSIQRDEVKGLRKMEL-FKQISLG 573
Query: 560 SALYLHPRLIPVADK---CGENSVSDQ-----MVDDLIEKLDVKDGVKSKFFMNILNLCE 611
+ALY+HP+L ++ GE SD +D +++K++V+DGVK KFF+N+L LCE
Sbjct: 574 AALYIHPKLKSFLEENPSNGEKGFSDNNTTVMKLDKMLKKINVRDGVKMKFFLNLLALCE 633
Query: 612 SSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDA 671
S+ EKLLVFSQY++P+K LERL+ KGW GK QREWSM +FNNS +A
Sbjct: 634 STGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEA 693
Query: 672 KIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADS 731
K+FFGSIKACGEGISLVGASRVLILDVHLNPSVT+QA+ RA+RPGQ +KV+ Y+L+AADS
Sbjct: 694 KVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADS 753
Query: 732 PEEDDHITCFKKELISKMWFEWNEYCGDRAFQVETVSVNECGDEFLETPMLGEDVKALYK 791
PEE+++ TC +KE++SKMWFEWN G F + + GD FLET + ED+K LY
Sbjct: 754 PEEENYETCTRKEMMSKMWFEWNVGSGREDFGFRAIDADHSGDAFLETTKMKEDIKCLYT 813
Query: 792 R 792
+
Sbjct: 814 K 814
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 199/669 (29%), Positives = 326/669 (48%), Gaps = 75/669 (11%)
Query: 152 IWREMSMAVECS---KDASVNXXXXXXXXXXDDCDHSFVLKDDLGYVCRVCGVIDRGIET 208
+WREM + + S D V DC+H + L +++G CR+CG + I+
Sbjct: 548 LWREMELCLASSYILDDHEVRVDNEAFHKATCDCEHDYELNEEIGMCCRLCGHVGTEIKH 607
Query: 209 I---FEFQYKVKRSTRTYMADSWNAK------AKVDVYGVNIAEDDIMFTEISAH----- 254
+ F K T+ D N + + + +A D+ E S +
Sbjct: 608 VSAPFARHKKWTTETKQINEDDINTTIVNQDGVESHTFTIPVASSDMPSAEESDNVWSLI 667
Query: 255 PRHMKQMKSHKIEGFNFLVRNLVG-----------DNPGGCILAHAPGSGKTFMIISFMQ 303
P+ +++ H+ + F FL +NL G D GGC+++H PG+GKTF+II+F+
Sbjct: 668 PQLKRKLHLHQKKAFEFLWKNLAGSVVPAMMDPSSDKIGGCVVSHTPGAGKTFLIIAFLA 727
Query: 304 SFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQ--------- 354
S+L +P RPLV+ PK L TW KEF W++ +P++ + + S++
Sbjct: 728 SYLKIFPGKRPLVLAPKTTLYTWYKEFIKWEIP-VPVHLLHGRRTYCMSKEKTIQFEGIP 786
Query: 355 ------------LEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLKVPSIL 402
L+ +++W S+L +GY F +++ ++S + +L + P +L
Sbjct: 787 KPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDSKFAHRKYMAKVLRESPGLL 846
Query: 403 ILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL------ 456
+LDEGHNPR+ + + ++L KV T +++LSGTL+QN+ E FN L L RPKF+
Sbjct: 847 VLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEYFNTLCLARPKFVHEVLVE 906
Query: 457 ---RMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKRKIAVVQDLREMTSKVLH 513
+ +T++ K H + +K F D++ + +R + + LR MTS +
Sbjct: 907 LDKKFQTNQAEQKAPH-LLENRARKFFLDIIAKKIDTKVGDER-LQGLNMLRNMTSGFID 964
Query: 514 YYKGDFL---DELPGLVDFTVLLKLTPRQKHETGKLKNISRKF-----KVSSMGSALYLH 565
Y+G D LPGL +T+L+ T Q KL+NI + ++ + + +H
Sbjct: 965 NYEGSGSGSGDVLPGLQIYTLLMNSTDVQHKSLTKLQNIMSTYHGYPLELELLITLAAIH 1024
Query: 566 PRLIPVADKCGENSVSDQMVDDLIEKL--DVKDGVKSKFFMNILNLCESSNEKLLVFSQY 623
P L+ C + ++++ IEKL D K G K F +N++ EK+L+F
Sbjct: 1025 PWLVKTTTCCAKFFNPQELLE--IEKLKHDAKKGSKVMFVLNLV-FRVVKREKILIFCHN 1081
Query: 624 LLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNN-SPDAKIFFGSIKACG 682
+ P++ L W G+ +R ++KF +++ SI AC
Sbjct: 1082 IAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACA 1141
Query: 683 EGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEEDDHITCFK 742
EGISL ASRV++LD NPS T+QAI RAFRPGQ K V+VY+L++ + EED +
Sbjct: 1142 EGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTW 1201
Query: 743 KELISKMWF 751
KE +S M F
Sbjct: 1202 KEWVSSMIF 1210
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 208/676 (30%), Positives = 336/676 (49%), Gaps = 99/676 (14%)
Query: 184 HSFVLKDDLGYVCRVCGVIDRGIET--IFEFQYKVKRSTRTY------MADSWNAKAKVD 235
H + ++G C CG ++R I + + E+ K R R + S+ K D
Sbjct: 736 HDLCIDLEVGLKCMHCGFVEREIRSMDVSEWGEKTTRERRKFDRFEEEEGSSFIGKLGFD 795
Query: 236 VYGVNIAEDDIMF--TEISAHPRHMKQMKSHKIEGFNFLVRNLVG-------------DN 280
++ E + T P QM H+ EGF F+ +NL G D
Sbjct: 796 APNNSLNEGCVSSEGTVWDKIPGVKSQMYPHQQEGFEFIWKNLAGTIMLNELKDFENSDE 855
Query: 281 PGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPL 340
GGCI++HAPG+GKT + I F+Q++L +P+ +P+++ P +L TW +EF+ W + IP
Sbjct: 856 TGGCIMSHAPGTGKTRLTIIFLQAYLQCFPDCKPVIIAPASLLLTWAEEFKKWNI-SIPF 914
Query: 341 YDF----YTVKADSRSQQLEVLKQ----------------WVECKSILFLGYKQFSSIVC 380
++ +T K +S + L + K W++ KSIL + Y + +
Sbjct: 915 HNLSSLDFTGKENSAALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAG 974
Query: 381 ----DNSTNSISI--------SCQDILLKVPSILILDEGHNPRNENTDMVQSLAKVKTPR 428
D T + ++IL+ P +L+LDE H PRN+ + + ++L+KV+T +
Sbjct: 975 VKDEDKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQK 1034
Query: 429 KVVLSGTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTL 488
+++LSGT +QN+ E+ N+L L RPK+L TS +K+ V GKK+ + + +
Sbjct: 1035 RILLSGTPFQNNFLELCNVLGLARPKYLERLTS--TLKKSGMTVTKRGKKNLGNEINNR- 1091
Query: 489 QKDPDFKRKIAVVQDLREMTSKVLHYYKGDFL-DELPGLVDFTVLLKLTPRQKH------ 541
+++L+ + +H +KG L LPGL + V+L Q+
Sbjct: 1092 -----------GIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIE 1140
Query: 542 --ETGKLKNISRKFKVSSMGSALYLHPRLIPVADKCGEN---SVSDQMVDDLIE-KLDVK 595
K KN+ F+ S + +HP L+ K E S+ + ++ L + +LD
Sbjct: 1141 VTHNRKTKNV---FETEHKLSLVSVHPSLVSRC-KISEKERLSIDEALLAQLKKVRLDPN 1196
Query: 596 DGVKSKFFMNILNLCESSNEKLLVFSQYLLPLKY-LERLVMKWKGWSFGKXXXXXXXXXX 654
VK++F M + LCE EK+LVFSQY+ PLK ++ LV ++K W+ G+
Sbjct: 1197 QSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFK-WNPGEEVLYMHGKLE 1255
Query: 655 XXQREWSMNKFNNSPD-AKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAF 713
QR+ +N+FN+ AK+F S KAC EGISLVGASRV++LDV NP+V RQAI RA+
Sbjct: 1256 QKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAY 1315
Query: 714 RPGQTKKVFVYRLIAADSPEEDDHITCFKKELISKMWFEWNEYCGDRAFQ-----VETVS 768
R GQ + V+ Y L+A +PE + +K+ IS++ F C R + E V+
Sbjct: 1316 RIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF----ACSSRHDKGKEKIAEAVT 1371
Query: 769 VNECGDEFLETPMLGE 784
++ D +E LG+
Sbjct: 1372 EDKVLDTMVEHSKLGD 1387
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 278 bits (712), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 205/708 (28%), Positives = 345/708 (48%), Gaps = 80/708 (11%)
Query: 152 IWREMSMAVECS---KDASVNXXXXXXXXXXDDCDHSFVLKDDLGYVCRVCGVIDRGIET 208
+WREM + + S D V C+H + L++++G CR+CG + I+
Sbjct: 554 LWREMELCLASSYILDDNEVRVDNEAFEKARSGCEHDYRLEEEIGMCCRLCGHVGSEIKD 613
Query: 209 I---FEFQYKVKRSTRTYMADSWNAK-----AKVDVYGVNIAEDDIMFTEISAH-----P 255
+ F K T+ D K A+ + + +++ E S + P
Sbjct: 614 VSAPFAEHKKWTIETKHIEEDDIKTKLSHKEAQTKDFSMISDSSEMLAAEESDNVWALIP 673
Query: 256 RHMKQMKSHKIEGFNFLVRNLVGD-----------NPGGCILAHAPGSGKTFMIISFMQS 304
+ +++ H+ F FL RN+ G N GGC+++H+PG+GKTF+II+F+ S
Sbjct: 674 KLKRKLHVHQRRAFEFLWRNVAGSVEPSLMDPTSGNIGGCVISHSPGAGKTFLIIAFLTS 733
Query: 305 FLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLY-----------------DFYTVK 347
+L +P RPLV+ PK L TW KEF W++ +P++ F V
Sbjct: 734 YLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIP-VPVHLIHGRRTYCTFKQNKTVQFNGVP 792
Query: 348 ADSRSQQ-----LEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLKVPSIL 402
SR LE +++W S+L +GY F++++ ++S + +L + P +L
Sbjct: 793 KPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTLMREDSKFAHRKYMAKVLRESPGLL 852
Query: 403 ILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL------ 456
+LDEGHNPR+ + + ++L KV T +++LSGTL+QN+ E FN L L RPKF+
Sbjct: 853 VLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQNNFCEYFNTLCLARPKFIHEVLME 912
Query: 457 ---RMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKRKIAVVQDLREMTSKVLH 513
+ +T+ + K H + +K F D++ + +R + + L+ MT+ +
Sbjct: 913 LDQKFKTNHGVNKAPH-LLENRARKLFLDIIAKKIDASVGDER-LQGLNMLKNMTNGFID 970
Query: 514 YYKGDFL---DELPGLVDFTVLLKLTPRQKHETGKLKNISRKF-----KVSSMGSALYLH 565
Y+G D LPGL +T+++ T Q KL+++ + + +V + +H
Sbjct: 971 NYEGSGSGSGDALPGLQIYTLVMNSTDIQHKILTKLQDVIKTYFGYPLEVELQITLAAIH 1030
Query: 566 PRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLCESSNEKLLVFSQYLL 625
P L+ ++ C + ++ + K D K G K F +N++ EK+L+F +
Sbjct: 1031 PWLVTSSNCCTKFFNPQELSEIGKLKHDAKKGSKVMFVLNLI-FRVVKREKILIFCHNIA 1089
Query: 626 PLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPD-AKIFFGSIKACGEG 684
P++ L W G+ +R ++KF + +++ SI AC EG
Sbjct: 1090 PIRMFTELFENIFRWQRGREILTLTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEG 1149
Query: 685 ISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEEDDHITCFKKE 744
ISL ASRV++LD NPS T+QAI RAFRPGQ K V+VY+L++ + EED + KE
Sbjct: 1150 ISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKE 1209
Query: 745 LISKMWFEWNEYCGDRA-FQVETVSVNECGDEFLETPMLGED-VKALY 790
+S M F E+ D + +Q E + D+ L ++GED VK+ +
Sbjct: 1210 WVSCMIFS-EEFVADPSLWQAEKIE-----DDILRE-IVGEDKVKSFH 1250
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 316/638 (49%), Gaps = 66/638 (10%)
Query: 184 HSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKVKRSTRT------YMADSWNAKAKVDVY 237
H FVL D++G C C + I+ I K + S D + + D
Sbjct: 491 HDFVLDDEIGLKCVHCAYVAVEIKDISPAMDKYRPSVNDNKKCSDRKGDPLPNRLEFDAS 550
Query: 238 GVN---IAEDDIMFTEISAHPRHMKQMKSHKIEGFNFLVRNLVGDN------------PG 282
+ D+I T P + H+ EGF F+ +NL G G
Sbjct: 551 DPSSFVAPLDNIEGTVWQYVPGIKDTLYPHQQEGFEFIWKNLAGTTKINELNSVGVKGSG 610
Query: 283 GCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYD 342
GCI++H G+GKT + + F+QS+L ++PN+ P+V+ P ++ TW+ E + W V +IP Y+
Sbjct: 611 GCIISHKAGTGKTRLTVVFLQSYLKRFPNSHPMVIAPATLMRTWEDEVRKWNV-NIPFYN 669
Query: 343 FYTVK--------ADSR--------SQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNS 386
