Miyakogusa Predicted Gene
- Lj5g3v1415420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1415420.1 tr|B9MZG3|B9MZG3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595453 PE=4
SV=1,27.96,4e-19,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR_2,Pentatricopepti,CUFF.55228.1
(214 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 4e-35
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 144 4e-35
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 7e-35
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 4e-34
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 4e-32
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 5e-31
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 5e-30
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 7e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 9e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 1e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 1e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-28
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 122 2e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 2e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 3e-27
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 7e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 2e-26
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 8e-26
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 8e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 1e-24
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 1e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 2e-23
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 7e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 1e-21
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 91 7e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 3e-18
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 7e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 7e-18
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 9e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 4e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 1e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 83 1e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 82 2e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 4e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 4e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 8e-16
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 5e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 9e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 8e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 74 8e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 1e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 1e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 72 3e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 4e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 5e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 5e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 6e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 6e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 71 6e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 7e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-13
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 9e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 4e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 4e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 8e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 67 9e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 1e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 67 1e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 1e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 66 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 3e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 65 3e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 4e-11
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 65 5e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 7e-11
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 64 8e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 3e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 4e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 5e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 5e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 6e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 61 6e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 59 2e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 4e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 57 1e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 4e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 9e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 53 1e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 1e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 1e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 49 2e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 48 5e-06
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 6e-06
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ F M+ + P P V DF+ LF+ +A+TK Y ++L K+ G+A ++YTL+I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
INC C R+ S +G + K G P T T +T++NGLCLE V+ A+ M G+
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+P+ T ++NG C G A+L + MVE C+PNAV Y +++
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 66/168 (39%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D M+ P V F+ L + A L K G+APD T +
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C ++ L+ G P T N ++NG C N + + R M G
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ T+ +I GFC++G A + MV R PN V Y ++DG
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +M+ P + N+L + + A A+ LI + G P+ T V+N
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+C +TA + +L + + ++ + I++GLC ++ +A ME G
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N T+ +I GFC G + +R+M++R PN V ++ ++D
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S L A +M+ P + SL + H A ++ S G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T NI+IN C R GL + + G+ T T NT++ G C + A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + PN T+ +++G C G++E A+ + + E + +YN I+ G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F++L + + A+ L+ R G PD+ T+N ++N LC + A + ++ +
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G +P T ++N +C A A+ R ME + ++ + II+G CK G +
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A M + N + YN ++ G
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGG 307
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A +L G+ +I T NI+I C+ R G +L + K + P T + +++
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
E + A + M + G P++ T+ ++I+GFCK + A + MV + C+P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 204 NAVVYNAIMDG 214
N +N +++G
Sbjct: 402 NIRTFNILING 412
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +D + F +M +N+L A L + S
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+I T I+++ LC + L + + K+ + N I++G+C + V A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G +P T+ +I G CK G A L R M E P+ YN ++
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 144 bits (363), Expect = 4e-35, Method: Composition-based stats.
Identities = 68/167 (40%), Positives = 99/167 (59%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+A F +M+ + P P + DF+ F+ +ARTK + + K+ +G+A +IYTLNI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
INC C +T F SVLG V K G P T T NT++ GL LE V+ AV M G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
QP+ T+ +I+NG C+ GDT A+ +R M ER+ + + Y+ I+D
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Score = 83.6 bits (205), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 77/151 (50%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P FN+L + + A+ L+ R +G PD+ T N ++N +C T+ L +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + ++ T +TI++ LC + + +A++ + ME G + + T+ +++ G CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G L +++MV R PN + +N ++D
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 76/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV +M+ P V +NS+ + R+ + A+ L+++ V D++T + +I+
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC +S+ + G++ + T N++V GLC + M + P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF +++ F K G + A + M+ R PN + YN +MDG
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 71/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M++ P V FN L + A L K + G++P+I T N +++ C R
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ ++L L+ + P T +++ G C+ V + R++ G N+ T+
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ GFC+ G + A + MV P+ + Y ++DG
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A + +M+ P + +N+L + A +++ + +PDI T
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C ++R G+ V + K GL T + +V G C + A + M + G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+G +++G C G E A+ ++ + + V+Y I++G
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 57/129 (44%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A L + S GV PD+ T I+++ LC + L + + K+ + TI+
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G+C V A + G +PN T+ +I+G CK G A + +R M E P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 204 NAVVYNAIM 212
N YN ++
Sbjct: 542 NDCTYNTLI 550
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 143 bits (361), Expect = 7e-35, Method: Composition-based stats.
Identities = 65/167 (38%), Positives = 95/167 (56%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D AV F M+ + P P V DFN LF+ +A+TK Y ++L K+ S G+A IYTL+I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
INC C R+ ++ S +G + K G P T NT++NGLCLE V+ A+ M G+
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+P T ++NG C G AV+ + MVE +PN V Y +++
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 70/168 (41%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D M+ P V F+ L + A L+K G+AP+ T N +
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C R + ++ L+ G P T N ++NG C N + + R M G
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ ++ GFC+ G E A + MV R P+ V Y ++DG
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 84/178 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + + A+ +M+ P + N+L + + A+ LI R +G
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+ T V+N +C +TA + +L + + ++ + I++GLC + ++ +A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
ME G++ + T+ +I GFC G + +R+M++R PN V ++ ++D
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A +L G DI T N +I C+ R G +L + K + P T + +++
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
E + A + M G PN+ T+ ++I+GFCK E A+ + M+ + C+P
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 204 NAVVYNAIMDG 214
+ + +N +++G
Sbjct: 402 DIMTFNILING 412
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S L A +M+ P +NSL + AI ++ S G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T NI+IN C R GL + + G+ T T NT+V G C + A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + +P+ ++ +++G C G+ E A+ + + E + +Y I+ G
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 80/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + L A + +++ P FN+L + + A+ L+ R G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P + TLN ++N LC + + + ++ + +TG +P T ++N +C A A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R ME + ++ + II+G CK G ++A M + + + + YN ++ G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Score = 48.1 bits (113), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 69/177 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +D + F +M +N+L ++ A L + S
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PDI + I+++ LC L + G + K+ + I++G+C + V A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G + ++ + +I+ C+ A + R M E P+ + YN ++
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D AV F +M + P P + DF+ LF+ VARTK Y + L K+ G+A ++YTL+I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
INC C R+ + S +G + K G P T T +T++NGLCLE V+ A+ M G+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P T A++NG C G AVL + MVE +PN V Y ++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D M+ P V F++L + A L K G++PD T +
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C + +L L+ G P T N ++NG C N + + R M G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ T+ +I GFC++G E A + MV R P+ V Y ++DG
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +M+ P + N+L + + A+ LI R +G P+ T V+
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+C +TA + +L + + ++ + I++GLC + ++ +A ME G++
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + +I GFC G + +R+M++R P+ V ++A++D
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 68/177 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +D + F +M +N+L A L + S
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PDI + I+++ LC L + + K+ + N I++G+C + V A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G +P+ T+ +I G CK G A L R M E PN YN ++
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ L L+ A F +M++ P + + L + A+ + ++ S
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ DI NI+I+ +C+ + + + G++P T N ++ GLC + +++ A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGD-TESAVL 191
R ME G+ PN T+ +I GD T+SA L
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 69/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A +M+ P + SL + A ++ S G P+I T NI
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN C GL + + G+ T T NT++ G C + A + M +
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ ++ +++G C G+ E A+ + + E + +YN I+ G
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A +L G DI +I C+ R G +L + K + P + +++
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
E + A + M G P++ T+ ++I+GFCK + A + MV + C P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 204 NAVVYNAIMDG 214
N +N +++G
Sbjct: 386 NIRTFNILING 396
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 65/169 (38%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A M++ P ++ FN L + + L ++ GV D T N
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C L + + + +RP + +++GLC A+ +E +
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + + II+G C + A ++ + +P+ YN ++ G
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
Query: 38 NSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA 97
N++ LK LD AV F +M+ + PFP + +F+ L + +A+ K + IS ++ GV+
Sbjct: 39 NALLHLK-LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
++YT NI+INCLC + +F L++LG + K G P+ TLN+++NG C N ++ AV
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GYQP++ TF +++G + AV + MV + C+P+ V Y A+++G
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + AVA QM+ P F +L + + + A++L++R G
Sbjct: 141 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T VIN LC L++L + K + +T+++ LC +V A+
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+N G +P+ +T+ ++I+ C G A + +M+ER PN V +N+++D
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A ML P V FNSL A+ A L + P+I T N +IN
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R + L+ P T NT++NG C V + R M G
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ +I+GF + D ++A + + MV PN + YN ++DG
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ ++M V ++++ + + +H A++L + G+ PD++T + +
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+CLC+ R + +L + + + P T N++++ E + A M
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ ++INGFC + A MV + C P+ V YN +++G
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ L A F +M+ + P + +NSL A + S
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T N +IN C ++ G+ + + + GL T T T+++G ++ +A
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G PN T+ +++G CK G E A++ + + EP+ YN + +G
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F QM++ P + +N+L + + A+ + + S + PDIYT NI+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+C + G + + G++P NT+++G C + A T M+ G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+S T+ +I + GD ++ ++ M +A Y + D
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 71/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + P V +N+L + K + L + G+ + T
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ V + G+ P T NT+++GLC + A+ +++ +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ YT+ + G CK G E ++ + +P+ + YN ++ G
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 1/175 (0%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
+R +K L+ A+ F M+ + PFP + DFN L + + + K Y ISL K+ G+ D
Sbjct: 61 LRDIK-LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+YT NIVINC C + + LS+LG + K G P T+ ++VNG C N V+ AV+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GY+P+ + AII+ CK A + + + PN V Y A+++G
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ +ML P SL R + A+SL+ + G PDI N +I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC +R + + G+RP T +VNGLC + + A M P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N T+ A+++ F K G A MV +P+ V Y+++++G
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
+++ K L+A F +M+ + P + ++SL + A + S G D
Sbjct: 271 VKNGKVLEAK-ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+ + N +IN C +R G+ + + + GL T T NT++ G +V A F
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ G P+ +T+ ++ G C G+ E A++ +M +R + + V Y ++ G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV+ +M+ P + +N++ + +TK A K G+ P++ T ++N
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC+ R + +L + K + P T + +++ V A M P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ ++ING C + A MV + C + V YN +++G
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 63/166 (37%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ P V +++L + A L + + PDI T + +IN
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R + L+ G + NT++NG C V + R M G
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ +I GF + GD + A M P+ YN ++ G
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 59/149 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K ++ + F +M +N+L + A + G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PDI+T NI++ LC L + + K + T T++ G+C V A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ + G +P+ T+ +++G C G
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L N I +K DA + F M+ + P P DFN L + VARTK Y + K +
Sbjct: 41 RLRNGIVDIKVNDA-IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ D+YT+ I+INC C ++ F SVLG +K G P T T +T+VNG CLE V+ A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
V M +P+ T +ING C G A++ + MVE +P+ V Y +++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 69/168 (41%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D +M+ N P V F++L + A L + G+APD T N +
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C + L+ G P T + ++N C V + R + + G
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ T+ ++ GFC+ G +A + MV R P+ V Y ++DG
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+NS K +D + F ++ + P +N+L ++ AA L + S G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P + T I+++ LC L + + K+ + N I++G+C + V A
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + + G +P+ T+ +I G CK G A + R M E C P+ YN ++
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 1/175 (0%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
++ K L+A +++M+ P +NSL + A + S G PD
Sbjct: 326 VKEGKLLEAK-ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
I T +I+IN C +R G+ + + GL P T T NT+V G C + +A +
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G P+ T+G +++G C G+ A+ M + +YN I+ G
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AVA +M+ P + ++L + + A+ LI R G PD T V+N
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC +A L + + + ++ + + +++ LC + + A++ ME G +
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ T+ ++I G C G + +R M+ R+ P+ V ++A++D
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F++L + A++L+ R PD+ T++ +IN LC R + L ++ +
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G +P T ++N LC N A A+ R ME + + + +I+ CK G +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ M + + + V Y++++ G
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGG 289
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ F +M N V ++ + + + + A+SL G+ D+ T + +I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC+ + G +L + + P T + +++ E + A M G P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ T+ ++I+GFCK A MV + CEP+ V Y+ +++
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +M+ P + + + ++ + A A+ L ++ + + +IVI+
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC LS+ + G++ T ++++ GLC + R M P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ TF A+I+ F K G A M+ R P+ + YN+++DG
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N + S+K LD A+ F M+ + P P + +FN L + +A+ K + ISL ++ G
Sbjct: 57 LRNGLHSMK-LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ ++YT NI+INC C + + L++LG + K G P+ TL++++NG C ++ AV
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GY+P++ TF +I+G AV + MV+R C+PN V Y +++G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +D A ++M AA V ++++ + + +H A++L + G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++ T + +I+CLC+ R + +L + + + P T N +++ E + A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M P+ +T+ ++INGFC + A M+ + C PN V YN +++G
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN K + AVA QM+ P F +L + + A++L+ R G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ T +V+N LC ++L + + +T+++ LC + A+
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
MEN G +PN T+ ++I+ C A + +M+ER PN V +NA++D
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ P V FN+L + A L + PDI+T + +IN
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R + L+ P T NT++NG C + V R M G
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ +I+GF + D ++A + + MV PN + YN ++DG
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + FP V +N+L + K + L + G+ + T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ R V + G+ P T NT+++GLC + A+ +++ +
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P YT+ +I G CK G E ++ + +P+ ++YN ++ G
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K +D V F +M + +L + + A + K+ S G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+I T N +++ LC + + V + ++ + PT T N ++ G+C V
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
+ G +P+ + +I+GFC+ G E A R M E P++
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AVA +M+ P + + + + + A +L+ + ++ + ++ + VI+
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R L++ + G+RP T +++++ LC + A M P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF A+I+ F K G A M++R +P+ Y+++++G
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F QM++ P + +N+L + + A+ + + S + P IYT NI+
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I +C + G + + G++P NT+++G C + A R M G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 167 QPNSYT 172
P+S T
Sbjct: 572 LPDSGT 577
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 102/178 (57%), Gaps = 1/178 (0%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
+N + LK LD AV F M+ + PFP + +F+ L + +A+ + ISL ++ + G+
Sbjct: 54 INRLNDLK-LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
+ ++YT +I+INC C + + L+VL + K G P TLN+++NG C N ++ AV+
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GYQP+S+TF +I+G + AV + MV + C+P+ V Y +++G
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + AV+ QM+ P FN+L + R + A++L+ R G
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T IV+N LC LS+L + + + P NTI++ LC NV A+
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+N G +PN T+ ++I C G A + +M+ER PN V ++A++D
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A++ +M P V +N++ + K+ A++L + G+ P++ T N
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I CLC+ R + +L + + + P T + +++ E + A M
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +T+ ++INGFC + A M+ + C PN V YN ++ G
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + FP V +N+L + K + L + G+ + T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ R V + G+ P T + +++GLC V +A+ +++ +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ YT+ +I G CK G E ++ + +PN V Y +M G
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F QM++ P + ++ L + A+ + + S + PDIYT NI+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I +C + G + + G++P T T+++G C + A R M+ G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
P+S T+ +I + GD ++ +R M R C
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREM--RSC 600
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ P V F++L + A L + PDI+T + +IN
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R + L+ P T NT++ G C V + R M G
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ +I+GF + + ++A + + MV P+ + Y+ ++DG
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 98/179 (54%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N + + +D AV F M+ + PFP + +FN L + VA+ + ISL ++ + G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ D+YT +I INC C + + L+VL + K G P TL++++NG C ++ AV
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GY+P+++TF +I+G AV + MV+R C+P+ V Y +++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN K + AVA QM+ P F +L + + A++L+ + G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T V+N LC LS+L + K + NTI++GLC ++ A+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+N G +P+ +T+ ++I+ C G A + +M+ER PN V ++A++D
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A++ +M V +N++ + + KH A++L + G+ PD++T +
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+CLC+ R + +L + + + P T + +++ E + A M
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +T+ ++INGFC + A M+ + C PN V Y+ ++ G
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + FP V +++L + K + L + G+ + T
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ R V + G+ P T N +++GLC +A A+ +++ +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ YT+ +I G CK G E N+ + PN + YN ++ G
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F QM++ P + +N L + + A A+ + + S + PDIYT NI+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I +C + G + + G+ P NT+++G C + + A + + M+ G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
PNS T+ +I + GD E++ ++ M R C
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEM--RSC 602
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ P V F++L + A L + PDI+T + +IN
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R + L+ P T +T++ G C V + R M G
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ +I+GF + D ++A + + MV PN + YN ++DG
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AVA QM+ P + + ++ + + A+SL+K+ + D+ N +I+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC + L++ + G+RP T +++++ LC + A M P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF A+I+ F K G A M++R +P+ Y+++++G
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 93/174 (53%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
RS L+ + F +M+ + P P + DF+ + + +A++K+Y ISL G+ D+
Sbjct: 45 RSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
Y+ NIVINCLC R LSV+G + K G P T+++++NG C N V A+
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME G++P+ + II+G CKIG AV M +AV YN+++ G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 3/166 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ + P V F ++ + ++ A+ L + V PD++T N +IN
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R +L L+ G P T NT++NG C V R M G
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ T+ II G+ + G ++A M R PN Y+ ++ G
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYG 390
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ +M+ P V +SL + AI L+ + G PD+ N +I+
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + + + + + G+R T N++V GLC + A R M P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF A+I+ F K G A+ M R +P+ YN++++G
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +D A M+ P V +N+L ++K L + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D T N +I R + + RP T + ++ GLC+ V A+
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+M+ + + + T+ +I+G CKIG+ E A R++ + +P+ V Y ++ G
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 3/168 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K +D F +M +N++ + AA + R S
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR- 378
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T +I++ LC R L + + K+ + T N +++G+C NV A
Sbjct: 379 --PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
R + G +P+ ++ +I+GFC+ + + L R M E P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 98/179 (54%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N + + +D AV F M+ + PFP + +FN L + VA+ + ISL ++ + G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ D+YT +I INC C + + L+VL + K G P TL++++NG C ++ AV
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GY+P+++TF +I+G AV + MV+R C+P+ V Y +++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN K + AVA QM+ P F +L + + A++L+ + G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T V+N LC L++L + ++ NTI++ LC +V AV
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
ME G +PN T+ ++IN C G A + NM+E+ PN V +NA++D
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ ++M AA V FN++ + + +H A+ L + G+ P++ T N
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INCLC+ R + +L + + + P T N +++ E + A M
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P++ T+ +INGFC + A + MV + C PN YN +++G
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AVA QM+ P + + ++ + + A++L+ + ++ + ++ N +I+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R + + + G+RP T N+++N LC + A +M P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF A+I+ F K G A M++R +P+ + YN +++G
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 70/179 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + A ML P V FN+L + A L +
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD T N++IN C R + + P T NT++NG C V V
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M G N+ T+ II GF + GD +SA + + MV + + Y+ ++ G
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A +M+ + P +N L A + K S P+I T N +IN
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C +R G+ + + + GL T T TI+ G + SA + M +
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ +++G C G ++A++ + + + E N +YN +++G
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 15/175 (8%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + P ++ +N+L + K + L + G+ + T
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLR---PTT-ATLNTIVNGLCLENNVASAVTFTRHM 161
+I A +VFK + PT T + +++GLC + +A+ +++
Sbjct: 439 IIQGFFQ----AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESA--VLCMRNMVERHCEPNAVVYNAIMDG 214
+ + + N + + +I G CK G A + C ++ +P+ V YN ++ G
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI-----KPDVVTYNTMISG 544
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N + +K LD A+ F M+ + P P + +FN L + +A+ K + ISL ++
Sbjct: 57 LRNGLHDMK-LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ +YT NI+INC C + + L++LG + K G P+ TL++++NG C ++ AV
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GY+P++ TF +I+G AV + MV+R C+PN V Y +++G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN K + AVA QM+ P F +L + + A++L+ R G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ T +V+N LC T L++L + + NTI++ LC +V A+
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ME G +PN T+ ++I+ C G A + +M+E+ PN V +NA++D
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ ++M AA V FN++ + + +H A++L K + G+ P++ T + +
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+CLC R + +L + + + P T N +++ E A M
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +T+ +++NGFC + A MV + C P+ V YN ++ G
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 64/166 (38%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ P + FN+L + + A L + PDI+T N ++N
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R + + P T NT++ G C V R M + G
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ T+ +I G GD ++A + MV P+ + Y+ ++DG
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + FP V +N+L ++K L + G+ D T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I L H V + G+ P T + +++GLC + A+ +M+ +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + Y + +I G CK G + ++ + +PN V YN ++ G
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F QM++ P + ++ L + A+ + S + DIY +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I +C + G + + G++P T NT+++GLC + + A + M+ G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
PNS T+ +I + GD ++ +R M R C
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREM--RSC 604
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 38 NSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA 97
N + LK LD AVA F +M+ + PFP + +F+ L + +A+ + ISL ++ + G+
Sbjct: 55 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
+ YT +I+INC C + L+VLG + K G P TL++++NG C ++ AV
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 158 TRHMENAGYQPNSYTF-----------------------------------GAIINGFCK 182
M GYQPN+ TF G ++NG CK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GDT+ A + M + EP ++YN I+DG
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN K + AVA QM P FN+L + + A++LI R + G
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T +V+N LC T ++L + + L P NTI++GLC ++ A+
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ME G +PN T+ ++I+ C G A + +M+ER P+ ++A++D
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A ++M P V +N++ + + KH A++L K + G+ P++ T + +
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+CLC+ R + +L + + + P T + +++ E + A M
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ ++INGFC + A MV +HC P+ V YN ++ G
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + FP V +N+L + K + + + G+ + T NI
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I L + + G+ P T NT+++GLC + A+ +++ +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P YT+ +I G CK G E N+ + +P+ V YN ++ G
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ L A + +M+ + P + ++SL A + + S
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T N +I C +R G+ V + + GL T T N ++ GL + A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G PN T+ +++G CK G E A++ + EP YN +++G
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F +M++ P + +N+L + + A+ + + S + P IYT NI+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I +C + G + + G++P NT+++G C + + A + M+ G
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
PNS + +I + GD E++ ++ M R C
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEM--RSC 600
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ + F +M +N L + + A + K S GV P+I T
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +++ LC + + V + ++ + PT T N ++ G+C V ++
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G +P+ + +I+GFC+ G E A + M E PN+ YN ++
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 100/175 (57%), Gaps = 1/175 (0%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
++ LK LD A+ F M+ + PFP + +F+ L + +A+ + ISL ++ + G++ +
Sbjct: 51 LQDLK-LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+YT +I IN C + + L++LG + K G P+ TLN+++NG C N ++ AV
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GYQP++ TF +++G + AV + MV + C+P+ V Y A+++G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + AVA QM+ P F +L + + + A++L++R G
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T VIN LC L++L + K + NTI++GLC ++ A
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
ME G +P+ +T+ +I+ C G A + +M+E++ P+ V +NA++D
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 1/169 (0%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ ++M V +N++ + + KH A L + + G+ PD++T N +
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+CLC+ R + +L + + + P N +++ E + A M + +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 167 -QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ + +I GFCK E + R M +R N V Y ++ G
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A + K+ S GV PDI T NI+++ LC+ L V + K ++ T T++
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
LC V + G +PN T+ +++GFC+ G E A M E P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 204 NAVVYNAIM 212
N+ YN ++
Sbjct: 530 NSGTYNTLI 538
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 72/175 (41%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
++ K ++A + + + + FP V +N+L + K + + + G+ +
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
T +I+ R V + G+ P T N +++GLC NV +A+
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+M+ + + T+ +I CK G E ++ + +PN V Y +M G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 2/155 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F QM++ P + +N L + + A+ + + + DI T +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I LC + G + + G++P T T+++G C + A M+ G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
PNS T+ +I + GD ++ ++ M R C
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEM--RSC 560
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Query: 38 NSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA 97
N + LK LD AV F +M+ + P P + +FN L + +A+ + ISL +R + ++
Sbjct: 54 NVLLDLK-LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
D+Y+ NI+INC C + L+VLG + K G P TL++++NG C ++ AV
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M YQPN+ TF +I+G AV + MV R C+P+ Y +++G
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN K + AVA QM P FN+L + + A++LI R + G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD++T V+N LC LS+L + K + TI++ LC NV A+
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+N G +PN T+ ++I C G A + +M+ER PN V ++A++D
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ + F +M +N+L + + A + K+ S GV PDI T
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+++ LC + L V + K+ + P T N ++ G+C V +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G +PN + +I+GFC+ G E A R M E PN+ YN ++
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + FP V +N+L + K + L + G+ + T N
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I L + + G+ P T + +++GLC + A+ +++ +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ YT+ +I G CK G E ++ + +PN ++Y ++ G
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A++ +M V + ++ + K+ A++L + G+ P++ T N
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I CLC+ R + +L + + + P T + +++ E + A M
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +T+ ++INGFC + A M+ + C PN V YN ++ G
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 64/166 (38%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ P V F++L + A L + PDI+T + +IN
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R + L+ P T NT++ G C V + R M G
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ +I G + GD + A + MV P+ + Y+ ++DG
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F +M++ P + ++ L + + A+ + + S + PDIYT NI+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I +C + G + + G++P T+++G C + A R M+ G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
PNS T+ +I + GD ++ ++ M R C
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEM--RSC 599
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 90/159 (56%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ + P P + +FN L + +A+ K + ISL ++ G++ ++YT NI+INC C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ L++LG + K G P+ TL++++NG C ++ AV M GY+P++ TF
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I+G AV + MV+R C+PN V Y +++G
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN K + AVA QM+ P F +L + + A++L+ R G
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ T +V+N LC ++L + + NTI++ LC +V A+
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ME G +PN T+ ++I+ C G A + +M+E+ PN V +NA++D
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A ++M AA V FN++ + + +H A++L K + G+ P++ T +
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+CLC R + +L + + + P T N +++ E A M
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +T+ ++INGFC + A MV + C P+ YN ++ G
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AVA +M+ P + + + + + A +L+ + ++ + D+ N +I+
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R L++ + G+RP T +++++ LC + A M P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF A+I+ F K G A +M++R +P+ YN++++G
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ + FP + +N+L ++K L + G+ D T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I L H V + G+ P T + +++GLC + A+ +M+ +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + Y + +I G CK G + ++ + +PN V YN ++ G
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 64/166 (38%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ P + FN+L + + A L + PDI+T N +IN
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R + + P T NT++ G C V R M + G
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ T+ +I G GD ++A + MV P+ + Y+ ++DG
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F QM++ P + ++ L + A+ + S + DIY +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I +C + G + + G++P T NT+++GLC + + A + M+ G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
P+S T+ +I + GD ++ +R M R C
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREM--RSC 529
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+SIR + A A F +M+ + P P + DF L T A + Y I ++ G
Sbjct: 46 FLHSIR----FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ D+Y+ I+I+C C R +F LSVLG + K G P+ T ++++G CL N + A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M +GY+PN + +I+G CK G+ A+ + M ++ + V YN ++ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A++ +M+ P + F SL A SL+ SG P++ N
