Miyakogusa Predicted Gene
- Lj5g3v1415420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1415420.1 tr|B9MZG3|B9MZG3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595453 PE=4
SV=1,27.96,4e-19,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR_2,Pentatricopepti,CUFF.55228.1
(214 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 258 3e-69
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 189 2e-48
Medtr0652s0020.1 | PPR superfamily protein | LC | scaffold0652:7... 140 9e-34
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 139 2e-33
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 139 2e-33
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 137 7e-33
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 137 7e-33
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 137 8e-33
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 137 8e-33
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 137 1e-32
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 136 1e-32
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 135 2e-32
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 135 2e-32
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 135 2e-32
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 134 5e-32
Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 134 5e-32
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 132 2e-31
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 132 2e-31
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 130 7e-31
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 130 8e-31
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 130 1e-30
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 130 1e-30
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 129 2e-30
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 129 2e-30
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 128 3e-30
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 128 5e-30
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 127 7e-30
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 127 8e-30
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 126 2e-29
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 126 2e-29
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 126 2e-29
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 126 2e-29
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 124 7e-29
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 123 2e-28
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 121 5e-28
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 1e-27
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 120 1e-27
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 119 2e-27
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 119 2e-27
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 119 2e-27
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 118 4e-27
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 118 5e-27
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 7e-27
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 117 8e-27
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 117 1e-26
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 116 2e-26
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 115 4e-26
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 5e-26
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 7e-26
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 1e-25
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 112 2e-25
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 112 3e-25
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 111 5e-25
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 109 2e-24
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 107 8e-24
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 1e-23
Medtr0086s0070.1 | pentatricopeptide (PPR) repeat protein | HC |... 106 2e-23
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 105 4e-23
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 5e-21
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 98 7e-21
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 7e-21
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 98 7e-21
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 97 8e-21
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 1e-20
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 2e-20
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 96 3e-20
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 95 5e-20
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr1g034440.1 | PPR superfamily protein | LC | chr1:12539755-1... 94 1e-19
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 94 1e-19
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 1e-19
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 93 2e-19
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 92 3e-19
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 4e-19
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 5e-19
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 5e-19
Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 9e-19
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 89 3e-18
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 88 6e-18
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 87 8e-18
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 87 8e-18
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 8e-18
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 1e-17
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 87 2e-17
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 86 2e-17
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 4e-17
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 6e-17
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 7e-17
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 84 1e-16
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 84 1e-16
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 84 1e-16
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 1e-16
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 83 2e-16
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 83 2e-16
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 82 3e-16
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 82 3e-16
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 82 3e-16
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 82 4e-16
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 82 5e-16
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 82 5e-16
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 82 5e-16
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 82 5e-16
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 81 7e-16
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 1e-15
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 80 1e-15
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 1e-15
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 1e-15
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 80 2e-15
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 80 2e-15
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 79 4e-15
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 4e-15
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 7e-15
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 77 9e-15
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 77 9e-15
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 77 1e-14
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 76 2e-14
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 76 2e-14
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 76 2e-14
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 3e-14
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 3e-14
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 76 3e-14
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 3e-14
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 3e-14
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 4e-14
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 5e-14
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 7e-14
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 74 9e-14
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 74 1e-13
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 74 1e-13
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 74 1e-13
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 74 1e-13
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 74 1e-13
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 74 1e-13
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 2e-13
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 73 2e-13
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 73 2e-13
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 73 2e-13
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 72 3e-13
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 72 3e-13
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 72 3e-13
