Miyakogusa Predicted Gene
- Lj5g3v2045180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2045180.1 Non Chatacterized Hit- tr|I1LVC4|I1LVC4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26386
PE,79.07,0,SNF2_N,SNF2-related; Helicase_C,Helicase, C-terminal;
seg,NULL; DEAD-like helicases superfamily,Heli,CUFF.56512.1
(2379 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78397 similar to UniRef100_A7P7U3 Cluster: Chromosome... 1061 0.0
gnl|LJGI|BW594572 similar to UniRef100_A7NXX0 Cluster: Chromosom... 839 0.0
gnl|LJGI|TC71927 similar to UniRef100_A7NXX0 Cluster: Chromosome... 515 e-145
gnl|LJGI|TC81005 similar to UniRef100_A7NXX0 Cluster: Chromosome... 430 e-119
gnl|LJGI|TC78700 similar to UniRef100_A7P7U3 Cluster: Chromosome... 416 e-115
gnl|LJGI|FS325119 389 e-107
gnl|LJGI|DC597582 381 e-104
gnl|LJGI|BP062500 343 3e-93
gnl|LJGI|FS324356 107 3e-22
>gnl|LJGI|TC78397 similar to UniRef100_A7P7U3 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 925
Score = 1061 bits (535), Expect = 0.0
Identities = 580/595 (97%)
Strand = Plus / Plus
Query: 1785 agatggagtgaagtcgaaattctttatgaacattctaaacttgtgtgaatcatccaacga 1844
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 5 agatggagtgaagtcgaaattcttcatgaacattctaaacttgtgtgattcatccaacga 64
Query: 1845 gaagcttctagtgttcagccaatatctcttacctttgaaatatttagagaggttagttat 1904
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gaagcttctggtgttcagccaatatctcttacctttgaaatatttagagaggttagttat 124
Query: 1905 gaaatggaaaggttggagttttgggaaagaaatcttcggaatctcaggggaatctagctc 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gaaatggaaaggttggagttttgggaaagaaatcttcggaatctcaggggaatctagctc 184
Query: 1965 tgagcaaagggagtggtccatgaacaaattcaacaattcgcctgatgctaaaatcttctt 2024
|||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||
Sbjct: 185 tgagcaaagggagtggtccatgaataaattcaacaattcaccggatgctaaaattttctt 244
Query: 2025 tggctcaatcaaggcttgtggagagggcatatcattggttggggcatcccgagtactcat 2084
||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 245 tggttcaatcaaggcttgtggagagggtatatctttggttggggcatcccgagtacttat 304
Query: 2085 tttggatgttcatctgaacccatcagttactcgtcaagctattggtcgtgcattccgacc 2144
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 305 tttggatgttcatctgaacccgtcagttactcgtcaagctattggtcgtgcatttcgacc 364
Query: 2145 aggacagacaaagaaggtctttgtgtatcgattgatagctgctgattctccggaagagga 2204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aggacagacaaagaaggtctttgtgtatcgattgatagctgctgattctccggaagagga 424
Query: 2205 cgatcacattacttgtttcaagaaggaattgatttcaaagatgtggtttgagtggaatga 2264
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgatcacattacttgtttcaagaaggaattgatttcaaagatgtggtttgagtggaatga 484
Query: 2265 gtactgtggtgatagagccttccaagttgagaccgttagtgtcaatgaatgtggtgatga 2324
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtactgtggtgatagggccttccaagttgagaccgttagtgtcaatgaatgtggtgatga 544
Query: 2325 gttccttgagactccaatgttaggagaagatgtaaaagctttgtataaaaggtaa 2379
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gttccttgagactccaatgttaggagaagatgtaaaagctttgtataaaaggtaa 599
>gnl|LJGI|BW594572 similar to UniRef100_A7NXX0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (21%)
Length = 459
Score = 839 bits (423), Expect = 0.0
Identities = 450/459 (98%)
Strand = Plus / Plus
Query: 740 tgtttactgaaatttcagcacatcctaggcatatgaagcaaatgaagtctcataaaattg 799
||||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||||
Sbjct: 1 tgtttactgaaatttcagcacatcccatacatatgaaacaaatgaagtctcatcaaattg 60
Query: 800 aagggttcaattttctcgtcagaaacctcgtaggtgacaatcctgggggctgcatcttgg 859
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 aagggttcaattttctcgtcagaaaccttgtaggtgacaatcctgggggctgcatcttgg 120
Query: 860 cccatgctccaggatctgggaagacattcatgataatcagtttcatgcagagttttctag 919
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 121 cccatgctccaggatctgggaagacattcatgataatcagcttcatgcaaagttttctag 180