+++ A SR S ++ L W + KSIL + Y + + + +T
Sbjct: 670 MNSLQLSGYEDAEAVSRLEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEG 729
Query: 387 ISISCQDILLKVPSILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFN 446
+ + + +L+++P +L+LDEGH PRN+++ + + L +V+T +++ LSGTL+QN+ KE+ N
Sbjct: 730 MQV-FRRMLVELPGLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSN 788
Query: 447 ILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKRKIAVVQDLRE 506
+L L RP I RIH S + + E+ + DL+
Sbjct: 789 VLCLARPA-----DKDTISSRIHELSKCSQEGEHGRVNEENR------------IVDLKA 831
Query: 507 MTSKVLHYYKGDFLDE-LPGLVDFTVLLKLTPRQKHETGKLKNISRKFKVSSMGSALYLH 565
M + +H ++G L E LPGL D V+L +QK ++ F+ SA+ +H
Sbjct: 832 MIAHFVHVHEGTILQESLPGLRDCVVVLNPPFQQKKILDRIDTSQNTFEFEHKLSAVSVH 891
Query: 566 PRLIPVADKCG-ENSVSDQMVDDLIEKLDVK--DGVKSKFFMNILNLCESSNEKLLVFSQ 622
P L + E+ V +++L +K +GVK+KF ++ + + + EK+LV+SQ
Sbjct: 892 PSLYLCCNPTKKEDLVIGPATLGTLKRLRLKYEEGVKTKFLIDFIRISGTVKEKVLVYSQ 951
Query: 623 YLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDA--KIFFGSIKA 680
Y+ LK + ++ W+ G+ R+ ++ FN PD+ K+ S KA
Sbjct: 952 YIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFN-KPDSGSKVLLASTKA 1010
Query: 681 CGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEEDDHITC 740
C EGISLVGASRV+ILDV NPSV QAI RAFR GQ + VF+Y L+ D+ E + +
Sbjct: 1011 CSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSEWNKYCKQ 1070
Query: 741 FKKELISKMWF-EWNEYCGDRAFQVETVSVNECGDEFL 777
+K IS++ F NE D+ E VS + DE +
Sbjct: 1071 SEKHRISELVFSSTNEK--DKPINNEVVSKDRILDEMV 1106
>AT3G32330.1 | Symbols: | DNA repair protein-related |
chr3:13276082-13277155 FORWARD LENGTH=327
Length = 327
Score = 226 bits (575), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 199/344 (57%), Gaps = 42/344 (12%)
Query: 241 IAEDDIMFTEISAHPRHMKQMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIIS 300
+ +D T I HP H MK H E NFL +NLV +N GCI+A P S KTF++IS
Sbjct: 3 VPKDGFSGTGIFPHPFHKMIMKPHHFEILNFLYKNLVVENSNGCIIAQTPLSEKTFLMIS 62
Query: 301 FMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQ 360
F+ +L K+PN++ L VLPK +L+ LEVLK+
Sbjct: 63 FIYGYLEKHPNSKSLFVLPKWVLN------------------------------LEVLKR 92
Query: 361 WVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLKVPSILILDEGHNPRNENTDMVQS 420
W++ SI+FLG KQFS+IV DNS S SC+DILL + S+++ D G +PRNE ++
Sbjct: 93 WIKTWSIIFLGAKQFSNIVSDNSGAEASDSCRDILLNILSVVVFDRGTDPRNEMMSFLKV 152
Query: 421 LAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISG---- 476
++++KTP KV+L+G+LYQN++KEVFNIL++ P+FL+ I K +++
Sbjct: 153 VSRIKTPHKVLLTGSLYQNNIKEVFNILDVAFPEFLKHNQ---IGKNFRKLLNVEADGPS 209
Query: 477 ---KKSFYDLVEDT-LQKDPDFKRKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVL 532
K +D +E+ L +D D KI + +L+ +T+KV++ +KG+ L E+PGL+DFTV+
Sbjct: 210 TNLKMPLFDKLEEALLSQDSDHGDKICYLTELKMLTNKVIYNHKGECLLEVPGLMDFTVV 269
Query: 533 LKLTPRQKHE-TGKLKNISRKFKVSSMGSALYLHPRLIPVADKC 575
LK T QK + K+ + FK S S + LHP L +D+
Sbjct: 270 LKPTSSQKSAWEVERKSNGKGFKKYSTLSGIMLHPLLCAFSDRA 313
>AT3G32280.1 | Symbols: | ATP-dependent helicase family protein |
chr3:13233832-13240154 FORWARD LENGTH=474
Length = 474
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 156/292 (53%), Gaps = 49/292 (16%)
Query: 164 KDASVNXXXXXXXXXXDDCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKVKRSTRTY 223
KD ++ +C+HS++ K LG+ C +CG+ID+ F + + +
Sbjct: 232 KDEPISNTFEKSGATLTNCEHSWIWKQGLGHTCWICGIIDKDHPLPPGFGSNICKDIK-- 289
Query: 224 MADSWNAKAKVDVYGVNIAEDDIMFTEISAHPRHMKQMKSHKIEGFNFLVRNLVGDNPGG 283
+ + +D T I HP H MK H E NFL +NLV +N G
Sbjct: 290 ---------------MRVPKDGFSGTGIFPHPLHRMIMKPHHFEILNFLYKNLVVENSNG 334
Query: 284 CILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDF 343
CI+A P S KTF++ISF+ +L K+PN++ L VLPK +L+
Sbjct: 335 CIIAQTPLSEKTFLMISFIYGYLEKHPNSKSLFVLPKWVLNG------------------ 376
Query: 344 YTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLKVPSILI 403
LK+W++ +SI+FLG KQFS+IV DNS S SC+DILL + S+++
Sbjct: 377 --------------LKRWIKTRSIIFLGAKQFSNIVSDNSGAEASDSCRDILLNILSVVV 422
Query: 404 LDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKF 455
D G +PRNE ++ ++++KTP KV+L+G+LY+N++KEVFNI ++ P F
Sbjct: 423 FDRGTDPRNEMMCFLKVVSRIKTPHKVLLTGSLYKNNIKEVFNIFDVAFPNF 474
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 156/619 (25%), Positives = 265/619 (42%), Gaps = 106/619 (17%)
Query: 207 ETIFEFQYKVKRSTRTYMAD--SWNAKAKVDVYG-------VNIAEDDIMFTEISAHPRH 257
E + Q+ + T + M D S A+V+V G VN+ + + E PR
Sbjct: 657 ERLRSLQFSARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVRE--IGEEAVRVPRS 714
Query: 258 MK-QMKSHKIEGFNFLVRNLV--------GDNPGGCILAHAPGSGKTFMIISFMQSFLG- 307
+ ++K H++ G F+ N++ GD GCILAH G GKTF +I+F+ + +
Sbjct: 715 ISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRC 774
Query: 308 -KYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKS 366
L+V P +L W+ EF+ W ++ + + SR ++ ++L +W +
Sbjct: 775 VDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGG 834
Query: 367 ILFLGYKQFSSIVCDNSTNSISIS---CQDILLKVPSILILDEGHNPRNENTDMVQSLAK 423
+ +GY F ++ ++ + C + L P IL+ DE H +N D Q+L +
Sbjct: 835 VFLMGYTNFRNLSLGRGVKDLNAARGIC-NALRDGPDILVCDEAHIIKNTKADTTQALKQ 893
Query: 424 VKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDL 483
VK R++ L+G+ QN++ E + +++ VR FL +S R + I +
Sbjct: 894 VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG--SSPEFRNRFQN--PIENGQHMNST 949
Query: 484 VEDTLQKDPDFKRKIAVVQDLREMTSKV-LHYYKGDFLDELPGLVDFTVLLKLTPRQK-- 540
ED + +R + + L+ ++ ++ K D LP F + +KL+P Q+
Sbjct: 950 AEDVKIMN---QRSHILYEQLKGFVQRMDMNVVKKD----LPPKTVFVISVKLSPLQRIL 1002
Query: 541 ---------HETGKLKNISRK--FKVSSMGSALYLHP----------------RLIPVAD 573
G+ RK F + + + HP ++ + D
Sbjct: 1003 YQRFLELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPD 1062
Query: 574 KCGENSVSD---------QMVDDLIEKLD------------------VKD-GVKSKFFMN 605
C + D + ++DL +K+D V D K ++
Sbjct: 1063 DCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLD 1122
Query: 606 ILNLCESSNEKLLVFSQYLLPLKYLE-------RLVMKWKGWSFGKXXXXXXXXXXXXQR 658
IL++ +K LVFSQ + L +E R + K W GK +R
Sbjct: 1123 ILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSER 1182
Query: 659 EWSMNKFNNSPD---AKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRP 715
+ +++F N PD K S +A GI+L A+RV+I+D NP+ QAI RA+R
Sbjct: 1183 QKLVDRF-NEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRY 1241
Query: 716 GQTKKVFVYRLIAADSPEE 734
GQ K VF YRL+A + EE
Sbjct: 1242 GQKKPVFAYRLMARGTIEE 1260
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 156/619 (25%), Positives = 265/619 (42%), Gaps = 106/619 (17%)
Query: 207 ETIFEFQYKVKRSTRTYMAD--SWNAKAKVDVYG-------VNIAEDDIMFTEISAHPRH 257
E + Q+ + T + M D S A+V+V G VN+ + + E PR
Sbjct: 657 ERLRSLQFSARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVRE--IGEEAVRVPRS 714
Query: 258 MK-QMKSHKIEGFNFLVRNLV--------GDNPGGCILAHAPGSGKTFMIISFMQSFLG- 307
+ ++K H++ G F+ N++ GD GCILAH G GKTF +I+F+ + +
Sbjct: 715 ISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRC 774
Query: 308 -KYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKS 366
L+V P +L W+ EF+ W ++ + + SR ++ ++L +W +
Sbjct: 775 VDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGG 834
Query: 367 ILFLGYKQFSSIVCDNSTNSISIS---CQDILLKVPSILILDEGHNPRNENTDMVQSLAK 423
+ +GY F ++ ++ + C + L P IL+ DE H +N D Q+L +
Sbjct: 835 VFLMGYTNFRNLSLGRGVKDLNAARGIC-NALRDGPDILVCDEAHIIKNTKADTTQALKQ 893
Query: 424 VKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDL 483
VK R++ L+G+ QN++ E + +++ VR FL +S R + I +
Sbjct: 894 VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG--SSPEFRNRFQN--PIENGQHMNST 949
Query: 484 VEDTLQKDPDFKRKIAVVQDLREMTSKV-LHYYKGDFLDELPGLVDFTVLLKLTPRQK-- 540
ED + +R + + L+ ++ ++ K D LP F + +KL+P Q+
Sbjct: 950 AEDVKIMN---QRSHILYEQLKGFVQRMDMNVVKKD----LPPKTVFVISVKLSPLQRIL 1002
Query: 541 ---------HETGKLKNISRK--FKVSSMGSALYLHP----------------RLIPVAD 573
G+ RK F + + + HP ++ + D
Sbjct: 1003 YQRFLELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPD 1062
Query: 574 KCGENSVSD---------QMVDDLIEKLD------------------VKD-GVKSKFFMN 605
C + D + ++DL +K+D V D K ++
Sbjct: 1063 DCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLD 1122
Query: 606 ILNLCESSNEKLLVFSQYLLPLKYLE-------RLVMKWKGWSFGKXXXXXXXXXXXXQR 658
IL++ +K LVFSQ + L +E R + K W GK +R
Sbjct: 1123 ILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSER 1182
Query: 659 EWSMNKFNNSPD---AKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRP 715
+ +++F N PD K S +A GI+L A+RV+I+D NP+ QAI RA+R
Sbjct: 1183 QKLVDRF-NEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRY 1241
Query: 716 GQTKKVFVYRLIAADSPEE 734
GQ K VF YRL+A + EE
Sbjct: 1242 GQKKPVFAYRLMARGTIEE 1260
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 156/619 (25%), Positives = 265/619 (42%), Gaps = 106/619 (17%)
Query: 207 ETIFEFQYKVKRSTRTYMAD--SWNAKAKVDVYG-------VNIAEDDIMFTEISAHPRH 257
E + Q+ + T + M D S A+V+V G VN+ + + E PR
Sbjct: 657 ERLRSLQFSARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVRE--IGEEAVRVPRS 714
Query: 258 MK-QMKSHKIEGFNFLVRNLV--------GDNPGGCILAHAPGSGKTFMIISFMQSFLG- 307
+ ++K H++ G F+ N++ GD GCILAH G GKTF +I+F+ + +
Sbjct: 715 ISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRC 774
Query: 308 -KYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKS 366
L+V P +L W+ EF+ W ++ + + SR ++ ++L +W +
Sbjct: 775 VDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGG 834