Sbjct: 122 LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT 181
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC L +L + K GL T NT++ GLC + A R M
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ TF A+I+ F K G+ + A + M++ +PN V YN+I++G
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ + P V +N+L + + A+ L+ G+ D+ T N ++ LC+ R
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ +L + K + P T +++ + N+ A + M + PN+ T+ +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
IING C G A M + C PN V YN ++ G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ + P V F +L + + A L K S V P+ T N +IN
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R L+ G P T NT+++G C V + + M G+
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +T+ +I+G+C++G A+ MV R P+ + + ++ G
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 66/162 (40%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M + FP V +N+L + + + + L +R G DI+T N +I+ C
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ + L + + + P T +++GLC+ + SA+ M +
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +I+G CK E A + +P+A Y ++ G
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A+ F M + PFP + +F+ L + +A+ + IS ++ G++ ++YT NI
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC C R + L++LG + K G P TLN+++NG C N ++ AV M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
Y+P++ TF +I+G AV + MV+R C+P+ V Y A+++G
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + AVA QM+ P F +L + + A++LI R G
Sbjct: 154 LLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T V+N LC T L++L + + +T+++ LC + A+
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
MEN G +PN T+ ++I+ C G A + +M+ER PN V ++A++D
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ ++M AA V ++++ + + +H A++L + GV P++ T + +
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+CLC+ R + +L + + + P T + +++ + + A M
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN +T+ ++INGFC + A + M+ + C PN V YN +++G
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A M+ P + F++L + A L + + P+I+T + +IN
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C L R +L L+ + P T NT++NG C V + R M G
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ +I+GF + D ++A + + MV PN + YN ++DG
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ L A + +M+ + P + ++SL A +++
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ T N +IN C +R G+ + + + GL T T T+++G + +A
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G PN T+ +++G CK G A++ + EP+ YN +++G
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 61/149 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L L A M+ + P V +N+L + K + L + G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ + T +I+ R V + G+ P T N +++GLC +A A+
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+++ + +P+ YT+ +I G CK G
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N IR +K D+ FFH M+ P P + DF+ L + +++ K Y I L ++ G
Sbjct: 53 LRNGIRFMKLDDSLDLFFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ ++ T NI++NC C + + LS LG + K G P+ T +++NG C + V A+
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GY+PN + II+G CK ++A+ + M + P+ V YN+++ G
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ F QM+ P V +N++ + ++K A+ L+ R G+ PD+ T N +I+
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R + ++ + K + P T N +++ E V+ A F M P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ +I G C + A MV + C P+ V Y+ +++G
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN L A++F +M+ P + F SL R A+ + + G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ N +I+ LC ++ L +L + K G+ P T N++++GLC + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M P+ +TF A+I+ K G A M+ R +P+ V Y+ ++ G
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M +P V FN+L + + A + + PDI T +++I LC R
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ G + G P T + ++NG C V + M G N+ T+
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I G+C+ G A R MV PN + YN ++ G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F+ +M+ + P + ++ L + A + S G PD+ T +I+IN
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C ++ G+ + + + G+ T T ++ G C + A R M G P
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N T+ +++G C G E A++ + +M + + + V YN I+ G
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 10/174 (5%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F M++ FP V ++ L ++K + L GV + T I
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C + + + G+ P T N +++GLC + A+ M+ G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 166 YQPNSYTFGAIINGFCKIGDTESA--VLCMRNMVERHCE---PNAVVYNAIMDG 214
+ T+ II G CK G+ A + C N C+ P+ Y +M G
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLN-----CQGLMPDIWTYTTMMLG 475
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 66/169 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K ++ + F +M + L R A + +R G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+I T N++++ LC + L +L + K G+ T N I+ G+C VA A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
+ G P+ +T+ ++ G K G A R M E PN
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L + + S+K DA + F M ++P P + DF+ L +A+ Y A ISL + G
Sbjct: 51 LRSGLHSIKFNDA-LTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ D+Y+ +I+C C R + LS LG + K G P+ T ++VNG C N A+
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY+PN + II+ C+ G +A+ +++M + P+ V YN+++
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+++M+ + P + +NSL + A ++ S G P+ T N +IN C
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+R G+ +L ++ + G+ T T NT+ G C ++A M + G P+ YT
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT 396
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F +++G C G A++ + ++ + + YN I+ G
Sbjct: 397 FNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ Q++ P V +N++ + A+ ++K G+ PD+ T N +I
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L H +L + + G+ P T + +++ E + A M P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N T+ ++ING C G + A + +V + PNAV YN +++G
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A + +++ FP +N+L + K + ++ GV D +T N
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+ C + + VLG + G+ P T N +++GLC + A+ ++ +
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ II G CK E A ++ + P+ + Y +M G
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIG 473
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 50/221 (22%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
K+LD A+ FF M+ + PF D N + R AISL ++ + +IY+
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
NI+I C C + +F LS G + K G +P T NT+++GLCLE+ ++ A+ +M
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 163 NAGY--------------------------------------------------QPNSYT 172
G+ + T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+G I+NG CK+GDT+SA+ + M E H +P+ V+Y+AI+D
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AVA F QM+ P V FN+L + A +L+ + G+ D+ T ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
N +C + T L++L + +T ++P + I++ LC + + + A M G
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
PN +T+ +I+GFC G A +R+M+ER P+ + +NA++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 70 SLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT 129
+LF ++ T + A++L + G+ P + T N +IN LC R +++ +
Sbjct: 197 ALFGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
GL T TIVNG+C + SA+ ME +P+ + AII+ CK G A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M+E+ PN YN ++DG
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDG 340
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 39 SIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAP 98
S++ K +A +ML FP +NS+ + + A K +P
Sbjct: 376 SVKEGKLFEAE-KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASP 430
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
D+ T N +I+ C +R G+ +L + + GL T T NT+++G C +N+ +A
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G P++ T ++ GFC+ E A+ + + + V YN I+ G
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + + +A+ +M + P V ++++ + + H++ A L G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+AP+++T N +I+ C R + +L + + + P T N +++ E + A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M + P++ T+ ++I GFCK + A ++M + P+ V +N I+D
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIID 440
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + AA L + S GV PD T NI++ C + L + ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ + T N I++G+C + V A + G +P+ T+ +I+GFC
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M + EP+ YN ++ G
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 71/161 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L+AA F +M++ P N L + A+ L + S
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D NI+I+ +C + + + G+ P T N +++G C ++ ++ A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
M++ G++P++ T+ +I G K G+ + ++ + M
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 109 bits (272), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 50/221 (22%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
K+LD A+ FF M+ + PF D N + R AISL ++ + +IY+
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
NI+I C C + +F LS G + K G +P T NT+++GLCLE+ ++ A+ +M
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 163 NAGY---------------QPNSYTF---------------------------------- 173
G+ P TF
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 174 -GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G I+NG CK+GDT+SA+ + M E H +P+ V+Y+AI+D
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Score = 87.4 bits (215), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 81/164 (49%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AVA F QM+ P V FN+L + A +L+ + G+ D+ T ++N
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+C + T L++L + +T ++P + I++ LC + + + A M G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N +T+ +I+GFC G A +R+M+ER P+ + +NA++
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 70 SLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT 129
+LF ++ T + A++L + G+ P + T N +IN LC R +++ +
Sbjct: 197 ALFGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
GL T TIVNG+C + SA+ ME +P+ + AII+ CK G A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M+E+ PN YN ++DG
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDG 340
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+ML FP +NS+ + + A K +PD+ T N +I+ C +
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
R G+ +L + + GL T T NT+++G C +N+ +A + M + G P++ T
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ GFC+ E A+ + + + V YN I+ G
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + + +A+ +M + P V ++++ + + H++ A L G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+AP+++T N +I+ C R + +L + + + P T N +++ E + A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M + P++ T+ ++I GFCK + A ++M + P+ V +N I+D
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIID 440
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 63/147 (42%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + AA L + S GV PD T NI++ C + L + ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ + T N I++G+C + V A + G +P+ T+ +I+GFC
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M + EP+ YN ++ G
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 71/161 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L+AA F +M++ P N L + A+ L + S
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D NI+I+ +C + + + G+ P T N +++G C ++ ++ A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
M++ G++P++ T+ +I G K G+ + ++ + M
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N + +K D A + F +ML + P P + DF + T +A+ + I L + + G
Sbjct: 51 LRNELHCIK-FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLG 109
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ D+Y+ I+I+C C R + L++LG + K G RP+ TL +++NG C N AV
Sbjct: 110 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+ G+ PN + +ING CK D +A+ M ++ +AV YN ++ G
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+M+ P + SL + + A+SL+ G P++ N VIN LC R
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
L V + K G+R T NT+++GL A R M PN F
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+I+ F K G+ A + M+ R PN YN++++G
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A F M++ FP V +N+L T ++K + L G+ D +T N
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C + V + G+ P T N +++ LC + A+ ++ +
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ II G C+ + A R++ + +P+A+ Y ++ G
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
Query: 54 HQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
+Q L + F +N+L + A + R GV+PDI T NI+++CLC+
Sbjct: 352 YQGLVGDAFT----YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
+ L ++ + K+ + T N I+ GLC + + A R + G +P++ +
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+I+G C+ G A R M E P+ +Y+ +
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 55/128 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A F++M+ P + +N L + A+ +++ S + DI T NI
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + + + + G++P T+++GLC + A R M+ G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 166 YQPNSYTF 173
+ P+ +
Sbjct: 495 FMPSERIY 502
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N + SL+ + A+ F M+ + P P + DF L +A+ K + I+L G
Sbjct: 44 LRNGLHSLQ-FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V+ D+YT N+++NC C + S LG + K G P T +++NG CL N + A+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G +P+ + II+ CK G A+ M P+ V+Y ++++G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A++ +QM+ P V + ++ + + H A+SL + + G+ PD+
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N LC+ R S+L + K ++P T N +++ E A M
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN +T+ ++INGFC G + A M + C P+ V Y ++++G
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A +F +M+ P + F SL A+S++ + G+ PD+ +I+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC + LS+ + G+RP ++VNGLC A + R M +P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ TF A+I+ F K G A M+ PN Y ++++G
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ F QM P V + SL + + + A SL++ + PD+ T N +I+
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+ + + + + P T +++NG C+E V A ME G P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + ++INGFCK + A+ M ++ N + Y ++ G
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 3/182 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K +D A+ F++M + +L + A + S G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK---TGLRPTTATLNTIVNGLCLENNVA 152
V P+I T N++++CLC+ + L + + K G+ P T N +++GLC +
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A+ M T+ II G CK G ++AV ++ + +PN V Y ++
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 213 DG 214
G
Sbjct: 503 SG 504
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 59/150 (39%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN+L + + A L +AP+I+T +IN C +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L+ G P +++NG C V A+ M G N+ T+ +I GF +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+G A +MV R PN YN ++
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLF---TFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ A F M++ P ++ +N L + + K +++ GVAP+I+T
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N++++ LC+ + L V + K + T I+ G+C V +AV + +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
G +PN T+ +I+G + G A + R M E
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 103 bits (257), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
HL++ + + +D A+ F +M FP V+ + L + ++ + A++L+K +
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ P+I+T ++I+ LC + +LG + + GL P T N ++NG C + A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
V ME+ PN+ T+ +I G+CK + A+ + M+ER P+ V YN+++DG
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Score = 77.0 bits (188), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N ++ AV M + P + +N L ++ + A + ++ +
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKA-MGVLNKMLERK 457
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD+ T N +I+ C +L L+ GL P T ++++ LC V A
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+E G PN + A+I+G+CK G + A L + M+ ++C PN++ +NA++ G
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 69/155 (44%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ ++ML P V +NSL R+ ++ +A L+ + G+ PD +T +I+
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC +R + + + G+ P +++G C V A M + P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
NS TF A+I+G C G + A L MV+ +P
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 78/214 (36%), Gaps = 35/214 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLNS+ +D + +ML P + +N + + + A + + +G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV---- 151
+ PD +T +I C + V + G R +++GLC+ +
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 152 -------------------------------ASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+ A+ + ME G +PN +T+ +I+
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C E A + M+E+ PN + YNA+++G
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A +ML+ N P FN+L + A L ++ G+ P + T I
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ L S + +G +P T T + C E + A M G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
P+ +T+ ++I G+ +G T A ++ M + CEP+
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 19/186 (10%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D A + F QML++ P + + R A ++ + +GV+PD++T +
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNG---------------LCLENN 150
+I L +T F VL + TG P+ T +++ LC +N
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 151 VA---SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH-CEPNAV 206
+ + V M PN+ ++ +I G C++G+ A +M P+ +
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 207 VYNAIM 212
V+NA++
Sbjct: 798 VFNALL 803
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 80/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K ++ A F + P V + +L + A ++++ S
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+ T N +I+ LC + + + K GL+PT +T +++ L + + A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + M ++G +P+++T+ I +C+ G A M M E P+ Y++++ G
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N + +L+ DA + F +M+ + P P + DF L + +A+ Y ISL ++ G
Sbjct: 55 LRNGLHNLQFNDA-LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA- 154
+ P + T NIV++C+C + LG + K G P T +++NG C N + A
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 155 ---------------VTFT---------RHMENA----------GYQPNSYTFGAIINGF 180
VT+T RH+ +A G +PN T+ A++ G
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
C+IG A +R+M++R EPN + + A++D
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN ++ A+A F Q+L P V + +L + + +H A+ L + ++G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ T N ++ LC + R +L + K + P T +++ + A
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M P+ +T+G++ING C G + A M C PN V+Y ++ G
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F +M+ P + F SL AI+L + G P++ T +I
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
CLC R + + + G RP T N +V GLC A R M +P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF A+I+ F K+G A M++ P+ Y ++++G
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 73/171 (42%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ L+ AV F+QM P V +N+L T + + A L++ + P++ T
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+ + + + ++ + + P T +++NGLC+ + A ME
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN + +I+GFCK E + M ++ N + Y ++ G
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 69/179 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + LD A F+ M +P + +L ++K + + G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V + T ++I C + R V + P T N +++GLC V A+
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+M N T+ II G CK+G E A ++ + +PN + Y ++ G
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
A + + S PDI T N++++ LC + L + + K + T I+
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
G+C V A + + G +PN T+ +I+GFC+ G A + M E
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 203 PNAVVYN 209
PN VY
Sbjct: 501 PNESVYK 507
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 54/127 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F+QM + P ++ +N L + A+ + + + +I T I+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I +C L + + +F G++P T T+++G C + A + + M+ G+
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 167 QPNSYTF 173
PN +
Sbjct: 500 LPNESVY 506
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ K +D A+ + +M++ +P + +N++ T + + A+ ++ + S G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P + T N VI+ L +T + +L + L+P T T +++V GL E V A+
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F E G +PN+ TF +I+ G CK T+ A+ + M+ R C+PN Y +++G
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +M P V +N L + + AI + SSG P++ T NI++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+C R +L + + G P+ T N ++N LC + + A+ M G QP
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
NS ++ +++GFCK + A+ + MV R C P+ V YN ++
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N I LD A+ F + M ++ P V N + + T + A L+ G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P + T NI+IN LC + +L + + G +P + + N +++G C E + A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G P+ T+ ++ CK G E AV + + + C P + YN ++DG
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L S+ L A+ +ML + +P V + L R A+ L+ G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T N+++N +C R + L + +G +P T N I+ +C A
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G+ P+ TF +IN C+ G A+ + M + C+PN++ YN ++ G
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A+ +M P +N L + K AI ++R S G PDI T N
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ LC + + +L + G P T NT+++GL A+ M
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P++ T+ +++ G + G + A+ PNAV +N+IM G
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A ML P V FN L F+ R AI ++++ G P+ + N +++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C ++ + L + G P T NT++ LC + V AV + + G P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +I+G K G T A+ + M + +P+ + Y++++ G
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A + + P V +N + + + A+S++ R V+PD+ T N ++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC + + VL + + P T ++ C ++ V A+ M + G P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ T+ ++NG CK G + A+ + +M C+PN + +N I+
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +N++ + + A+ ++ R PD+ T I+I C + +
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + G P T N +VNG+C E + A+ F M ++G QPN T I+ C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G A + +M+ + P+ V +N +++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 4/180 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
HL +R+ L+ F M+ P + +L R A +++ S
Sbjct: 108 HLRQMVRT-GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGS 166
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PD+ T N++I+ C LSVL + + P T NTI+ LC + A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M P+ T+ +I C+ A+ + M +R C P+ V YN +++G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 92.0 bits (227), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + A +M+ P V +++L + + A S + + G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVL--GLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
P+IYTL+ ++ C LR T F L ++ GL+P NT+V G C N+
Sbjct: 312 CHPNIYTLSSLVKG-CFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
AV+ HME G PN T+G++INGF K G + AV M+ C PN VVY +++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 214 G 214
Sbjct: 431 A 431
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 5/180 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
H+L+++ + + M P V +N L + + A L+ +
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PD + VI+ +C + GL G P + N ++NGLC E++ A
Sbjct: 211 GCCPDAVSYTTVISSMCEV-----GLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGA 265
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M G PN ++ +IN C G E A + M++R C PN ++++ G
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 6/167 (3%)
Query: 49 AVAFFHQMLAANPFPCVKD-FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
+V + Q + F C +D F S+ + + A+ + R G P + N V+
Sbjct: 94 SVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVL 153
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+ L R V + + G P T N ++ LC N V A M N G
Sbjct: 154 DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P++ ++ +I+ C++G + R + ER EP VYNA+++G
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEG----RELAERF-EPVVSVYNALING 255
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 1/167 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV+ F M P ++ + SL A+ A+ + + +SG P++ ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY-Q 167
LC + S++ ++ K P+ T N + GLC + A R ME
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ +++G K E A R + R E ++ YN ++ G
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +LD AV +++ML + P V + ++ + R + A SLI+
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
AP + T N I LC R + V + + P T N +++GL N + A
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
TR + G + +S T+ +++G C G A+ + M+ P+ + N I+
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMII 570
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 90.5 bits (223), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
++ A+ F +M + F P FN+L + + H AI ++ G PD+YT N
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
VI+ LC L + VL + P T T NT+++ LC EN V A R + +
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G P+ TF ++I G C + A+ M + CEP+ YN ++D
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT-------------------- 102
P V FN L + R AI +++ S G+ PD T
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 103 ---------------LNIVINCLCHLRRTAFGLSVLG-LVFKTGLRPTTATLNTIVNGLC 146
+N++++ C R L+ + + + G P T NT+VNGLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 147 LENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
+V A+ M GY P+ YT+ ++I+G CK+G+ + AV + M+ R C PN V
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 207 VYNAIM 212
YN ++
Sbjct: 367 TYNTLI 372
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
P V FNSL + T+++ A+ L + S G PD +T N++I+ LC + L+
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+L + +G + T NT+++G C N A ME G NS T+ +I+G C
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
K E A M M+ +P+ YN+++
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ + L + AV QM+ + P +N+L + + + A L + S G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N +I LC R + + + G P T N +++ LC + + A+
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ME +G + T+ +I+GFCK T A M N+V YN ++DG
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Score = 78.2 bits (191), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 76/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ F +M + P +N L + A++++K+ SG A + T N +I+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C +T + + G+ + T NT+++GLC V A M G +P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ YT+ +++ FC+ GD + A ++ M CEP+ V Y ++ G
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + A+ ML P V +NS+ + + + A+ ++ + +
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P+ T N +I+ LC + + ++ G+ P T N+++ GLCL N A+
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G +P+ +T+ +I+ C G + A+ ++ M C + + YN ++DG
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 78/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S+ S LD A+ QM + V +N+L + A + G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V+ + T N +I+ LC RR ++ + G +P T N+++ C ++ A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G +P+ T+G +I+G CK G E A +R++ + YN ++ G
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 84 AISLIKR-AHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
A++ I+ ++ G PD YT N ++N LC + ++ ++ + G P T N+++
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+GLC V AV M PN+ T+ +I+ CK E A R + +
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 203 PNAVVYNAIMDG 214
P+ +N+++ G
Sbjct: 398 PDVCTFNSLIQG 409
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + +++ A L+ + G PD YT N ++ C ++ +
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G P T T+++GLC V A R ++ G + + +I G + T
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 188 SAVLCMRNMVERH-CEPNAVVYNAIMDG 214
A+ R M+E++ P+AV Y + G
Sbjct: 628 EAINLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 84 AISLIKRAHSS----GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLN 139
++ L++ +H+ G+ PD+ T N++I LC + + +L + GL P T
Sbjct: 169 SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228
Query: 140 TIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
T++ G E ++ A+ M G ++ + I++GFCK G E A+ ++ M +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 200 H-CEPNAVVYNAIMDG 214
P+ +N +++G
Sbjct: 289 DGFFPDQYTFNTLVNG 304
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 1/150 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + ++ A QM+ P +NSL T R A +++ S+G
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T +I+ LC R +L + G+ T N ++ GL + A+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 156 TFTRHM-ENAGYQPNSYTFGAIINGFCKIG 184
R M E P++ ++ + G C G
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAA-NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
LD A A M+ + P V +NSL + A+ ++ + G P++Y+
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+++ C L + +VL + GL+P T N +++ C E+ + AV R M
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G +P+ YTF ++I+G C++ + + A+ +R+M+ N V YN +++
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 35/214 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ L +D A ++M A P FN L + + A+ + + G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN------------ 143
PD+YT N +I+ LC + L +L + G+ T T NT++N
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 144 -----------------------GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
GLC V A + M G+ P++ + +ING
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ G E AV + MV R P+ V +N++++G
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + + A+ M++ +N+L R A L+ G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D T N +I LC S+ + + G P+ + N ++NGLC V AV
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
F + M G P+ TF ++ING C+ G E + R + P+ V +N +M
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAA------AISLIKRAHSSGVAPDIYT 102
A F+ ML+ P +LFTF K + A A+SL++ G P+
Sbjct: 201 AANVFYDMLSRKIPP------TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI 254
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+I+ L R L +L +F G P T N ++ GLC + + A M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ P+ T+G ++NG CKIG ++A +++ R +P V++N ++ G
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHG 362
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + R A SL ++ G AP + NI+IN LC + +
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G P T N+++NGLC + +T R ++ G P++ TF +++ CK G
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIM 212
A L + +E PN ++ ++
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILL 711
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ H M P V + L + A +++ + G+ P+ N +I+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R + + + + G +P T N++++GLC + + A+ R M + G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ +IN F + G+ + A + MV + + + YN+++ G
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 5/180 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S+ ++ A+ +M P + FN + + + A ++ R G
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
APD T ++N LC + R + F +P NT+++G + A
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDL----FYRIPKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 156 TFTRHMENA-GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G P+ T+ ++I G+ K G A+ + +M + C+PN Y ++DG
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A + F +ML P N L + R+ A+ K G PDI T N
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN LC R GL++ + G+ P T T NT+++ LC V A G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 166 YQPNSYTFGAIIN 178
+ PN T+ ++
Sbjct: 700 FVPNHRTWSILLQ 712
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K +N + + + A ++ S + P ++T +V+ C + LS+
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + K G P + T+++ L N V A+ M G P++ TF +I G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M+ R P+ + Y +M+G
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R +K L+ A QM + P + +N+L A+SL + S G++P +
Sbjct: 315 REMK-LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T NI+++ C T+ ++ + + G++P+ T +++ +N+ A+
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME G P+ +T+ +I+GFC G A ++MVE++CEPN V+YN ++ G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 46 LDAAVAFFHQM----LAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
++ A F +M L AN N LF + + + + ++ GV P++Y
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF----EMYEKMQEDGVFPNLY 269
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T N V+N LC RT V + + G+ T NT++ GLC E + A M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ G PN T+ +I+GFC +G A+ R++ R P+ V YN ++ G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + +M FP + +N + + + A + G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V+ +I T N +I LC + V+ + G+ P T NT+++G C + A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ R +++ G P+ T+ +++GFC+ GDT A ++ M ER +P+ V Y ++D
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++NS ++L+ ++++F++M+ P FN L TFV + + S + S
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSK 158
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V D+Y+ I+I C +L + + G P T+++G C + + A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G N T+ +ING K G + M E PN YN +M+
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 75/178 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L A++ + + P + +N L + R + A ++K G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P T I+I+ + + + + GL P T + +++G C++ + A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ M +PN + +I G+CK G + A+ ++ M E+ PN Y +++
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 65/164 (39%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
A +M P + L AR+ + AI L G+ PD++T +++I
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+ C + + + + P NT++ G C E + A+ + ME
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
PN ++ +I CK ++ A + M++ +P+ + + I
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A F +M+ + P V + SL + +K+ A+ ++ S G+ P+++T +
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC R+ + + ++ G RP T T++ GLC E + AV M G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
+P++ +G +I+GFC I A + M+ PN + +N
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYA-AAISLIKRAHSSGVAPDIYTLN 104
L+ A F+ M P V N L + R A + + G PD YT
Sbjct: 137 LNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG 196
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+I+ LC R + + + PT T +++NGLC NV A+ + M++
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +PN +T+ ++++G CK G + A+ M+ R C PN V Y ++ G
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R+ T+DA + F +M P + +L + + R A L AP +
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T +IN LC + + L + G+ P T +++++GLC + A+
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN T+ +I G CK + AV + M + +P+A +Y ++ G
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
RSL+ A+ F M+A P + + +L T + + + A+ L+ R + G+ PD
Sbjct: 277 RSLQ----AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLN-------TIVNGLCLENNVAS 153
VI+ C + + + L + G+ P T N +V GLC N +
Sbjct: 333 GLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSR 391
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A T M + G T +++ CK G+ + AV + +V C P+ + ++
Sbjct: 392 AFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 87.0 bits (214), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++AA F +M P +NS+ + + + PD+ T N
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC C + GL + GL+P + +T+V+ C E + A+ F M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN YT+ ++I+ CKIG+ A M++ E N V Y A++DG
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 36/215 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + + A F +M A P + +N+L + K+ A+ L+ G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 96 VAPDIYTLNIVINCLCHLRR-------------------TAFGLSVLGLVFKTG------ 130
+ PD+ I LC L + + +++ FK+G
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 131 ----------LRPTTATLNTIVNGLCLENNVASAVT-FTRHMENAGYQPNSYTFGAIING 179
+ T T +++GLC V+ AV F R + G Q N+ F A+I+G
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
CK E+A MV++ P+ Y ++MDG
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 69/146 (47%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F++LF+ + AI + V P + N +++ L +T +
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G RPT T N +++ +C E +V +A M+ G P++ T+ ++I+GF K+G +
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
V M + CEP+ + YNA+++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALIN 340
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 71/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A+ F+ M P + SL + + + A L GV ++ T
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC R + G + G+ P A+ N +++G N+ A+ ++ G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ +G I G C + E+A + M M E + N+++Y +MD
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L + F+ +M P V +++L + AI G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ YT +I+ C + + + + + G+ T +++GLC + A
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ AG PN ++ A+I+GF K + + A+ + + R +P+ ++Y + G
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ + L A ++ML V + +L + + A L + ++G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++ + N +I+ + L +L + G++P T + GLC + +A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ G + NS + +++ + K G+ + + M E E V + ++DG
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + F L V +K+ A+ L+ + ++G PD + N ++ C L + + + V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G+ P T NT++ GL V A + + M +AGY+P++ T+ +++NG C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G++ A+ + M R C PN YN ++ G
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 39 SIRSL---KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS- 94
++RSL +D A ++ + P +N L + + K +
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 95 GVAPDIYTLNIVINCLCH---LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
V PD+ + I+I+ +C+ LR + +S LG G +P NTI+ G C +
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG---NAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ AV + M+ G +P+ T+ +I G K G E A + ++ MV+ EP+ Y ++
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 212 MDG 214
M+G
Sbjct: 342 MNG 344
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 82 AAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTI 141
+ A+ + K+ GV PD T N +I L R L + G P TAT ++
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 142 VNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+NG+C + A++ ME G PN T+ +++G CK
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 65/163 (39%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV + +M P +N+L +++ A +K +G PD T ++N
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+C + LS+L + G P T NT+++GLC + + M+++G +
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
S + ++ K G A V+ +A Y+ +
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
L+ +D A+ F+ M +P + N + T ++R A + + ++Y
Sbjct: 167 QLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVY 226
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T NI+IN LC + LG++ G++PT T NT+V G L + A M
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ G+QP+ T+ I++ C G A +R M E P++V YN ++ G
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRG 336
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A A +M+ P + SL + R A L ++ G+ PD+ +N +++
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + S+L + + P T N ++ GLC E A M+ G +P
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ +I+G+ K GDT+ A + M+ P + YNA++ G
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A +M + P ++ +N + +++ + A +++ G+ PD + NI
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNI 332
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I + + + K G+ PT T NT+++GL +EN + +A R + G
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+S T+ +ING+C+ GD + A M+ +P Y +++
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A F M P + +N+L + A +I S G PD+ T N
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ +C+ R + VL + + GL P + + N ++ G ++ A + M G
Sbjct: 301 ILSWMCNEGRAS---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P YT+ +I+G E+A + +R + E+ ++V YN +++G
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
G+ P YT N +I+ L + ++ + + G+ + T N ++NG C +
Sbjct: 355 KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAK 414
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A M G QP +T+ ++I C+ T A +V + +P+ V+ N +M