Query: 920 gaaagtacccaaatgctagacctctggtggtgcttcccaagggaatactatctacttgga 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaagtacccaaatgctagacctctggtggtgcttcccaagggaatactatctacttgga 240
Query: 980 aaaaggagtttcagacatggcaagtggaggacataccactttacgatttttacactgtga 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaaggagtttcagacatggcaagtggaggacataccactttacgatttttacactgtga 300
Query: 1040 aggcagacagtagatcacagcagttggaagttttgaaacaatgggtggaatgcaagagca 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggcagacagtagatcacagcagttggaagttttgaaacaatgggtggaatgcaagagca 360
Query: 1100 tccttttcttgggctacaagcagttctcttcaattgtctgtgataatagtactaacagca 1159
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccttttcttggggtacaagcagttctcttcaattgtctgtgataatagtactaacagca 420
Query: 1160 tatcaatatcttgccaagatatattgcttaaggtacctt 1198
|||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcaatatcttgccaagatatattgcttaaggtacctt 459
>gnl|LJGI|TC71927 similar to UniRef100_A7NXX0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (15%)
Length = 588
Score = 515 bits (260), Expect = e-145
Identities = 278/284 (97%)
Strand = Plus / Plus
Query: 2095 catctgaacccatcagttactcgtcaagctattggtcgtgcattccgaccaggacagaca 2154
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 catctgaatccatcagttactcgtcaagctattggccgtgcattccgaccaggacagaca 60
Query: 2155 aagaaggtctttgtgtatcgattgatagctgctgattctccggaagaggacgatcacatt 2214
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 61 aagaaggtctttgtgtatcgattgatagctgctgactctccagaagaggacgatcacatt 120
Query: 2215 acttgtttcaagaaggaattgatttcaaagatgtggtttgagtggaatgagtactgtggt 2274
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 acttgtttcaagaaggaattgatttcaaagatgtggtttgaatggaatgagtactgtggt 180
Query: 2275 gatagagccttccaagttgagaccgttagtgtcaatgaatgtggtgatgagttccttgag 2334
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatagagccttccaagttgagactgttagtgtcaatgaatgtggtgatgagttccttgag 240
Query: 2335 actccaatgttaggagaagatgtaaaagctttgtataaaaggta 2378
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actccaatgttaggagaagatgtaaaagctttgtataaaaggta 284
>gnl|LJGI|TC81005 similar to UniRef100_A7NXX0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 715
Score = 430 bits (217), Expect = e-119
Identities = 316/349 (90%)
Strand = Plus / Plus
Query: 2030 caatcaaggcttgtggagagggcatatcattggttggggcatcccgagtactcattttgg 2089
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 1 caatcaaggcttgtggagagggcatatccttggttggggcatcccgagtacttgttttgg 60
Query: 2090 atgttcatctgaacccatcagttactcgtcaagctattggtcgtgcattccgaccaggac 2149
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 61 atgttcatctgaacccatcagttactcgtcaagctattggccgtgcattccgaccagggc 120
Query: 2150 agacaaagaaggtctttgtgtatcgattgatagctgctgattctccggaagaggacgatc 2209
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 121 agacaaagaaggtctttgtgtatcgattgatagctgctgattctcacgaagaggatgatc 180
Query: 2210 acattacttgtttcaagaaggaattgatttcaaagatgtggtttgagtggaatgagtact 2269
|| | ||||||||||||||||||| ||||| |||||||||||||| ||||||||||| |
Sbjct: 181 acctgacttgtttcaagaaggaatcaatttctaagatgtggtttgaatggaatgagtatt 240
Query: 2270 gtggtgatagagccttccaagttgagaccgttagtgtcaatgaatgtggtgatgagttcc 2329
|||||||| ||| ||| | ||||||| ||| ||||| || |||||||||||| |||||
Sbjct: 241 gtggtgatcaagctttcaaggttgagaacgtcagtgtgaaagaatgtggtgatctgttcc 300
Query: 2330 ttgagactccaatgttaggagaagatgtaaaagctttgtataaaaggta 2378
|||||| | | |||||||||||||| ||| ||||| | |||||||||||
Sbjct: 301 ttgagagttcgatgttaggagaagacgtacaagctctatataaaaggta 349
>gnl|LJGI|TC78700 similar to UniRef100_A7P7U3 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 533
Score = 416 bits (210), Expect = e-115
Identities = 216/218 (99%)
Strand = Plus / Plus
Query: 2161 gtctttgtgtatcgattgatagctgctgattctccggaagaggacgatcacattacttgt 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctttgtgtatcgattgatagctgctgattctccggaagaggacgatcacattacttgt 60