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 72 4e-13
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 72 4e-13
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 72 4e-13
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 72 4e-13
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 72 4e-13
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 72 4e-13
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 72 4e-13
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 71 7e-13
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 7e-13
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 71 8e-13
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 71 9e-13
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 71 9e-13
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 71 9e-13
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 71 9e-13
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 1e-12
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 70 1e-12
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 70 2e-12
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 69 2e-12
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 68 5e-12
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 68 5e-12
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 68 6e-12
Medtr3g104020.1 | PPR superfamily protein | LC | chr3:47925706-4... 68 7e-12
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 7e-12
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 68 7e-12
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 68 7e-12
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 9e-12
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 1e-11
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 67 1e-11
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 1e-11
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 67 1e-11
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 67 1e-11
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 67 2e-11
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 67 2e-11
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 66 2e-11
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 66 2e-11
Medtr5g008255.1 | ATP-binding; nucleic acid-binding; helicase, p... 66 3e-11
Medtr1g064380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 3e-11
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 65 4e-11
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 65 4e-11
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 65 4e-11
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 65 4e-11
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 65 5e-11
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 65 5e-11
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 65 5e-11
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 6e-11
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 65 6e-11
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 65 6e-11
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 65 6e-11
Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 7e-11
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 64 7e-11
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 64 7e-11
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 64 7e-11
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 64 7e-11
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 64 7e-11
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 64 1e-10
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 64 1e-10
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 64 1e-10
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 64 1e-10
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 64 1e-10
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 64 1e-10
Medtr1g054655.1 | PPR superfamily protein | LC | chr1:23786289-2... 64 1e-10
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 64 1e-10
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 63 2e-10
Medtr4g104790.1 | PPR containing plant protein | LC | chr4:43421... 63 2e-10
Medtr3g086470.1 | proton gradient regulation protein, putative |... 63 3e-10
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 62 4e-10
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 62 4e-10
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 62 6e-10
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 61 9e-10
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 61 9e-10
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 61 9e-10
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 61 9e-10
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 61 9e-10
Medtr1g054690.1 | hypothetical protein | LC | chr1:23824181-2382... 61 1e-09
Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 60 1e-09
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 60 1e-09
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 60 1e-09
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 60 1e-09
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 60 1e-09
Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 2e-09
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 60 2e-09
Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |... 59 3e-09
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 59 3e-09
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 59 3e-09
Medtr1g064170.1 | PPR domain protein | LC | chr1:28237724-282396... 59 3e-09
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 59 4e-09
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 59 4e-09
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 59 5e-09
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 59 5e-09
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 59 5e-09
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 59 5e-09
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 58 5e-09
Medtr6g047970.1 | membrane-associated salt-inducible protein | L... 58 6e-09
Medtr1g034420.1 | PPR superfamily protein | LC | chr1:12536372-1... 58 6e-09
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 7e-09
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 58 7e-09
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 58 7e-09
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 8e-09
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 57 1e-08
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 57 1e-08
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 57 1e-08
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 3e-08
Medtr2g104640.1 | PPR containing plant-like protein | HC | chr2:... 56 3e-08
Medtr1g105580.1 | PPR domain protein | LC | chr1:47566832-475695... 55 4e-08
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 55 4e-08
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 55 4e-08
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 4e-08
Medtr3g030450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 5e-08
Medtr3g030490.1 | PPR superfamily protein, putative | LC | chr3:... 55 5e-08
Medtr8g098955.1 | PPR containing plant-like protein | HC | chr8:... 55 5e-08
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 55 5e-08
Medtr3g081310.1 | PPR containing plant protein | HC | chr3:36828... 55 6e-08
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 55 6e-08
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 55 6e-08
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 54 8e-08
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 54 8e-08
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 54 8e-08
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 54 8e-08
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 54 8e-08
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 54 8e-08
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 54 8e-08
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 54 8e-08
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 54 8e-08
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 9e-08
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 54 1e-07
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 54 1e-07
Medtr5g088490.2 | PPR containing plant-like protein | LC | chr5:... 54 1e-07
Medtr5g088490.1 | PPR containing plant-like protein | LC | chr5:... 54 1e-07
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 54 1e-07
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 54 1e-07
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 54 1e-07
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 54 1e-07
Medtr6g017035.1 | PPR containing plant-like protein | HC | chr6:... 54 1e-07
Medtr5g088510.1 | PPR containing plant-like protein | LC | chr5:... 53 2e-07
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 53 2e-07
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 53 2e-07
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:... 53 3e-07
Medtr1g039290.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 3e-07
Medtr2g103550.2 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr2g103550.1 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr1g033450.1 | PPR containing plant-like protein | HC | chr1:... 52 3e-07