Sbjct: 415 KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLM 474
Query: 213 DG 214
DG
Sbjct: 475 DG 476
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 69/180 (38%), Gaps = 3/180 (1%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
H+L + L ++ A F+ M V FN + + + A +
Sbjct: 195 HILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF 254
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ P I T N ++ R ++ + G +P T N I++ +C N A
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRA 311
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M+ G P+S ++ +I G GD E A MV++ P YN ++ G
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R KT +A F +++ P + N+L + A SL+K + PD
Sbjct: 444 RKNKTREAD-ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T N ++ LC + ++G + + G++P + NT+++G + + A
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M + G+ P T+ A++ G K + E A +R M PN + ++++
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIE 615
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 51/124 (41%)
Query: 91 AHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENN 150
AH ++++ C C LR + L+ + G P T T N I+ L N
Sbjct: 146 AHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNR 205
Query: 151 VASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
+ +A F M + N YTF +IN CK G + A + M +P V YN
Sbjct: 206 IENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNT 265
Query: 211 IMDG 214
++ G
Sbjct: 266 LVQG 269
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L+ +L+ + AV ++L P V +N+L + A ++ R S
Sbjct: 129 KLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
+PD T NI+I LC + L VL + +PT T ++ LE V A
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M + G +P+ +T+ II G CK G + A +RN+ + CEP+ + YN ++
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 78/167 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ +ML+ P + +N++ + + A +++ G PD+ + NI
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ L + + G ++ +F P T + ++ LC + + A+ + M+ G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P++Y++ +I FC+ G + A+ + M+ C P+ V YN ++
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A+ F M++ P + ++N++ + + A+ + + G +P+ + N
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+ + L L ++ + G+ P T N++++ LC E V A M +
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P+ T+ ++ GFCK E A+ + +MV C PN Y +++G
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 4/171 (2%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ M P ++ L R AI ++ S G PDI N
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
V+ LC + L + G + + G P +++ NT+ + L + A+ M + G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE--PNAVVYNAIMDG 214
P+ T+ ++I+ C+ G + A + +M R CE P+ V YN ++ G
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYNIVLLG 517
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 72/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL ++ + + +M + P V ++ L T + R A++L+K G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD Y+ + +I C R + L + G P NT++ LC A+
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G PNS ++ + + GD A+ + M+ +P+ + YN+++
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +N L + + L+ + S P++ T +I+I LC + +++
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L L+ + GL P + + ++ C E + A+ F M + G P+ + ++ CK
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAI 211
G + A+ + E C PN+ YN +
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTM 444
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 83.2 bits (204), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F ++L PC +N+L + A + + GV P++YT
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC + +T L +L L+ + P T N I+N LC + VA AV M+
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE--RHCEPNAVVYNAIMDG 214
+P++ T+ ++ G C GD + A + M++ + +P+ + YNA++ G
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ +K G+ D+ +I C G ++ V + G P T NT++
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G C + A M G +PN YT+ +I+G C +G T+ A+ + M+E+ EP
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 204 NAVVYNAIMD 213
NAV YN I++
Sbjct: 351 NAVTYNIIIN 360
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 66/146 (45%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
N+L + R++++ A S ++ + + +L+ ++ C +R+T F VL L+ K
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
G N ++ GLC AV+ R M P+ +++ +I GFC+ + E
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 189 AVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ M C + V + ++D
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDA 221
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
+RS + + A +F+ +ML + F + L + + A ++ G A +
Sbjct: 83 VRS-RNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+Y NI++ LC +S+L + + L P + NT++ G C + A+
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ +G + T+G +I+ FCK G + A+ ++ M E + VVY +++ G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V + N L + R A+SL++ + + PD+++ N VI C + L +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ +G + T +++ C + A+ F + M+ G + + + ++I GFC G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + ++ER P A+ YN ++ G
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ L L A F M+ P V + L + A+ L+
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV--AS 153
P+ T NI+IN LC A + ++ L+ K RP T N ++ GLC + ++ AS
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + +++ P+ ++ A+I+G CK A+ +VE+ + V N +++
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 77/177 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLNS ++ A+ + Q+ + + ++ +T A L+ + S
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P ++ N +++ LC + + + P + N +++G ++ SA
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M AG P+ +T+ +IN F K+G + A+ MV+ EP+A + ++++
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 48.1 bits (113), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
SS PD+ + N +I+ LC R L + L+ + T N ++N +V
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIG--DTESAVLCMRNMVERHCEPNAVVYNA 210
A+ + + ++ NS T+ A+I+GFCK G + +LC + E +P+ YN
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE--LQPSVFDYNC 534
Query: 211 IM 212
++
Sbjct: 535 LL 536
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 39 SIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAP 98
+IRS + + A F +ML + P V +N L + A++L + + G P
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
++ T N +I+ C LR+ G +L + GL P + N ++NGLC E +
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M GY + T+ +I G+CK G+ A++ M+ P+ + Y +++
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +N+L T AI++++ G++PD+ + + V++ C L V
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G++P T T ++++ G C + A M G P+ +T+ A+IN +C
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GD E A+ MVE+ P+ V Y+ +++G
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHSS 94
++ S L +D A++ H A P V +N++ R+K + + A ++ K S
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
V+P+++T NI+I C L++ + G P T NT+++G C +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M G +PN ++ +ING C+ G + + M R + V YN ++ G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S+ ++ A+ F QM P + + +L ++ + A +++ + +G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P + T N +IN C + ++VL + + GL P + +T+++G C +V A+
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M G +P++ T+ ++I GFC+ T+ A M+ P+ Y A+++
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ F +M P V +N+L + + L++ G+ P++ + N+
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
VIN LC R VL + + G T NT++ G C E N A+ M G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ ++I+ CK G+ A+ + M R PN Y ++DG
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +ML P V + SL + + + A+ + + G+ P+ T +++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
VL + G P+ T N ++NG C+ + A+ M+ G P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ +++GFC+ D + A+ R MVE+ +P+ + Y++++ G
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+A M P V ++++ + R+ A+ + + G+ PD T +
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C RRT + + + GL P T ++N C+E ++ A+ M G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ T+ +ING K T A + + P+ V Y+ +++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + ++ A+ + G+ P + T +I+ +C + L +
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
GL P T T+V+G + + A R M + G+ P+ T+ A+ING C G E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ + +M E+ P+ V Y+ ++ G
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSG 459
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 77/163 (47%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
F +MLA+ C+ FN L + + L+ + GV P+++T N+ I LC
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ ++G + + G +P T N ++ GLC + A + M N G +P+SY
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +I G+CK G + A + + V P+ Y +++DG
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Score = 79.3 bits (194), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 79/165 (47%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+A F++ L P V +N+L ++ A L G+ P++ T NI++N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC + + ++ ++ G P T N +++G + + +A+ M + G P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ YT+ +++NG CK E + + MVE+ C PN +N +++
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Score = 78.2 bits (191), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + + A M++ FP + FN L + A+ ++ +G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD+YT N ++N LC + + + + G P T N ++ LC + A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH-CEPNAVVYNAIM 212
M+N P++ TFG +I+GFCK GD + A R M E + + YN I+
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 76/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A ++M P V+ FN L + + + A L+K S G PDI+T NI+I+
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+ L +L ++ G+ P T N+++NGLC + + + M G P
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N +TF ++ C+ + A+ + M + P+AV + ++DG
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A + +M+ P +N+L + A ++ A +G PD +T +I+
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LCH T L++ G++P NT++ GL + + A M G P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP 424
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF ++NG CK+G A ++ M+ + P+ +N ++ G
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 66/166 (39%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F +M + P V +N++ + + + ++ A + R G+ PD+Y+ I +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C R L +L + G T+V G EN A M +G
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF ++ CK GD + + +++R PN YN + G
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 10/172 (5%)
Query: 46 LDAAVAFFHQMLAANPFPC-VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
LD A F +M A +N + + A L + + PD YT
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
++++ C G L + + G P+ TL ++N LC+E+ V A M
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAV--LCMRNMVERHCEPNAVVYNAIMDG 214
G P + +N C + E A L + +++++ C Y + DG
Sbjct: 702 GLVPEA------VNTICDVDKKEVAAPKLVLEDLLKKSC-ITYYAYELLFDG 746
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 9/175 (5%)
Query: 47 DAAVAFFHQMLAANPFPC---VKDFNSLFTFVARTKHYAAAIS----LIKRAHSSGVAPD 99
D AV FH+M+ + F C VK FNS+ + Y + ++ + ++P+
Sbjct: 129 DKAVDLFHRMV--DEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPN 186
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+ N+VI LC LR + V + + P T T+++GLC E + AV
Sbjct: 187 GLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M++ G P+ + +I+G CK GD + NM + C PN V YN ++ G
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Score = 80.5 bits (197), Expect = 7e-16, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 80/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + +D AV +M + P +N L + + L+ G
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+ T N +I+ LC + +S+L + + P T T++NGL + AV
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME GY N + + +I+G K G E A+ R M E+ C+PN VVY+ ++DG
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A ++M+A+ P ++SL +T A+ + K +G + + + +++
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM---EN 163
I+ LC + R + V + G++P T ++I+ GLC ++ +A+ M E
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
QP+ T+ +++G C D AV + +M++R C+P+ + N ++
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 78/169 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD AV+ +M+++ P + +L + + + A+ L+ G + + ++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ L + +S+ + + G +P + +V+GLC E A M +G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+YT+ +++ GF K G E AV + M + C N Y+ ++DG
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 62/131 (47%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+SL ++ G P+I +++++ LC + +L + +G P T ++++
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G AV + M+ G N + + +I+G C +G + A++ M+ +P
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Query: 204 NAVVYNAIMDG 214
+ V Y++I+ G
Sbjct: 501 DTVAYSSIIKG 511
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A++ + +M P + ++ L + R A ++ R +SG P+ YT + +
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+ + V + KTG + +++GLC V A+ M G
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMV---ERHCEPNAVVYNAIMDG 214
+P++ + +II G C IG ++A+ M+ E +P+ V YN ++DG
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ +TG RP T T++NGLC E V A+ M G+QP +G IING CK+GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMD 213
TESA+ + M E H + + V+YNAI+D
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIID 84
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F +M FP V ++ + R+ + A L++ + PD+ T + +IN
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L + + + G + + G+ PTT T N++++G C ++ + A M + P
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ TF +ING+CK ++ + M R N V Y ++ G
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + + ++A+ +M + V +N++ + + H+ A +L H G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T + +I+ C R +L + + + P T + ++N L E V+ A
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P + T+ ++I+GFCK A + +M + C P+ V ++ +++G
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 69/161 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N++ + A + ML FP +NS+ + A ++ S
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PD+ T + +IN C +R G+ + + + G+ T T T+++G C ++ +A
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
M ++G PN TF +++ C + A + ++
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 39/156 (25%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+G PD+ T ++N LC R L+++ + + G +P TI+NGLC +
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58
Query: 153 SAVTFTRHME-----------------------------------NAGYQPNSYTFGAII 177
SA+ ME + G P+ T+ +I
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 178 NGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ FC+ G A +R+M+ER P+ V ++A+++
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L + LK A F QM P V+ N+ + + A+ +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++P+ YTLN+V++ C + G+ +L + + G R T + NT++ G C + ++SA+
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +G QPN TF +I+GFC+ + A M + PN V YN +++G
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R++K L A F +M A N P +N+L ++ + A + +G+ DI
Sbjct: 320 RAMK-LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T N +I LC +T + + K L P ++T + ++ G C+ N +
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
M +G PN TF +++ FC+ D + A +R MV R
Sbjct: 439 MIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
++S+ +D A+ F+ +M P N + + R+ I L++ G
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
+ N +I C + L + ++ K+GL+P T NT+++G C + A
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ PN+ T+ +ING+ + GD E A +MV + + + YNA++ G
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 82 AAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTI 141
++A+ L SG+ P++ T N +I+ C + V G + + P T T NT+
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 142 VNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
+NG + + A F M G Q + T+ A+I G CK T A ++ + + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 202 EPNAVVYNAIMDG 214
PN+ ++A++ G
Sbjct: 410 VPNSSTFSALIMG 422
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+SLF A K + A + G P + + N ++ L R L +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ + P TLN +++G C + + + ME G++ ++ +I G C+ G
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
SA+ M + +PN V +N ++ G
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHG 317
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L + LK A F QM P V+ N+ + + A+ +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++P+ YTLN+V++ C + G+ +L + + G R T + NT++ G C + ++SA+
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +G QPN TF +I+GFC+ + A M + PN V YN +++G
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R++K L A F +M A N P +N+L ++ + A + +G+ DI
Sbjct: 320 RAMK-LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T N +I LC +T + + K L P ++T + ++ G C+ N +
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
M +G PN TF +++ FC+ D + A +R MV R
Sbjct: 439 MIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
++S+ +D A+ F+ +M P N + + R+ I L++ G
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
+ N +I C + L + ++ K+GL+P T NT+++G C + A
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ PN+ T+ +ING+ + GD E A +MV + + + YNA++ G
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 82 AAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTI 141
++A+ L SG+ P++ T N +I+ C + V G + + P T T NT+
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 142 VNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
+NG + + A F M G Q + T+ A+I G CK T A ++ + + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 202 EPNAVVYNAIMDG 214
PN+ ++A++ G
Sbjct: 410 VPNSSTFSALIMG 422
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+SLF A K + A + G P + + N ++ L R L +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ + P TLN +++G C + + + ME G++ ++ +I G C+ G
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
SA+ M + +PN V +N ++ G
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHG 317
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + + + + +M + P + +N++ + + + AAI L+ S G
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V D+ T N++I+ LC R A G +L + K + P T NT++NG E V A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G PN TF A+I+G G+ + A+ M + P+ V Y ++DG
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+F +ML P V FN L + + + L+++ SG AP I T N V++
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C R + +L + G+ T N +++ LC N +A R M PN
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +INGF G A + M+ PN V +NA++DG
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 382
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V N++ V ++ + S +K + PD+ T NI+IN LC +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + K+G PT T NT+++ C + +A+ HM++ G + T+ +I+ C+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
L +R+M +R PN V YN +++G
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 5/178 (2%)
Query: 38 NSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA 97
NS LK A + F +M P + SL + + H A +K H+ A
Sbjct: 595 NSGEGLK----AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
D N ++ +C A +S+ G + + + P + T ++++GLC + A+ F
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 710
Query: 158 TRHMENAG-YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ E G PN + ++G K G ++ + M P+ V NA++DG
Sbjct: 711 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
HL + + LK+L A A ++ +N+L T + ++ + A A+SL
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVM----------YNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF------KTGLRPTTATLNTIVNGLCLE 148
+ PD YT +I+ LC +T V+ ++F + + P V+G+
Sbjct: 683 SILPDSYTYTSLISGLCRKGKT-----VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 737
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ + F M+N G+ P+ T A+I+G+ ++G E + M ++ PN Y
Sbjct: 738 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 797
Query: 209 NAIMDG 214
N ++ G
Sbjct: 798 NILLHG 803
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 60 NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFG 119
N P V D L R ++ + + G P +YT N ++ +
Sbjct: 160 NSNPSVYDI--LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 120 LSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
S L + K + P AT N ++N LC E + + + ME +GY P T+ +++
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+CK G ++A+ + +M + + + YN ++
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 310
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ L+ G+ PDI T + +IN C + R ++ +++ GL P +T++
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
C + A+ M G+ + +TF ++ CK G A MR M P
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 204 NAVVYNAIMDG 214
N V ++ +++G
Sbjct: 582 NTVSFDCLING 592
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + A ++ML+ P FN+L ++ A+ + + G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P + ++++ LC + + G+ T +++GLC + AV
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M G P+ T+ A+INGFCK+G ++A + + PN ++Y+ ++
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 4/171 (2%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD--IYTL 103
LD AV ++M P + +++L + + A ++ R + G++P+ IY+
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS- 517
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
++ NC C + + + + G T N +V LC VA A F R M +
Sbjct: 518 TLIYNC-CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN+ +F +ING+ G+ A M + P Y +++ G
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 1/170 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ K + + + ++ P +SL + + + ++K G
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 859
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V D YT N++I+ C + ++ ++ G+ T + +V+ L + +
Sbjct: 860 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 919
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMV-ERHCEPN 204
M G P S + +ING C++GD ++A + M+ + C PN
Sbjct: 920 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 71/162 (43%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F +M+ P + +L + AA HS + PD+ T +I+ C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ + +F GL P + T ++NG C ++ A HM AG PN T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +I+G CK GD +SA + M + +PN YN+I++G
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Score = 80.5 bits (197), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 72/167 (43%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA FF++M + + P V + ++ + + A L G+ PD T +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
N C V + + G P T T+++GLC E ++ SA M G Q
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN +T+ +I+NG CK G+ E AV + + V Y +MD
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD+A H+M P + +NS+ + ++ + A+ L+ ++G+ D T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C +L + GL+PT T N ++NG CL + M G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ TF +++ +C + ++A ++M R P+ Y ++ G
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V ++++ R LI+ G+ P+ Y +I LC + + A
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G+ P T T+++G C ++ +A F M + P+ T+ AII+GFC+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
IGD A M + EP++V + +++G
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKH-YAAAISLIKRAHSSGVAPDIYTLN 104
L A F +ML V N T +++ + A AI + + GV ++ + N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
IVI+ +C L R +L L+ G P + +T+VNG C + M+
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +PNSY +G+II C+I A M+ + P+ VVY ++DG
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 75/177 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + A + M+ A P V + +L + + +A L+ G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+I+T N ++N LC + ++G GL T T T+++ C + A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G QP TF ++NGFC G E + M+ + PNA +N+++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 80 HYAAAISLIKRAHS-------SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLR 132
H+ + IK AH G PD+ + + V+N C ++ ++ + GL+
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P + +I+ LC +A A M G P++ + +I+GFCK GD +A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
M R P+ + Y AI+ G
Sbjct: 374 FYEMHSRDITPDVLTYTAIISG 395
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + ++ AV + AA + +L ++ A ++K G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P I T N+++N C G +L + G+ P T N++V C+ NN+ +A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G P+ T+ ++ G CK + + A + M + + Y+ ++ G
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 71/162 (43%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F +M+ P + +L + AA HS + PD+ T +I+ C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ + +F GL P + T ++NG C ++ A HM AG PN T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +I+G CK GD +SA + M + +PN YN+I++G
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Score = 80.5 bits (197), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 72/167 (43%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA FF++M + + P V + ++ + + A L G+ PD T +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
N C V + + G P T T+++GLC E ++ SA M G Q
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN +T+ +I+NG CK G+ E AV + + V Y +MD
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD+A H+M P + +NS+ + ++ + A+ L+ ++G+ D T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C +L + GL+PT T N ++NG CL + M G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ TF +++ +C + ++A ++M R P+ Y ++ G
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V ++++ R LI+ G+ P+ Y +I LC + + A
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G+ P T T+++G C ++ +A F M + P+ T+ AII+GFC+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
IGD A M + EP++V + +++G
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKH-YAAAISLIKRAHSSGVAPDIYTLN 104
L A F +ML V N T +++ + A AI + + GV ++ + N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
IVI+ +C L R +L L+ G P + +T+VNG C + M+
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +PNSY +G+II C+I A M+ + P+ VVY ++DG
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 75/177 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + A + M+ A P V + +L + + +A L+ G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+I+T N ++N LC + ++G GL T T T+++ C + A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G QP TF ++NGFC G E + M+ + PNA +N+++
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 80 HYAAAISLIKRAHS-------SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLR 132
H+ + IK AH G PD+ + + V+N C ++ ++ + GL+
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P + +I+ LC +A A M G P++ + +I+GFCK GD +A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
M R P+ + Y AI+ G
Sbjct: 374 FYEMHSRDITPDVLTYTAIISG 395
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + ++ AV + AA + +L ++ A ++K G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P I T N+++N C G +L + G+ P T N++V C+ NN+ +A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G P+ T+ ++ G CK + + A + M + + Y+ ++ G
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 80.5 bits (197), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 88/179 (49%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L A + F M+ P + +N L ++ + A+ L+ S
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD++T I+IN LC + A + + + P++AT N++++G C E N+ A+
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +G +PN TF +I+G+C + D ++A+ M + P+ V Y A++D
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 78/166 (46%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A + ++L A P V F +L + + A SL GV P++Y N +I+
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + +L + L P T ++NGLC+E+ VA A + M+N P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+S T+ ++I+G+CK + E A+ M EPN + ++ ++DG
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 80/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+LN + + D+ + M++ P V + LF + Y+ L+ S G
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++Y I I LC + + L+ K G+ P T + +++G C NV A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + A PN FG +++GFCK + +A +MV+ +PN VYN ++ G
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + A F +M FP +NSL + + A+ L +SG
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT---GLRPTTATLNTIVNGLCLENNVA 152
V P+I T + +I+ C++R + +GL F+ G+ P T +++ E N+
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIK---AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV-LCMRNMVERHCEPNAVVYNAI 211
A+ M AG PN +TF +++GF K G A+ N +R C N V + +
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW-NHVGFTCL 555
Query: 212 MDG 214
++G
Sbjct: 556 IEG 558
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 69/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A F M P + ++++ +T + A L K + + P++
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C R S+ + K G+ P N +++G C N+ AV ME+
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +T+ +ING C A + M P++ YN+++ G
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 71/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV +M + N P V + L + A A L ++ + + P T N +I+
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C L + + +G+ P T +T+++G C ++ +A+ M G P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ A+I+ K + + A+ +M+E PN + ++DG
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSS-GVAPDIYTLNIVINCLCHLRRTAFGLSVL 123
V+ N+L + + + + ++ K + S G+ P+I+T N+++ LC VL
Sbjct: 155 VRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 124 GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
+ GL P T TI+ G ++ SA M + G+ P++ T+ +++G+CK+
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G A M +M + EPN V Y ++
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 60 NPFPCVKDFNSLFTFVART----KHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
N +P +K +LF + R Y +++ + R GV + +LN ++N L +R
Sbjct: 111 NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQR 170
Query: 116 TAFGLSVLGLVFKT-----GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
++ +FK G+ P T N +V LC +N++ SA + + G PN
Sbjct: 171 ----FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNL 226
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ I+ G+ GD ESA + M++R P+A Y +MDG
Sbjct: 227 VTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDG 270
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 1/140 (0%)
Query: 75 VARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPT 134
+ + K A ++ PD VI+ LC + + + K P
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
A L+T+++ LC E V A E G P+ T+ +I G C+ G+ A
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 195 NMVERHCEPNAVVYNAIMDG 214
+M ER C+PNA YN +++G
Sbjct: 425 DMYERKCKPNAFTYNVLIEG 444
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 12/182 (6%)
Query: 40 IRSL---KTLDAAVAFFHQMLAANPFP----CVKDFNSLFTFVARTKHYAAAISLIKRAH 92
IR+L K A F +ML + P C K ++L A L ++
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL----CEDHKVDEACGLWRKML 358
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ PD L+ +I+ LC R + F+ G P+ T NT++ G+C + +
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFD-EFEKGSIPSLLTYNTLIAGMCEKGELT 417
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A M +PN++T+ +I G K G+ + V + M+E C PN + +
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 213 DG 214
+G
Sbjct: 478 EG 479
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAH--- 92
L+N++ +D A F +M P + +FT + I L+K ++
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPN----DVIFTTLIHGHSRNGEIDLMKESYQKM 371
Query: 93 -SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
S G+ PDI N ++N C +++ + + GLRP T T+++G C +V
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+A+ + M+ G + + F A++ G CK G A +R M+ +P+ V Y +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Query: 212 MD 213
MD
Sbjct: 492 MD 493
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+G ++Y NI++N C + V + K L+PT + NT++NG C N+
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
ME + +P+ +T+ A+IN CK + A M +R PN V++ ++
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 213 DG 214
G
Sbjct: 353 HG 354
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPC-VKDFNSLFTFVARTKHYAAAISLIKRAHS 93
+LL+ + L F+ ++L A FP V FN L + + + A +
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAG-FPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+ P + + N +IN C + G + + K+ RP T + ++N LC EN +
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M G PN F +I+G + G+ + + M+ + +P+ V+YN +++
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 214 G 214
G
Sbjct: 389 G 389
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L R A+ + K +G+ D + ++ +C R L +
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G++P T +++ C + + + + M++ G+ P+ T+ ++NG CK+G +
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A + + M+ P+ + YN +++G
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEG 564
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ L ++ F +ML + P V +NSL + + AIS+ + S+G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++ T N +IN C L + G V G PTT N +++ C +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME G P+ T+ +I G C+ G+ E+A + + P+ V ++ +M+G
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEG 479
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + + A++ +M++A P + +N+L + A+ + G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P N++I+ C L + G ++ + + G+ P T N ++ GLC N+ +A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + G P+ TF ++ G+C+ G++ A + ++ M + +P + YN +M G
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ L +D A +M P V +N L + R + AA L + S G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T +I++ C + +L + K GL+P T N ++ G C E N+ +A
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 156 TFTRHMENA-GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
ME + N ++ ++ G+ + G E A + + M+E+ PN + Y + +
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ +M+ P V FN + + +T A +++ G +P++ + N +I+ C
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 113 L---RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
L + +VL + + + P T N +++G ++N+ ++ + M + +PN
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ ++ING C G A+ MV +PN + YNA+++G
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING 375
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 73/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A A +M+ + P + FN L + + ++ + K V P++ + N +IN
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC+ + + +S+ + G++P T N ++NG C + + A+ ++ G P
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +I+ +CK+G + M P+ YN ++ G
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G + + + ++ L EN A + M QPN +TF +IN CK G A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M +M C PN V YN ++DG
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDG 267
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 77.0 bits (188), Expect = 9e-15, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 76/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A +M+A+ P V + +L + + A+ ++K G+APDI+ N
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I L +R S L + + GL+P T ++G + ASA + + M G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN +IN +CK G A R+MV++ +A Y +M+G
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Score = 74.3 bits (181), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 76/179 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + K +D A +F +M+ P + + + +A+A +K G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+ +IN C + S + G+ T ++NGL + V A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M G P+ +++G +INGF K+G+ + A MVE PN ++YN ++ G
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 58/131 (44%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A + + G+APD+++ ++IN L S+ + + GL P N ++
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G C + A M G PN+ T+ II+G+CK GD A M + P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 204 NAVVYNAIMDG 214
++ VY ++DG
Sbjct: 731 DSFVYTTLVDG 741
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +D A F +M P V + L ++ + A S+ G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ N+++ C +L + GL P T TI++G C ++A A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+ G P+S+ + +++G C++ D E A+ ++ C + +NA+++
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALIN 774
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 67/169 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A A F M+A+ P + + SL R K+ L+ + YT
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
V+ +C +++ + +G RP T++ + A+ + M+ G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ + + ++I G K + A + MVE +PNA Y A + G
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 13/180 (7%)
Query: 44 KTLDAAVAF--FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLI---KRAHSSGVAP 98
K+ D A AF F +M P + +L R AI++ K+ +S AP
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGL----RPTTATLNTIVNGLCLENNVASA 154
N +IN + +T VL + +P T N +++ LC E N+ +A
Sbjct: 769 ----FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+NA P T+ +++NG+ K+G + EP+ ++Y+ I++
Sbjct: 825 KELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884
Score = 50.4 bits (119), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 78/217 (35%), Gaps = 38/217 (17%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L + A + F +M+ P V +N L R+ A L+ G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ T +I+ C A + + GL P + T+V+G C N+V A+
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 156 T-----------------------------------FTRHMENAG---YQPNSYTFGAII 177
T R M+ + +PN T+ +I
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 178 NGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ CK G+ E+A M + P + Y ++++G
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 72/171 (42%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K LD A F +M+ P ++ L + AI +G+ PD+YT
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++I+ C RT G + ++P T N ++ C ++ A+ M++
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PNS T+ ++I G I E A L M EPN Y A++DG
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
FP N L T + R + GV+PD+Y IN C + +
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+ + + G+ P T NT+++GL + A F M G +P T+ ++ G
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ A ++ M ++ PN +VYN ++D
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + ++ ++ A+ F+ P V ++ + + + S
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+ N +I C R + L + + G+ P +AT +++ G+ + + V A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN + + A+I+G+ K+G +R M ++ PN + Y ++ G
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 63/144 (43%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
N+L + A + K G D + N +I+ C ++ L + K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
GL+P T + ++ GL N V A+ F + G P+ YT+ +I+G CK TE
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 189 AVLCMRNMVERHCEPNAVVYNAIM 212
M+ ++ +PN VVYN ++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLI 652
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ G+ P T NI++ L +V K G+ P T +N C V
Sbjct: 219 NKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVE 277
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
AV ME AG PN TF +I+G G + A + MVER EP + Y+ ++
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 213 DG 214
G
Sbjct: 338 KG 339
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 6/182 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKRAH 92
LL+ + LD A ++L CV D +N+L + K A +
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRG---CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
G+ PD YT +I+I L ++ + + + G+ P T + +++G C
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
F M + QPN+ + +I +C+ G A+ +M + PN+ Y +++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 213 DG 214
G
Sbjct: 688 KG 689
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D+A+ F +ML N P +L + + + ++ A+ L + + G D T N
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC + + + G + NT+++G C + + A F M G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVL----CMRNMVERHCEPNAVVYNAIMDG 214
+P++YT+ +I G + E A+ C RN + P+ Y+ ++DG
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM----LPDVYTYSVMIDG 619
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FF +M++ N P +N L R+ + A+ L + G++P+ T +I +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ R + + GL P +++G + R M + PN
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +I G+ + G+ A + M E+ P+++ Y + G
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 70/168 (41%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F +M+ P + ++ L + R K A ++K G P++ N +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ + + L+ GL T++T NT++ G C +A + M + G+
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N +F ++I C +SA+ + M+ R+ P + ++ G
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 75/180 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L++S +L+ A+ M++ +N+L + A L+K S