Query: 2221 ttcaagaaggaattgatttcaaagatgtggtttgagtggaatgagtactgtggtgataga 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcaagaaggaattgatttcaaagatgtggtttgagtggaatgagtactgtggtgataga 120
Query: 2281 gccttccaagttgagaccgttagtgtcaatgaatgtggtgatgagttccttgagactcca 2340
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccttccaagtagagactgttagtgtcaatgaatgtggtgatgagttccttgagactcca 180
Query: 2341 atgttaggagaagatgtaaaagctttgtataaaaggta 2378
||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgttaggagaagatgtaaaagctttgtataaaaggta 218
>gnl|LJGI|FS325119
Length = 639
Score = 389 bits (196), Expect = e-107
Identities = 220/228 (96%)
Strand = Plus / Plus
Query: 1 atgcaagtactgggccctttctttgcaaagtttcctaaacttgttactcaatcattaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atgcaagtactgggccctttctttgcaaagtttcctaaacttgttactcaatcattaaac 471
Query: 61 gtggttgtgaaccacgatgaagaaagtaataagttggaaaataaaaaaggcaccatcatg 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtggttgtgaaccacaatgaagaaagtaataagttggaaaataaaaaaggcaccatcatg 531
Query: 121 tcacatgataaagtaatagatttggaagaggagcgcactaaaaaggatgcttcttcagca 180
||||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||||
Sbjct: 532 tcacatgataaagtagtagatttggaagaggagcacactaagaaggatgcttctgcagca 591
Query: 181 caggctgttgtgattattgattcggatgaggaagatgatagggacaaa 228
||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 592 cagcctgttgtgattattgattcggatgaggaagatgatagagacaaa 639
>gnl|LJGI|DC597582
Length = 517
Score = 381 bits (192), Expect = e-104
Identities = 210/216 (97%)
Strand = Plus / Plus
Query: 1 atgcaagtactgggccctttctttgcaaagtttcctaaacttgttactcaatcattaaaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 302 atgcaagtactgggccctttctttgcaaaatttcctaaacttgttactcaatcattaaaa 361
Query: 61 gtggttgtgaaccacgatgaagaaagtaataagttggaaaataaaaaaggcaccatcatg 120
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 362 gtggttgtgaaccacggtgaagaaagtaataagttggaaaataaaaaaggtaccatcatg 421
Query: 121 tcacatgataaagtaatagatttggaagaggagcgcactaaaaaggatgcttcttcagca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 422 tcacatgataaagtaatagatttggaagaggagcgcactaaaaaggatgcttctgcagta 481
Query: 181 caggctgttgtgattattgattcggatgaggaagat 216
||| ||||||||||||||||||||||||||||||||
Sbjct: 482 cagcctgttgtgattattgattcggatgaggaagat 517
>gnl|LJGI|BP062500
Length = 560
Score = 343 bits (173), Expect = 3e-93
Identities = 209/221 (94%)
Strand = Plus / Plus
Query: 1 atgcaagtactgggccctttctttgcaaagtttcctaaacttgttactcaatcattaaaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 335 atgcaagtactgggccctttctttgcaaaatttcctaaacttgttactcaatcattaaaa 394
Query: 61 gtggttgtgaaccacgatgaagaaagtaataagttggaaaataaaaaaggcaccatcatg 120
|||||||||||||||||||||||||||||||||| ||||||| |||| || ||| |||||
Sbjct: 395 gtggttgtgaaccacgatgaagaaagtaataagtgggaaaatgaaaagggtaccgtcatg 454
Query: 121 tcacatgataaagtaatagatttggaagaggagcgcactaaaaaggatgcttcttcagca 180
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 455 tcacatgatgaagtaatagatttggaagaggagcgcactaaaaaggatgcttctgcagca 514
Query: 181 caggctgttgtgattattgattcggatgaggaagatgatag 221
||| ||| ||||| ||||||||||||||||||||||||||
Sbjct: 515 cagcttgtcgtgatcattgattcggatgaggaagatgatag 555
>gnl|LJGI|FS324356
Length = 474
Score = 107 bits (54), Expect = 3e-22
Identities = 159/194 (81%)
Strand = Plus / Plus
Query: 1 atgcaagtactgggccctttctttgcaaagtttcctaaacttgttactcaatcattaaaa 60
||||| || ||||||||||||||||||| ||||| |||||||| |||||| ||| |||
Sbjct: 281 atgcacgtgctgggccctttctttgcaagatttcccaaacttgtaactcaagaattgaaa 340
Query: 61 gtggttgtgaaccacgatgaagaaagtaataagttggaaaataaaaaaggcaccatcatg 120
|| | ||| | | ||||||||||| | |||||||||||| |||||||| | | | |||
Sbjct: 341 gtagcagtggatcgcgatgaagaaattgttaagttggaaaacaaaaaaggtatcgttatg 400
Query: 121 tcacatgataaagtaatagatttggaagaggagcgcactaaaaaggatgcttcttcagca 180
||||| || || || ||||||||| |||| |||| || ||||||||||||| || |||||
Sbjct: 401 tcacaagaaaaggtcatagatttgaaagaagagcacattaaaaaggatgctactgcagca 460
Query: 181 caggctgttgtgat 194
||| |||||||||
Sbjct: 461 cagcatgttgtgat 474