Query: 367 ILFLGYKQFSSIVCDNSTNSISIS---CQDILLKVPSILILDEGHNPRNENTDMVQSLAK 423
+ +GY F ++ ++ + C + L P IL+ DE H +N D Q+L +
Sbjct: 835 VFLMGYTNFRNLSLGRGVKDLNAARGIC-NALRDGPDILVCDEAHIIKNTKADTTQALKQ 893
Query: 424 VKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDL 483
VK R++ L+G+ QN++ E + +++ VR FL +S R + I +
Sbjct: 894 VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG--SSPEFRNRFQN--PIENGQHMNST 949
Query: 484 VEDTLQKDPDFKRKIAVVQDLREMTSKV-LHYYKGDFLDELPGLVDFTVLLKLTPRQK-- 540
ED + +R + + L+ ++ ++ K D LP F + +KL+P Q+
Sbjct: 950 AEDVKIMN---QRSHILYEQLKGFVQRMDMNVVKKD----LPPKTVFVISVKLSPLQRIL 1002
Query: 541 ---------HETGKLKNISRK--FKVSSMGSALYLHP----------------RLIPVAD 573
G+ RK F + + + HP ++ + D
Sbjct: 1003 YQRFLELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPD 1062
Query: 574 KCGENSVSD---------QMVDDLIEKLD------------------VKD-GVKSKFFMN 605
C + D + ++DL +K+D V D K ++
Sbjct: 1063 DCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLD 1122
Query: 606 ILNLCESSNEKLLVFSQYLLPLKYLE-------RLVMKWKGWSFGKXXXXXXXXXXXXQR 658
IL++ +K LVFSQ + L +E R + K W GK +R
Sbjct: 1123 ILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSER 1182
Query: 659 EWSMNKFNNSPD---AKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRP 715
+ +++F N PD K S +A GI+L A+RV+I+D NP+ QAI RA+R
Sbjct: 1183 QKLVDRF-NEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRY 1241
Query: 716 GQTKKVFVYRLIAADSPEE 734
GQ K VF YRL+A + EE
Sbjct: 1242 GQKKPVFAYRLMARGTIEE 1260
>AT3G31900.1 | Symbols: | ATP-dependent helicase family protein |
chr3:12875071-12877422 FORWARD LENGTH=393
Length = 393
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 148/294 (50%), Gaps = 60/294 (20%)
Query: 164 KDASVNXXXXXXXXXXDDCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKVKRSTRTY 223
KD ++ +C+HS++ K G +C Y ++ S+
Sbjct: 137 KDEPISNTFEKSRATLTNCEHSWIWKQGFGDMC-----------------YHLQGSS--- 176
Query: 224 MADSWNAKAKVDVYGVNIAEDDIMFTEISAHPRHMKQMKSHKIEGFNFLVRNLVGDNPGG 283
+A + + D+ + + +D T I HP H MK H E NFL +NLV +N G
Sbjct: 177 VATGFRSNICKDI-KMRVPKDSFSGTGIFPHPLHKMIMKPHHFEILNFLCKNLVVENSNG 235
Query: 284 CILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDF 343
CI+ P S KTF++ISF+ ++G + +K+F +V D+ L DF
Sbjct: 236 CIIDQTPLSEKTFLMISFI--YVG---------------VERLEKKFGELKVNDLVLLDF 278
Query: 344 YTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLKVPSILI 403
Y+ KA + KQFS+IV DNS S SC+DILL + S+++
Sbjct: 279 YSTKASA----------------------KQFSNIVSDNSGAEASDSCRDILLNILSVVV 316
Query: 404 LDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLR 457
G +PRNE ++ ++++KTP KV+L+G+LYQN++KEVFNIL++ P+FL+
Sbjct: 317 FGRGTDPRNEMMSFLKVVSRIKTPHKVLLTGSLYQNNIKEVFNILDVAFPEFLK 370
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 154/616 (25%), Positives = 255/616 (41%), Gaps = 121/616 (19%)
Query: 207 ETIFEFQYKVKRSTRTYMAD--SWNAKAKVDVYG-------VNIAEDDIMFTEISAHPRH 257
E + Q+ + T + M D S A+V+V G VN+ + + E PR
Sbjct: 657 ERLRSLQFSARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVRE--IGEEAVRVPRS 714
Query: 258 MK-QMKSHKIEGFNFLVRNLV--------GDNPGGCILAHAPGSGKTFMIISFMQSFLG- 307
+ ++K H++ G F+ N++ GD GCILAH G GKTF +I+F+ + +
Sbjct: 715 ISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRC 774
Query: 308 -KYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKS 366
L+V P +L W+ EF+ W ++ + + SR +
Sbjct: 775 VDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRYK------------- 821
Query: 367 ILFLGYKQFSSIVCDNSTNSISISCQDILLKVPSILILDEGHNPRNENTDMVQSLAKVKT 426
F + F + N+ I + +D P IL+ DE H +N D Q+L +VK
Sbjct: 822 --FFYERNFWGVKDLNAARGICNALRD----GPDILVCDEAHIIKNTKADTTQALKQVKC 875
Query: 427 PRKVVLSGTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVED 486
R++ L+G+ QN++ E + +++ VR FL +S R + I + ED
Sbjct: 876 QRRIALTGSPLQNNLMEYYCMVDFVREGFLG--SSPEFRNRFQN--PIENGQHMNSTAED 931
Query: 487 TLQKDPDFKRKIAVVQDLREMTSKV-LHYYKGDFLDELPGLVDFTVLLKLTPRQK----- 540
+ +R + + L+ ++ ++ K D LP F + +KL+P Q+
Sbjct: 932 VKIMN---QRSHILYEQLKGFVQRMDMNVVKKD----LPPKTVFVISVKLSPLQRILYQR 984
Query: 541 ------HETGKLKNISRK--FKVSSMGSALYLHP----------------RLIPVADKCG 576
G+ RK F + + + HP ++ + D C
Sbjct: 985 FLELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCS 1044
Query: 577 ENSVSD---------QMVDDLIEKLD------------------VKD-GVKSKFFMNILN 608
+ D + ++DL +K+D V D K ++IL+
Sbjct: 1045 SDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS 1104
Query: 609 LCESSNEKLLVFSQYLLPLKYLE-------RLVMKWKGWSFGKXXXXXXXXXXXXQREWS 661
+ +K LVFSQ + L +E R + K W GK +R+
Sbjct: 1105 MSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKL 1164
Query: 662 MNKFNNSPD---AKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQT 718
+++F N PD K S +A GI+L A+RV+I+D NP+ QAI RA+R GQ
Sbjct: 1165 VDRF-NEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQK 1223
Query: 719 KKVFVYRLIAADSPEE 734
K VF YRL+A + EE
Sbjct: 1224 KPVFAYRLMARGTIEE 1239
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 239/557 (42%), Gaps = 84/557 (15%)
Query: 242 AEDDIM--FTEISAHPRHMKQMKSHKIEGFNFL---VRNLVGD-NPGGCILAHAPGSGKT 295
+E+D M T I H +K ++ H+ EG F+ V L G N GCILA G GKT
Sbjct: 159 SEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKT 218
Query: 296 FMIISFMQSFLGKYPNARPLV-----VLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADS 350
I+ + + L + + P+V V P ++S W+ E + W + I L D
Sbjct: 219 LQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDD 278
Query: 351 RSQQLEVLKQWVECKSILFLGYKQF---SSIVCDNSTNSISISCQDILLKVPSILILDEG 407
++ + +L + Y+ F SS C S SC +LI DE
Sbjct: 279 VLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQ------SESC--------DLLICDEA 324
Query: 408 HNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL------RMETS 461
H +N+ T ++LA + R+V+LSGT QN ++E F ++N P L R
Sbjct: 325 HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYE 384
Query: 462 RPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKRKIAVVQDLREMTSKVLHYYKGDFLD 521
PI I G++ E L D + V Q + T+ +L +
Sbjct: 385 API---------ICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNH------ 429
Query: 522 ELPGLVDFTVLLKLTPRQKHETG--------KLKNISRKFKVSSMGSALYL---HPRLIP 570
LP + V K+T Q G L + +++ KV + +AL HP+LI
Sbjct: 430 -LPPKIIEVVCCKMTTLQTTYNGCLCMQLKRALADNAKQTKVLAYITALKKLCNHPKLIY 488
Query: 571 VADKCG-------ENSVS---DQMVDDLIEKLDVKDG--VKSKFFMNIL-----NLCESS 613
K G EN + +M DG V+ M++L NL +
Sbjct: 489 DTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKT 548
Query: 614 NEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNN-SPDAK 672
++++++ S Y L +L + + + F + +R+ +N+ N+ + D
Sbjct: 549 DDRIVLVSNYTQTLDLFAQLC-RERRYPFLR----LDGSTTISKRQKLVNRLNDPTKDEF 603
Query: 673 IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 732
F S KA G G++L+GA+R+++ D NP+ +QA R +R GQ K+V+VYR ++ +
Sbjct: 604 AFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTI 663
Query: 733 EEDDHITCFKKELISKM 749
EE + KE + K+
Sbjct: 664 EEKVYQRQMSKEGLQKV 680
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 240/559 (42%), Gaps = 86/559 (15%)
Query: 242 AEDDIM--FTEISAHPRHMKQMKSHKIEGFNFL---VRNLVGD-NPGGCILAHAPGSGKT 295
+E+D M T I H +K ++ H+ EG F+ V L G N GCILA G GKT
Sbjct: 159 SEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKT 218
Query: 296 FMIISFMQSFLGKYPNARPLV-----VLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADS 350
I+ + + L + + P+V V P ++S W+ E + W + I L D
Sbjct: 219 LQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDD 278
Query: 351 RSQQLEVLKQWVECKSILFLGYKQF---SSIVCDNSTNSISISCQDILLKVPSILILDEG 407
++ + +L + Y+ F SS C S SC +LI DE
Sbjct: 279 VLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQ------SESC--------DLLICDEA 324
Query: 408 HNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL------RMETS 461
H +N+ T ++LA + R+V+LSGT QN ++E F ++N P L R
Sbjct: 325 HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYE 384
Query: 462 RPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKRKIAVVQDLREMTSKVLHYYKGDFLD 521
PI I G++ E L D + V Q + T+ +L +
Sbjct: 385 API---------ICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNH------ 429
Query: 522 ELPGLVDFTVLLKLTPRQ----------KHETGKLKNISRKFKVSSMGSALYL---HPRL 568
LP + V K+T Q K+ L + +++ KV + +AL HP+L
Sbjct: 430 -LPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYITALKKLCNHPKL 488
Query: 569 IPVADKCG-------ENSVS---DQMVDDLIEKLDVKDG--VKSKFFMNIL-----NLCE 611
I K G EN + +M DG V+ M++L NL
Sbjct: 489 IYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRR 548
Query: 612 SSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNN-SPD 670
+++++++ S Y L +L + + + F + +R+ +N+ N+ + D
Sbjct: 549 KTDDRIVLVSNYTQTLDLFAQLC-RERRYPFLR----LDGSTTISKRQKLVNRLNDPTKD 603
Query: 671 AKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 730
F S KA G G++L+GA+R+++ D NP+ +QA R +R GQ K+V+VYR ++
Sbjct: 604 EFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTG 663
Query: 731 SPEEDDHITCFKKELISKM 749
+ EE + KE + K+
Sbjct: 664 TIEEKVYQRQMSKEGLQKV 682
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 208/493 (42%), Gaps = 67/493 (13%)
Query: 263 SHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP-LVVLPKG 321
+H++E N+L R ILA G GKT +F+ S ++ ARP LV++P
Sbjct: 691 AHQLEALNWLRR--CWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLS 748
Query: 322 ILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFL----GYKQFSS 377
+ W EF W PL + ++ + + +W S YK F+