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G + + VI LC L +G + + P L T+++GLC + A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N G+ ++ T A+++G C+ G + A + ++ R C + V YN ++ G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 72/171 (42%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K LD A F +M+ P ++ L + AI +G+ PD+YT
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++I+ C RT G + ++P T N ++ C ++ A+ M++
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PNS T+ ++I G I E A L M EPN Y A++DG
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
FP N L T + R + GV+PD+Y IN C + +
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+ + + G+ P T NT+++GL + A F M G +P T+ ++ G
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ A ++ M ++ PN +VYN ++D
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + ++ ++ A+ F+ P V ++ + + + S
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+ N +I C R + L + + G+ P +AT +++ G+ + + V A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN + + A+I+G+ K+G +R M ++ PN + Y ++ G
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 63/144 (43%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
N+L + A + K G D + N +I+ C ++ L + K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
GL+P T + ++ GL N V A+ F + G P+ YT+ +I+G CK TE
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 189 AVLCMRNMVERHCEPNAVVYNAIM 212
M+ ++ +PN VVYN ++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLI 652
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ G+ P T NI++ L +V K G+ P T +N C V
Sbjct: 219 NKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVE 277
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
AV ME AG PN TF +I+G G + A + MVER EP + Y+ ++
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 213 DG 214
G
Sbjct: 338 KG 339
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 6/182 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKRAH 92
LL+ + LD A ++L CV D +N+L + K A +
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRG---CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
G+ PD YT +I+I L ++ + + + G+ P T + +++G C
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
F M + QPN+ + +I +C+ G A+ +M + PN+ Y +++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 213 DG 214
G
Sbjct: 688 KG 689
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D+A+ F +ML N P +L + + + ++ A+ L + + G D T N
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC + + + G + NT+++G C + + A F M G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVL----CMRNMVERHCEPNAVVYNAIMDG 214
+P++YT+ +I G + E A+ C RN + P+ Y+ ++DG
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM----LPDVYTYSVMIDG 619
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FF +M++ N P +N L R+ + A+ L + G++P+ T +I +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ R + + GL P +++G + R M + PN
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +I G+ + G+ A + M E+ P+++ Y + G
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 70/168 (41%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F +M+ P + ++ L + R K A ++K G P++ N +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ + + L+ GL T++T NT++ G C +A + M + G+
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N +F ++I C +SA+ + M+ R+ P + ++ G
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 75/180 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L++S +L+ A+ M++ +N+L + A L+K S
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G + + VI LC L +G + + P L T+++GLC + A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N G+ ++ T A+++G C+ G + A + ++ R C + V YN ++ G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A F +M P V +N L + + + A + +K +G PD+ T +I
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ LC R+ L + ++GL N +++GLC + A+T +ME+
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N T+ ++ GF K+GD+ A + M + +P+ + YN IM G
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Score = 67.0 bits (162), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
N+L + R A ++ +G P + + NI+I LC + + + + +
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
G +P T + ++ GLC + + A+ +G + + +I+G C +G +
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 189 AVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ M NM R+C N V YN +M+G
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEG 613
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P ++ +N+L K + SL ++GVAP++ T N++I C +
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L ++K G +P + +T++N L + A+ M G P+ + +I+GF K
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 183 IGDTESAV-LCMRNMVERHCEPNAVVYNAIMDG 214
D ++A+ L R + + PN +N ++ G
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISG 264
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 64/131 (48%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ +++ SSG D+Y +I+CLC +R +++ + K G+ + N ++
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
GL ++ + A F R M G +P ++ +I G CK G A ++ M+E +P
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 204 NAVVYNAIMDG 214
+ Y+ ++ G
Sbjct: 533 DLKTYSILLCG 543
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 84 AISLIKRAHSS-GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
A+ + KR G P I + N ++N ++ S+ G+ P T N ++
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
C + A F M G++P+ +++ +IN K G + A+ M ER
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 203 PNAVVYNAIMDG 214
P+ YN ++DG
Sbjct: 217 PDVTCYNILIDG 228
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 1/172 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K + A F M P V ++++ +A+ A+ L GVAPD+
Sbjct: 163 KEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCY 222
Query: 104 NIVINCLCHLRRTAFGLSVLG-LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
NI+I+ + + + L+ + + P T N +++GL V + M+
Sbjct: 223 NILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMK 282
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + YT+ ++I+G C G+ + A + ER + V YN ++ G
Sbjct: 283 QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRA-HSS 94
++N + LD A+ F +M P V +N L + K + A+ L R S
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
V P++ T NI+I+ L R L + + + T +++++GLC NV A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ + T+ ++ GFC+ G + ++ R M E N V YN ++ G
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKG 368
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN+ K + F A P ++ +N L + K + A + G
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+++ + VIN L + L + + + G+ P N +++G E + +A+
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 156 T-FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ R +E++ PN T +I+G K G + + M + E + Y++++ G
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 35/164 (21%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A AF +ML P +K ++ L + R + A+ L + SG+ D+ NI+I+
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 109 CLCHLRRTAFGLSVL-----------------------------------GLVFKTGLRP 133
LC + + ++V+ G ++K GL+P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 134 TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAII 177
+ NTI+ GLC+ V+ A+ F N G P YT+ ++
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ S+ ++ A+ ++ +ML A P K + +L + + + + AI ++++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D+ N++I C T +L + K G +P + T NT+++ + S
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM-VERHCEPNAVVYNAIMDG 214
M G P T+GA+I+ +C +G+ + A+ ++M + PN V+YN +++
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLA--ANPFPCVK----DFNSLFTFVARTKHYAAAISLIK 89
L+N++ + +D A+ F +M + +K FN+L + + A L+
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 90 RAH-SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
R AP+ T N +I+ C + V+ + + ++P T+NTIV G+C
Sbjct: 395 RMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ + AV F ME G + N T+ +I+ C + + E A+ M+E C P+A +Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 209 NAIMDG 214
A++ G
Sbjct: 515 YALISG 520
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL---- 123
FN+L + + R + L+ + + PD+ TL I+IN LC RR L V
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 124 GLVFKTG--LRPTTATLNTIVNGLCLENNVASAVTFTRHME-NAGYQPNSYTFGAIINGF 180
G G ++ + NT+++GLC + A M+ PN+ T+ +I+G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ G E+A + M E +PN V N I+ G
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Score = 60.8 bits (146), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL-GLV 126
+N+L +F + K + + ++++ G+ P + T VI+ C + L + +
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 127 FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
+ + P T N ++N N A++ M+ +PN T+ A+ +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMD 213
E+ + M MVE+ CEPN + +M+
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P +N L R A ++ R + P++ T+N ++ +C R ++V
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC--RHHGLNMAV 461
Query: 123 LGLV--FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+ + K G++ T T+++ C +NV A+ + M AG P++ + A+I+G
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
C++ A+ + + E + + YN ++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 3/169 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS-GVAPDIYTLNIVI 107
+V F M P V FNSL + + + A L + GV PD YT N +I
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLI 216
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM--ENAG 165
N C + + P T NTI++GLC V A M +
Sbjct: 217 NGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD 276
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN ++ ++ G+C + + AVL +M+ R +PNAV YN ++ G
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLNS+ + D F +M+ + +N L +++ A L+ G
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PDI+T N +I+ C LSV + ++G+ P T N+ ++G E + A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R +++ N T+ +I+G+C++ D + A+ M R P V YN+I+
Sbjct: 294 RLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L R A+ L + S G +P + T N ++ LC R +L +
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T NT++N C ++ SAV + M +G + + Y++ A+I+GFCK+ + E
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A + +M+E+ P Y+ ++DG
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDG 456
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 34/202 (16%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN-- 104
+ A +M FP + +N+L + + + A+S+ R SGVAP+I T N
Sbjct: 220 EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSF 279
Query: 105 --------------------------------IVINCLCHLRRTAFGLSVLGLVFKTGLR 132
+I+ C + L + ++ G
Sbjct: 280 IHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS 339
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P T N+I+ LC + + A M +P++ T +IN +CKI D SAV
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+ M+E + + Y A++ G
Sbjct: 400 KKKMIESGLKLDMYSYKALIHG 421
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 63/158 (39%)
Query: 57 LAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRT 116
++ +P F+ L + A+ +I + ++ S G+ P + +++N L R T
Sbjct: 125 VSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLT 184
Query: 117 AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAI 176
+ + K G+ N +V+ + A ME G P+ +T+ +
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 177 INGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I+ +CK A+ M PN V YN+ + G
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 81/175 (46%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
+RS + LD + F + + P V+ ++L + + +H+ A+ L S G+ PD
Sbjct: 167 VRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPD 226
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+Y VI LC L+ + ++ + TG N +++GLC + V AV +
Sbjct: 227 VYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKK 286
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +P+ T+ ++ G CK+ + E + M M+ P+ +++++G
Sbjct: 287 DLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Score = 71.6 bits (174), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ +H+M P + F +L + + R A+ L V P+ T N+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C + L + + G+ P T + +++GLCL + A F +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N + +++GFC+ G E A+ + MV+R + + V Y ++DG
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ +R ++ A+ +++ P + +N+L + + + + A L R G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ T +I+I+ C + LS LG + TGL+ + N+++NG C ++++A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F M N +P T+ +++ G+C G A+ M + P+ + ++ G
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 73/179 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S+ + A F +M P ++ L R A+S + +G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ +Y N +IN C + + + L PT T +++ G C + + A+
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P+ YTF +++G + G AV M E + +PN V YN +++G
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 76/178 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++ S+ LK L A M A + +N L + + + A+ + K
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T ++ LC ++ GL ++ + P+ A ++++V GL + A+
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + + G PN + + A+I+ CK A L M + PN V Y+ ++D
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
GL TAT N ++ G C + + A M G P+ T+ +IN C+ D + A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
+ +M E+ P+ V YN ++ G
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 43/105 (40%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L R A LI R GV+PD T +IN LC + + +
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ G+RP NT+++G C+ + A M G PN+ T
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 47/110 (42%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ + T N++I C R ++ + G+ P T T++N LC N+V A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
+ M G +P+ + +I+G C G+ A M+ + PN
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN-CLCHLRRTAFGLSVLGLV 126
+ L R A+S+ + GV D+ ++I+ L H R F +L +
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF-FGLLKEM 673
Query: 127 FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG-D 185
GL+P ++++ + A M N G PN T+ A+ING CK G
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMD 213
E+ VLC + M PN V Y +D
Sbjct: 734 NEAEVLCSK-MQPVSSVPNQVTYGCFLD 760
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + L A+ FF+QML P + +N++ +++ AI L+ ++
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P + T N VI+ L L + + G+ P T +++ G C N V A
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N G T+ +I G CK + E A+ + M+ C+P+ +Y AI+ G
Sbjct: 475 QVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A+ F+ L P + + L V R A AI +++ G PDI T N +
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+N C SV+ + GL T T NT+++ LC M Y
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P T+ +ING CK A+ M+E+ C P+ V YN ++
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L+ + + LD A+ M+ + P +N + + + H A+ L++ S
Sbjct: 144 NLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLS 203
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PD+ T N VI C+ + + G P T +V +C A A
Sbjct: 204 GSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARA 263
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G P+ T+ +++N C+ G+ E +++++ E N V YN ++
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+S+ S + D + M + P V +N L + + + + AI +
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T N V+ + + +LGL+ T P T N++++GL + + A+
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +AG P+ T ++I GFC+ E A ++ R Y ++ G
Sbjct: 440 ELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQG 498
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L+++ S L A M N P ++L +AR A+ +++ S
Sbjct: 109 EILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMS 168
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PD T N++I LC L +L + +G P T NT++ + N A
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ F + G P T+ ++ C+ + A+ + +M C P+ V YN++++
Sbjct: 229 IRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 64/147 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + +++ ++ + + P + T NI+IN LC R + + +
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T NT++ + E V A+ ++N P T+ ++I+G K G +
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ M++ P+ + +++ G
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYG 463
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 74.3 bits (181), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ + +D A + M++ P ++ L + H A A + S
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P + N +I C + G S L + G P + NT++ G E N++ A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 156 TFTRHME--NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ME G P+ +T+ +I++GFC+ + A + +R M+ER P+ Y +++
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 214 G 214
G
Sbjct: 701 G 701
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M + + P + F+S+ + R+ + A+ +G+ PD I+I C
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ +++ + + G T NTI++GLC + A M P+SYT
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I+G CK+G+ ++A+ + M E+ + V YN ++DG
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N++ S L A + +M++ N P V NS+ R+ + + S +++ S G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 96 VAPDIYTLNIVINCLCHLRRT--AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
PD + N +I AFGL + GL P T N+I++G C +N +
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
A R M G P+ T+ +INGF + A M++R P+
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 79/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N++ ++ F Q+ +P + +N+L + + A L+ G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P +YT N VIN LC + V + ++GL P + T +++ C + +V
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + P+ F ++++ F + G+ + A++ ++ E P+ V+Y ++ G
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 78/169 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A+ +F+ + A P + L R + A++L G A D+ T N
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC + + + + L P + TL +++G C N+ +A+ + M+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + T+ +++GF K+GD ++A +MV + P + Y+ +++
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAH-------SSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
+S+F + RT Y A L + AH S G I N +I L +
Sbjct: 165 DSVFDLLIRT--YVQARKL-REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
V + ++G+ TLN +VN LC + + TF ++ G P+ T+ +I+ +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G E A M M + P YN +++G
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 70/169 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A+ ++ML V +N++ + + K A L + PD YTL I
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C L + + + + +R T NT+++G ++ +A M +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P ++ ++N C G A M+ ++ +P ++ N+++ G
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F +M FP V +N + + ++ A L++ + PDI T + +IN
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
R+ + + + + + PTT T N++++G C ++ V A M + G P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ TF +ING+CK ++ + M R N V Y ++ G
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N+ + + A + +ML + FP +NS+ + A ++ S G
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PD+ T + +IN C +R G+ + + + G+ T T T+++G C ++ +A
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
M + G P+ TF ++ G C + A + ++
Sbjct: 206 DLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 74.3 bits (181), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+S ++ A A + KR G++P++ T I+I LC R + G +
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K G+ P+ T +++++G C N+ S M GY P+ +G +++G K G
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ M+ + N VV+N+++DG
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
PDI T N +I C LRR + L+ T P T TL +++ LC N++ A+
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN+ T+G +++ F K D E + M E+ P+ V Y+ I+DG
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 6/177 (3%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFV----ARTKHYAAAI--SLIKRAHSSGV 96
L D A+ F M P V F ++ A KH I L + +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
+ DI N+VI+ L R + + + P T NT++ G C + A
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ + PN+ T +I+ CK D + A+ M E+ +PNAV Y +MD
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 69/173 (39%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
S+ ++ A +L P P V F +L + A L K G+ PD+
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
+ +I+ G + G++ ++ ++ ++A+A + M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN T+ +I G C+ G A +++R EP+ V Y++++DG
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 69/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A FF+ ++ P + +N++ + A + + + P+ TL I
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC + + ++ + G +P T +++ ++ + M+ G
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ ++ II+G CK G + A ++ P+ V Y ++ G
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 2/173 (1%)
Query: 42 SLKTLDAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
SL+ LD A F ++L PF P L + + AI + G P+
Sbjct: 619 SLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T +++ + + + G+ P+ + + I++GLC V A
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+A P+ + +I G+CK+G A L +M+ +P+ ++ A+ +
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 790
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 74.3 bits (181), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+S ++ A A + KR G++P++ T I+I LC R + G +
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K G+ P+ T +++++G C N+ S M GY P+ +G +++G K G
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ M+ + N VV+N+++DG
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
PDI T N +I C LRR + L+ T P T TL +++ LC N++ A+
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN+ T+G +++ F K D E + M E+ P+ V Y+ I+DG
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Score = 57.0 bits (136), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 67/168 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A+ F +M P + +L + + L + ++ DI N+
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
VI+ L R + + + P T NT++ G C + A ++
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ PN+ T +I+ CK D + A+ M E+ +PNAV Y +MD
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 69/173 (39%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
S+ ++ A +L P P V F +L + A L K G+ PD+
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
+ +I+ G + G++ ++ ++ ++A+A + M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN T+ +I G C+ G A +++R EP+ V Y++++DG
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 69/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A FF+ ++ P + +N++ + A + + + P+ TL I
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC + + ++ + G +P T +++ ++ + M+ G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ ++ II+G CK G + A ++ P+ V Y ++ G
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 2/173 (1%)
Query: 42 SLKTLDAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
SL+ LD A F ++L PF P L + + AI + G P+
Sbjct: 648 SLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T +++ + + + G+ P+ + + I++GLC V A
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+A P+ + +I G+CK+G A L +M+ +P+ ++ A+ +
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 74.3 bits (181), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 59 ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAF 118
AN F C N++ +++ + A L+ + S G+ P++ + N V+ C +
Sbjct: 441 ANVFVC----NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Query: 119 GLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIIN 178
V + + GL+P T + +++G ++ +A+ HM ++ + N + IIN
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 179 GFCKIGDTESAVLCMRNMVE--RHCEPNAVVYNAIMDG 214
G CK+G T A + NM+E R C + + YN+I+DG
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSIIDG 593
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G+ P T +++NGLC N + A+ M+N G + + +GA+I+GFCK + ESA
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
++E P+ +YN+++ G
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISG 698
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 73/179 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +D A+ +M + + +L + + +A +L G
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P N +I+ +L L + + K GLR T T+++GL + N+ A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ G P+ + I+NG K G V M + + PN ++YNA++ G
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 71/179 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +++A A F ++L P +NSL + + AA+ L K+ G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D+ T +I+ L + + GL P IVNGL + V
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ PN + A+I G + G+ + A M+++ P+ ++ ++ G
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 50.8 bits (120), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS+ + +A++ + +G++P++ T ++N LC R L + +
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G++ +++G C +N+ SA + G P+ + ++I+GF +G+
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A+ + M++ + Y ++DG
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDG 733
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P F + + + + +++ GV + T NI+I CLC +++A ++
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ V +RP + T + +++G C E N+ A+ M GY+P+S + +I+ CK
Sbjct: 275 IDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GD E+A++ R +E++ P+ V +++G
Sbjct: 335 GGDFETALILCRESMEKNWVPSFSVMKWLVNG 366
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISL-IKRAHSSGVAPDIYTLN 104
LD ++ F + VK N+L K Y A + ++ G+ PD+ T N
Sbjct: 127 LDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYN 186
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+I LC T+ S++ + + ++PT A+ +++G E R M+
Sbjct: 187 RMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEF 246
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G T+ +I CK + A + ++ PN+V Y+ ++ G
Sbjct: 247 GVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 73.6 bits (179), Expect = 8e-14, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L A F ML P +N L + AA +L KR G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD+ T +++++CLC + R GL + ++GL P N I+NGL + + A+
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 156 TFTRHMENA-GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ + G P+ YT+ ++I G E A + EPN +NA++ G
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++++ + + LD A F +M P + +L + + + G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T I+++ LC L ++ G+ P T NT++ GL + + A+
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
+ME+ G +P +YT+ I+ + K GD+ SA+ M + PN V NA
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N + ++ AI L+ +G PD+ +N +IN L R + +
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ L+PT T NT++ GL + A+ M G PN+ TF + + CK +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ + M++ C P+ YN I+ G
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFG 652
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ +D+ + +M P V F + R A ++KR G PD+ T
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGL-RPTTATLNTIVNGLCLENNVASAVTFTRHME 162
++I+ LC R+ V + KTG +P T T+++ ++ S F ME
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ P+ TF +++ CK G+ A + M ++ PN YN ++ G
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Score = 60.5 bits (145), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N++ +D A F +M P V +N+L + + AI L + G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+ T N + +CLC L +L + G P T NTI+ GL V A+
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMV 197
F M+ Y P+ T ++ G K E A + N +
Sbjct: 664 CFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 69/166 (41%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
+A+ F +M P + N+ +A+ A + G+ PD T N+++
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
C + + +L + + G P +N+++N L + V A M+ +
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P T+ ++ G K G + A+ MV++ C PN + +N + D
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 35/213 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ + LD+ F+ +M P V F L + + ++ A + G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+++T N +I L + R L + G + G++PT T ++ + SA+
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 156 TFTRHMENAGYQPN-----------------------------------SYTFGAIINGF 180
M+ G PN S T+ ++ +
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
K+G+ + A+ + M+E CEP+ +V N++++
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 88 IKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCL 147
+++ G + Y+ N +I+ L R + V + G RP+ T ++++ GL
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVV 207
++ S + + ME G +PN YTF I + G A ++ M + C P+ V
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 208 YNAIMDG 214
Y ++D
Sbjct: 296 YTVLIDA 302
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + ++ A F Q+ + P V +N L ++ L K +
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
+ T NIVI+ L L + L+ PT T +++GL + A
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M + G +PN + +INGF K G+ ++A + MV+ P+ Y+ ++D
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 70/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ + +M+ P ++ ++SL + + + + + L+K + G+ P++YT I I
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L + +L + G P T +++ LC + A M+ ++P
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ +++ F D +S M + P+ V + ++D
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 1/153 (0%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N L + A + + S+G PD+ T N +++ + +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT-FTRHMENAGYQPNSYTFGAIINGFC 181
+ T T N +++GL NV A+ + M + + P + T+G +I+G
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
K G A M++ C PN +YN +++G
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 63/169 (37%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A+ F M + P + + ++ +A+ ++ + G+AP+I N
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+ L R + + GL P + T N ++ + A+ M G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ ++IN K + A M E +P V YN ++ G
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ S+ ++ A+ ++ +ML A P K + +L + + + + AI ++++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D+ N++I C +L + K G +P + T NT+++ + S
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM-VERHCEPNAVVYNAIMDG 214
M G P T+GA+I+ +C +G+ + A+ ++M + PN V+YN +++
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLA--ANPFPCVK----DFNSLFTFVARTKHYAAAISLIK 89
L+N++ + +D A+ F QM + +K FN+L + + A L+
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 90 RAH-SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
R P+ T N +I+ C + V+ + + ++P T+NTIV G+C
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ + AV F ME G + N T+ +I+ C + + E A+ M+E C P+A +Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 209 NAIMDG 214
A++ G
Sbjct: 515 YALISG 520
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL---- 123
FN+L + + R + L+ + + PD+ TL I+IN LC RR L V
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 124 GLVFKTG--LRPTTATLNTIVNGLCLENNVASAVTFTRHME-NAGYQPNSYTFGAIINGF 180
G G ++ + NT+++GLC + A M+ PN+ T+ +I+G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ G E+A + M E +PN V N I+ G
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Score = 60.8 bits (146), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL-GLV 126
+N+L +F + K + + ++++ G+ P + T VI+ C + L + +
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 127 FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
+ + P T N ++N N A++ M+ +PN T+ A+ +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMD 213
E+ + M MVE+ CEPN + +M+
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P +N L R A ++ R + P++ T+N ++ +C R ++V
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC--RHHGLNMAV 461
Query: 123 LGLV--FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+ + K G++ T T+++ C +NV A+ + M AG P++ + A+I+G
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
C++ A+ + + E + + YN ++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ S+ ++ A+ ++ +ML A P K + +L + + + + AI ++++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D+ N++I C +L + K G +P + T NT+++ + S
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM-VERHCEPNAVVYNAIMDG 214
M G P T+GA+I+ +C +G+ + A+ ++M + PN V+YN +++
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLA--ANPFPCVK----DFNSLFTFVARTKHYAAAISLIK 89
L+N++ + +D A+ F QM + +K FN+L + + A L+
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 90 RAH-SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
R P+ T N +I+ C + V+ + + ++P T+NTIV G+C
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ + AV F ME G + N T+ +I+ C + + E A+ M+E C P+A +Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 209 NAIMDG 214
A++ G
Sbjct: 515 YALISG 520
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL---- 123
FN+L + + R + L+ + + PD+ TL I+IN LC RR L V
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 124 GLVFKTG--LRPTTATLNTIVNGLCLENNVASAVTFTRHME-NAGYQPNSYTFGAIINGF 180
G G ++ + NT+++GLC + A M+ PN+ T+ +I+G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ G E+A + M E +PN V N I+ G
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P +N L R A ++ R + P++ T+N ++ +C R ++V
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC--RHHGLNMAV 461
Query: 123 LGLV--FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+ + K G++ T T+++ C +NV A+ + M AG P++ + A+I+G
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
C++ A+ + + E + + YN ++
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A A +M A P V +NSL + A+ + L SG++PD+++ N
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 106 VINCLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+++C L R +L + GL P T N +++ LC + +A+ +H+++
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P T+ +ING CK S MR + + PNAV Y ++
Sbjct: 184 -VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML 230
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
L+ + F +ML + P + +N+L + + +H A L + H +G+ P I T N
Sbjct: 99 LNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYN 158
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+++ LC T + + + K+ ++P T N ++NGLC V S R ++ +
Sbjct: 159 ILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKS 217
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAV 190
GY PN+ T+ ++ + K E +
Sbjct: 218 GYTPNAVTYTTMLKMYFKTKRIEKGL 243
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + + A L++ G+ PD YT I++N L ++ T L +
Sbjct: 297 YNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIG 356
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G++P+ T N +++GLC +V A+ ME + +T+ ++++ CK G
Sbjct: 357 EMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDG 409
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Query: 98 PDIYT--LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P I T LNI +N LC R ++L + G+ P T NT++ G + A
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
TR M AG +P+ T+ ++I+G K + M+ P+ YN +M
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLM 125
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 73/180 (40%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + + + ++ + P + ++ +TK + L + G
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTT-ATLNTIVNGLCLENNVASA 154
D + V++ L R + + ++G R + NT++N + N+ +
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAV 313
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+E G +P+ YT I+NG IG+T A + + E +P+ V N ++DG
Sbjct: 314 DDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDG 373
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL + + D AV +++ P + +N L T + A++L + + G
Sbjct: 217 LLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ + NI++ CLC R S+L + P+ T N ++N L A+
Sbjct: 277 FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAL 336
Query: 156 TFTRHMENAGYQ--PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ M +Q + ++ +I CK G + V C+ M+ R C+PN YNAI
Sbjct: 337 QVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V L + + AI +I+ SSG+ PD ++N LC + + +
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G T T N +V GLC+ ++ ++ F + G PN++T+ ++ K
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ AV + ++ + EPN V YN ++ G
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTG 255
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ G P++ ++ LC R + V+ L+ +G+ P + +VN LC NV
Sbjct: 99 TGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 158
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A+ ME+ GY N+ T+ A++ G C +G ++ + ++++ PNA Y+ ++
Sbjct: 159 YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Query: 213 D 213
+
Sbjct: 219 E 219
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 73/178 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
LL + L A+ M+++ P + L + + + A+ L+++
Sbjct: 111 QLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDH 170
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G + T N ++ LC L L + + + GL P T + ++ E A
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
V + G +PN ++ ++ GFCK G T+ A+ R + + + N V YN ++
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA- 164
VI LC T +L + + G P T + ++ GLCLE A+ ME +
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESE 488
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P F A+I G CKI T+ A+ MVE+ PN Y +++G
Sbjct: 489 NCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 56/130 (43%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
++ ++R G+AP+ +T + ++ R T + +L + G P + N ++
Sbjct: 195 SLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLT 254
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G C E A+ R + G++ N ++ ++ C G E A + M P
Sbjct: 255 GFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAP 314
Query: 204 NAVVYNAIMD 213
+ V YN +++
Sbjct: 315 SVVTYNILIN 324
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+ LF + + AA+ + + A SGV + YT +I++N LC + +LG
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
GL P NT+++G C + ++ A ME G +P+ + +I FC++G+ E
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A + M + P+ YN ++ G
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGG 468
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 65/152 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V+ +N L R + ++K +G P++ + +INCLC + V
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G+ P N +++G C + + A F++ M G + N T+ +I+G
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A + + + +P+ YN+++ G
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 71/179 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN++ ++ A + +A P +N++ R A I+ G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD N +I C L + + G+ P+ T N ++ G +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ME+ G PN ++G +IN CK A + R+M +R P +YN ++DG
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Score = 60.8 bits (146), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 88 IKRAHSSGVAPDIYTLNIVINCLCHLRRTAFG--LSVLGLVFKTGLRPTTATLNTIVNGL 145
+ + GV+P + T NI+I + R+ F +L + G P + T++N L
Sbjct: 447 VNKMKLKGVSPSVETYNILIGG--YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
C + + A R ME+ G P + +I+G C G E A + M+++ E N
Sbjct: 505 CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564
Query: 206 VVYNAIMDG 214
V YN ++DG
Sbjct: 565 VTYNTLIDG 573
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + K ++ A F +MLA P + +N+L + + + + +R +
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P + T N ++ L +VL + G P T + + +G +A+
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++G + N+YT ++N CK G E A + + + PN V+YN ++DG
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 70/158 (44%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+M A + P + FN+L + + A +++K G PD +T +I+ +
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
+ L V +G++ T + ++N LC E + A G PN +
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+I+G+C+ GD A + + M ++ +P+ + YN ++
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Score = 57.8 bits (138), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 64/171 (37%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K + A F + +P L + +TK + I++ S P +
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
I L GL + + + P+ N +++GLC + A M
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ +I+G+CK G+ E + M H EP+ + +N ++ G
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 66/167 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D +M P V + +L + + A + + GV+P + N+
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C + + K G+ T NT+++GL + ++ A + G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ +T+ ++I+G+ G+ + + M +P Y+ ++
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 39 SIRSL---KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS- 94
++RSL +D A ++ + P +N L + + K +
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 95 GVAPDIYTLNIVINCLCH---LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
V PD+ + I+I+ +C+ LR + +S LG G +P NTI+ G C +
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG---NAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ AV + M+ G +P+ T+ +I G K G E A + ++ MV+ EP+ Y ++
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 212 MDG 214
M+G
Sbjct: 342 MNG 344
