Miyakogusa Predicted Gene

Lj5g3v1415420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LE47_SOYBN 224 59.3 74.2 (tr|K7LE47) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12300.1 144 37.7 58.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:4184163-4186076 REVERSE LENGTH=637
Medicago Medtr3g054110.1 258 67.2 77.2 | pentatricopeptide (PPR) repeat protein | HC | chr3:21460323-21462352 | 20130731
Soybean Glyma01g07140.1 207 51.7 70.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1415420.1 length: 214 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 1e-11 133-182
HMMTigr TIGR00756 PPR: 4.8e-08 137-169
171-205
ProfileScan PS51375 PPR 11.060 29-63
64-98
99-133
134-168
169-203
no_ID  
HMMPanther PTHR24015 FAMILY 3.1e-40 2-214
HMMPanther PTHR24015:SF0 SUBFAMILY 3.1e-40 2-214
Seg seg seg NA 12-34
Wolf-PSORT
Lj5g3v1415420.1	chlo 10, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1415420.1