Sbjct: 749 TMPNWLSEFSLW----APLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYK-FNV 803
Query: 378 IVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTL 436
++ +T + ++ L VP +L++DEGH +N + + L +V+L+GT
Sbjct: 804 LL---TTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTP 860
Query: 437 YQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKR 496
QN++ E++N+LN + + S ++ F+DL + +K + K+
Sbjct: 861 LQNNIGEMYNLLNFL--------------QPSSFPSLSSFEERFHDLT--SAEKVEELKK 904
Query: 497 KIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKH--------ETGKLKN 548
+A +L K D + +P + V ++LT Q L+N
Sbjct: 905 LVA---------PHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRN 955
Query: 549 ISRKFKVSSMGSALYL------HPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKF 602
I + SM + + HP LIP G S + + + + +K K
Sbjct: 956 IGKGVAQQSMLNIVMQLRKVCNHPYLIP-----GTEPESGSL--EFLHDMRIKASAKLTL 1008
Query: 603 FMNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFG-KXXXXXXXXXXXXQREWS 661
++L + ++L+FSQ L LE + FG K R+ +
Sbjct: 1009 LHSMLKVLHKEGHRVLIFSQMTKLLDILE----DYLNIEFGPKTFERVDGSVAVADRQAA 1064
Query: 662 MNKFNNSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 721
+ +FN + +F S +ACG GI+L A V+I D NP QA+ RA R GQ+K++
Sbjct: 1065 IARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1124
Query: 722 FVYRLIAADSPEE 734
VYRL+ S EE
Sbjct: 1125 LVYRLVVRASVEE 1137
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 216/519 (41%), Gaps = 83/519 (15%)
Query: 264 HKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGIL 323
H+ EG N+L +L GG IL G GKT I SF+ R LVV PK +L
Sbjct: 380 HQREGLNWLW-SLHTQGKGG-ILGDDMGLGKTMQICSFLAGLFHSKLIKRALVVAPKTLL 437
Query: 324 STWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNS 383
W KE T + + ++Y +R L + ++ K IL Y + N+
Sbjct: 438 PHWMKELATVGLSQMT-REYYGTSTKAREYDLHHI---LQGKGILLTTYD-----IVRNN 488
Query: 384 TNSIS-----ISCQDILLKVPSILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQ 438
T ++ D +ILDEGH +N NT +SL ++ + ++++SGT Q
Sbjct: 489 TKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQ 548
Query: 439 NHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYD------LVEDTLQKDP 492
N++KE++ + N P L G K+++ ++ T +
Sbjct: 549 NNLKELWALFNFSCPGLL-------------------GDKNWFKQNYEHYILRGTDKNAT 589
Query: 493 DFKRKIA--VVQDLREMTSK-VLHYYKGDFLDE------LPGLVDFTVLLKLTPRQKHET 543
D +++I V ++LRE L K + + L + V L+LT Q+
Sbjct: 590 DREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLY 649
Query: 544 GKLKN---ISRKFKVSSMGSALYL-----HPRLIP--VADKC----------GENSVSDQ 583
N + F S + + L HP L+ A+ E V+++
Sbjct: 650 EAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAER 709
Query: 584 MVDDLIEKLDVKD--------GVKSKFFMNILNLCESSNEKLLVFSQYLLPLKYLERLVM 635
+ + + +D D K F M++L ++L+FSQ L ++ +
Sbjct: 710 LAMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLT 769
Query: 636 KWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAKIFFGSIKACGEGISLVGASRVLI 695
G+SF + R ++ +F A IF + + G G++L A RV++
Sbjct: 770 S-NGYSFLR----IDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIV 824
Query: 696 LDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEE 734
+D NPS Q++ RA+R GQTK V VYRL+ + + EE
Sbjct: 825 VDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEE 863
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 216/484 (44%), Gaps = 62/484 (12%)
Query: 261 MKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP-LVVLP 319
+ ++++EG NFL ILA G GKT I+F+ S + N P LVV P
Sbjct: 184 LHTYQLEGLNFL--RYSWSKKTNVILADEMGLGKTIQSIAFLASLFEE--NLSPHLVVAP 239
Query: 320 KGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYK-QFSSI 378
+ W++EF TW P + DS ++ + W E + G K +F +
Sbjct: 240 LSTIRNWEREFATWA----PHMNVVMYTGDSEARDV----IW-EHEFYFSEGRKSKFDVL 290
Query: 379 VCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLY 437
+ IS +L + + +I+DEGH +N+ + + SL++ + V+L+GT
Sbjct: 291 LTTYEMVHPGIS---VLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPL 347
Query: 438 QNHVKEVFNILNLVRP-KFLRMETSRPIVKRIH-SRVH-ISGKKSFYDLVEDTLQKDPDF 494
QN++ E+F +++ + KF +E + I K SR+H + L +D L+
Sbjct: 348 QNNLNELFALMHFLDADKFGSLEKFQDINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPP 407
Query: 495 KRKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFK 554
K+++ + D M+S+ YK + ++ VL K K+ N+ K +
Sbjct: 408 KKELILRVD---MSSQQKEVYKAVITN------NYQVL------TKKRDAKISNVLMKLR 452
Query: 555 VSSMGSALYLHPRLIPVADKCGENSVSDQMVDDLIE---KLDVKDGVKSKFFMNILNLCE 611
+ HP L+P + E++ ++ L+E KL + D + K +
Sbjct: 453 ------QVCSHPYLLPDFEPRFEDA--NEAFTKLLEASGKLQLLDKMMVKL--------K 496
Query: 612 SSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDA 671
++L+++Q+ L LE +K W++ + +R+ +++FN
Sbjct: 497 EQGHRVLIYTQFQHTLYLLEDY-FTFKNWNYERIDGKISGP----ERQVRIDRFNAENSN 551
Query: 672 KI-FFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 730
+ F S +A G GI+L A V+I D NP QA+ R R GQT KV +YRLI
Sbjct: 552 RFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKG 611
Query: 731 SPEE 734
+ EE
Sbjct: 612 TVEE 615
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 216/484 (44%), Gaps = 62/484 (12%)
Query: 261 MKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP-LVVLP 319
+ ++++EG NFL ILA G GKT I+F+ S + N P LVV P
Sbjct: 225 LHTYQLEGLNFL--RYSWSKKTNVILADEMGLGKTIQSIAFLASLFEE--NLSPHLVVAP 280
Query: 320 KGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYK-QFSSI 378
+ W++EF TW P + DS ++ + W E + G K +F +
Sbjct: 281 LSTIRNWEREFATW----APHMNVVMYTGDSEARDV----IW-EHEFYFSEGRKSKFDVL 331
Query: 379 VCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLY 437
+ IS +L + + +I+DEGH +N+ + + SL++ + V+L+GT
Sbjct: 332 LTTYEMVHPGIS---VLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPL 388
Query: 438 QNHVKEVFNILNLVRP-KFLRMETSRPIVKRIH-SRVH-ISGKKSFYDLVEDTLQKDPDF 494
QN++ E+F +++ + KF +E + I K SR+H + L +D L+
Sbjct: 389 QNNLNELFALMHFLDADKFGSLEKFQDINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPP 448
Query: 495 KRKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFK 554
K+++ + D M+S+ YK + ++ VL K K+ N+ K +
Sbjct: 449 KKELILRVD---MSSQQKEVYKAVITN------NYQVL------TKKRDAKISNVLMKLR 493
Query: 555 VSSMGSALYLHPRLIPVADKCGENSVSDQMVDDLIE---KLDVKDGVKSKFFMNILNLCE 611
+ HP L+P + E++ ++ L+E KL + D + K +
Sbjct: 494 ------QVCSHPYLLPDFEPRFEDA--NEAFTKLLEASGKLQLLDKMMVKL--------K 537
Query: 612 SSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDA 671
++L+++Q+ L YL +K W++ + +R+ +++FN
Sbjct: 538 EQGHRVLIYTQFQHTL-YLLEDYFTFKNWNYERIDGKISGP----ERQVRIDRFNAENSN 592
Query: 672 KI-FFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 730
+ F S +A G GI+L A V+I D NP QA+ R R GQT KV +YRLI
Sbjct: 593 RFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKG 652
Query: 731 SPEE 734
+ EE
Sbjct: 653 TVEE 656
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 211/495 (42%), Gaps = 67/495 (13%)
Query: 261 MKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP-LVVLP 319
++ +++EG NFLV + + D ILA G GKT +S + P LVV+P
Sbjct: 625 LRDYQLEGLNFLVNSWLNDT--NVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVP 682
Query: 320 KGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIV 379
L+ W KEF+ W +P + S+++ C+ F K+ +
Sbjct: 683 LSTLANWAKEFRKW----LPGMNIIVYVGTRASREV--------CQQYEFYNEKKVGRPI 730
Query: 380 CDN---STNSISISCQDILLKVPSI-LILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGT 435
N +T + + + +L K+ I L++DE H +N + +L + T K++++GT
Sbjct: 731 KFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGT 790
Query: 436 LYQNHVKEVFNILNLVRP-KFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDF 494
QN V+E++ +L+ + P KF K+ + VE+
Sbjct: 791 PLQNSVEELWALLHFLDPGKF----------------------KNKDEFVENYKNLSSFN 828
Query: 495 KRKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKH--------ETGKL 546
+ ++A + E+ +L D LP ++ + ++++P QK L
Sbjct: 829 ESELANLH--LELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDL 886
Query: 547 KNISRKFKVSSMGSALYL-----HPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSK 601
R +VS + + L HP L AD ++D + ++K+ + G K
Sbjct: 887 NKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDIND---NSKLDKIILSSG-KLV 942
Query: 602 FFMNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWS 661
+L + ++L+FSQ + L L + +G+ F + R+ +
Sbjct: 943 ILDKLLVRLRETKHRVLIFSQMVRMLDILAEY-LSLRGFQFQRLDGSTKAEL----RQQA 997
Query: 662 MNKFNN-SPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 720
M+ FN + D F S +A G GI+L A V+I D NP QA+ RA R GQ +
Sbjct: 998 MDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEV 1057
Query: 721 VFVYRLIAADSPEED 735
V +YR + + S EE+
Sbjct: 1058 VNIYRFVTSKSVEEE 1072
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 219/509 (43%), Gaps = 62/509 (12%)
Query: 248 FTEISAHPRHMKQM-KSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFL 306
F + P +K + +++EG NFL ILA G GKT I+ + S
Sbjct: 259 FQQFDHTPEFLKGLLHPYQLEGLNFL--RFSWSKQTHVILADEMGLGKTIQSIALLASLF 316
Query: 307 GKYPNARP-LVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEV-LKQWVEC 364
+ N P LV+ P L W++EF TW + + F T +A + ++ E L + +
Sbjct: 317 EE--NLIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKK 374
Query: 365 KSILFLGYKQFSS------IVCDNSTNSISISCQDILLKVP---SILILDEGHNPRNENT 415
G Q SS I D S + D + P +I+DEGH +N+++
Sbjct: 375 IKKKKSG--QISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDS 432
Query: 416 DMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRP-KFLRMETSRPIVKRIH----- 469