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + F L V +K+ A+ L+ + ++G PD + N ++ C L + + + V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G+ P T NT++ GL V A + + M +AGY+P++ T+ +++NG C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 183 IG 184
G
Sbjct: 348 KG 349
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFP-CVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
++ +R LK ++ A+ +F P C + +NSL +AR +++ A ++ +
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 95 GVAPDIYT-LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
G P + T + +V+ C+ + G V+ ++ K RP + T++ N+
Sbjct: 128 GFGPSVNTCIEMVLGCV-KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDM 186
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+T + M+ GY+P + F +I GF K G +SA+ + M + + V+YN +D
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246
Score = 71.6 bits (174), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD AV F + PC +N++ + A SL++R + G P + N
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ CL + + L V + K P +T N +++ LC + +A M+ AG
Sbjct: 349 ILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T +++ CK + A M + C P+ + + +++DG
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
S D A + + A P V +N + T + + A+ + + AP++
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLS 378
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T NI+I+ LC + + + K GL P T+N +V+ LC + A M
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ P+ TF ++I+G K+G + A M++ C N++VY +++
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 72/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + ++ D + F QM P V F +L A+ +A+SL+ SS
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ DI N+ I+ + + + GL+P T +++ LC N + AV
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
H+E P +Y + +I G+ G + A + + P+ + YN I+
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ + + LD A F + + V ++SL + A +++ G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++YT N +++ L L + + P T ++NGLC A
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F + M+ G +P++ ++ +I+G K G+ A P++ YNA+++G
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A +M P V + S+ +A+ A L + A S + ++ +
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ + R +L + + GL P T N++++ L + A+ + M+
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+G +ING CK+ A + + M ++ +P+ + Y ++ G
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 68/164 (41%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
A F ++ A P + ++ L + + L G D NIVI+
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C + +L + G PT T ++++GL + + A ++ + N
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++I+GF K+G + A L + ++++ PN +N+++D
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 70/165 (42%), Gaps = 6/165 (3%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ M+ N P ++ N+ + + ++ + + PD + +I+I+ L
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI- 563
Query: 113 LRRTAFGLSVLGLVF---KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
+ F L + + G T N +++G C V A M+ G++P
Sbjct: 564 --KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+G++I+G KI + A + + E N V+Y++++DG
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 81/169 (47%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ L+ AV F + P V FNS+ + + A S G+ P +Y+
Sbjct: 201 QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSH 260
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+IN LC + A L + + K G+ P + T N + G L ++ A R M +
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G P+ T+ ++ G C++G+ + ++ +++M+ R E N+++ ++M
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Score = 70.9 bits (172), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 71/147 (48%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
++++ + R + A+ ++ + + P + + N +++ C L S V
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K GL P+ + N ++NGLCL ++A A+ M G +P+S T+ + GF +G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A +R+M+++ P+ + Y ++ G
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCG 336
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ + L D A+ + +M P + +L + + A SL+ SSG
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
DI NIVI+ L + +V +TG+ P+ AT N+++ G C N+A A
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ G P+ ++ +++ + G+T+S R M P V Y+ I G
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 5/183 (2%)
Query: 37 LNSIRS----LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAH 92
NSI S L +D A +FF +L P V N L + A A+ L +
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
GV PD T NI+ L + V+ + GL P T ++ G C N+
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 153 SAVTFTRHMENAGYQPNSYT-FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ + M + G++ NS +++G CK G + A+ M P+ V Y+ +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 212 MDG 214
+ G
Sbjct: 405 IHG 407
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ F ++ P V FNSL +T++ A A ++ G+AP + +
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE------NNVASAVTFT- 158
+++ + T + + G+ PT T + I GLC N+V F
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 159 -----RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R ME+ G P+ T+ II C++ A + + M R+ + ++ YN ++D
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 62/139 (44%)
Query: 75 VARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPT 134
V R + + ++ S G+ PD T N +I LC ++ + L ++ L +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
+AT N +++ LC+ + A +F ++ + + + +I C GD E AV
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 195 NMVERHCEPNAVVYNAIMD 213
++ R + Y+A+++
Sbjct: 715 QLLHRGFNVSIRDYSAVIN 733
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 43 LKTLDAAVAFFHQMLAA-----NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA 97
L +D + ML+ + PC + + + + +T A+SL + + G++
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPC----SVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
PD+ +IVI+ LC L + L + + + P + T ++ GLC + + A +
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++G + + +I+G+ K G E A+ + ++E P+ +N+++ G
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 48 AAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
+A + A++ F C D FNSLF ++ K + +P++ T +
Sbjct: 109 SASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG-VMLKCCSPNVVTYS 167
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+ C L + + L P T +++G C ++ AV+ + M
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N T+ A+I+GFCK G+ + A MVE EPN++VY I+DG
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ + R S PD +T N I+ L + L L + G P ++ N++V+
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVS 64
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH--- 200
+C V A M G +P+ ++ ++I+G C+ GD SA L + ++ H
Sbjct: 65 FVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFI 124
Query: 201 CEPNAVVYNAIMDG 214
C+P+ V +N++ +G
Sbjct: 125 CKPDIVSFNSLFNG 138
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 66/169 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ AV+ + +M V + +L + A + R V P+
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ + + L + G+R I++GLC + A ME +
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ F ++N + K G ++AV ++ER EP+ V + ++DG
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 75/203 (36%), Gaps = 37/203 (18%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
++ F +++ P FNS+ +FV + A ++ G PD+ + N +I+
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 109 CLCH---LRRTAFGLSVL----GLVFKTGL------------------------------ 131
C +R + L L G + K +
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCC 159
Query: 132 RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVL 191
P T +T ++ C + A+ M+ PN TF +I+G+CK GD E AV
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 192 CMRNMVERHCEPNAVVYNAIMDG 214
+ M N V Y A++DG
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDG 242
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N +K LD + ML P V +++ ++ A+
Sbjct: 135 LFNGFSKMKMLDEVFVYMGVMLKCCS-PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA 193
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++P++ T +I+ C +S+ + + + T +++G C + + A
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +PNS + II+GF + GD+++A+ + M+ + + Y I+ G
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 72.0 bits (175), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 81/169 (47%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ L+ AV F + P V FNS+ + + A S G+ P +Y+
Sbjct: 201 QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSH 260
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+IN LC + A L + + K G+ P + T N + G L ++ A R M +
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G P+ T+ ++ G C++G+ + ++ +++M+ R E N+++ ++M
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Score = 70.5 bits (171), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 71/147 (48%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
++++ + R + A+ ++ + + P + + N +++ C L S V
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K GL P+ + N ++NGLCL ++A A+ M G +P+S T+ + GF +G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A +R+M+++ P+ + Y ++ G
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCG 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ + L D A+ + +M P + +L + + A SL+ SSG
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
DI NIVI+ L + +V +TG+ P+ AT N+++ G C N+A A
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ G P+ ++ +++ + G+T+S R M P V Y+ I G
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 5/183 (2%)
Query: 37 LNSIRS----LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAH 92
NSI S L +D A +FF +L P V N L + A A+ L +
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
GV PD T NI+ L + V+ + GL P T ++ G C N+
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 153 SAVTFTRHMENAGYQPNSYT-FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ + M + G++ NS +++G CK G + A+ M P+ V Y+ +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 212 MDG 214
+ G
Sbjct: 405 IHG 407
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ F ++ P V FNSL +T++ A A ++ G+AP + +
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE------NNVASAVTFT- 158
+++ + T + + G+ PT T + I GLC N+V F
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 159 -----RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R ME+ G P+ T+ II C++ A + + M R+ + ++ YN ++D
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Score = 53.9 bits (128), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 62/139 (44%)
Query: 75 VARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPT 134
V R + + ++ S G+ PD T N +I LC ++ + L ++ L +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
+AT N +++ LC+ + A +F ++ + + + +I C GD E AV
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 195 NMVERHCEPNAVVYNAIMD 213
++ R + Y+A+++
Sbjct: 715 QLLHRGFNVSIRDYSAVIN 733
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 43 LKTLDAAVAFFHQMLAA-----NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA 97
L +D + ML+ + PC + + + + +T A+SL + + G++
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPC----SVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
PD+ +IVI+ LC L + L + + + P + T ++ GLC + + A +
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++G + + +I+G+ K G E A+ + ++E P+ +N+++ G
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 72.0 bits (175), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + L+ A QM P + + L + A +L G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+++T ++I+ LC + V + K + P+ T N ++NG C + V A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME +PN TF ++ G C++G AV ++ M++ P+ V YN ++DG
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+M+ FP V +N+L + A L+ P++ T N ++ LC +
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
+ + +L + GL P + N +++GLC E ++ +A M +P+ TF
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
AIIN FCK G + A + M+ + + V ++DG
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A F +M+ P V + L + R A + ++ + P + T N
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN C R +L ++ K +P T N ++ GLC AV + M + G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ ++ +I+G C+ G +A + +M EP+ + + AI++
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
++LN++++ L + L++LG + K GL P+ T T+V+GL ++ +
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ +G PN Y + IING C+ G E A + M + PN V Y ++ G
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 97 APDIYTLNIVINCLCHLRR--TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
AP+ + +I+I+ LC + R AFGL + + G +P+T T ++ LC + A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLK--DQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN +T+ +I+G C+ G E A R MV+ P+ + YNA+++G
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
N + +++ ++++ + + G+ P + T +++ L +L L+
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+G P I+NGLC V A M+++G PN T+ ++ G+ G +
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ +R MVER E N +Y++++ G
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLQG 695
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 72/201 (35%), Gaps = 35/201 (17%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV +ML P + +N L + R H A L+ + + PD T +IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC-----------LENNVASAVTF 157
C + + LGL+ + G+ T T+++G+C LE V +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 158 TRHMENA------------------------GYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T H N G P+ T+ +++G + GD + +
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 194 RNMVERHCEPNAVVYNAIMDG 214
M C PN Y I++G
Sbjct: 605 ELMKLSGCLPNVYPYTIIING 625
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + +L + R+ + +++ SG P++Y I+IN LC R +
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
L + +G+ P T +V G + A+ R M GY+ N + +++ GF
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 39/189 (20%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC---------- 111
+PC ++SL +A+ A +R + G + ++N LC
Sbjct: 160 YPC---YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEM 216
Query: 112 ---HLRRTAF------GLSVL-----GLVFKTGLR------------PTTATLNTIVNGL 145
+ + F G S+L GL + L+ P + + + +++GL
Sbjct: 217 FMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGL 276
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
C + A M G QP++ T+ +I C G + A M+ R C+PN
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336
Query: 206 VVYNAIMDG 214
Y ++DG
Sbjct: 337 HTYTVLIDG 345
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+DAA +F M P V +N++ R K+ A S+ G+ P+ +T +I
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM-ENA 164
+I+ + V+ + + NTI+NGLC + A +++ +
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
Y + ++ +II+GF K+GDT+SAV R M E PN V + ++++G
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 47 DAAVAFFHQMLA---ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+AA+ F+ A+ F C N +F + AA S +K G+ P++
Sbjct: 432 EAALEIFNDSFESWIAHGFMC----NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFY 487
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N ++ C ++ S+ + + GL P T + +++G + +A M
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMV-ERHCEPNAVVYNAIMDG 214
+ ++ N + IING CK+G T A ++N++ E+ + YN+I+DG
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K +D A + F +ML P ++ L + K A +I + ++S +
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 103 LNIVINCLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
N +IN LC + +T+ +L L+ + + + N+I++G + SAV R M
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN TF ++INGFCK + A+ M + + Y A++DG
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDG 669
Score = 57.8 bits (138), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 64/147 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS+ + +A+ + +G +P++ T +IN C R L + +
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
L+ +++G C +N++ +A T + G PN + ++I+GF +G +
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A+ + MV + Y ++DG
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDG 739
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 65/169 (38%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A F ++ P V +NSL + AAI L K+ + G++ D++T
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ L + + G+ P +VNGL + A M+
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN + +I G + G+ A M+E+ + V+N ++ G
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L R + A+ + + P + T N +I LCH +T + +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
++GL P +T N+I+ G C E V A F ++P++YT ++NG CK G TE
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIM 212
A+ ++E E + V YN ++
Sbjct: 609 KALNFFNTLIEER-EVDTVTYNTMI 632
Score = 60.5 bits (145), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ ++ A+ + +M P V FNSL + A+ SG+ PD T
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +I C R K +P T N ++NGLC E A+ F +
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ ++ T+ +I+ FCK + A + M E+ EP+ YN+ +
Sbjct: 620 E-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 1/171 (0%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS-GVAPDIYTL 103
++ +A F M+ V+ FN L A+ +++R S V PD T
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N ++ + R + +L + K GL P T N +V G C ++ A M+
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ +ING C G + M M +P+ V YN ++DG
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + A +++ + V PD+ T NI+IN LC+ GL ++ +
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 128 KTGLRPTTATLNTIVNGLCLENNVA-SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
L+P T NT+++G C E ++ A MEN G + N T + CK
Sbjct: 338 SLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 187 ESAVLCMRNMVERH-CEPNAVVYNAIM 212
E+ ++ +V+ H P+ V Y+ ++
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLI 423
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 65/152 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +++L + + A+ +++ G+ + TLN +++ LC R+ ++
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L K G T T++ G E V A+ M+ P TF ++I G C
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G TE A+ + E P+ +N+I+ G
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 63/147 (42%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
N++ + + + A +L+ AH G D T +I + L + +
Sbjct: 454 LNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMK 513
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K + PT +T N+++ GLC A+ + +G P+ TF +II G+CK G E
Sbjct: 514 KVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A ++ +P+ N +++G
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNG 600
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G +PDI T + +I + + L ++ + + G++ T TLNTI++ LC E + A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ + T+G +I GF + E A+ M + P +N+++ G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 64/142 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ +++ + L+ +G+ P+ T N ++ C L ++ L+
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+T + P T N ++NGLC ++ + M++ QP+ T+ +I+G ++G +
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362
Query: 188 SAVLCMRNMVERHCEPNAVVYN 209
A M M + N V +N
Sbjct: 363 EARKLMEQMENDGVKANQVTHN 384
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A+ F ++ + P FNS+ + A + PD YT NI+
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+N LC T L+ + + T T NT+++ C + + A ME G
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 167 QPNSYTFGAIIN 178
+P+ +T+ + I+
Sbjct: 657 EPDRFTYNSFIS 668
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 62/153 (40%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
+P K FN + + K + + A GV D LNI+I LC L
Sbjct: 164 WPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQ 223
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+L + RP T + ++ G C + A ME +P++ TF +I+G
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
K G E + + M + CEPN Y ++ G
Sbjct: 284 KKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+AA+ + P V F+ L + A L++R + PD T NI
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ L R G+ +L + G P T ++ GL + A M + G
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ ++ ++ G C+ +R MV P +++ ++
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 64/162 (39%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
H M+A N FP + + + + K A + K G APD +I C
Sbjct: 271 LHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCE 330
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ + K G+RP N +++G ++ F M GY +
Sbjct: 331 KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLS 390
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I GFC G ++ A +NM E PNA+ YNA++ G
Sbjct: 391 CNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKG 432
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%)
Query: 82 AAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTI 141
+ L+K+ G+ P Y +I+ C + A VL + P+ I
Sbjct: 230 SEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKI 289
Query: 142 VNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
+ GLC+ A +++++ GY P+ + +I GFC+ G SA M+++
Sbjct: 290 IKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGM 349
Query: 202 EPNAVVYNAIMDG 214
PN YN ++ G
Sbjct: 350 RPNEFAYNVMIHG 362
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ +F +M+ P + +F SL + + A +++ +G P++YT
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 106 VINCLCHLRRT--AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+ LC T AF L L LV +P T +++ G C E+ + A M+
Sbjct: 328 LIDGLCKRGWTEKAFRL-FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G PN T+ +ING CK G A M M + PN YNA +D
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 75/204 (36%), Gaps = 35/204 (17%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A F +M FP V + +L + + A L+ G P+IYT N
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
I+ LC R +L F GL T ++ C +N++ A+ F M G
Sbjct: 434 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Query: 166 YQ-----------------------------------PNSYTFGAIINGFCKIGDTESAV 190
++ P T+ ++I+ +CK GD + A+
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 553
Query: 191 LCMRNMVERHCEPNAVVYNAIMDG 214
NM C P++ Y +++ G
Sbjct: 554 KYFHNMKRHGCVPDSFTYGSLISG 577
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A++ R + +G D+ NI+I C ++ + LV GL PT T ++++
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
C E ++ A+ + +M+ G P+S+T+G++I+G CK + A M++R P
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 204 NAV 206
V
Sbjct: 602 PEV 604
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 2/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L + + L+ AV M P N + A ++ G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 96 VAPDIYTLNI-VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
V PD + + VI C + + G++ + G P AT I+ LC V A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMI-QRGFIPDNATCTLILTALCENGLVNRA 271
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + R M + G++PN F ++I+G CK G + A + MV +PN + A++DG
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
AI ++ G P++ +I+ LC +L + + G +P T +++
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 144 GLCLENNVASAVT-FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
GLC A F + + + Y+PN +T+ ++I G+CK A + M E+
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 203 PNAVVYNAIMDG 214
PN Y +++G
Sbjct: 391 PNVNTYTTLING 402
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN L + + ++ L+++ S G PD+ T+ V+ LC+ R + L VL V
Sbjct: 251 FNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G + NT+V G C + A F ME GY PN T+ +I G+C +G +
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLD 370
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
SA+ +M N +N ++ G
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRG 397
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P +K FNS+ + + A ++ +SG+ D+YT I++ L R G +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L ++ +G+ P NT+++ LC V A + M+ +PN TF +I+ +C
Sbjct: 205 LQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCN 260
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+++ + P+ V +M+
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVVTVTKVME 291
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFG-----LSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
G P I IV +CL H R + G L ++ + G P ++T N ++ G C +
Sbjct: 487 EGGVPSI----IVSHCLIH-RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQ 541
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ V + + F M G P++ ++ ++ C GD + A L MVE+ P+ ++
Sbjct: 542 DKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMW 601
Query: 209 NAIM 212
+++M
Sbjct: 602 SSLM 605
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 14/186 (7%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCV----KDFNSLFTFVARTKHYAAAISLIKR 90
H++ I K+ A+ F A+ FP + +LF + + + L+
Sbjct: 45 HIVRLILDQKSASGALETFRW---ASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDE 101
Query: 91 AHSS-GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLEN 149
S G+ PD +I R +SV+ LV K G++P+ N+I++ L E+
Sbjct: 102 MPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 161
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFC---KIGDTESAVLCMRNMVERHCEPNAV 206
+ FTR M +G + YT+G ++ G +IGD + M+ PNAV
Sbjct: 162 IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKT---SGVAPNAV 218
Query: 207 VYNAIM 212
VYN ++
Sbjct: 219 VYNTLL 224
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + + A SL+ P+ T NI+I+ C+ ++ + +L F
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G P T+ ++ LC E V+ A+ +E+ G + + ++ G+C +G
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A M + PN YN ++ G
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAG 362
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 80/169 (47%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A F + + ++ +N + R + A +++K+ G+ P IY+ NI
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC L + +++GL+ + G+ P T +++G C V +A + + M
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+YT +++ K+G A +R M E+ + V N I+DG
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ S+ +DAA + +M+ N P N L + + + A L+++ + G
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 96 VAPDIYTLNIVINCLC---------------HLRRTA----FGLSVLGLV----FKTGLR 132
D T NI+++ LC + +A G S +GLV +
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P T +T++NGLC A A M QP+S + I+ FCK G SA
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+++M ++ C + YN+++ G
Sbjct: 582 LKDMEKKGCHKSLETYNSLILG 603
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 70 SLFTFVARTKHYAAAISLIK--RAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
S+ + A++ H A + R+ P +Y N+++ RR F + +
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T T N ++ LC + V +A M G +PN +TFG ++ G+CK G T+
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIM 212
+ + M PN V+YN I+
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIV 224
Score = 57.8 bits (138), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 4/183 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL S + ++ + M+ P FN L + + AA L G
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+ +T I++ C T GL +L + G+ P NTIV+ C E +
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM-VERHC---EPNAVVYNAI 211
M G P+ TF + I+ CK G A +M ++ + PN++ YN +
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297
Query: 212 MDG 214
+ G
Sbjct: 298 LKG 300
Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 40 IRSL---KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAA------ISLIKR 90
IR+L +DAA F +M P + FTF + Y A + L+
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKP------NEFTFGILVRGYCKAGLTDKGLELLNA 207
Query: 91 AHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENN 150
S GV P+ N +++ C R ++ + + GL P T N+ ++ LC E
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 151 VASAVTFTRHMENAGY----QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
V A ME Y +PNS T+ ++ GFCK+G E A ++ E +
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 207 VYNAIMDG 214
YN + G
Sbjct: 328 SYNIWLQG 335
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 58/148 (39%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +N L + + L K G+AP YT N++I LC +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G +P T +V G C + ME+ G PN + I++ FC+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNA 210
G + + + M E P+ V +N+
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 67/159 (42%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
++ N P + +++L + + +A A +L + PD NI I+ C +
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ VL + K G + T N+++ GL ++N + M+ G PN T+
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I C+ E A + M++++ PN + +++
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 80/198 (40%), Gaps = 24/198 (12%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
+R K ++A QM P + +N L + + + A +++ +GV PD
Sbjct: 337 VRHGKFIEAETVL-KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 395
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
T +++ C + + S+L + + P T N +++ L ++ A R
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM----------------------- 196
M GY ++ T I++G C G+ + A+ ++ M
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSL 515
Query: 197 VERHCEPNAVVYNAIMDG 214
+E +C P+ + Y+ +++G
Sbjct: 516 IENNCLPDLITYSTLLNG 533
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS- 121
P ++ FN L + K A ++K+ GV PD T N + C T S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 122 -VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
V +V K +P T +V G C E V + F R M+ + N F ++INGF
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ D + + M E + + + + Y+ +M+
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMN 338
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
++N+ ++ AV +M P +N+L + + + + + L+
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV- 151
+ V P+I T N+++ C ++ V+ + + G+RP T T NTI +
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 152 -ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
A + + + +PN T G ++ G+C+ G + +R M E E N VV+N+
Sbjct: 241 RAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNS 300
Query: 211 IMDG 214
+++G
Sbjct: 301 LING 304
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 3/166 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F + P + + +L + K Y + S++ SG D N VIN
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG--- 165
+ L + + GL PTT+T NT++ G + + M G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
PN TF ++ +CK E A ++ M E P+ V YN I
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N L R +V + +TG RP+ + T++ + ++ S + +E +G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +S F A+IN F + G+ E AV + M E P YN ++ G
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKG 159
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 1/171 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K +DAA F +M + L + K A+SL+ + P++ T
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
++I+ LC + + +++ + ++G++P ++ C + + A HM
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN T+ A+I GFCK + A+ + M+E++ P+ + YN ++ G
Sbjct: 324 NGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L+ + K +D A++ +M N P V+ + L + + + A++L K+ S
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ PD ++I C +L + + GL P T N ++ G C + NV A
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKA 348
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
+ M P+ T+ +I G C G+ +SA + M E PN
Sbjct: 349 MGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 60/149 (40%)
Query: 66 KDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGL 125
K +N+L + +AR L V+PDIYT N ++N C L +
Sbjct: 121 KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ + G P T + + G C V +A + M G N ++ +I G +
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ A+ + M + +C PN Y ++D
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDA 269
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L + A + ++ A P + S T R K AA + K +G
Sbjct: 161 LVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG 220
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ + +I L ++ LS+L + P T +++ LC + A+
Sbjct: 221 CHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAM 280
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDT-ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M +G +P+ + +I FC GDT + A + +M+E PN + YNA++ G
Sbjct: 281 NLFKQMSESGIKPDDCMYTVLIQSFCS-GDTLDEASGLLEHMLENGLMPNVITYNALIKG 339
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+M++ FP V F SL R + L + ++ G+ P+ +T +I+IN LC+
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
R +LG + + P N +++G C V A ME +P+ TF
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+I G C G AV MV C P+ + ++++
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A + ML +P FN L A+ A + + S G PD+ T
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C + + + G + + G+ P T + ++N LC EN + A + +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P + + +I+GFCK G A + + M ++ C+P+ + + ++ G
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKRAHSSGV 96
IR L + A + + F C D +N+L ++ A + K S V
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 97 -APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PD+ T +I+ C + S+L + + G+ PT T N +V+G + +A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M + G P+ TF ++I+G+C++G M R PNA Y+ +++
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN++ L ++ A+ F + L K FN L + A+ L+ G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTG--LRPTTATLNTIVNGLCLENNVAS 153
PDI T N +I C + V K+G P T ++++G C +
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A + M G P + TF +++G+ K G+ +A M+ C P+ V + +++D
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 214 G 214
G
Sbjct: 356 G 356
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+M++ FP V F SL R + L + ++ G+ P+ +T +I+IN LC+
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
R +LG + + P N +++G C V A ME +P+ TF
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+I G C G AV MV C P+ + ++++
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A + ML +P FN L A+ A + + S G PD+ T
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C + + + G + + G+ P T + ++N LC EN + A + +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P + + +I+GFCK G A + + M ++ C+P+ + + ++ G
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKRAHSSGV 96
IR L + A + + F C D +N+L ++ A + K S V
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 97 -APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PD+ T +I+ C + S+L + + G+ PT T N +V+G + +A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M + G P+ TF ++I+G+C++G M R PNA Y+ +++
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN++ L ++ A+ F + L K FN L + A+ L+ G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTG--LRPTTATLNTIVNGLCLENNVAS 153
PDI T N +I C + V K+G P T ++++G C +
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A + M G P + TF +++G+ K G+ +A M+ C P+ V + +++D
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 214 G 214
G
Sbjct: 356 G 356
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 78/203 (38%), Gaps = 36/203 (17%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D AV F M F + FN++ + ++K A L RA + D T N++
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVI 201
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN--- 163
+N C ++RT L VL + + G+ P T NT++ G + A F M+
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 164 --------------------------------AGYQPNSYTFGAIINGFCKIGDTESAVL 191
G P+ T+ A+I CK + E+AV+
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 192 CMRNMVERHCEPNAVVYNAIMDG 214
MV R EPN YN ++ G
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRG 344
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 70/177 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+LN +K A+ +M+ P + +N++ R A
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ T V++ +V + + G+ P+ AT N ++ LC ++NV +AV
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 320
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M GY+PN T+ +I G G+ M+ M CEPN YN ++
Sbjct: 321 VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 1/164 (0%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+ H+M + P K F + A A+ L H G D+ + N +++ L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C +R + + T T N I+NG CL A+ + M G PN
Sbjct: 172 CKSKRVEKAYELFR-ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ ++ GF + G A M +R CE + V Y ++ G
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHG 274
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
Query: 88 IKRAHS-------SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNT 140
IKRA + GV P + T N +I LC + + + + G P T N
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 141 IVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH 200
++ GL + + MEN G +PN T+ +I + + + E A+ M
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 201 CEPNAVVYNAIMDG 214
C PN YN ++ G
Sbjct: 401 CLPNLDTYNILISG 414
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 1/171 (0%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
++ D A M + N ++ F L R + A+ R G PD
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
+IVI+ L RR + S K P +V G C ++ A + M
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFD-SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ AG +PN YT+ +I+ C+ G A +M++ C PNA+ +N +M
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + +L R + A + K +G+ P++YT +IVI+ LC + + V
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ +G P T N ++ + M+ G +P++ T+ +I C+
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ E+AV + M+++ CE NA +N I
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTI 401
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 67/167 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A F +M A P V ++ + + R + A + SG AP+ T N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ RT L V + K G P T T N ++ C + N+ +AV M
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ N+ TF I K D A M+E CEPN V YN +M
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 60/160 (37%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F ML + P FN+L + + + + G PD T N +I C
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ VL + K +T NTI + + +V A M A +PN+ T
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ ++ F T+ + + M ++ EPN Y ++
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLV 472
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 70.5 bits (171), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A+ F +M P V +N + AI L++ HS G PD +
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 106 VINCLCHLRRTAFGLSVLGLVFKT-GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
++ LC +R ++ + K GL P T NT+++ L ++ A+ F + +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER-HCEPNAVVYNAIMDG 214
G++ + + AI++ CK G A + M+ + HC P+ V Y A+++G
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNG 463
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + + H A+ +K A G D + +++ LC R + ++ +
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 128 KTG-LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
G P T +VNG C V A + M G++PN+ ++ A++NG C+ G +
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 187 ESAVLCMRNMVERH-CEPNAVVYNAIMDG 214
A M NM E H PN++ Y+ IM G
Sbjct: 506 LEARE-MMNMSEEHWWSPNSITYSVIMHG 533
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 119 GLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIIN 178
L VL L+ + G+ P NT ++ N + A+ F M+ G PN T+ +I
Sbjct: 261 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 320
Query: 179 GFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+C + E A+ + +M + C P+ V Y IM
Sbjct: 321 GYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM 354
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 4/179 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ +R L A +M+ FP + N L + R A ++ + G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
A ++ VI+ C LSVL ++ T T+V+ L + +A A
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH-CEPNAVVYNAIMD 213
+ M + G P T+ +I+ +C++G + V + M+ R C +YN +++
Sbjct: 650 ELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR---TIYNQVIE 705
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSG-VAPDIYTLNIVINCLCHLRRTAFGLSVLGLV 126
++++ + + + A LI S G PD+ T V+N C L +L ++
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 127 FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
G +P T + ++NG+C A E + PNS T+ I++G + G
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIM 212
A +R MV + P V N ++
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLL 566
Score = 50.8 bits (120), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+ + +R A+ ++ +GV P++ N I+ R L L +
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T N ++ G C + V A+ M + G P+ ++ I+ CK
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 188 SAVLCMRNMVERH-CEPNAVVYNAIM 212
M+ M + H P+ V YN ++
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLI 390
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 62/152 (40%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + ++ R A L++ H+ G P+ + ++N +C ++ +
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + + P + T + I++GL E ++ A R M G+ P ++ C+
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G T A M + + C N V + ++ G
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F++M+ PCV D + L + KH A +A G+ P T +I++