+ SL + + +++L+GT QN++ E+F +++ + KF +E + K I+
Sbjct: 433 KLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQI 492
Query: 470 SRVHISGKKSFYDLVEDTLQKDPDFKRKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDF 529
SR+H V+ + KD K+++ + DL + + YYK F ++
Sbjct: 493 SRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKE---YYKAIFTR------NY 543
Query: 530 TVLLKLTPRQKHETGKLKNISRKFKVSSMGSALYLHPRLIPVADKCGENSVSDQMVDDLI 589
VL K Q L NI + + + HP ++ + ++ ++ L+
Sbjct: 544 QVLTKKGGAQI----SLNNIMMELR------KVCCHPYMLEGVEPVIHDA--NEAFKQLL 591
Query: 590 E---KLDVKDGVKSKFFMNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXX 646
E KL + D + K + ++L+++Q+ L LE K W + +
Sbjct: 592 ESCGKLQLLDKMMVKL--------KEQGHRVLIYTQFQHMLDLLEDYCTH-KKWQYERID 642
Query: 647 XXXXXXXXXXQREWSMNKFNNSPDAKI-FFGSIKACGEGISLVGASRVLILDVHLNPSVT 705
+R+ +++FN K F S +A G GI+L A V+I D NP
Sbjct: 643 GKVGGA----ERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHAD 698
Query: 706 RQAIGRAFRPGQTKKVFVYRLIAADSPEE 734
QA+ RA R GQT KV +YRLI + EE
Sbjct: 699 LQAMARAHRLGQTNKVMIYRLINRGTIEE 727
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 215/482 (44%), Gaps = 45/482 (9%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP-LVVL 318
+++S+++EG ++V +L +N G ILA G GKT IS + L P L+V
Sbjct: 402 ELRSYQLEGLQWMV-SLFNNNLNG-ILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVA 459
Query: 319 PKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSI 378
PK +L W EF TW V I + + D R ++ + +++ + + + + I
Sbjct: 460 PKAVLPNWVNEFATW-VPSIAAFLY-----DGRLEERKAIREKIAGEGKFNVLITHYDLI 513
Query: 379 VCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQS-LAKVKTPRKVVLSGTL 436
+ D + L K+ +I+DEGH +N + + ++ L + R+++L+GT
Sbjct: 514 MRDKA----------FLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTP 563
Query: 437 YQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKR 496
QN ++E++++LN + P + + + ++ G S D +
Sbjct: 564 IQNSLQELWSLLNFLLPHIF--NSVQNFEEWFNAPFADRGNVSLTD------------EE 609
Query: 497 KIAVVQDLREMTSKVLHYYKGDFLDE-LPGLVDFTVLLKLTPRQKHETGKLKNISRKFKV 555
++ ++ L + + K D +++ LPG + ++ QK ++ ++ R
Sbjct: 610 ELLIIHRLHHVIRPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQ 669
Query: 556 SSMGSALYLHPRLIPVADKCGENSVSDQMVDDLIEKLD-VKDGVKSKFFMNILNLCESSN 614
+ G + L + + C + ++ +K + V+ K + +L +
Sbjct: 670 TGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLRKAG 729
Query: 615 EKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAK-- 672
++L+FSQ + LE + + + + + QR + +F N PD+
Sbjct: 730 HRILLFSQMTRLIDVLE-IYLTLNDYKYLR----LDGTTKTDQRGLLLKQF-NEPDSPYF 783
Query: 673 IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 732
+F S +A G G++L A V+I D NP + +QA RA R GQ K+V V+ L++ S
Sbjct: 784 MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSV 843
Query: 733 EE 734
EE
Sbjct: 844 EE 845
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 231/550 (42%), Gaps = 69/550 (12%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLP 319
Q+KS++++G +L+ + N ILA G GKT I F+ G + LV+ P
Sbjct: 201 QLKSYQLKGVKWLIS--LWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLDGPYLVIAP 258
Query: 320 KGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIV 379
LS W E + P + D ++Q+ E+ ++ + K++ G K F ++
Sbjct: 259 LSTLSNWFNEIARF----TPSINAIIYHGD-KNQRDELRRKHMP-KTV---GPK-FPIVI 308
Query: 380 CDNSTNSISISCQD---ILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGT 435
S ++ D IL P +++DEGH +N +++ L +K K++L+GT
Sbjct: 309 T-----SYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGT 363
Query: 436 LYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVE---DTLQKDP 492
QN++ E++++LN + P TS H +S++D E + K+
Sbjct: 364 PLQNNLSELWSLLNFILPDIF---TS-------HDEF-----ESWFDFSEKNKNEATKEE 408
Query: 493 DFKRKIAVVQDLREMTSK-VLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISR 551
+ KR+ VV L + +L K D LP + + +T QK L N +
Sbjct: 409 EEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTL 468
Query: 552 KF-----KVSSMGSALYLHPRLIPVADKCGENSVSDQMVDD--LIEKLDVKDGVKSKFFM 604
+ + G L+ +I + C + +D L ++ G KF +
Sbjct: 469 EAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRL 528
Query: 605 NILNLCE--SSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSM 662
L ++N K+L+FSQ+ K L+ +M + G +R +
Sbjct: 529 LERLLVRLFANNHKVLIFSQWT---KLLD--IMDYYFSEKGFEVCRIDGSVKLDERRRQI 583
Query: 663 NKFNNSPDA-KIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 721
F++ + IF S +A G GI+L A ++ D NP + QA+ R R GQTK V
Sbjct: 584 KDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPV 643
Query: 722 FVYRLIAADSPEEDDHITCFKKELISKMWFEWNEYCGDRAFQVETVSVNECGDEFLETPM 781
VYRL A S E T K SK+ E + G F E + TP+
Sbjct: 644 HVYRLSTAQSIE-----TRVLKRAYSKLKLE-HVVIGQGQFHQERAKSS--------TPL 689
Query: 782 LGEDVKALYK 791
ED+ AL K
Sbjct: 690 EEEDILALLK 699
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 206/508 (40%), Gaps = 77/508 (15%)
Query: 282 GGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTW----QVED 337
G I+ G GKT ++SF+ S +++ P +L W++E Q W VE
Sbjct: 404 AGGIIGDEMGLGKTIQVLSFLGSLHFSKMYKPSIIICPVTLLRQWRREAQKWYPDFHVE- 462
Query: 338 IPLYDFYTVKADSRSQ---------QLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSIS 388
L+D + Q + E KS + + V ++ + +
Sbjct: 463 -ILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLI 521
Query: 389 ISCQDILLKVPSIL-------ILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHV 441
+ + + L+ +L +LDEGH RN N+D+ +++T +++++G QN +
Sbjct: 522 TTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKL 581
Query: 442 KEVFNILNLVRPKFL------RMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFK 495
E++++ + V P L E S PI + G + L T
Sbjct: 582 TELWSLFDFVFPGKLGVLPVFEAEFSVPIT--------VGGYANASPLQVSTAY------ 627
Query: 496 RKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFKV 555
R V++DL + +L K D L + + LT Q+ + R F
Sbjct: 628 RCAVVLRDL--IMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQR-------STYRAFLA 678
Query: 556 SSMGSALYLHPR----LIPVADKCGENSVSDQMVDDLIEKL---------DVKDGVKSKF 602
SS ++ R I V K + DL+E+ + + K K
Sbjct: 679 SSEVEQIFDGNRNSLYGIDVMRKICNHP-------DLLEREHSHQNPDYGNPERSGKMKV 731
Query: 603 FMNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSM 662
+L + + ++L+FSQ L LE ++ +S+ + QR +
Sbjct: 732 VAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVA-NEYSYRRMDGLTPVK----QRMALI 786
Query: 663 NKFNNSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVF 722
++FNNS D +F + K G G +L GA+RV+I D NPS QA RA+R GQ K V
Sbjct: 787 DEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVT 846
Query: 723 VYRLIAADSPEED-DHITCFKKELISKM 749
VYRLI + EE H +K L +K+
Sbjct: 847 VYRLITRGTIEEKVYHRQIYKHFLTNKI 874
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 213/501 (42%), Gaps = 74/501 (14%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYP--NARPLVV 317
+M+ +++ G N+L+R + +N ILA G GKT IS + ++L +Y N +VV
Sbjct: 188 KMRDYQLAGLNWLIR--LYENGINGILADEMGLGKTLQTISLL-AYLHEYRGINGPHMVV 244
Query: 318 LPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSS 377
PK L W E + + P+ VK ++ +++ +L G +F
Sbjct: 245 APKSTLGNWMNEIRRF----CPV--LRAVKFLGNPEERRHIRE-----DLLVAG--KFDI 291
Query: 378 IVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTL 436
V ++ ++I + L + +I+DE H +NEN+ + +++ T +++++GT
Sbjct: 292 CV---TSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 348
Query: 437 YQNHVKEVFNILNLVRPK-FLRMET------------SRPIVKRIHSRVHISGKKSFYDL 483
QN++ E++ +LN + P+ F ET + +V+++H + +
Sbjct: 349 LQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD 408
Query: 484 VEDTLQKDPDFKRKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKHET 543
VE L P K I V M+ YYK +L + E
Sbjct: 409 VEKGL---PPKKETILKVG----MSQMQKQYYKALLQKDLEAV-----------NAGGER 450
Query: 544 GKLKNISRKFKVSSMGSALYLHPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFF 603
+L NI+ + + HP L A+ + D ++ + K
Sbjct: 451 KRLLNIAMQLRKCCN------HPYLFQGAEPGPPYTTGDHLI---------TNAGKMVLL 495
Query: 604 MNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMN 663
+L + + ++L+FSQ L LE +M ++G+ + + +R+ S+
Sbjct: 496 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLM-YRGYLYCRIDGNTGGD----ERDASIE 550
Query: 664 KFNNSPDAK-IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVF 722
+N K +F S +A G GI+L A V++ D NP V QA RA R GQ K+V
Sbjct: 551 AYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQ 610
Query: 723 VYRLIAADSPEEDDHITCFKK 743
V+R + EE +KK
Sbjct: 611 VFRFCTESAIEEKVIERAYKK 631
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 213/501 (42%), Gaps = 74/501 (14%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYP--NARPLVV 317
+M+ +++ G N+L+R + +N ILA G GKT IS + ++L +Y N +VV
Sbjct: 188 KMRDYQLAGLNWLIR--LYENGINGILADEMGLGKTLQTISLL-AYLHEYRGINGPHMVV 244
Query: 318 LPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSS 377
PK L W E + + P+ VK ++ +++ +L G +F
Sbjct: 245 APKSTLGNWMNEIRRF----CPV--LRAVKFLGNPEERRHIRE-----DLLVAG--KFDI 291
Query: 378 IVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTL 436
V ++ ++I + L + +I+DE H +NEN+ + +++ T +++++GT
Sbjct: 292 CV---TSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 348
Query: 437 YQNHVKEVFNILNLVRPK-FLRMET------------SRPIVKRIHSRVHISGKKSFYDL 483
QN++ E++ +LN + P+ F ET + +V+++H + +
Sbjct: 349 LQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD 408
Query: 484 VEDTLQKDPDFKRKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKHET 543
VE L P K I V M+ YYK +L + E
Sbjct: 409 VEKGL---PPKKETILKVG----MSQMQKQYYKALLQKDLEAV-----------NAGGER 450
Query: 544 GKLKNISRKFKVSSMGSALYLHPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFF 603
+L NI+ + + HP L A+ + D ++ + K
Sbjct: 451 KRLLNIAMQLRKCCN------HPYLFQGAEPGPPYTTGDHLI---------TNAGKMVLL 495
Query: 604 MNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMN 663
+L + + ++L+FSQ L LE +M ++G+ + + +R+ S+
Sbjct: 496 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLM-YRGYLYCRIDGNTGGD----ERDASIE 550
Query: 664 KFNNSPDAK-IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVF 722
+N K +F S +A G GI+L A V++ D NP V QA RA R GQ K+V
Sbjct: 551 AYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQ 610
Query: 723 VYRLIAADSPEEDDHITCFKK 743
V+R + EE +KK
Sbjct: 611 VFRFCTESAIEEKVIERAYKK 631
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 213/501 (42%), Gaps = 74/501 (14%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYP--NARPLVV 317
+M+ +++ G N+L+R + +N ILA G GKT IS + ++L +Y N +VV
Sbjct: 188 KMRDYQLAGLNWLIR--LYENGINGILADEMGLGKTLQTISLL-AYLHEYRGINGPHMVV 244
Query: 318 LPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSS 377
PK L W E + + P+ VK ++ +++ +L G +F
Sbjct: 245 APKSTLGNWMNEIRRF----CPV--LRAVKFLGNPEERRHIRE-----DLLVAG--KFDI 291
Query: 378 IVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTL 436
V ++ ++I + L + +I+DE H +NEN+ + +++ T +++++GT
Sbjct: 292 CV---TSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 348
Query: 437 YQNHVKEVFNILNLVRPK-FLRMET------------SRPIVKRIHSRVHISGKKSFYDL 483
QN++ E++ +LN + P+ F ET + +V+++H + +
Sbjct: 349 LQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD 408
Query: 484 VEDTLQKDPDFKRKIAVVQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLKLTPRQKHET 543
VE L P K I V M+ YYK +L + E
Sbjct: 409 VEKGL---PPKKETILKVG----MSQMQKQYYKALLQKDLEAV-----------NAGGER 450
Query: 544 GKLKNISRKFKVSSMGSALYLHPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFF 603
+L NI+ + + HP L A+ + D ++ + K
Sbjct: 451 KRLLNIAMQLRKCCN------HPYLFQGAEPGPPYTTGDHLI---------TNAGKMVLL 495
Query: 604 MNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMN 663
+L + + ++L+FSQ L LE +M ++G+ + + +R+ S+
Sbjct: 496 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLM-YRGYLYCRIDGNTGGD----ERDASIE 550
Query: 664 KFNNSPDAK-IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVF 722
+N K +F S +A G GI+L A V++ D NP V QA RA R GQ K+V
Sbjct: 551 AYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQ 610
Query: 723 VYRLIAADSPEEDDHITCFKK 743
V+R + EE +KK
Sbjct: 611 VFRFCTESAIEEKVIERAYKK 631
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 214/492 (43%), Gaps = 76/492 (15%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYP--NARPLVV 317
+++ +++ G N+L+R + +N ILA G GKT IS + ++L +Y N +VV
Sbjct: 193 KLRDYQLAGLNWLIR--LYENGINGILADEMGLGKTLQTISLL-AYLHEYRGINGPHMVV 249
Query: 318 LPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSS 377
PK L W E + + P+ VK ++ +++ +L G +F
Sbjct: 250 APKSTLGNWMNEIRRF----CPV--LRAVKFLGNPEERRHIRE-----ELLVAG--KFDI 296
Query: 378 IVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTL 436
V ++ ++I + L + +I+DE H +NEN+ + +++ T +++++GT
Sbjct: 297 CV---TSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 353
Query: 437 YQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKR 496
QN++ E++ +LN + P+ S ++F + + + + D
Sbjct: 354 LQNNLHELWALLNFLLPEVF------------------SSAETFDEWFQISGEND----- 390
Query: 497 KIAVVQDLREMTSK-VLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFKV 555
+ VVQ L ++ +L K D LP + + + ++ QK L + + +V
Sbjct: 391 QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKAL--LQKDLEV 448
Query: 556 SSMGS--------ALYL-----HPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKF 602
+ G A+ L HP L A+ + D +V + K
Sbjct: 449 VNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLV---------TNAGKMVL 499
Query: 603 FMNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSM 662
+L + + ++L+FSQ L LE +M ++G+ + + +R+ S+
Sbjct: 500 LDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLM-YRGYQYCRIDGNTGGD----ERDASI 554
Query: 663 NKFNNSPDAK-IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 721
+N K +F S +A G GI+L A V++ D NP V QA RA R GQ K+V
Sbjct: 555 EAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEV 614
Query: 722 FVYRLIAADSPE 733
V+R ++ E
Sbjct: 615 QVFRFCTENAIE 626
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 214/492 (43%), Gaps = 76/492 (15%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYP--NARPLVV 317
+++ +++ G N+L+R + +N ILA G GKT IS + ++L +Y N +VV
Sbjct: 193 KLRDYQLAGLNWLIR--LYENGINGILADEMGLGKTLQTISLL-AYLHEYRGINGPHMVV 249
Query: 318 LPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSS 377
PK L W E + + P+ VK ++ +++ +L G +F
Sbjct: 250 APKSTLGNWMNEIRRF----CPV--LRAVKFLGNPEERRHIRE-----ELLVAG--KFDI 296
Query: 378 IVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTL 436
V ++ ++I + L + +I+DE H +NEN+ + +++ T +++++GT
Sbjct: 297 CV---TSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 353
Query: 437 YQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKR 496
QN++ E++ +LN + P+ S ++F + + + + D
Sbjct: 354 LQNNLHELWALLNFLLPEVF------------------SSAETFDEWFQISGEND----- 390
Query: 497 KIAVVQDLREMTSK-VLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFKV 555
+ VVQ L ++ +L K D LP + + + ++ QK L + + +V
Sbjct: 391 QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKAL--LQKDLEV 448
Query: 556 SSMGS--------ALYL-----HPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKF 602
+ G A+ L HP L A+ + D +V + K
Sbjct: 449 VNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLV---------TNAGKMVL 499
Query: 603 FMNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSM 662
+L + + ++L+FSQ L LE +M ++G+ + + +R+ S+
Sbjct: 500 LDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLM-YRGYQYCRIDGNTGGD----ERDASI 554
Query: 663 NKFNNSPDAK-IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 721
+N K +F S +A G GI+L A V++ D NP V QA RA R GQ K+V
Sbjct: 555 EAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEV 614
Query: 722 FVYRLIAADSPE 733
V+R ++ E
Sbjct: 615 QVFRFCTENAIE 626
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 198/483 (40%), Gaps = 90/483 (18%)
Query: 285 ILAHAPGSGKTFMI---ISFMQSFLGKY-PNARPLVVLPKGILSTWKKEFQTWQVEDIPL 340
ILA G GKT + I+++ F G Y P+ L+++P +L WK E TW +P
Sbjct: 1003 ILADEMGLGKTVQVMALIAYLMEFKGNYGPH---LIIVPNAVLVNWKSELHTW----LPS 1055
Query: 341 YD--FYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLKV 398
+Y D RS K FS VC N + + + I+
Sbjct: 1056 VSCIYYVGTKDQRS--------------------KLFSQEVCAMKFNVLVTTYEFIMYDR 1095
Query: 399 PSI-------LILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLV 451
+ +I+DE ++ + + + L + + R+++L+GT QN +KE++++LNL+
Sbjct: 1096 SKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLL 1155
Query: 452 RPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDP----------DFKRKIAVV 501
P +K+F+D QK+ + ++K+ V+
Sbjct: 1156 LPDVF------------------DNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVI 1197
Query: 502 QDLREMTSK-VLHYYKGDFLDELPGLVDFTVLLKLTPRQK------HETGKLKNISRKFK 554
L ++ +L D LP V + +++ Q TG L+ K
Sbjct: 1198 HRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEK 1257
Query: 555 VSSMGSALY-------LHPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFFMNIL 607
+ + + +Y L+ R + + C ++ +D + V+ K IL
Sbjct: 1258 LRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRIL 1317
Query: 608 NLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNN 667
+ + ++L+FS L LE ++W+ + + RE ++ FN+
Sbjct: 1318 IKLQRTGHRVLLFSTMTKLLDILEEY-LQWRRLVYRRIDGTTSLE----DRESAIVDFND 1372
Query: 668 SPDAK--IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYR 725
PD IF SI+A G G++L A V+I D NP QA+ RA R GQT++V V
Sbjct: 1373 -PDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIY 1431
Query: 726 LIA 728
+ A
Sbjct: 1432 MEA 1434
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/526 (22%), Positives = 222/526 (42%), Gaps = 69/526 (13%)
Query: 261 MKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPN--ARPLVVL 318
+K +++ G NFL+ L G ILA G GKT I+++ + L + N LVV
Sbjct: 213 LKPYQLVGVNFLLL-LYKKGIEGAILADEMGLGKTIQAITYL-TLLSRLNNDPGPHLVVC 270
Query: 319 PKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVECK--SILFLGYKQFS 376
P +L W++E + W + ++ + S++L L + + ++L + Y F
Sbjct: 271 PASVLENWERELRKW-CPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFE 329
Query: 377 SIVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKV--KTPRKVVLS 433
+ + +L + S +++DE H +++N+ ++L V ++++L+
Sbjct: 330 RHSEQQKDD------RKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLT 383
Query: 434 GTLYQNHVKE-----------VFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYD 482
GT QN + E +F N+ K L E + ++ R+ S I G
Sbjct: 384 GTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLNAEDTE-LITRMKS---ILGPFILRR 439
Query: 483 LVEDTLQK-DPDFKRKIAVVQDLREMTS--KVLHYYKGDFLDELPGLVDFTV--LLKLTP 537
L D +Q+ P +R V+ + ++ + + + Y+ L L ++ L K P
Sbjct: 440 LKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALP 499
Query: 538 RQKHET--GKLKNISRK----FKVSSMGSALYLHPRLIPVAD---KCGENSVSDQM---- 584
+++ + + I+ ++ S + + +L P+ +C + V +++
Sbjct: 500 KRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFN 559