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+R + V + + N +++ LC +V + M N G +P++Y+
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
F I+ +C GD SA + M PN +N I+
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
LL+S+ K ++ A FF + P K ++ L AR + + A +
Sbjct: 178 QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLER 237
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
D+ N +++ LC G + + GL+P + ++ C +V SA
Sbjct: 238 NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M+ PN YTF II CK + A L + M+++ P+ YN+IM
Sbjct: 298 YKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 6/180 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKRAH 92
L+ ++ A F +ML N CV D +N+L + ++ + +
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERN---CVVDLLAYNALLDALCKSGDVDGGYKMFQEMG 270
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ G+ PD Y+ I I+ C VL + + L P T N I+ LC V
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVD 330
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A M G P+++T+ +I+ C + A + M C P+ YN ++
Sbjct: 331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 54/132 (40%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
+A ++ R + P++YT N +I LC + +L + + G P T T N+I+
Sbjct: 296 SAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
C V A M+ P+ +T+ ++ +IG + A M ER
Sbjct: 356 AYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 203 PNAVVYNAIMDG 214
P Y ++ G
Sbjct: 416 PTVATYTVMIHG 427
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G++P L+ +++ LC + +V A F + G P++ T+ ++ G+ +I D A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M+ER+C + + YNA++D
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDA 252
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 48 AAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
A+ H ML P V + SL + + + A L A+ + D + +
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ L R+ +L + + G +P T T N ++NG C+EN+ SA M G
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ ++ I+ F +I E A +M R C P+ + Y + DG
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDG 372
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 7/170 (4%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS----GVAPDIYT 102
D A+ F +M+ P F +L + + A+ K H GV P ++
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL---KMKHDMLKVYGVRPTVHI 225
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+I LC + +F + ++ ++ A +T+++ L M
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G +P++ T+ +INGFC D+ESA + MVE+ +P+ + YN I+
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMIL 335
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L +++ + A+ L V P T +I+ LC R L + +
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 128 KT-GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
K G+RPT +++ LC ++ A + ++ + +I+ K G +
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + M E+ C+P+ V YN +++G
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLING 302
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 71 LFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTG 130
L T V + A + ++ ++ + D+ I+IN LC L++ G
Sbjct: 626 LKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRG 685
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
+ T T N+++NGLC + + A+ +EN G P+ T+G +I+ CK G A
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745
Query: 191 LCMRNMVERHCEPNAVVYNAIMDG 214
+ +MV + PN ++YN+I+DG
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDG 769
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 67/150 (44%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V D+ + + + A++L A S GV + T N +IN LC L +
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ GL P+ T +++ LC E A M + G PN + +I++G+CK+G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TE A+ + + P+A ++++ G
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ D+ + +I+I+ L L +LG + K G+ P T I+ GLC + A
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + G + + + + +I+G C+ G+ A + +M +R +P+ + YN +++G
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V ++ L +++ + A+ L+ + GV P++ T +I LC + + +
Sbjct: 277 VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFN 336
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G+ T+++G+C + N+ A + ME G QP+ T+ +ING C G
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A + V + + + Y+ ++D
Sbjct: 397 RVSEA-----DEVSKGVVGDVITYSTLLD 420
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + ++ A+ +M+ P + + ++ + + A L R S G
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D + +I+ +C S+LG + + G++P+ T NT++NGLC+ V+ A
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD 402
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ G + T+ +++ + K+ + ++ + R +E + V+ N ++
Sbjct: 403 EVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILL 454
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 3/156 (1%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA-P-DIYTLNIVINCLCHLRRTAFG 119
FP F SL AI +++ + V P D + + VI+ C + +
Sbjct: 131 FPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELA 190
Query: 120 LSVLGLVFKTG-LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIIN 178
L +G L P T T+V+ LC V R +E+ G++ + + I+
Sbjct: 191 LGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH 250
Query: 179 GFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ K G A++ R MVE+ + V Y+ ++DG
Sbjct: 251 GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDG 286
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 68/162 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + L A+ F + P + L + + + A L+ S G
Sbjct: 696 LINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG 755
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+I N +++ C L +T + V+ + P T+++++ G C + ++ A+
Sbjct: 756 LVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEAL 815
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMV 197
+ ++ + + F +I GFC G E A +R M+
Sbjct: 816 SVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +NSL +R+ + + +++ + G+ PDI + N VI C R +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ +G+ P T NT + ++ A+ R+M G +PN T+ +I++G+CK
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Query: 183 IGDTESAVLCMRNMVERHCEPNA 205
+ + A L + ++ R+ +P+A
Sbjct: 782 LNRKDEAKLFVEDL--RNLDPHA 802
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS- 121
P + NS+ + R + A A ++ G P + T N ++ H R FG S
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM--YMHSRSADFGKSE 684
Query: 122 -VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+L + G++P + NT++ C + A M N+G P+ T+ I +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E A+ +R M++ C PN YN+I+DG
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P +N+L T R + A + + ++G + D T N +++ R + V
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + G P+ T N++++ + + A+ M G +P+ +T+ +++GF +
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G ESA+ M C+PN +NA +
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A+ +QM P V + +L + R +A+S+ + ++G P+I T N
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT-FTRHMENA 164
I + + + + + GL P T NT++ + +N + S V+ + M+ A
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL-AVFGQNGMDSEVSGVFKEMKRA 483
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+ P TF +I+ + + G E A+ R M++ P+ YN ++
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 75/177 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ +++A++ F +M A P + FN+ + + + + G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PDI T N ++ + V + + G P T NT+++ + A+
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
T R M +AG P+ T+ ++ + G E + + M + C+PN + Y +++
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 74/164 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F +ML N P + +L R+ + A + + GV D+ N +I
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C L+ + + + L P T +TI++G + ++A+A+ R+ME +P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N T+ ++INGFC GD + A + M R PN V Y ++
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 72/172 (41%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
L ++ A F ++ P ++ F ++ + + A+ L+ G+ ++
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
LN +I+ +G + +P AT N ++N LC E AV F
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN+ ++ +I +CK + + A + M ER C+P+ V Y ++ G
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAA-NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHS 93
H+L++ +L AV + ++ + P V NSL + + +++ A +
Sbjct: 139 HVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCD 198
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
G + D Y+ I++ +C+ + G ++ + G P NTI+ G C ++ +
Sbjct: 199 RGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN 258
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A + ++ G+ P TFG +INGFCK GD ++ + + ER + N I+D
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 214 G 214
Sbjct: 319 A 319
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 72/159 (45%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
++A + P V +N L + + A+ + A G+ P+ + +I C +
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+L + + G +P T +++GL + ++ AV + + G P++ +
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++G CK G A L M++R+ P+A VY ++DG
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Score = 60.8 bits (146), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 69/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV +++ P +N L + + +T + A L + PD Y
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ V L + G++ N ++ G C + A+ M
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +T+ II+G+ K D +A+ R M + C+PN V Y ++++G
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING 599
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 77/214 (35%), Gaps = 35/214 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + AV F + P + L ++K Y A L+ + G
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T I+I+ L +++ + G+ P A N +++GLC A
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 156 TFTRHMENAGYQPNSYTFG-----------------------------------AIINGF 180
M + P++Y + A+I GF
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGF 530
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ G + A+ CM M E H P+ Y+ I+DG
Sbjct: 531 CRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Score = 57.8 bits (138), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
N++ R+ A++ + R + + PD +T + +I+ + A + + + K
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT-E 187
+P T +++NG C + + A + M+ PN T+ +I K T E
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
AV M+ C PN V +N ++ G
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQG 670
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
++N+ ++ AV +M P +N+L + + + + + L+
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV- 151
+ V P+I T N+++ C ++ V+ + + G+RP T T NTI +
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 152 -ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
A + + + +PN T G ++ G+C+ G + +R M E E N VV+N+
Sbjct: 241 RAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNS 300
Query: 211 IMDG 214
+++G
Sbjct: 301 LING 304
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS- 121
P ++ FN L + K A ++K+ GV PD T N + C T S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 122 -VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
V +V K +P T +V G C E V + F R M+ + N F ++INGF
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 181 CKIGDTE 187
++ D +
Sbjct: 306 VEVMDRD 312
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 3/166 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F + P + + +L + K Y + S++ SG D N VIN
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG--- 165
+ L + + GL PTT+T NT++ G + + M G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
PN TF ++ +CK E A ++ M E P+ V YN I
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N L R +V + +TG RP+ + T++ + ++ S + +E +G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +S F A+IN F + G+ E AV + M E P YN ++ G
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKG 159
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S L+ A+ F+QM A P + +L A+ A+ + +R + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD +T +++INCL + + G P T N +++ N +A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R M+NAG++P+ T+ ++ G E A M +++ P+ VY ++D
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVA---RTKHYAAAISLIKRAHSSGV 96
++ + A+ FF+ + F D ++ T V R K + A L+ G
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFK--HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
P+ T N +I+ ++V + + G +P T T+++ + A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ M+ G P+++T+ IIN K G +A MV++ C PN V YN +MD
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + L AA F +M+ P + +N + A+ ++Y A+ L + ++G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD T +IV+ L H +V + + P +V+ NV A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + M +AG +PN T ++++ F ++ A ++NM+ P+ Y ++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 36/191 (18%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+AA F +ML P V +NSL F+ R A SL++ + P+ T ++
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 107 INCLC------HLRRTAFGLS-----------------------------VLGLVFKTGL 131
+ LC ++ F + +LG + K +
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Query: 132 RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVL 191
+P N +VN LC E V A M+ G +PN+ T+ +I+GFC+I D +S +
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLN 382
Query: 192 CMRNMV-ERHC 201
+ M+ RHC
Sbjct: 383 VLNAMLASRHC 393
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + L+ A +FF P FN L + AA +
Sbjct: 157 LINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME 216
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P + T N +I LC S+L + K +RP T ++ GLC + A
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
ME G +P +G +++ K G + A L + M +R +P+ V+YN +++
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 6/180 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQ---MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAH 92
L ++ ++ + A++ FHQ M + +P ++SL +A+++++ A +++
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYP---SYSSLIYKLAKSRNFDAVDQILRLVR 108
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
V +I + V + T +LNT++N L +
Sbjct: 109 YRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELE 168
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A +F ++ +PNS +F +I GF D E+A M+E +P+ V YN+++
Sbjct: 169 KAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLI 228
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 72/163 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D + F + A P V ++ L + + A L S G+ P + T N
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C GLS + +++ P T ++++GLC + A+ M+
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
PN TF A+I G CK G + A++ R M E+ EP++ VY
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 67.4 bits (163), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 62/131 (47%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
+ L + ++G PD+ +++I LC RT + + GL+PT AT N++++
Sbjct: 598 GLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMID 657
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G C E + ++ M P+ T+ ++I+G C G A+ M + C P
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 204 NAVVYNAIMDG 214
N + + A++ G
Sbjct: 718 NRITFMALIQG 728
Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 90 RAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLEN 149
+ H+ + PD +L+IVINCL + +++L + + GL P N I+ G+C E
Sbjct: 429 KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG 488
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
++ M++AG +P+ +T I + D A+ ++ M EP
Sbjct: 489 RSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP 542
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 62/168 (36%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ ++ +M A P N ++ +A + A+ L+K+ G P I +
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+ LC R L V G ++GL V + R + G+
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ + +I CK T A + MV + +P YN+++DG
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FNS+ + R Y A +++ G++PD+ T N +++ +L +
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG--- 184
K+ L+P + NT++ G C + AV M G +P +T+ ++G+ +G
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ E + CM + C PN + + ++DG
Sbjct: 754 EIEDVIECM---AKNDCRPNELTFKMVVDG 780
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFG-LSVL 123
V+ + ++ +RT Y AI L +R G +P + T N++++ + R+ L VL
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 124 GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
+ GL+ T +T+++ E + A F +++ GY+P + T+ A++ F K
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G A+ ++ M E C ++V YN ++
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELV 358
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 53/128 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +NSL R A ++K S + PD+ + N VI C + +
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + G+RP T NT V+G A M +PN TF +++G+C+
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Query: 183 IGDTESAV 190
G A+
Sbjct: 784 AGKYSEAM 791
Score = 53.9 bits (128), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 68/167 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A FF ++ + P +N+L + Y A+S++K + D T N
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ + V+ ++ K G+ P T T+++ A+ M+ AG
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
PN+ T+ A+++ K + + + +M C PN +N ++
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A +L K+ G PD+ N +++ +L + + GL P T N++++
Sbjct: 618 AFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
A + +E + +P+ ++ +I GFC+ G + AV + M ER P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 204 NAVVYNAIMDG 214
YN + G
Sbjct: 735 CIFTYNTFVSG 745
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+LNS+ +K + QML P V +N L R L G
Sbjct: 225 ILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDG 284
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PD YT NI+++ L + L+ L + + G+ P+ T+++GL N+ +
Sbjct: 285 FSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACK 344
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F M AG +P+ + +I G+ G+ + A R M + PN YN+++ G
Sbjct: 345 YFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 403
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F + N P +N++ + K Y + K+ G +PD+ T NI++
Sbjct: 203 AVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLW 262
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L + + + + G P + T N +++ L N +A+T HM+ G P
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +I+G + G+ E+ + MV+ C P+ V Y ++ G
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG 368
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.8 bits (164), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S L+ A+ F+QM A P + +L A+ A+ + +R + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD +T +++INCL + + G P T N +++ N +A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R M+NAG++P+ T+ ++ G E A M +++ P+ VY ++D
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Score = 57.8 bits (138), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 64/146 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ ++ + R K + A L+ G P+ T N +I+ ++V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G +P T T+++ + A+ + M+ G P+++T+ IIN K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
+A MV++ C PN V YN +MD
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMD 512
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 76/177 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + L AA F +M+ P + +N + A+ ++Y A+ L + ++G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD T +IV+ L H +V + + P +V+ NV A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + M +AG +PN T ++++ F ++ A ++NM+ P+ Y ++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.8 bits (164), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S L+ A+ F+QM A P + +L A+ A+ + +R + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD +T +++INCL + + G P T N +++ N +A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R M+NAG++P+ T+ ++ G E A M +++ P+ VY ++D
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Score = 57.8 bits (138), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 64/146 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ ++ + R K + A L+ G P+ T N +I+ ++V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G +P T T+++ + A+ + M+ G P+++T+ IIN K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
+A MV++ C PN V YN +MD
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMD 512
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 76/177 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + L AA F +M+ P + +N + A+ ++Y A+ L + ++G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD T +IV+ L H +V + + P +V+ NV A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + M +AG +PN T ++++ F ++ A ++NM+ P+ Y ++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S L A+ F+QM A P + +L A+ A+ + +R +G
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG 459
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD +T +++INCL + + G P T N ++ N +A+
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R M+NAG+QP+ T+ ++ G E A M ++ P+ VY ++D
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 67.4 bits (163), Expect = 8e-12, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ ML A P +N+L + ++ A+ + K+ +GV PD+ T NIV++
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM--ENAGY 166
R+ + LS L+ +RP T T N I+ L + A+ M + A
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 316
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ TF +I++ + G+ E+ MV +PN V YNA+M
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A F +M + P + +++L R + A++L+ + +AP T N
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN L V + G+ P T N +++ + A+++ M+ A
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER--HCEPNAVVYNAIM 212
+P++ TF II K+G + A+ +M E+ C P+ V + +IM
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 327
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L+N+ S A+ +M P + N + + + Y+ A+S + +
Sbjct: 218 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 277
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF--KTGLRPTTATLNTIVNGLCLENNVA 152
V PD T NI+I CL L +++ L + + + RP T +I++ ++ +
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G +PN ++ A++ + G + +A+ + ++ + P+ V Y ++
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 397
Query: 213 D 213
+
Sbjct: 398 N 398
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 71/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ S L AV F QM P V +L +R+K +++ A S G
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 490
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ + N I + +++ + K ++ + T +++G C + A+
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ + ME+ + +++ + K G A M CEP+ + Y +++
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 67.0 bits (162), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 85 ISLI-KRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
+SLI + + GV+PD++ LN++I+ C + R +F +S+L + T T NT+++
Sbjct: 113 VSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVIS 169
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
GLC A F M G P++ ++ +I+GFCK+G+ A + +V+ E
Sbjct: 170 GLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA----KALVDEISEL 225
Query: 204 NAVVYNAIM 212
N + + ++
Sbjct: 226 NLITHTILL 234
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 70/163 (42%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
+M + +P + +L + + Y A++L + G+ D+ ++++ L
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
++ + P T +V+GLC +++SA M PN
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ ++ING+ K G E AV +R M +++ PN Y ++DG
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL---CHLRRTAFGLSVLG 124
+N+L + + A ++ + G PD T N +++ H+R+ LS
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK---ALSTYS 737
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
++ + G+ P AT NTI+ GL + + M++ G +P+ +T+ A+I+G KIG
Sbjct: 738 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + ++ M+ P YN ++
Sbjct: 798 NMKGSMTIYCEMIADGLVPKTSTYNVLI 825
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 70/169 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ +QM+ P + + ++ K A + S G+ N
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC L T V+G + G P T T N++++G + ++V A++ M AG
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ II G G + + M R P+ YNA++ G
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 20/189 (10%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ L A M A P FNSL H A+S +G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT----------GLRPTTATLNTIVNGL 145
++P++ T N +I GLS GL+ + G+RP T N +++G
Sbjct: 744 ISPNVATYNTIIR----------GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 793
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
N+ ++T M G P + T+ +I+ F +G A ++ M +R PN
Sbjct: 794 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 853
Query: 206 VVYNAIMDG 214
Y ++ G
Sbjct: 854 STYCTMISG 862
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 57/116 (49%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
P++ T +++ LC + ++ + + + P T ++++NG + + AV+
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R ME+ PN +T+G +I+G K G E A+ + M E N + +A+++
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 3/179 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+S +L ++ A + M+ + P V F+S+ + + L++
Sbjct: 233 LLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS 289
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+ T +++ L L++ + G+ +++GL ++ A
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 349
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + PN T+ A+++G CK GD SA + M+E+ PN V Y+++++G
Sbjct: 350 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMING 408
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 61/152 (40%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + FN + + + L + S G+ P + + NIV+ LC + + +
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + P T ++ + + + G + + + +I CK
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+G T+ A + M +M R P+ V +N++M G
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 77/178 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L A F +L N P V + +L + + ++A +I +
Sbjct: 335 LMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKS 394
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++ T + +IN +S+L + + P T T+++GL A+
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ M G + N+Y A++N +IG + +++MV + + + Y +++D
Sbjct: 455 ELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 59/135 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ + M+ A P V +N++ ++ + S G+ PD +T N +I+
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+ +++ + GL P T+T N +++ + A + M G P
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 169 NSYTFGAIINGFCKI 183
N+ T+ +I+G CK+
Sbjct: 852 NTSTYCTMISGLCKL 866
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 67.0 bits (162), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 70/146 (47%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++F+ + + K + L ++ G +PDI+T NI+I + +++ +
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
++ +P + N+++N L +V A + M+ G P+ T+ ++ F K E
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A M+ + C+PN V YN ++D
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLD 590
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 16/184 (8%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+ +++ LK + F +M P P + +N L R AI++ + S
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 96 VAPDIYTLNIVINCL--------CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCL 147
PDI + N +INCL H+R + GL P T +T++
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ--------EKGLNPDVVTYSTLMECFGK 559
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVV 207
V A + M G QPN T+ +++ K G T AV M ++ P+++
Sbjct: 560 TERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Query: 208 YNAI 211
Y +
Sbjct: 620 YTVL 623
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
AI ++ + H GV D N V + L L++ + + + K G P T N ++
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
V A+ +E + +P+ ++ ++IN K GD + A + + M E+ P
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545
Query: 204 NAVVYNAIMD 213
+ V Y+ +M+
Sbjct: 546 DVVTYSTLME 555
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ ML A P +N+L + ++ A+ + K+ +GV PD+ T NIV++
Sbjct: 65 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 124
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM--ENAGY 166
R+ + LS L+ +RP T T N I+ L + A+ M + A
Sbjct: 125 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 184
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ TF +I++ + G+ E+ MV +PN V YNA+M
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A F +M + P + +++L R + A++L+ + +AP T N
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN L V + G+ P T N +++ + A+++ M+ A
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER--HCEPNAVVYNAIM 212
+P++ TF II K+G + A+ +M E+ C P+ V + +IM
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 195
Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L+N+ S A+ +M P + N + + + Y+ A+S + +
Sbjct: 86 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 145
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF--KTGLRPTTATLNTIVNGLCLENNVA 152
V PD T NI+I CL L +++ L + + + RP T +I++ ++ +
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G +PN ++ A++ + G + +A+ + ++ + P+ V Y ++
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 265
Query: 213 D 213
+
Sbjct: 266 N 266
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 71/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ S L AV F QM P V +L +R+K +++ A S G
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 358
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ + N I + +++ + K ++ + T +++G C + A+
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 418
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ + ME+ + +++ + K G A M CEP+ + Y +++
Sbjct: 419 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
H+++S+ + A + M + P +N++ + + A L++
Sbjct: 312 HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEF 371
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
P YT +++ LC T +VL L+ + T N + GLC+ +N
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEI 431
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE-RHCEPNAVVYNAIMD 213
+ M +P+ YT +ING CK+G + A+ + +M+ + C P+AV N +M
Sbjct: 432 LNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMC 491
Query: 214 G 214
G
Sbjct: 492 G 492
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLV-----FKTGLRPTTATLNTIVNGLCL 147
+SG PD T N++I L + R +S LG++ FK P+ N ++N LC
Sbjct: 118 ASGFIPDERTCNVIIARLLYSRSP---VSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCT 174
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVV 207
V A M N G+ P+ TF +I G+C+I + E A M PN++
Sbjct: 175 IYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLT 234
Query: 208 YNAIMDG 214
+ ++ G
Sbjct: 235 LSVLIGG 241
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 6/181 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFT----FVARTKHYAAAISLIKRA 91
++N + + +D A+ M+ C D +L T +A+ + A L +
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKF--CAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 92 HSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
+ + P + N VI L L + +SV G + K + + T I++GLC+ N V
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
A F + + +++ + A + G C+ G A + ++ + PN V YN +
Sbjct: 571 DMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTV 630
Query: 212 M 212
+
Sbjct: 631 I 631
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGL-RPTTATLNTIVNGLCLENNVASAV- 155
PD YTLN VIN LC + R + VL + P TLNT++ GL + A+
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M +P + A+I G K+ + A+ + + ++ Y I+DG
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 2/154 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKR--AHSSGVAPDIYTLN 104
D A F LA+ P + N + + ++ + + +I R P + N
Sbjct: 107 DEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYN 166
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
++N LC + R ++ + G P T T++ G C + A M
Sbjct: 167 RLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVC 226
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
G +PNS T +I GF K+ D E+ M+ + E
Sbjct: 227 GIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 70/169 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A + +MLAA + +S + Y A S+I+ G PD T +
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
V+N LC+ + + + + GL T +V+ C + A + M G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ A+I+ + K A M+ C PN V Y+A++DG
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 53/119 (44%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G +YT + +I+ ++R VL + + P +++GLC A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ME G QPN T+ A+I+GF IG E+ + + M + PN V Y ++D
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 74/210 (35%), Gaps = 41/210 (19%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K L + M+ +P K FNSL + ++ A L+K+ G P
Sbjct: 351 KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVY 410
Query: 104 NIVI-----------------------------------------NCLCHLRRTAFGLSV 122
NI+I CLC + SV
Sbjct: 411 NILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV 470
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G P T+T + ++N LC + + A M+ G + YT+ +++ FCK
Sbjct: 471 IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK 530
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G E A M E C PN V Y A++
Sbjct: 531 AGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 16/195 (8%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ K + A F ML+ P + +++L + A + +R S
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 96 VAPDI----------------YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLN 139
PD+ T +++ C R +L + G P +
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 140 TIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
+++GLC + A M G+ YT+ ++I+ + K+ + A + M+E
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 200 HCEPNAVVYNAIMDG 214
C PN V+Y ++DG
Sbjct: 739 SCAPNVVIYTEMIDG 753
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 67/188 (35%), Gaps = 24/188 (12%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A + +M+ P ++ + ++ A L + G+ D+YT I+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
++ C + + G P T +++ V+ A M + G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC--------------------EPNAV 206
PN T+ A+I+G CK G E A + ER C PN V
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKAC----QIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 207 VYNAIMDG 214
Y A++DG
Sbjct: 641 TYGALLDG 648
Score = 50.4 bits (119), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPC-VKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L++ + + LD A +M + + FP + ++SL + K A ++ + +
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEM-SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
AP++ +I+ LC + +T ++ ++ + G +P T +++G + + +
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G PN T+ +I+ CK G + A + M + H + Y +++G
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 71/169 (42%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ ++ A F +M P + FN+ + + ++++ G PD+ T
Sbjct: 439 RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 498
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++INCLC + + + G+ P T N ++ C + +V M+
Sbjct: 499 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 558
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G P+ Y + A I FCK+ + A ++ M+ +P+ Y+ ++
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Score = 60.5 bits (145), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 66/171 (38%), Gaps = 20/171 (11%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
+ QM V +N++ + + + A + G++P++ T N ++
Sbjct: 412 YLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLS--- 468
Query: 112 HLRRTAFGLSVLGLVFKT----------GLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
G SV G V K G +P T + I+N LC + A + M
Sbjct: 469 -------GYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM 521
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G +PN T+ +I C GDT+ +V M E P+ YNA +
Sbjct: 522 LEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 58/137 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K + A F +ML P +N L T ++ L + +G
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD+Y N I C +R+ +L + + GL+P T +T++ L + A
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAR 620
Query: 156 TFTRHMENAGYQPNSYT 172
+E G P+SYT
Sbjct: 621 EMFSSIERHGCVPDSYT 637
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
++ L+K SG + ++I L + V + G++P+T N +++
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
L N++ A + M + G +P+ +T+ +I+G CK G + A+ ++ M + P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 204 NAVVYNAIMDG 214
N Y ++DG
Sbjct: 249 NVFTYTILIDG 259
Score = 53.5 bits (127), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGL--VFKTGLRPTTATLNTIVNGLCLENNVA 152
G+ P N VI+ L ++ + L+ L + G +P T N +++G+C + V
Sbjct: 175 GMKPSTRLYNAVIDAL--VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVD 232
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A+ + ME G +PN +T+ +I+GF G + A+ + M R PN +
Sbjct: 233 EAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 213 DG 214
G
Sbjct: 293 HG 294
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V F+ + + R K A K G+ P+ T NI+I C T + +
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + GL P N + C V A + M G +P+++T+ +I +
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 183 IGDTESAVLCMRNMVERH-CEPNA 205
G ES M + +ERH C P++
Sbjct: 613 SG-RESEAREMFSSIERHGCVPDS 635
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 48/187 (25%)
Query: 74 FVARTKHYAAAISLIKRAH-------------SSGVAPDIYTLNIVINCLCHLRRTAFGL 120
++ + + AA+S + + H S GV P +++ L + +R + G
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 121 SVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA----- 175
L + GL + + N +++ LC + +A F M++ G PN TF
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 176 ------------------------------IINGFCKIGDTESAVLCMRNMVERHCEPNA 205
IIN C+ + + A C + M+E EPN
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 206 VVYNAIM 212
+ YN ++
Sbjct: 531 ITYNILI 537
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 1/172 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHY-AAAISLIKRAHSSGVAPDIYT 102
K + ++ F++ML N P K N + + + Y A L K + GV P+ +
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N+++ C + + G + + + P + ++ G C + V A+ M
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N G+ P+ ++ ++N C+ A + M + C P+ V YN ++ G
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 66/169 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A F +ML + P V + L R A+ L+ + G PD +
Sbjct: 206 LSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTT 265
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N LC + +L + G P NT++ G C E+ A M + G
Sbjct: 266 LLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNG 325
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PNS ++ +I G C G + + M+ + P+ V N ++ G
Sbjct: 326 CSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 64/169 (37%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A F P + +N L + A L + V PD+ + I
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C + + +L + G P + T++N LC + + A M+ G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ + +I GFC+ A + +M+ C PN+V Y ++ G
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 54/145 (37%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
++ A+ ML P + +L + R A L+ R G PD+ N
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYN 299
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+I C R VL + G P + + T++ GLC + + M +
Sbjct: 300 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK 359
Query: 165 GYQPNSYTFGAIINGFCKIGDTESA 189
G+ P+ ++ GFC G E A
Sbjct: 360 GFSPHFSVSNCLVKGFCSFGKVEEA 384
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 5/161 (3%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+ML N C N L + A +++ + S GV PD+ T N + +
Sbjct: 454 EMLQPNDRTC----NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
Query: 115 RTAFGLS-VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
T ++ + ++P T TIVNG C E + A+ F M+ G PN + F
Sbjct: 510 STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVF 569
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++I GF I D + + M E +P+ V ++ +M+
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Score = 60.8 bits (146), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 88/251 (35%), Gaps = 72/251 (28%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + A + F+ ++ P + + +L T + R KH+ + +SLI + +G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL---------- 145
+ PD N +IN + + + ++G +PT +T NT++ G
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 146 --------------------------CLENNVASAVTFTRHMENAGYQPNSYTF------ 173