Query: 585 ---VDDLIEKLDVKD------------GVKSKFFMNILNLCESSNEKLLVFSQYLLPLKY 629
+ L+ + V D K + +L + S ++L+FSQ+ L
Sbjct: 560 DFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDI 619
Query: 630 LERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAKIFFGSIKACGEGISLVG 689
LE W G R+ ++ FNN S +A G+G++L G
Sbjct: 620 LE-----WTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLTG 674
Query: 690 ASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEED 735
A V+I D+ NP + RQA R R GQTK V ++RL+ + +E+
Sbjct: 675 ADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDEN 720
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 203/477 (42%), Gaps = 79/477 (16%)
Query: 285 ILAHAPGSGKTFMI---ISFMQSFLGKY-PNARPLVVLPKGILSTWKKEFQTWQVEDIPL 340
ILA G GKT + I+++ F G Y P+ L+++P +L WK E TW +P
Sbjct: 1003 ILADEMGLGKTVQVMALIAYLMEFKGNYGPH---LIIVPNAVLVNWKSELHTW----LPS 1055
Query: 341 YD--FYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLKV 398
+Y D RS+ +K E ++L Y +F I+ D S L KV
Sbjct: 1056 VSCIYYVGTKDQRSKLFSQVK--FEKFNVLVTTY-EF--IMYDRSK----------LSKV 1100
Query: 399 P-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLR 457
+I+DE ++ + + + L + + R+++L+GT QN +KE++++LNL+ P
Sbjct: 1101 DWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVF- 1159
Query: 458 METSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDP----------DFKRKIAVVQDLREM 507
+K+F+D QK+ + ++K+ V+ L ++
Sbjct: 1160 -----------------DNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQI 1202
Query: 508 TSK-VLHYYKGDFLDELPGLVDFTVLLKLTPRQK------HETGKLKNISRKFKVSSMGS 560
+L D LP V + +++ Q TG L+ K+ + +
Sbjct: 1203 LEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKN 1262
Query: 561 ALY-------LHPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLCESS 613
+Y L+ R + + C ++ +D + V+ K IL + +
Sbjct: 1263 PIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRT 1322
Query: 614 NEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAK- 672
++L+FS L LE ++W+ + + RE ++ FN+ PD
Sbjct: 1323 GHRVLLFSTMTKLLDILEEY-LQWRRLVYRRIDGTTSLE----DRESAIVDFND-PDTDC 1376
Query: 673 -IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIA 728
IF SI+A G G++L A V+I D NP QA+ RA R GQT++V V + A
Sbjct: 1377 FIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEA 1433
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 593 DVKDGVKSKFFMNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXX 652
DVK K + ++ S +K+L+FS + L LE+ +++ KG+SF +
Sbjct: 523 DVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIR-KGYSFARLDGSTPTN 581
Query: 653 XXXXQREWSMNKFNNSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRA 712
R+ ++ FN SP ++F S KA G G++LV A+RV+I D + NPS QA R+
Sbjct: 582 L----RQSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRS 637
Query: 713 FRPGQTKKVFVYRLIAADSPEE 734
FR GQ + V V+RL++A S EE
Sbjct: 638 FRYGQKRHVVVFRLLSAGSLEE 659
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 210/500 (42%), Gaps = 76/500 (15%)
Query: 261 MKSHKIEGFNFLVRN-LVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP---LV 316
+K H++EG ++L++ L+G N + G GKT ISF+ S+L K+ P LV
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNV--VLELDQMGLGKTLQAISFL-SYL-KFRQGLPGPFLV 106
Query: 317 VLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVE--CKSIL---FLG 371
+ P + W E + + LEVL+ + C+ +
Sbjct: 107 LCPLSVTDGWVSEINRF------------------TPNLEVLRYVGDKYCRLDMRKSMYD 148
Query: 372 YKQFSSIVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSL-AKVKTPRK 429
+ F +T I++ QD L ++P I+DE +N N+ + L + PR+
Sbjct: 149 HGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRR 208
Query: 430 VVLSGTLYQNHVKEVFNILNLVRP-KFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTL 488
++++GT QN++ E++ +++ P F ++ K + +S K Y ++ L
Sbjct: 209 LLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLDVSNDKETYKSLKFIL 268
Query: 489 -------QKDPDFKRKIAVVQDLREMTSKVL------HYYKGDFLDELPGLVDFTVLLKL 535
K + V+ L E+T V Y ELPGL L+L
Sbjct: 269 GAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGL------LEL 322
Query: 536 TPRQKHETGKLKNISRKFKVSSMGSALYLHPRLIPVADKCGENSVSDQMVDDLIEKLDVK 595
+ + T L+NI + + + S YL P + P + GE+ V KL V
Sbjct: 323 SSGGSNHTS-LQNIVIQLRKAC--SHPYLFPGIEPEPFEEGEHLVQAS------GKLLVL 373
Query: 596 DGVKSKFFMNILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXX 655
D +L S ++L+FSQ L L+ M+ + +S+ +
Sbjct: 374 D--------QLLKRLHDSGHRVLLFSQMTSTLDILQDF-MELRRYSYERLDGSVRAE--- 421
Query: 656 XQREWSMNKFN-NSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFR 714
+R ++ F+ + +A +F S +A G G++LV A V+ + NP V +QA+ RA R
Sbjct: 422 -ERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHR 480
Query: 715 PGQTKKVFVYRLIAADSPEE 734
GQ V L+ S EE
Sbjct: 481 IGQISHVLSINLVTEHSVEE 500
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 230/536 (42%), Gaps = 73/536 (13%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP--LVV 317
+++ +++ G +LV +L ++ G ILA G GKT +IS + +L + N R LVV
Sbjct: 753 KLREYQMNGLRWLV-SLYNNHLNG-ILADEMGLGKTVQVISLI-CYLMETKNDRGPFLVV 809
Query: 318 LPKGILSTWKKEFQTW--QVEDIPLYDFYTVKADSRSQQLEVLKQWVECK-SILFLGYKQ 374
+P +L W+ E W + I Y D R + + +Q V K ++L Y+
Sbjct: 810 VPSSVLPGWQSEINFWAPSIHKI----VYCGTPDERRKLFK--EQIVHQKFNVLLTTYEY 863
Query: 375 FSSIVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLS 433
++ + L K+ +I+DEGH +N + + L + +++L+
Sbjct: 864 L-----------MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLT 912
Query: 434 GTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPD 493
GT QN+++E++ +LN + P +S + + +G+ S + +
Sbjct: 913 GTPLQNNLEELWALLNFLLPNIFN--SSEDFSQWFNKPFQSNGESSAEEALLSE------ 964
Query: 494 FKRKIAVVQDLREMTSK-VLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRK 552
+ + ++ L ++ VL K +ELP ++ + + + QK ++++
Sbjct: 965 -EENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVED---- 1019
Query: 553 FKVSSMGSA--LYLHPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLC 610
+ S+G+A +H ++ + + C +S + +V + + F I+ LC
Sbjct: 1020 -NLGSIGNAKSRAVHNSVMELRNICNHPYLSQ------LHSEEVNNIIPKHFLPPIVRLC 1072
Query: 611 -------------ESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQ 657
++++ ++L FS L +E + KG+ + +
Sbjct: 1073 GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDY-LTLKGYKYLR----LDGQTSGGD 1127
Query: 658 REWSMNKFNNSPDA-KIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPG 716
R ++ FN S IF SI+A G G++L A V++ D NP V QA RA R G
Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIG 1187
Query: 717 QTKKVFVYRLIAADSPEED-----DHITCFKKELISKMWFEWNEYCGDRAFQVETV 767
Q K V V R +S EE +H + I+ +F+ N DR +E++
Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLESL 1243
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 230/536 (42%), Gaps = 73/536 (13%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP--LVV 317
+++ +++ G +LV +L ++ G ILA G GKT +IS + +L + N R LVV
Sbjct: 753 KLREYQMNGLRWLV-SLYNNHLNG-ILADEMGLGKTVQVISLI-CYLMETKNDRGPFLVV 809
Query: 318 LPKGILSTWKKEFQTW--QVEDIPLYDFYTVKADSRSQQLEVLKQWVECK-SILFLGYKQ 374
+P +L W+ E W + I Y D R + + +Q V K ++L Y+
Sbjct: 810 VPSSVLPGWQSEINFWAPSIHKI----VYCGTPDERRKLFK--EQIVHQKFNVLLTTYEY 863
Query: 375 FSSIVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLS 433
++ + L K+ +I+DEGH +N + + L + +++L+
Sbjct: 864 L-----------MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLT 912
Query: 434 GTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPD 493
GT QN+++E++ +LN + P +S + + +G+ S + +
Sbjct: 913 GTPLQNNLEELWALLNFLLPNIFN--SSEDFSQWFNKPFQSNGESSAEEALLSE------ 964
Query: 494 FKRKIAVVQDLREMTSK-VLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRK 552
+ + ++ L ++ VL K +ELP ++ + + + QK ++++
Sbjct: 965 -EENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVED---- 1019
Query: 553 FKVSSMGSA--LYLHPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLC 610
+ S+G+A +H ++ + + C +S + +V + + F I+ LC
Sbjct: 1020 -NLGSIGNAKSRAVHNSVMELRNICNHPYLSQ------LHSEEVNNIIPKHFLPPIVRLC 1072
Query: 611 -------------ESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQ 657
++++ ++L FS L +E + KG+ + +
Sbjct: 1073 GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDY-LTLKGYKYLR----LDGQTSGGD 1127
Query: 658 REWSMNKFNNSPDA-KIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPG 716
R ++ FN S IF SI+A G G++L A V++ D NP V QA RA R G
Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIG 1187
Query: 717 QTKKVFVYRLIAADSPEED-----DHITCFKKELISKMWFEWNEYCGDRAFQVETV 767
Q K V V R +S EE +H + I+ +F+ N DR +E++
Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLESL 1243
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 230/536 (42%), Gaps = 73/536 (13%)
Query: 260 QMKSHKIEGFNFLVRNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARP--LVV 317
+++ +++ G +LV +L ++ G ILA G GKT +IS + +L + N R LVV
Sbjct: 753 KLREYQMNGLRWLV-SLYNNHLNG-ILADEMGLGKTVQVISLI-CYLMETKNDRGPFLVV 809
Query: 318 LPKGILSTWKKEFQTW--QVEDIPLYDFYTVKADSRSQQLEVLKQWVECK-SILFLGYKQ 374
+P +L W+ E W + I Y D R + + +Q V K ++L Y+
Sbjct: 810 VPSSVLPGWQSEINFWAPSIHKI----VYCGTPDERRKLFK--EQIVHQKFNVLLTTYEY 863
Query: 375 FSSIVCDNSTNSISISCQDILLKVP-SILILDEGHNPRNENTDMVQSLAKVKTPRKVVLS 433
++ + L K+ +I+DEGH +N + + L + +++L+
Sbjct: 864 L-----------MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLT 912
Query: 434 GTLYQNHVKEVFNILNLVRPKFLRMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPD 493
GT QN+++E++ +LN + P +S + + +G+ S + +
Sbjct: 913 GTPLQNNLEELWALLNFLLPNIFN--SSEDFSQWFNKPFQSNGESSAEEALLSE------ 964
Query: 494 FKRKIAVVQDLREMTSK-VLHYYKGDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRK 552
+ + ++ L ++ VL K +ELP ++ + + + QK ++++
Sbjct: 965 -EENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVED---- 1019
Query: 553 FKVSSMGSA--LYLHPRLIPVADKCGENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLC 610
+ S+G+A +H ++ + + C +S + +V + + F I+ LC
Sbjct: 1020 -NLGSIGNAKSRAVHNSVMELRNICNHPYLSQ------LHSEEVNNIIPKHFLPPIVRLC 1072
Query: 611 -------------ESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQ 657
++++ ++L FS L +E + KG+ + +
Sbjct: 1073 GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDY-LTLKGYKYLR----LDGQTSGGD 1127
Query: 658 REWSMNKFNNSPDA-KIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPG 716
R ++ FN S IF SI+A G G++L A V++ D NP V QA RA R G
Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIG 1187
Query: 717 QTKKVFVYRLIAADSPEED-----DHITCFKKELISKMWFEWNEYCGDRAFQVETV 767
Q K V V R +S EE +H + I+ +F+ N DR +E++
Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLESL 1243
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 613 SNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAK 672
S EK +VFSQ+ L LE + ++ +G+ F + RE + +FN +
Sbjct: 1126 SGEKSIVFSQWTSFLDLLE-IPLRRRGFEFLRFDGKLAQKG----REKVLKEFNETKQKT 1180
Query: 673 IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 732
I S+KA G G++L AS V ++D NP+V QAI R R GQ + VFV R I D+
Sbjct: 1181 ILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTV 1240
Query: 733 EE 734
EE
Sbjct: 1241 EE 1242
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 616 KLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAKIFF 675
+ L+F+Q L LE + + G+++ + +R+ M +FN +P +F
Sbjct: 1093 RALIFTQMTKMLDVLEAFINLY-GYTYMRLDGSTPPE----ERQTLMQRFNTNPKIFLFI 1147
Query: 676 GSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEED 735
S ++ G GI+LVGA V+ D NP++ +QA R R GQT++V +YRLI+ + EE+
Sbjct: 1148 LSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEEN 1207
Query: 736 DHITCFKKELISKMWFEWNEY--------------CGDRAFQV--ETVSVNECGDEFLET 779
+K ++ + + EY G +A E + CG +
Sbjct: 1208 ILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSGHKALTTKDEKETSKHCGADI--- 1264
Query: 780 PMLGEDVKALYKR 792
P+ DV+A K+
Sbjct: 1265 PLSNADVEAALKQ 1277
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 285 ILAHAPGSGKTFMIISFMQSFLGKYPNARP-LVVLPKGILSTWKKEFQTWQVEDIPLYDF 343
ILA G GKT M I+ + P L+V+P ++ W+ EF W P +
Sbjct: 558 ILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKW----CPAFKI 613
Query: 344 YTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILLKVPSILI 403
T ++ ++L+ + W++ S VC + + + K LI
Sbjct: 614 LTYFGSAKERKLK-RQGWMKLNSFH----------VCITTYRLVIQDSKMFKRKKWKYLI 662
Query: 404 LDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRP 453
LDE H +N + Q+L + R+++L+GT QN + E++++++ + P
Sbjct: 663 LDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMP 712
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 658 REWSMNKFNNSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQ 717
R+ ++NKF PD ++F S+KA G ++L AS V ++D NP+V RQA R R GQ
Sbjct: 719 RDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQ 778
Query: 718 TKKVFVYRLIAADSPEEDDHITCFKKELI 746
K + V R I ++ EE KKEL+
Sbjct: 779 YKPIRVVRFIIENTVEERILRLQKKKELV 807
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 613 SNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAK 672
+ EK +VF+Q+ L LE +K G + + R+ ++ FN PD
Sbjct: 1113 AGEKAIVFTQWTKMLDLLE-AGLKSSGIQYRRFDGKMTVPA----RDAAVQDFNTLPDVS 1167
Query: 673 IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 732
+ S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V V R D+
Sbjct: 1168 VMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTV 1227
Query: 733 EE 734
E+
Sbjct: 1228 ED 1229
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 613 SNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAK 672
+ EK +VF+Q+ L LE +K G + + R+ ++ FN PD
Sbjct: 1070 AGEKAIVFTQWTKMLDLLE-AGLKSSGIQYRRFDGKMTVPA----RDAAVQDFNTLPDVS 1124
Query: 673 IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 732
+ S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V V R D+
Sbjct: 1125 VMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTV 1184
Query: 733 EE 734
E+
Sbjct: 1185 ED 1186
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 616 KLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAKIFF 675
K ++FSQ+ L +E +++ G F + R+ ++ +F+ PD K+
Sbjct: 894 KTIIFSQWTGMLDLVELRILE-SGIEFRRLDGTMSLAA----RDRAVKEFSKKPDVKVML 948
Query: 676 GSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEE 734
S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V V R+ D+ E+
Sbjct: 949 MSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVED 1007
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 613 SNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAK 672
+ EK +VFSQ+ L LE ++ S R+ ++ FN P+
Sbjct: 1122 AGEKAIVFSQWTKMLNLLEASLV-----SSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT 1176
Query: 673 IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 732
+ S+KA G+++V A VL+LD+ NP+ QAI RA R GQT+ V V R D+
Sbjct: 1177 VMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTV 1236
Query: 733 EE 734
E+
Sbjct: 1237 ED 1238
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 613 SNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDAK 672
+ EK +VFSQ+ L LE ++ S R+ ++ FN P+
Sbjct: 964 AGEKAIVFSQWTKMLNLLEASLV-----SSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT 1018
Query: 673 IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 732
+ S+KA G+++V A VL+LD+ NP+ QAI RA R GQT+ V V R D+
Sbjct: 1019 VMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTV 1078
Query: 733 EE 734
E+
Sbjct: 1079 ED 1080
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 658 REWSMNKFNNSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQ 717
R+ ++ +F+N PD K+ S+KA G++++ A V++LD+ NP+ QAI RA R GQ
Sbjct: 865 RDRAVKEFSNDPDVKVMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQ 924
Query: 718 TKKVFVYRLIAADSPEEDDHITCFKKE 744
T+ V V R+ ++ E D I ++E
Sbjct: 925 TRPVTVTRITIKNTVE--DRILALQEE 949
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 611 ESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPD 670
E+ N K +VFSQ+ L LE +K G++ + +R + +F N P+
Sbjct: 703 ENPNTKSVVFSQFRKMLLLLE-TPLKAAGFTILRLDGAMTVK----KRTQVIGEFGN-PE 756
Query: 671 AK---IFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLI 727
+ S+KA G GI+L ASRV + D NP+V QA+ R R GQ ++V + R+I
Sbjct: 757 LTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMI 816
Query: 728 AADSPEEDDHITCFKKELISKMWFEWNEYCGDRAFQVETV 767
A +S EE KK+ ++ F+ + +R VE V
Sbjct: 817 ARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDV 856
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 606 ILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKF 665
+L + N ++L+F+Q L LE M ++ + + + R + F
Sbjct: 1214 LLKRLRAGNHRVLLFAQMTKMLNILED-YMNYRKYKYLRLDGSSTIM----DRRDMVRDF 1268
Query: 666 NNSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYR 725
+ D +F S +A G GI+L A V+ + NP++ QA+ RA R GQTK V VYR
Sbjct: 1269 QHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYR 1328
Query: 726 LIAADSPEEDDHITCFKKELISKMWFEWNEYCGD 759
LI ++ EE +K + ++ GD
Sbjct: 1329 LICKETVEEKILHRASQKNTVQQLVMTGGHVQGD 1362
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 606 ILNLCESSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKF 665
+L + N ++L+F+Q L LE M ++ + + + R + F
Sbjct: 1247 LLKRLRAGNHRVLLFAQMTKMLNILED-YMNYRKYKYLRLDGSSTIM----DRRDMVRDF 1301
Query: 666 NNSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYR 725
+ D +F S +A G GI+L A V+ + NP++ QA+ RA R GQTK V VYR
Sbjct: 1302 QHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYR 1361
Query: 726 LIAADSPEEDDHITCFKKELISKMWFEWNEYCGD 759
LI ++ EE +K + ++ GD
Sbjct: 1362 LICKETVEEKILHRASQKNTVQQLVMTGGHVQGD 1395
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 612 SSNEKLLVFSQYLLPLKYLERLVMKWKGWSFGKXXXXXXXXXXXXQREWSMNKFNNSPDA 671
SS K ++FSQ+ L L+ + + +SF + QRE + +F+
Sbjct: 877 SSGSKSILFSQWTAFLDLLQ-IPLSRNNFSFVRLDGTLSQQ----QREKVLKEFSEDGSI 931
Query: 672 KIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADS 731
+ S+KA G GI+L AS ++D NP+V QA+ R R GQTK+V + R I +
Sbjct: 932 LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGT 991
Query: 732 PEED-DHITCFKKELIS 747
EE + + K+ +IS
Sbjct: 992 VEERMEAVQARKQRMIS 1008
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 658 REWSMNKFNNSPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQ 717
++ ++ F PD ++ S++A G ++L AS V ++D NP+V RQA R R GQ
Sbjct: 564 KDAALKNFKEEPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQ 623
Query: 718 TKKVFVYRLIAADSPEE 734
K V V R I + EE
Sbjct: 624 CKPVRVVRFIMEKTVEE 640
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 657 QREWSMNKFNN-SPDAKIFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRP 715
Q S NK N+ S S+KA G+++V AS V++LD+ NP+ QAI RA R
Sbjct: 492 QSRHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRI 551
Query: 716 GQTKKVFVYRLIAADSPEEDDHITCF---KKELISKMWFE--WNEYCGDRAFQVETVSVN 770
GQT+ V V R+ ++ EE I K+ +++ E W ++C + +SV
Sbjct: 552 GQTRAVTVTRIAIKNTVEE--RILTLHERKRNIVASALGEKNWQKFCDSTNTRRSRISVF 609
Query: 771 EC 772
C
Sbjct: 610 WC 611