C + + A M++ G +P+ TF
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 174 ------------------------------GAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G I+NG+C+ G E A+ M E P
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 204 NAVVYNAIMDG 214
N V+N+++ G
Sbjct: 565 NLFVFNSLIKG 575
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
D+ + ++N L R S+ + + G +P+ T T+V L + + S ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+E G +P++ F AIIN + G+ + A+ M E C+P A +N ++ G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 72/172 (41%), Gaps = 1/172 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLI-KRAHSSGVAPDIYT 102
+ ++ A ++M + P V FN+L AR A +I R + V P++ T
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRT 533
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
++N C + L + + G+ P N+++ G N++ ME
Sbjct: 534 CGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +P+ TF ++N + +GD + +M+E +P+ ++ + G
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Score = 50.8 bits (120), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 56/131 (42%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ R GV P+++ N +I ++ V+ L+ + G++P T +T++N
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
++ M G P+ + F + G+ + G+ E A + M + P
Sbjct: 610 AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRP 669
Query: 204 NAVVYNAIMDG 214
N V+Y I+ G
Sbjct: 670 NVVIYTQIISG 680
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
Query: 57 LAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA-PDIYTLNIVINCLCHLRR 115
L P C+ FN L + A +++ SG++ P+ T + +++CL R
Sbjct: 190 LGLQPNTCI--FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSR 247
Query: 116 TAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
+ + + ++ K G+ P T N ++NG C V A M+ G PN Y +
Sbjct: 248 SKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYS 307
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A++NGFCK+G + A + + + + V Y +M+
Sbjct: 308 ALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
G++PD T N++IN C +L + K G P + ++NG C +
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A ++ G + ++ + ++N FC+ G+T+ A+ + M C + + YN I+
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380
Query: 213 DG 214
G
Sbjct: 381 RG 382
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 87 LIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLR-PTTATLNTIVNGL 145
L+ H+ G+ P+ NI++ C F V+ + ++G+ P + T +T+++ L
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 146 CLENNVASAVT-FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
+ AV F + G P+ TF +INGFC+ G+ E A + M + C PN
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 205 AVVYNAIMDG 214
Y+A+M+G
Sbjct: 303 VYNYSALMNG 312
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 60/150 (40%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V ++++L + A +G+ D ++NC C T + +
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
LG + + R T T N I+ GL E A+ + G N ++ I+N C
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+ E AV + M ER P+ +N ++
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELV 450
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 20/189 (10%)
Query: 46 LDAAVAFFHQMLAANPF--------------------PCVKDFNSLFTFVARTKHYAAAI 85
+DA +A +H M+ P V + L + + A+
Sbjct: 445 IDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL 145
+ + GV ++ T +++IN L+ A +V + K G++P N I++
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
C N+ A+ + M+ ++P + TF II+G+ K GD ++ M C P
Sbjct: 565 CGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTV 624
Query: 206 VVYNAIMDG 214
+N +++G
Sbjct: 625 HTFNGLING 633
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 78/180 (43%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+++++ + +D A+ +M P + F + A++ ++ +
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G P ++T N +IN L R+ + +L + G+ T I+ G + A
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++N G + +T+ A++ CK G +SA+ + M R+ N+ VYN ++DG
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 62/150 (41%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
+K ++ + + K +A A ++ + G+ PD+ N +I+ C + + +
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK 578
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ K RPTT T I++G ++ ++ M G P +TF +ING +
Sbjct: 579 EMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKR 638
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E AV + M N Y IM G
Sbjct: 639 QMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 61/129 (47%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A +L++ G+ I + +++ + GL V + + G PT T ++N
Sbjct: 433 AEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
++ A+ +R M+ G + N T+ +INGF K+ D +A +MV+ +P
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 204 NAVVYNAIM 212
+ ++YN I+
Sbjct: 553 DVILYNNII 561
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 68/179 (37%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + ++ AV +M A + + A A R + G
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ DI+T ++ C R L+V + + + N +++G +V A
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+ G +P+ +T+ + I+ K GD A + M +PN Y ++ G
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 77 RTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK-TGLRPTT 135
R AA L +++ S P ++T N +I + +R + +S+ FK + + P
Sbjct: 157 RASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNV 216
Query: 136 ATLNTIVNGLCLENNVASAVTFTRH-MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
+ N I+N C E NV A+ RH + NA + P+S T+ + G + G A +R
Sbjct: 217 VSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLR 276
Query: 195 NMVERHCEPNAVVYNAIMDG 214
M+ + ++ VYN ++ G
Sbjct: 277 EMLSKGQAADSTVYNNLIRG 296
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 35 HLLNSIRSL---KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKR- 90
+L N ++SL LDAA Q + +N P V N++ + R K Y+ +ISL +
Sbjct: 147 NLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYF 206
Query: 91 AHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTG-LRPTTATLNTIVNGLCLEN 149
S + P++ + N +IN C L V + P++ T + GL
Sbjct: 207 FKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAG 266
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
+ A + R M + G +S + +I G+ +GD + AV
Sbjct: 267 RIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAV 307
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN+L R A + G D++T N + +C L+R L +
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G++ +T + +++ C E NV A M + G QPN+ T+ +I +CK G +
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A NM +P++ Y +++ G
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHG 548
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 35/209 (16%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
+ + +D + F +M+ + V + + R + LIK G+ P+
Sbjct: 200 KKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEA 259
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGL--RPTTATL-------------------- 138
YT N +IN R + VL ++ K G+ T TL
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 139 -------------NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
++++ C + N+ A + G P+SYT+GA+I+G CK+G+
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A + M M + VV+N ++DG
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 69/170 (40%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
LK D A + +M+ + +L + + A L S GV P+ T
Sbjct: 447 LKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N++I C + + + G+ P + T ++++G C+ +NV A+ M
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 566
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G NS T+ +I+G K G ++ A M + + VY A++
Sbjct: 567 LKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 4/161 (2%)
Query: 54 HQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
+ A+ F C N++ + R K Y A + R GV + +I+ C
Sbjct: 427 QKGFQADVFTC----NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
+ + G++P T N ++ C + + A +ME G P+SYT+
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++I+G C + + A+ M + + N+V Y ++ G
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 78/209 (37%), Gaps = 36/209 (17%)
Query: 39 SIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAP 98
S+++ K DA F +M V + SL ++ R + A L G++P
Sbjct: 304 SVKNGKMSDAE-KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSP 362
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
YT +I+ +C + ++ + G+ T NT+++G C + V A
Sbjct: 363 SSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY 422
Query: 159 RHMENAGYQPNSYT-----------------------------------FGAIINGFCKI 183
ME G+Q + +T + +I+ +CK
Sbjct: 423 DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+ E A M + +PNA+ YN ++
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 64/120 (53%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV + T NI I LC +++ ++L + G++P T T + +++G C E++ A
Sbjct: 252 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 311
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M N G +P+S + +I CK GD E+A+ + +E++ P+ + ++++G
Sbjct: 312 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 371
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 36/199 (18%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISL-IKRAHSSGVAPDIYTLN 104
LD ++ F + VK N+L K Y A + I+ G+ PD+ T N
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 191
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNG-------------------- 144
+I C + S++ + + G++P +++ +++G
Sbjct: 192 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 251
Query: 145 ---------------LCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
LC A M +AG +PN+ T+ +I+GFC D E A
Sbjct: 252 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 311
Query: 190 VLCMRNMVERHCEPNAVVY 208
+ MV R C+P++ Y
Sbjct: 312 KKLFKIMVNRGCKPDSECY 330
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
LLN+ + K D F ++ P V +N+L + + A++LI +
Sbjct: 147 LLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENK 206
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ PD T NI+++ + G + + + ++ + N + GL +EN
Sbjct: 207 GLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEM 266
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
V+ ++ +P+ +TF A+I GF G + A+ + + + C P V+N+++
Sbjct: 267 VSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K + P A+ NT++ GLC + + AV +EN G +P+ TF +++ G E
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
MVE++ + + YNA + G
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLG 256
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 69/150 (46%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V +N+L +T LI S+G++PD+ T NI+I+ + ++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ + G P+T ++ G + A +M + +P+ T A+++G+CK
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E A++ +++ +P+ V+YN ++ G
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + ++S + + T A ++ + G+ PD +I+ C+L RT
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLE-NNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
G + K+G P + T +TI+ G C +++ A + R+M+ G + + T+ +++G+
Sbjct: 431 FGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
K + M P+ YN ++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILI 520
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 69/150 (46%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V +N+L +T LI S+G++PD+ T NI+I+ + ++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ + G P+T ++ G + A +M + +P+ T A+++G+CK
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E A++ +++ +P+ V+YN ++ G
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + ++S + + T A ++ + G+ PD +I+ C+L RT
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLE-NNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
G + K+G P + T +TI+ G C +++ A + R+M+ G + + T+ +++G+
Sbjct: 431 FGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
K + M P+ YN ++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILI 520
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 71/179 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S + +V F +M +K +NSLF + R Y A + S G
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P +T N+++ R L + G+ P AT NT++NG C + A
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAE 310
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ P+ ++ +I G+ + + + M EPNA Y+ ++ G
Sbjct: 311 KLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPG 369
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 63.9 bits (154), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 65 VKDFN-SLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL 123
V FN +++F +K + A +S+ R GV P++ + N++I+ C F L +L
Sbjct: 218 VNTFNLVIYSFCKESKLFEA-LSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL 276
Query: 124 G---LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
G ++ + P T N+++NG C + A M +G N T+GA+++ +
Sbjct: 277 GKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAY 336
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G ++ A+ M + N V+YN+I+
Sbjct: 337 GRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 89 KRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
K S G ++ T N+VI C + LSV + K G+ P + N +++G C
Sbjct: 207 KEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKT 266
Query: 149 NNVASAVTFTRHM---ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
++ A+ M PN+ T+ ++INGFCK G + A +MV+ + N
Sbjct: 267 GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNE 326
Query: 206 VVYNAIMDG 214
Y A++D
Sbjct: 327 RTYGALVDA 335
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+SL + A +I++ + G ++ LN + CL ++ V +
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T N ++ C E+ + A++ M G PN +F +I+G CK GD
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 188 SAVLC---MRNMVERHCEPNAVVYNAIMDG 214
A+ M M PNAV YN++++G
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVING 300
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 38/202 (18%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLI-KRAHSSG--VAPDIYTLNI 105
A++ F++ML +P V FN + +T A+ L+ K SG V+P+ T N
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNS 296
Query: 106 VINCLCHLRRTAFGLSVLGLVFKT-----------------------------------G 130
VIN C R + G + K+ G
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
L T N+IV L +E ++ A++ R M + Q + +T ++ G C+ G + AV
Sbjct: 357 LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAV 416
Query: 191 LCMRNMVERHCEPNAVVYNAIM 212
R + E+ + V +N +M
Sbjct: 417 EFQRQISEKKLVEDIVCHNTLM 438
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D+AV F M++ P ++ + L + R I + S G ++ + +++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ LC R + L + K GL P + N ++ C + A M G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N T+ +I + G+ E ++ M+ER EP+ +Y ++++G
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/153 (18%), Positives = 62/153 (40%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D + + + + F ++ ++ + +F+ + + + ++ G+APD+ N +
Sbjct: 379 DHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL 438
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I C + +F G + T N ++ L E ++ M G
Sbjct: 439 IEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
+P+ + ++I G CK E+A+ R +ER
Sbjct: 499 EPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 50 VAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINC 109
V+ +QM P + + + V + Y A L G+APD+YT N+ IN
Sbjct: 271 VSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYING 330
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
LC L ++ + K G P T N ++ L +++ A T + ME G N
Sbjct: 331 LCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRN 390
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVER 199
S+TF +I+ + ++ + V+C ++E
Sbjct: 391 SHTFDIMISAYIEVDE----VVCAHGLLEE 416
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 57/147 (38%)
Query: 50 VAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINC 109
+ + + P ++D+ + F+ +S++ + V PD+ IV+
Sbjct: 236 IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQG 295
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
+ + + GL P T N +NGLC +N++ A+ M G +PN
Sbjct: 296 VIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNM 196
T+ +I K GD A + M
Sbjct: 356 VVTYNILIKALVKAGDLSRAKTLWKEM 382
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 54/128 (42%)
Query: 85 ISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNG 144
I ++ + +P + +V+ L R +SVL + + P ++ G
Sbjct: 236 IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQG 295
Query: 145 LCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
+ + + A + G P+ YT+ ING CK D E A+ M +M + EPN
Sbjct: 296 VIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 205 AVVYNAIM 212
V YN ++
Sbjct: 356 VVTYNILI 363
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 63.9 bits (154), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS--- 121
V+ +N++ +R+ ++ A L+ G PD+ + N +IN R + GL+
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA----RLKSGGLTPNL 280
Query: 122 ---VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIIN 178
+L +V +GLRP T NT+++ ++N+ AV ME QP+ +T+ A+I+
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 179 GFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + G A + + P+AV YN+++
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL 374
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLR-----PTTATLNTIVNGLCLENNVASAVTFTRHM 161
I+ C R+ + L L F T R P NT+VNG ++ A+ F + M
Sbjct: 164 IDAYCRARKMDYAL----LAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ TF +ING+C+ + A+ R M E+ CEPN V +N ++ G
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRG 272
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 71/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ F+ +M P V FN L R+ + A+ L + G P++ + N
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I + G+ + + + G R + AT +V+GLC E V A + N
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKR 328
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ + +G+++ C A+ M + ++ P + +++G
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG 377
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A +L P D+ SL + A+ +++ G P
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ L RT + + G+ P + T N ++ LC ++ A + G
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
Y+P+ T+ +++GF K G + + + M+++ P+ YN +MDG
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDG 482
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 71/173 (41%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R+ K A +AF + P V +N++ ++ A+ +R PD+
Sbjct: 169 RARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDV 228
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T NI+IN C + L + + + G P + NT++ G + V
Sbjct: 229 CTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYE 288
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G + + T +++G C+ G + A + +++ + P+ Y ++++
Sbjct: 289 MIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 38/214 (17%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
H L ++ K +D + QML P V +N + R L+
Sbjct: 230 HSLLGVKQYKLIDWV---YEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKD 286
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL--------- 145
G +PD+YT NI+++ L + L++L + + G+ P T+++GL
Sbjct: 287 GFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEAC 346
Query: 146 -----------CLENNVASAVTFT---------------RHMENAGYQPNSYTFGAIING 179
C + V V T + M G PN +T+ ++I G
Sbjct: 347 KYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRG 406
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
FC G + A ++ M R C PN VVY+ +++
Sbjct: 407 FCMAGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 3/164 (1%)
Query: 54 HQMLAANPF---PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
Q + + F P +N++ + K Y + ++ G PD+ T NIV+
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
L +T +L + K G P T N +++ L N +A+ HM G +P
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F +I+G + G E+ M V+ C P+ V Y ++ G
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 81 YAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNT 140
Y ++KR GV PD++T N +I+ LC + + G + G+ P +
Sbjct: 320 YGFMCDMVKR----GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 141 IVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH 200
I+ GLC+ +V A F M + P + +I+G+ + GDT SA+ + M+
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG 435
Query: 201 CEPNAVVYNAIMDG 214
+PN NA++ G
Sbjct: 436 VKPNVYTNNALIHG 449
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 39/206 (18%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LDAA+ +M+ + P + N L + + + A L++ G +P+ + N
Sbjct: 137 LDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNT 196
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC------------LEN---- 149
+I LC + L + + K G+RP T N IV+ LC LE
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 150 -----------------------NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
NV A+ + M +S + II G C G+
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIM 212
+A M +MV+R P+ YN ++
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLI 342
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 74/202 (36%), Gaps = 35/202 (17%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA F M+ P V +N+L + + + + A L + GVAPD + ++I
Sbjct: 318 AAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVII 377
Query: 108 NCLC-----------------------------------HLRRTAFGLSVLGLVFKTGLR 132
LC T+ LSVL L+ G++
Sbjct: 378 QGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVK 437
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P T N +++G + A M + P++ T+ ++ C +G A
Sbjct: 438 PNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQL 497
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
M+ R C+P+ + Y ++ G
Sbjct: 498 YDEMLRRGCQPDIITYTELVRG 519
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 139 NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
++I+ LCL+ + +A+ + M +G P T ++NG CK G E A +R M E
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 199 RHCEPNAVVYNAIMDG 214
PN V YN ++ G
Sbjct: 185 MGPSPNCVSYNTLIKG 200
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ + + G+ D+ I+I+ LC R L VL + G+ P T ++++
Sbjct: 32 AVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLIT 91
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
GLC +A A M++ PN TF A+I+ + K G + M++ +P
Sbjct: 92 GLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 151
Query: 204 NAVVYNAIMDG 214
N Y++++ G
Sbjct: 152 NVFTYSSLIYG 162
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ PDI T + ++N C + V G + K G++ +++ LC V A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + M++ G PN T+ ++I G CK G A + M + PN + ++A++D
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +M P V ++SL T + ++ A A + S + P++ T + +I+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+ + SV ++ + + P T ++++ GLC+ N V A+ M + G P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N T+ + NGF K + + + +M +R N V N ++ G
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKG 232
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
H+M + P V F++L A+ + S+ K + P+++T + +I LC
Sbjct: 106 LHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCM 165
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
R + +L L+ G P T +T+ NG + V + M G N+ +
Sbjct: 166 HNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 225
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I G+ + G + A+ M PN YN ++ G
Sbjct: 226 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 267
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ K G+ P T +++VNG CL N++ AV ME G + + +I+ CK
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ ++ M +R PN V Y++++ G
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITG 92
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 64/163 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ M++ P V +++L ++ I L+ GVA + + N
Sbjct: 169 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 228
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I + L V G + GL P + N ++ GL V A++ HM+
Sbjct: 229 LIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 288
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ T+ +I+G CK + A + + EP+ Y
Sbjct: 289 NDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 331
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 1/171 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K AV F M V+ N L + R K A L + P++ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTY 301
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++N C +R + + GL+P N ++ GL + A+ M++
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN ++ +I FCK E+A+ +MV+ +P+A VY ++ G
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 71/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN ++ L A ++ M+ P + N + + R++ + AI L S G
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ + I+I C + + +GL+P A ++ G + + +
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M+ G+ P+ T+ A+I E A M++ EP+ +N IM
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM 480
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+S+ K A F + L P + + L R ++ A + G
Sbjct: 270 LLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQG 328
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI N+++ L R+ + + + ++ G P + ++ C ++++ +A+
Sbjct: 329 LKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M ++G QP++ + +I GF ++ ++ M E+ P+ YNA++
Sbjct: 389 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS+ + +A+T+ + +S+++ + G+ + T I + + + + L+
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 128 KTGLRPTTATLNTIVNGLCLEN-NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
K + T+N +++ L + V F + E + PN T+ ++NG+C++ +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLLNGWCRVRNL 314
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A +M+++ +P+ V +N +++G
Sbjct: 315 IEAARIWNDMIDQGLKPDIVAHNVMLEG 342
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/165 (18%), Positives = 61/165 (36%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
+++ A+ +F M+ + P + L T K L+K G PD T N
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+I + + + + + + + P+ T N I+ + N M
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
G P+ ++ +I G G + A + M+++ + + YN
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+++ ++ A F M P P ++ F SL R A ++ + +G
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFP-PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC-LENNVASA 154
+ PDI +++ H + A ++ + K G P ++ LC E + A
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ ME G + + T+ A+I+GFCK G + + +M ++ P+ V Y IM
Sbjct: 327 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIM 384
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
S+ AP T ++I L + ++G + TG P +T ++ G+C+ V
Sbjct: 334 SAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVD 393
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A F M N GY P+ T+ + C+ T+ A+ MVE C P+ YN ++
Sbjct: 394 EAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 3/172 (1%)
Query: 46 LDAAVAFFHQML---AANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+D A F M+ +A P K F + +A+ LI R S+G PD+ T
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
VI +C + L + G P T N + LC A+ M
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMV 438
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P+ T+ +I+ F ++ D + A M +R C + Y A+++G
Sbjct: 439 ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMING 490
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%)
Query: 57 LAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRT 116
+ +N P V+ FN L R++ A L + + V P + T +I C +RR
Sbjct: 242 MDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRV 301
Query: 117 AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAI 176
+ VL + + N I++GL ++ A+ P T+ ++
Sbjct: 302 QIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSL 361
Query: 177 INGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
+ FCK GD A ++ M+ R +P YN
Sbjct: 362 VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 97 APDIYTLNIVINCLC---HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
A ++ L ++++ LC H+R + L +G + P+ N ++NG +
Sbjct: 209 ATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQ 268
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M+ +P T+G +I G+C++ + A+ + M E N +V+N I+D
Sbjct: 269 AEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID 328
Query: 214 G 214
G
Sbjct: 329 G 329
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 67/169 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A+ + P + +NSL + A ++K + GV P T N
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+T G+++ + + G P T + I+ LC + ++ A+ + M+N G
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG 455
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T +I+ C++ E A N V R P + + I +G
Sbjct: 456 IDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNG 504
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 1/173 (0%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
+K D A M P + FN + R A+ G PD+
Sbjct: 91 KVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVV 150
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT-RH 160
+ I+IN L + + + + ++G+ P +V GLC V A
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEE 210
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+++A + ++ + A+I+GFCK G E A M + CEP+ V YN +++
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 67/168 (39%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D F + + F V +++L R + A L + G+ ++ T +
Sbjct: 307 DKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I ++ +L + + GL P TI++ LC NV A M
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P++ ++ ++I+G C+ G A+ +M + C P+ + + I+ G
Sbjct: 427 TPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V ++N + + K + A+SL K + G PD T N + L + +L
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ +G +P T ++ ++ AV ME G +PN +G++INGF + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIM 212
E A+ R M E + N +V +++
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 68/169 (40%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K + A++ F M +P +NSLF +A A ++ SG P T
Sbjct: 529 KLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTY 588
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I L + + + + KTG++P +++NG V A+ + R ME
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G Q N ++I + K+G E A M + P+ N+++
Sbjct: 649 HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
ML + FP +NS+ + A ++ S G +PD+ T + +IN C +R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
G+ + + + G+ T T T+++G C ++ +A M + G P+ TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 176 IINGFCKIGDTESAVLCMRNM 196
++ G C + A + ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P T N +I+ C R +L + G P T +T++NG C V + +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G N+ T+ +I+GFC++GD ++A + M+ P+ + ++ ++ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ AV F +M + V FNSL + ++K S GV P+ + NI
Sbjct: 323 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 382
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ L V + K P T ++ C + + +A ++M G
Sbjct: 383 ILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 441
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
P+ +TF +ING C+ T+ A + + M+E P+ V + +
Sbjct: 442 VFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
LL+++ K + A F M + F P K ++ L + + A + + +
Sbjct: 209 LLSALCKSKNVRKAQEVFENM--RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA 266
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PDI T +I+++ LC R L ++ + + +PTT + +V+ EN + A
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
V ME +G + + F ++I FCK ++ ++ M + PN+ N I+
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V+ ++ + A+ + Y LI A ++ T IV+ ++ +
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLIN-AMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
++ K L P N +++ LC NV A +M + + P+S T+ ++ G+ K
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP 251
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ A R M++ C P+ V Y+ ++D
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVD 280
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 73/150 (48%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V+ N + A++ + A+ L+ A ++G++ TL +I+ L RT ++
Sbjct: 269 VQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE 328
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ ++G++P T N ++ G + A + ME G P+ +T+ +I+ + G
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ESA + ++ M +PN+ V++ ++ G
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Score = 57.0 bits (136), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++++ LD A+ F +ML+ P +N+L + + A + + G
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P T NI+IN R +LG + G+ P T T+V+ A+
Sbjct: 510 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 569
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M++ G +P+S + A+IN + + G +E AV R M +P+ + N++++
Sbjct: 570 ECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
S +TL+A A F ++ + P + +N+L +T A S++ GV+PD +
Sbjct: 317 SGRTLEAE-ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 375
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T +++I+ + R VL + ++P + + ++ G + M
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ G +P+ + +I+ F K + A+ M+ EP+ V +N ++D
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 64/164 (39%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F M PC +N + + + L+ + S G+ P++ T +++
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
R + L + GL+P++ N ++N AV R M + G +P
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ ++IN F + A ++ M E +P+ V Y +M
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 69/169 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++NS + D +M + P V +L ++ + AI ++ S G
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P N +IN + ++ ++ GL+P+ LN+++N + A A
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
++M+ G +P+ T+ ++ ++ + + M+ C+P+
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 76 ARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTT 135
AR + AI + G + N +++ L R V + K P
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232
Query: 136 ATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRN 195
+ ++ G E N+ R M++ G++P+ +G IIN CK E A+
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 196 MVERHCEPNAVVYNAIMDG 214
M +R+C+P+ ++ ++++G
Sbjct: 293 MEQRNCKPSPHIFCSLING 311
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/178 (18%), Positives = 73/178 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L+++ + + A F +M P +K + L + + + +
Sbjct: 202 RMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE 261
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PD+ I+IN C ++ + + + +P+ +++NGL E + A
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ F +++G+ + T+ A++ +C E A + M + PNA Y+ I+
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 20/179 (11%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPC-VKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L+N + S K L+ A+ FF + ++ FP +N+L ++ A +
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSG-FPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLK 366
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV P+ T +I+++ L ++R+ V + PT +T +V C + + A
Sbjct: 367 GVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMA 423
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ M+ G P + F ++I LC N ++ CE +N ++D
Sbjct: 424 IKIWDEMKGKGVLPGMHMFSSLITA-----------LCHENKLDEACE----YFNEMLD 467
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 1/171 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K AV F M V+ N L + R K A L + P++ T
Sbjct: 242 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTY 300
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++N C +R + + GL+P N ++ GL + A+ M++
Sbjct: 301 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN ++ +I FCK E+A+ +MV+ +P+A VY ++ G
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 69/177 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN ++ L A ++ M+ P + N + + R+ + AI L S G
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ + I+I C + + +GL+P A ++ G + + +
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M+ G+ P+ T+ A+I E M++ EP+ +N IM
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+S+ K A F + L P + + L R ++ A + G
Sbjct: 269 LLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHG 327
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI N+++ L + + + + ++ G P + ++ C ++++ +A+
Sbjct: 328 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 387
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M ++G QP++ + +I GF ++ ++ M E+ P+ YNA++
Sbjct: 388 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/165 (18%), Positives = 62/165 (37%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
+++ A+ +F M+ + P + L T K L+K G PD T N
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+I + + + G + + + + P+ T N I+ + N M
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
G P+ ++ +I G G + A + M+++ + + YN
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS+ + +A+T+ + +S+++ + G+ + T I + + + + L+
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 128 KTGLRPTTATLNTIVNGLCLEN-NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
K + T+N +++ L + V F + E + PN T+ ++NG+C++ +
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLLNGWCRVRNL 313
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A +M++ +P+ V +N +++G
Sbjct: 314 IEAARIWNDMIDHGLKPDIVAHNVMLEG 341
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 1/171 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K AV F M V+ N L + R K A L + P++ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTY 301
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++N C +R + + GL+P N ++ GL + A+ M++
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 361
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN ++ +I FCK E+A+ +MV+ +P+A VY ++ G
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 69/177 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN ++ L A ++ M+ P + N + + R+ + AI L S G
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ + I+I C + + +GL+P A ++ G + + +
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M+ G+ P+ T+ A+I E M++ EP+ +N IM
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+S+ K A F + L P + + L R ++ A + G
Sbjct: 270 LLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHG 328
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI N+++ L + + + + ++ G P + ++ C ++++ +A+
Sbjct: 329 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M ++G QP++ + +I GF ++ ++ M E+ P+ YNA++
Sbjct: 389 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/165 (18%), Positives = 62/165 (37%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
+++ A+ +F M+ + P + L T K L+K G PD T N
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+I + + + G + + + + P+ T N I+ + N M
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
G P+ ++ +I G G + A + M+++ + + YN
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS+ + +A+T+ + +S+++ + G+ + T I + + + + L+
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 128 KTGLRPTTATLNTIVNGLCLEN-NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
K + T+N +++ L + V F + E + PN T+ ++NG+C++ +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLLNGWCRVRNL 314
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A +M++ +P+ V +N +++G
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEG 342
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 60.8 bits (146), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 71/179 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S L ++ + + +M P + +N L + +A + + S
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI T N +I C +T + L + G T T++ +++ S V
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+ G Q + F +I G CK G NM+ + +PN +Y ++DG
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ F M+ P V + L A++ AI L+ R G PD+ T ++
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
V+N LC R L GL + +++++GL V A M G
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH-CEPNAVVYNAIMDG 214
+SY + A+I+ F K + A+ + M E C+ Y ++ G
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 62/134 (46%)
Query: 81 YAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNT 140
+ + ++L + G+ + ++VI LC + G +V + + G +P A
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 141 IVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH 200
+++G +V A+ M + G++P+ T+ ++NG CK G E A+
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 201 CEPNAVVYNAIMDG 214
N++ Y++++DG
Sbjct: 428 LAINSMFYSSLIDG 441
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 8/168 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKR-A 91
L++ + +D A F +M C +D +N+L + + AI+L KR
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKG---CTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 92 HSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
G +YT I+++ + R L + ++ G+ PT A + GLCL V
Sbjct: 495 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 554
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
A A + G ++ +IN CK G + A + ER
Sbjct: 555 ARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITER 601
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+++S+ ++ + A A M++ P P FN + ++T A ++K S
Sbjct: 377 DVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESR 436
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ PD+YT ++I+ +L K + + T + ++ G C A
Sbjct: 437 GLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEA 496
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFC-KIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ M+ G QPN+ + +I FC K D E A + M ++ NA+ I
Sbjct: 497 LKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI 554
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 90 RAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLEN 149
A G+ P + VI+ LC +R ++L + G P A N +V+
Sbjct: 366 EARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTG 421
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
++ A + ME+ G +P+ YT+ II+G+ K G + A + ++H + + V Y+
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYH 481
Query: 210 AIMDG 214
A++ G
Sbjct: 482 ALIRG 486
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 4/170 (2%)
Query: 47 DAAVAFFHQMLAANPFPC----VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
D + F +ML +K F+ + + R ++ A +L+ S G AP
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 409
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N+V++ VL L+ GL+P T I++G + A +
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK 469
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + T+ A+I G+CKI + + A+ + M +PNA YN ++
Sbjct: 470 KKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 68 FNSLFTFVARTKHYAAAISL---IKRAHSSG--VAPDIYTLNIVINCLCHLRRTAFGLSV 122
+N + ++ + A+ L +K+ H+ +A ++ T N+++N C + + V
Sbjct: 313 YNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV 372
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ P T + N ++N LC +A A ME +P+ YT+G +++ K
Sbjct: 373 FRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFK 432
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G + + MVE + PN VYN + D
Sbjct: 433 EGKIDEGAAYYKTMVESNLRPNLAVYNRLQD 463
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
H+L IR L+ A + + +N P + N++ R Y A + L + +
Sbjct: 101 HILKLIRE-NDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQA 159
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTG-LRPTTATLNTIVNGLCLENNVAS 153
G+AP+I T N++ +R+ L L L P+ AT +V GL +N+
Sbjct: 160 GIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEK 219
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE--PNAVVYNAI 211
A+ M G+ + + ++ G K D + + + + E+ + VVY +
Sbjct: 220 AMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQL 279
Query: 212 MDG 214
M G
Sbjct: 280 MKG 282
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A F M+ +NSL +F K + ++R S + PD+ + ++
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQR---SDIQPDVVSYALL 320
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I RR LSV + G+RPT N +++ + V A T + M
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +++ +++ + D E A + + EPN V Y ++ G
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A F M+ +NSL +F K + ++R S + PD+ + ++
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQR---SDIQPDVVSYALL 327
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I RR LSV + G+RPT N +++ + V A T + M
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +++ +++ + D E A + + EPN V Y ++ G
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSS-GVAPDIYTLNIVINCLC------HLRR 115
P FNS+ R + + G +P++Y+ N+++ C +
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ V G+V+ NT++ GLC V A R M G + T+
Sbjct: 303 VWEEMKVRGVVY------DIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++NG+CK GD +S ++ R M + E + + A+++G
Sbjct: 357 LVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 71/163 (43%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FF +M P FNSL +R + AA +L + + D+++ N +++ +C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ +L + + P + +T+++G A+ M G +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ +++ + K+G +E A+ +R M + + V YNA++ G
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 65/146 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + + A+ +++ S G+ D+ T N ++ + V +
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ + P T +T+++G A+ R ++AG + + + A+I+ CK G
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
SAV + M + PN V YN+I+D
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIID 592
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 74/178 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL++I +D A QM P V ++++ A+ + A++L G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+A D + N +++ + R+ L +L + G++ T N ++ G +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+ PN T+ +I+G+ K G + A+ R + V+Y+A++D
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG--VAPDIYTL 103
+ A+A F++M + P V +N++ + R ++ A L+ + G PD YT
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 104 NIVINCLCH----------LRRTAFGLSVL--GLVFKTGLRPTTATLNTIVNGLCLENNV 151
I+I+ C +RR + + + ++F+ G P T N +++G C N +
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFR-GFVPDVVTYNCLIDGCCKTNRI 299
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE-RHCEPNAVVYNA 210
A+ M+ G PN T+ + I + + E A+ MR M + H P + Y
Sbjct: 300 GRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTP 359
Query: 211 IM 212
++
Sbjct: 360 LI 361
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLC---HLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
SL ++ SG+ PD++ LN ++ H+ + +V+ P + T + ++
Sbjct: 274 SLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDC--EPNSFTYDYLI 331
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+GLC + +A M+ G+ PN ++ +++N F G+ + AV C+ M+E
Sbjct: 332 HGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV 391
Query: 203 PNAVVYNAIMD 213
+ + Y ++D
Sbjct: 392 VDFISYRTLVD 402
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 80 HYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLN 139
+ A+ + R G+ + ++N++++ LC +R VL L K+ + P T N
Sbjct: 170 EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFN 228
Query: 140 TIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
++G C N V A+ + M+ G++P ++ II +C+ + + M
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 200 HCEPNAVVYNAIM 212
PN++ Y IM
Sbjct: 289 GSPPNSITYTTIM 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
S + P+ +T NI I+ C R L + + G RP + TI+ C +
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
ME G PNS T+ I++ + E A+ M C+P+++ YN ++
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 80 HYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLN 139
+ A+ + R G+ + ++N++++ LC +R VL L K+ + P T N
Sbjct: 170 EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFN 228
Query: 140 TIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
++G C N V A+ + M+ G++P ++ II +C+ + + M
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 200 HCEPNAVVYNAIM 212
PN++ Y IM
Sbjct: 289 GSPPNSITYTTIM 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
S + P+ +T NI I+ C R L + + G RP + TI+ C +
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
ME G PNS T+ I++ + E A+ M C+P+++ YN ++
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 121 SVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
V ++ + G+ P T T N + N C ++N F ME G++P+ T+ +++ +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ G + A + M R P+ V Y +++ G
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 61/147 (41%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN L ++ +++ G PD+ T N +++ C R + +++
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ + P T +++ GLC + V A M + G +P+ ++ +I +CK G +
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + M+ P+ I++G
Sbjct: 359 QSKKLLHEMLGNSVVPDRFTCKVIVEG 385
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
+L AVA ++ P + FN+L + + + VA DI T N
Sbjct: 195 SLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYN 254
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+ L + ++ +++ G + +GL+P + N ++ G E + A + + +
Sbjct: 255 ARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKH 314
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAV 190
GY+P+ TF ++ CK GD ESA+
Sbjct: 315 GYRPDKATFALLLPAMCKAGDFESAI 340
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIK-RAHSSGVAPDIYTL 103
+L+ + F +M P K +N++ +A+ + A +L+K G+ P++ T
Sbjct: 317 SLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTY 376
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +I LC R+T V + + GL PT T + + L V + R M
Sbjct: 377 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKM-- 434
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +P T+ +I C+ D ++ +L M E+ P+ Y ++ G
Sbjct: 435 -GCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 484
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 88/253 (34%), Gaps = 74/253 (29%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + A + ML N P + + L +++ A+ L+ S G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVL-------------------------GLVF--- 127
++PD Y N VI LC G S+ GLV
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 128 -------KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME------------------ 162
K+G P+ AT N +++GLC + A ME
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 163 ---------------------NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
+ G P+ ++ +INGFC+ GD + A+ + + +
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 202 EPNAVVYNAIMDG 214
P++V YN +++G
Sbjct: 549 SPDSVTYNTLING 561
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHSS 94
L+++ + + AV F +M + P V +N + + R + + A ++
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
+P++YT I+++ L RT+ + + G+ P T +++GLC + A
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
M+ +G P+S A+++GFCK+G A +R
Sbjct: 253 RKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 59/150 (39%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
++ ++SL + R + Y A L + PDI I+I L + L +L
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G+ P T N ++ LC + + M P++ T +I C+ G
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + + C P+ +NA++DG
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 61/166 (36%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F++M + +P N+L + A L++ G + + +
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ L RR + + K ++P ++ GL + A+ M + G
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P++Y + A+I C G E M E P+A + ++
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 31/210 (14%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L+S L +D A+ +M P + +NSL + A AI+++KR +G
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF-------------------KTGLRP--- 133
+ P +++ ++ + G ++ G + KTG P
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR 280
Query: 134 ---------TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
N++V+GL + A ME G +P++ T+ ++ +G+ +G
Sbjct: 281 MVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E A+ + M E+ PN V + AI G
Sbjct: 341 KPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 119 GLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIIN 178
L+ L + + G+ P+ T+++G + + A R M G PN +T+ ++I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 179 GFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G C G+ A ++ M R C PN VVY+ ++
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 801
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA++ +M+ P +NS+ + + SL+ PD+ T IV+
Sbjct: 495 AALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVV 554
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA-VTFTRHMENAGY 166
N LC +++ + + GLRPT A ++I+ L + V A TF + +E +G
Sbjct: 555 NELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE-SGI 613
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
QP+ + +IN + + G + A + +V+ P++ Y ++ G
Sbjct: 614 QPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 117 AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAI 176
+F + V+G V K + P NTI+ G C + A M+ G PN T+ +
Sbjct: 777 SFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTIL 835
Query: 177 INGFCKIGDTESAVLCMRNMVE-RHCEPNAVVYNAIMDG 214
+ + GD ESA+ ++ E +CEP+ V+Y+ ++ G
Sbjct: 836 MKSHIEAGDIESAI----DLFEGTNCEPDQVMYSTLLKG 870
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCH---------LRRTAFGLSVLGLVFKTGLRPT 134
A + K S GV PDI T NI+++ LC + G + + G++P
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPN 94
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
T T+++G C + A T R M+ G P+S T+ +I + GD ++ ++
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 195 NMVERHCE--PNAVVYNAIMD 213
M R C +A Y + D
Sbjct: 155 EM--RSCRFAGDASTYGLVTD 173
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D A F +L + P V+ +N + F + + +I+R G+ PD T N
Sbjct: 30 FDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRR----GLVPDTITYNS 85
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC + A V + +T NT++NG C V + M G
Sbjct: 86 MIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRG 136
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N T+ +I+GF ++GD +A+ + MV +++ + I+
Sbjct: 137 IVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLS--VLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
SG+ PD+ T N++I R ++ G + + + + GL P T T N++++GLC +N +
Sbjct: 43 SGLQPDVQTYNMMI------RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKL 96
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
A A ++ TF +ING+CK + + M R N + Y +
Sbjct: 97 AQARKVSKSCS---------TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTL 147
Query: 212 MDG 214
+ G
Sbjct: 148 IHG 150
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 5/176 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+LN L + A F+ ++A+ P V + ++ + + A+ L + +
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ N VI+ LC +R L V + + G P T N+++ LC
Sbjct: 313 RNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVW 372
Query: 156 TFTRHMENAGY--QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
ME G PN TF ++ + D + + + M + CE + +YN
Sbjct: 373 ELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYN 425
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+S PD+ + +IN L + + + ++ T P N +++ LC + +
Sbjct: 275 ASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIP 334
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER--HCEPNAVVYNA 210
A+ R + G PN T+ +++ CKI TE + M + C PN V ++
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSY 394
Query: 211 IM 212
++
Sbjct: 395 LL 396
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 1/180 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L+ + ++ + F +M + F K + L A A+ + +R
Sbjct: 148 EILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEF 207
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ D+ + ++ LC + F L + +N I+NG C+ NV A
Sbjct: 208 GIDDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEA 266
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F + + + +P+ ++G +IN K G A+ R M + P+ + N ++D
Sbjct: 267 KRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDA 326
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P T +++G + ++ A T M G PN T+ A+I G CK+G+ + A
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+ + ++ PNA+ YN ++DG
Sbjct: 813 LHKLPQKGITPNAITYNTLIDG 834
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT------GLRPTTATLNTIVNGLCLEN 149
V+PD++T +IV+N C G +VF GL T N+++NG +
Sbjct: 221 VSPDVFTCSIVVNAYCR-----SGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
+V R M G N T+ ++I G+CK G E A + E+ + +Y
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 210 AIMDG 214
+MDG
Sbjct: 336 VLMDG 340
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 54/116 (46%)
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
D + ++++ C + + V + + G+R T N+++NG C + A
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + +P+ +T+ +++G+C+ G + A+ M ++ P + YN ++ G
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 70/169 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ QM P V +N L +R + +SL K GV D + +
Sbjct: 417 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ L L + + V GL T TLN +++GLC V A ++
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P T+ A+ +G+ K+G+ + A M + P +YN ++ G
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS-GVAPDIYTLNIVI 107
A+ + QM++ P V + + R+ + A+ K SS G+ ++ T N +I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
N + VL L+ + G+ T +++ G C + + A ++
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +G +++G+C+ G AV NM+E N + N++++G
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 20/112 (17%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT----------GLRPTTATLNTIVNGLCL 147
PD YT I+I+ G ++ G + K G+ P T N ++ GLC
Sbjct: 753 PDEYTYTILIH----------GCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCK 802
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
NV A + G PN+ T+ +I+G K G+ A+ M+E+
Sbjct: 803 LGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
A SL K+ S+GV PD + LN++I + V + G P T + +V
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
G+C + V + F + M+ G PN + +I + AV + +M+
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 203 PNAVVYNAIM 212
P+ + YN ++
Sbjct: 326 PDMLTYNTVL 335
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 10/177 (5%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL ++ K++ A +H L P ++ FN L + ++ A +K G
Sbjct: 186 LLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK---GKG 241
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N +I+ C R ++ + + P T T++ GL L A
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFC---KIGDTESAVLCMRNMVERHCEPNAVVYN 209
+ M+ G P+ + A I FC ++GD + V MV++ PNA YN
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV---DEMVKKGLSPNATTYN 355
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS+ + + ++ A ++ + + A DI T N++I L + R +VL +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K G NT++N L + A HM++ G P+ ++ +I K G +
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A ++ M++ C PN V + I+D
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT-DTILD 777
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Query: 83 AAISLIKR------AHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTA 136
AA+SL K + S PDI T N +I+ LC + L V + +G P +
Sbjct: 266 AALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNS 325
Query: 137 TLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
T ++ G C + A+ M+ G+ P++ + +++G K A M
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 197 VERHCEPNAVVYNAIMDG 214
V+ + YN ++DG
Sbjct: 386 VQEGVRASCWTYNILIDG 403
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 69/165 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ + +M P +N L + + A L ++ GV +T NI
Sbjct: 340 MDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ L R G ++ + K G T + + LC E + AV ME G
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRG 459
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
+ + T +++ GF K G + M+++ E + PN + +NA
Sbjct: 460 FSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 5/181 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLF-TFVARTKHYAAAISLIKRAHS 93
+L+ K + ++ F++ML N P K N + V+ + A L K +
Sbjct: 124 YLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
GV P+ + N+++ C + + G + + + P + ++ G C + V
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A+ M N G+ P+ +I G C G + + M+ + P+ V N ++
Sbjct: 244 AMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 299
Query: 214 G 214
G
Sbjct: 300 G 300
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+++ ++ A F M P ++ F SL R A ++ + + +G
Sbjct: 224 LLDALCKHGSVKDAAKLFEDMRMRFPVN-LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI +++ + + A +L + + G P ++ LC + + A+
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
ME + + T+ A+++GFCK G + + + +M+++ P+ + Y IM
Sbjct: 343 KVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 35/214 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD-FNSLFTFVARTKHYAAAISLIKRAHSS 94
++ + ++ A +M NP + F L A AI ++
Sbjct: 153 MVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKF 212
Query: 95 GVAPDIYTLNIVINCLC------------------------HLRRTAFGLSVLGLVFKT- 129
G PD Y +++ LC + +G +G + +
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAK 272
Query: 130 ---------GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
G P +++G +A A R M G++PN+ + +I
Sbjct: 273 YVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQAL 332
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
CK+ E A+ M CE + V Y A++ G
Sbjct: 333 CKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 72/170 (42%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
S + D ++ ++ +ML P ++ ++ L + + + + + A+ + + S GV P
Sbjct: 337 SARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTG 396
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
+ + LC + + K G R + + ++ L + M
Sbjct: 397 LVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ +GY + + I++G C IG E+AVL M + + PN VY+ +
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ F + + + FN+L + H +AA S+ A + D + NI+I+
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMIS 263
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L VL + ++G P + + ++ GL + +V ++++ G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ + A+I F D + ++ R M++ CEPN Y+ ++ G
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 73 TFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLR 132
+FV R + AI L + + S GV + N ++ CLC + SV K G
Sbjct: 195 SFV-RVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNI 251
Query: 133 P-TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVL 191
P + + N +++G V + M +G+ P+ ++ +I G + G +V
Sbjct: 252 PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE 311
Query: 192 CMRNMVERHCEPNAVVYNAIM 212
N+ + P+A VYNA++
Sbjct: 312 IFDNIKHKGNVPDANVYNAMI 332
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + K + A +LI+R G+ PD T I++N C + L +
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G P + ++ GL + SA M G+ P+ TF +I K G+ E
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 66/177 (37%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N S + A F +M P + + L + + +A ++ + G
Sbjct: 223 LVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGG 282
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T NI+I + F + + K GL T T++ + + A
Sbjct: 283 FVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAF 342
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G++P + II G C+ G + A +M + PN VY ++
Sbjct: 343 RLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI 399
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 4/151 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N + A A LIK G+ PD+ T +IN C+ + + +
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG----YQPNSYTFGAIINGFCKI 183
K + T + I+ G+C ++ A+ ME PN+ T+ +I FC+
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E A+L + M R C PN V ++ G
Sbjct: 288 RRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 12/159 (7%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
F VK + T + A+ ++++ V D N+VI L L+
Sbjct: 127 FVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVI----RLFADKGDLN 182
Query: 122 VLGLVFK----TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAII 177
+ ++ K GL P T +++NG C + A + M NS T+ I+
Sbjct: 183 IADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRIL 242
Query: 178 NGFCKIGDTESAVLCMRNMVERH----CEPNAVVYNAIM 212
G CK GD E A+ + M + PNAV Y ++
Sbjct: 243 EGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVI 281
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K G+RP T N ++ G+C N+ A + ME G PN Y++ +I+ C E
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672
Query: 188 SAVLCMRNMVERHCEPNAVVYNAI 211
V + M+++ EP+ + A+
Sbjct: 673 EVVKLYKEMLDKEIEPDGYTHRAL 696
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 4/179 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L +R + ++ A A + M+ P V FN++ + +
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ T NI+IN + G + ++G T + N ++ G C + A
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T M NAG P + T+ I C G + A R ++ P+ V YN +M G
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHG 383
Score = 50.4 bits (119), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 48/118 (40%)
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
APD+ N+ I+ LC + + +F+ GL P T T++ G A
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M P+ T+ +I G K G E A M +R PN + +NA++ G
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 4/163 (2%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D A +ML A +P +N + A L+ SS APD+ + N
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL----SSMAAPDVVSYNT 379
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ + + + + + P+ T NT+++GLC N+ A M
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
P+ T+ ++ GF K G+ A M+ + +P+ Y
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 1/167 (0%)
Query: 47 DAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D A +M+A + P + +N + + + AI ++ G+ PD T
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
VI + ++ + + L P+ T ++ G + A ++ M+ G
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+PN T A++ G CK G+ + A + M E PN Y ++
Sbjct: 616 VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 2/172 (1%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS-GVAPDIYT 102
K + A F +M+ + + +L + +R+ + AA +L++R SS PD++T
Sbjct: 164 KQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHT 223
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENN-VASAVTFTRHM 161
+I+I + +L + + G+RP T T NT+++ V T + +
Sbjct: 224 YSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQML 283
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+P+S+T + + F G E C EPN +N ++D
Sbjct: 284 GEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLD 335
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV + T N++IN LC +RRT +++ G + + G +P T ++ L +
Sbjct: 317 GVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEG 376
Query: 155 VTFTRHMENAGYQP--NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M++AGY N + + C I E A+ ++M C+P Y+ +M
Sbjct: 377 DEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLM 436
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Query: 45 TLDAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
++D ++ F + L N F P + FN+L R + + + S ++P+I +
Sbjct: 208 SMDDILSIFEE-LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N + L ++ L+++ ++ G+ P T N ++ ++NN+ + M+
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE 326
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G P++ T+ +I CK GD + AV ++ +Y +++
Sbjct: 327 KGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVE 376
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHS 93
+L+N + + ++ F +M P V +N++ + +K H + S + +
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
V+P +T +I+I+ C R L +L + + G P A +++N L +
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A + ++ +S + +I F K G AV M + P+ YNA+M
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 214 G 214
G
Sbjct: 523 G 523
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L AV F++M P V +N+L + + + A SL+++ +G DI + NI
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N + + + +G++P T NT++ A R M++ G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Query: 166 YQPNSYTFGAIIN 178
++ ++ T+ +I++
Sbjct: 615 FEYDAITYSSILD 627
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 4/180 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
H+++ + L ++ + +M P ++ +NSL + R + A+ L+K+ +
Sbjct: 299 HMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEE 358
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ PD T N +I LC + +VL + L PT T + + + N
Sbjct: 359 GLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKT 414
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+ + P TF I+ K E+A+ M N +Y A + G
Sbjct: 415 LEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQG 474
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTLNIV 106
A+ F +M P F L T + K + A + SG PD +
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+ CLC + T S L + K G P T + + LC + A++ E
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ YT+G+I++G + GD + A+ + +M E +P VY +++
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLI 896
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 71/178 (39%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
+ S L LD A +M + P V + +L + + + + L G
Sbjct: 184 IKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGC 243
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
P++ T N+ I L + RR +L L+ K + P + T N ++ G L A
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAER 303
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GY+PN + +I+ CK G+ + A ++ + + PN ++ G
Sbjct: 304 VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ + F +M P + +N+L + A A + + + G+ PD+ T + +
Sbjct: 229 EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+ LRR +LG + G P + N ++ ++ A+ M+ AG
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN+ T+ ++N F + G + M + +P+A YN +++
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 5/172 (2%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD + F +M + V + +L R Y ++ L+ R + ++P I T N
Sbjct: 157 LDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT 216
Query: 106 VINCLCHLRRTAFGLSVLGLVFKT---GLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
VIN GL LGL + G++P T NT+++ + A R M
Sbjct: 217 VINACARGGLDWEGL--LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN 274
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G P+ T+ ++ F K+ E + M P+ YN +++
Sbjct: 275 DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 87 LIKRAHS----SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
L++R HS V P+ +I ++ ++LG + L P ++ N I+
Sbjct: 426 LVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCIL 485
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIIN 178
G E NV+SA+ + M+ AG +P+S TFG +IN
Sbjct: 486 AGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLIN 521
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 63/165 (38%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
A +M + P + FN L AR + + + G+ P N ++
Sbjct: 357 EAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMV 416
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+ + +L G P T + ++ G N++ A+ ME
Sbjct: 417 KSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMS 476
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P F ++I G C G E+ ++ M +R EPNA +Y+A++
Sbjct: 477 PGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALI 521
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
A L+ SGV+P T N +I GL ++ GL P+ + N +V
Sbjct: 357 EAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMV 416
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+ NV A + G+ P+ +T+ +I GF + D + A+ M R
Sbjct: 417 KSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMS 476
Query: 203 PNAVVYNAIMDG 214
P V+ +++ G
Sbjct: 477 PGFEVFRSLIVG 488
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 67/171 (39%), Gaps = 7/171 (4%)
Query: 47 DAAVA--FFHQMLAANPFPCVKDFNSLFTF---VARTKHYAAAISLIKRAHSSGVAPDIY 101
DAAVA FFH + DF + F + R H+ AA L + S G P
Sbjct: 137 DAAVAAKFFHWAGKQKGYK--HDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEK 194
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
I+I RR V + K G +P N I++ L A+
Sbjct: 195 QFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDF 254
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G S TF ++ G CK G E + ++ M E C+P+ Y A++
Sbjct: 255 KEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMI 305
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 61 PFPCVKDFNSLFTFVARTKHYAAAISLIKRAH-SSGVAPDIYTLNIVINCLCHLRRTAFG 119
P P V + ++ + ++ Y A+ L H G+ PD T V+ +LRR G
Sbjct: 225 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 284
Query: 120 LSVLGLVFKTGLRPTTATLNTIVN--GLCLENNVASAVTFTRHMENAGYQPNSYTFGAII 177
+ G + G+ +++++ G C +V R + N + NS ++ A++
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKC------GSVREARQVFNGMSKKNSVSWSALL 338
Query: 178 NGFCKIGDTESAVLCMRNMVER 199
G+C+ G+ E A+ R M E+
Sbjct: 339 GGYCQNGEHEKAIEIFREMEEK 360
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 68 FNSLFTF-VARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS-VLGL 125
++SL T+ + + + ++++R SG P+ T ++ + RR + ++ ++
Sbjct: 102 YSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWLERRRGSQSVADIINE 161
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ G P T T N +V+ LC + + A+ M AG P+ ++GA+IN C
Sbjct: 162 MKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARK 221
Query: 186 TESAVLCMRNMVER 199
T V ++ MV +
Sbjct: 222 TTDVVKIVKEMVSK 235
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL 145
++KR G P+ T I I+ C R L + + + T L T+++G
Sbjct: 235 EMVKR----GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGS 290
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
+ N A + G P+ + A+++ K GD A+ M+ M E+ EP++
Sbjct: 291 GVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDS 350
Query: 206 VVYNAIMDG 214
V ++++ G
Sbjct: 351 VTFHSMFIG 359
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 51.2 bits (121), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 68/177 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N K A +M A P +++L + + A+S+
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
A D+ T NI+I+ L + + K + P + NTI+ A+
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R M+ + N T+ +I + K + E A ++ M R EPNA+ Y+ I+
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 48/117 (41%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD T NI+I+ C R+ +++ L+ T P T + V C E +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M G PN T+ +++ K A+ M E C P+A Y++++
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 32/163 (19%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
A+ L K S + D+ N VI + + FG+ V + + G P AT NTI+
Sbjct: 242 KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTII 301
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYT-----------------FGAIING------ 179
LC + + A M G QP+S T FG +I
Sbjct: 302 KLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKM 361
Query: 180 ---------FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
F + G + + + M E P++ YNA++D
Sbjct: 362 DTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVID 404
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 5/151 (3%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS-VLGLV 126
++ L + + + A+ L +SG PD N +I H R A L V G +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 127 FK-TGL---RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
K G+ +P T N ++ V + ++ + P+ YTF +++ + K
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G + + M C+P+ + +N ++D
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 5/151 (3%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS-VLGLV 126
++ L + + + A+ L +SG PD N +I H R A L V G +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 127 FK-TGL---RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
K G+ +P T N ++ V + ++ + P+ YTF +++ + K
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G + + M C+P+ + +N ++D
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 48/114 (42%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N F +++ A L++ G+ PD+ +I+ C + L ++ +
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
G+ P T N +V+GL + + M+ G +PN+ T II G C
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+L + + P N I++ LC A + +E+ G++ + TFG +I C
Sbjct: 310 LLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCC 369
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GD + AVL + ++ + +P+ YNAI+ G
Sbjct: 370 YEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSG 402
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 14/185 (7%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAH--- 92
+LNS+R + FF+ + + + FP F + ++ + LI+
Sbjct: 159 VLNSLREWQKTHT---FFNWVKSKSLFPMETIF---YNVTMKSLRFGRQFQLIEEMALEM 212
Query: 93 -SSGVAPDIYTLNIVINCL--CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLEN 149
GV D T + +I C C+L A + ++KTGL P T + I++
Sbjct: 213 VKDGVELDNITYSTIITCAKRCNLYNKA--IEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
V ++ G++P++ F + F + GD + ++ M +PN VVYN
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 210 AIMDG 214
+++
Sbjct: 331 TLLEA 335
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 2/162 (1%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+ L PC+ ++++ T + ++ S G P + + LC
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 115 RTAFGLSVLGLVFKTG-LRPTTATLNTIVNGLCLENNVASAVTFTRHM-ENAGYQPNSYT 172
+ +SV+ G PT N ++ GLC + AV + + M + N T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +++G C+ G A M M+ + P Y+ ++ G
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 2/162 (1%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+ L PC+ ++++ T + ++ S G P + + LC
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 115 RTAFGLSVLGLVFKTG-LRPTTATLNTIVNGLCLENNVASAVTFTRHM-ENAGYQPNSYT 172
+ +SV+ G PT N ++ GLC + AV + + M + N T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +++G C+ G A M M+ + P Y+ ++ G
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 58/124 (46%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A S++ ++G +P+I N +I + + + + GL P + +++
Sbjct: 333 AESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIE 392
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G +N A + + ++ GY+PNS+ +IN K GD + A+ + +M C+
Sbjct: 393 GWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQY 452
Query: 204 NAVV 207
++++
Sbjct: 453 SSIL 456
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 61/141 (43%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
+NS D A + + M + P F++L K A +++ A S G+
Sbjct: 651 VNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGI 710
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
+ + ++ C+ + L + + LRPT +T+N ++ LC N + A+
Sbjct: 711 RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAME 770
Query: 157 FTRHMENAGYQPNSYTFGAII 177
+ ++ G +PN+ T+ ++
Sbjct: 771 YLDEIKTLGLKPNTITYSMLM 791
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 54/115 (46%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
P + T N++++ + VL LV ++G+ T+++ V +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M N+G + N +TFGA+I+G + G A + ++ +P+ VV+NA++
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALI 579
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 19/159 (11%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+ P P +D + +F K+ G+ P+ + ++ LC
Sbjct: 105 EQYPQEPLPPPEDSDEIF----------------KKMKEGGLIPNAVAM---LDGLCKDG 145
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
+ + GL+ G P +V C + + A R M+N G PN++++G
Sbjct: 146 LVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYG 205
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ G + AV M+E PN + ++D
Sbjct: 206 VLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVD 244
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 19/159 (11%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+ P P +D + +F K+ G+ P+ + ++ LC
Sbjct: 105 EQYPQEPLPPPEDSDEIF----------------KKMKEGGLIPNAVAM---LDGLCKDG 145
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
+ + GL+ G P +V C + + A R M+N G PN++++G
Sbjct: 146 LVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYG 205
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ G + AV M+E PN + ++D
Sbjct: 206 VLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVD 244
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 13/190 (6%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFP-------CVKDFNSLFTFVARTKHYAAAISL 87
HL+ + K AA+ + +L P P V FN L + ++ + + L
Sbjct: 386 HLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRL 445
Query: 88 IKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCL 147
+ + G+ P N V+ T + + + G +PT + +++ L
Sbjct: 446 LNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEK 505
Query: 148 ENNVASAVTFTRHMENAGYQPNSY---TFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
A HM G +PN Y T +++ G K ++ ++ M + EP+
Sbjct: 506 GKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT---LLKEMASKGIEPS 562
Query: 205 AVVYNAIMDG 214
V +NA++ G
Sbjct: 563 VVTFNAVISG 572
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 63/152 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N++ ++ AAI + K +G P + + +++ L + V
Sbjct: 456 PQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRV 515
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K G+ P T+ + L + T + M + G +P+ TF A+I+G +
Sbjct: 516 WNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCAR 575
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + A M + EPN + Y +++
Sbjct: 576 NGLSGVAYEWFHRMKSENVEPNEITYEMLIEA 607
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
Query: 76 ARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTT 135
R A + ++R PD T V++ + VL + + G+
Sbjct: 428 GRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANR 487
Query: 136 ATLNTIVNGLCLENNVASAVTFTRHM-ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
T N ++ G C + + A R M E+AG +P+ ++ II+G I D+ A+
Sbjct: 488 ITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFN 547
Query: 195 NMVERHCEPNAVVYNAIM 212
M R P + Y +M
Sbjct: 548 EMRTRGIAPTKISYTTLM 565
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 45/92 (48%)
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+L ++K G+ P + ++ C NNV A F + P+ +T+ +IN +C
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ + + A +M R +P+ V Y+ +++
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678