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 52 4e-07
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 52 4e-07
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 52 4e-07
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 4e-07
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 52 4e-07
Medtr0086s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 5e-07
Medtr3g108060.1 | PPR containing plant-like protein | HC | chr3:... 52 5e-07
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 5e-07
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 52 5e-07
Medtr7g085430.1 | hypothetical protein | LC | chr7:33098332-3309... 52 6e-07
Medtr8g058400.1 | PPR containing plant-like protein | HC | chr8:... 51 7e-07
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 8e-07
Medtr2g022860.1 | membrane-associated salt-inducible protein | H... 51 8e-07
Medtr7g082160.1 | PPR containing plant-like protein | HC | chr7:... 51 8e-07
Medtr3g053000.1 | PPR containing plant-like protein | HC | chr3:... 51 9e-07
Medtr4g079260.1 | PPR containing plant-like protein | LC | chr4:... 49 4e-06
Medtr2g090885.3 | PPR containing plant-like protein | HC | chr2:... 49 4e-06
Medtr2g090885.2 | PPR containing plant-like protein | HC | chr2:... 49 4e-06
Medtr2g090885.4 | PPR containing plant-like protein | HC | chr2:... 49 4e-06
Medtr2g090885.1 | PPR containing plant-like protein | HC | chr2:... 49 4e-06
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 4e-06
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 6e-06
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 48 7e-06
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 48 8e-06
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 48 9e-06
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 258 bits (659), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/180 (67%), Positives = 139/180 (77%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
HLLN+IR+L ++ AV FFHQML P P +KDFN LFTF+ +TK+Y ISLIK AHS
Sbjct: 42 HLLNTIRTLTNVNTAVTFFHQMLTLKPLPNIKDFNLLFTFITKTKNYTTTISLIKHAHSF 101
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
+ D YTLNIVINCLCHL T F SVL +FKTGL+PT TLNTIVNGLC+E NVA A
Sbjct: 102 NINADTYTLNIVINCLCHLGHTKFAFSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARA 161
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
V TR MENAGY+PN YTFGA++NG CKIGD SAV C+R+MVER+ EPN VVYNAIMDG
Sbjct: 162 VCLTREMENAGYEPNGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDG 221
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + + +AV M+ N P V +N++ + + A+SL + G
Sbjct: 183 LVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKG 242
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V + T N +I +C + +L + + G+ P T +V+G C E + A
Sbjct: 243 VKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAK 302
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G +PN T+ ++I G+C + + + A+ R MV + C P+ V YN+++ G
Sbjct: 303 SVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHG 361
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + S+ A ++M+ P V+ F L + A S+I G
Sbjct: 253 LIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMG 312
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++ T N +I C + + V L+ P+ T N++++G C +V A+
Sbjct: 313 VEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAM 372
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M N G P+ T+ +++GFC++G +A M + P + ++DG
Sbjct: 373 CLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDG 431
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K +D A+ ++M+ +P V + +L + AA L G
Sbjct: 358 LIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMKQYG 417
Query: 96 VAPDIYTLNIVINCL--CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+ P + T +V++ L CH R A + + + ++ L N +++GLC + +
Sbjct: 418 MVPTLLTCAVVLDGLIKCHFRFEA--MLLFRALEESDLDLDIVIYNVMIDGLCKDGKLND 475
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A + G + +SYTF +I G C+ G + A + M E C+PN YN +
Sbjct: 476 ARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEENGCQPNKCSYNIFVQ 535
Query: 214 G 214
G
Sbjct: 536 G 536
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV +M A P F +L + + +A+ I+ P++ N +++
Sbjct: 161 AVCLTREMENAGYEPNGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMD 220
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + LS+ + + G++ + T N ++ G+C A M G P
Sbjct: 221 GFCKGGFVSEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMP 280
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ TF +++GFCK G A + MV+ EPN V YN+++ G
Sbjct: 281 DVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGG 326
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 74/172 (43%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+ +D A+ F M+ P V +NSL + K A+ L+ + G+ PD+ T
Sbjct: 330 MNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVT 389
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+++ C + + + + + G+ PT T +++GL + A+ R +E
Sbjct: 390 WTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALE 449
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + + +I+G CK G A + ++ + ++ +N ++ G
Sbjct: 450 ESDLDLDIVIYNVMIDGLCKDGKLNDARKVLARLLVKGLRFDSYTFNIMIGG 501
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS-GVAPDI 100
LK++D A+ FFH M NP P V DF L F+ + KHY AISL+K HSS G+ PD
Sbjct: 68 KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 127
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
+ LN+VIN LCHL+ AFG SVLG + K GL P+ T ++NGLC++ +V AV H
Sbjct: 128 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 187
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+E GY+ + T+G +ING CK+G T AV +R M ER+ PN VVY+ +MDG
Sbjct: 188 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDG 241
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + AV + +M N P V ++++ + + + A+ L G
Sbjct: 203 LINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKG 262
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T +I LC+ R S+L + K G+ P +LN +V+ LC E + A
Sbjct: 263 IKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAK 322
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G P+ +T+ ++I+ +C + A MV R C P+ V Y +++ G
Sbjct: 323 SVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHG 381
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 81 YAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNT 140
+ A SL+ GV PD+ +LNI+++ LC + SV+G + G P T N+
Sbjct: 283 WKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNS 342
Query: 141 IVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH 200
+++ CL+N + A M + G P+ + ++I+G+CKI + A+ + M++
Sbjct: 343 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 402
Query: 201 CEPNAVVYNAIMDG 214
P+ V + ++ G
Sbjct: 403 FTPDVVTWTTLIGG 416
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++NS+ LK + + ML P V F L + A+ L+ +G
Sbjct: 133 VINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTG 192
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ T ++IN LC + +T+ + L + + P +T+++GLC + V+ A+
Sbjct: 193 YRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEAL 252
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G +PN T+ +I G C G + A + M++ P+ N ++D
Sbjct: 253 GLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVD 310
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A+ +M+ P V + +L + AA L H G
Sbjct: 378 LIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYG 437
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ T I+++ LC + + LS+ + K+ L + I++G+C + +A+
Sbjct: 438 QVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTAL 497
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G Q N Y + +INGF K G + A + NM E C P++ YN + G
Sbjct: 498 ELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG 556
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A + +M+ P ++ N L + + A S+I G PD++T N +I+
Sbjct: 286 AGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLID 345
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + V L+ G P ++++G C N+ A+ M G+ P
Sbjct: 346 RYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTP 405
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ +I GFC++G +A NM + PN I+DG
Sbjct: 406 DVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDG 451
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V +NSL A + + S G PDI +I+ C ++
Sbjct: 328 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 387
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ +L + K G P T T++ G C +A +M G PN T
Sbjct: 388 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAI 447
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++G CK A+ M + + + N V+Y+ I+DG
Sbjct: 448 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDG 486
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A F M++ P + + SL + K+ A+ L+ G PD+ T
Sbjct: 353 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 412
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C + R + + K G P T I++GLC ++ A++ ME +
Sbjct: 413 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 472
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N + I++G C G +A+ + + + N Y +++G
Sbjct: 473 LDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMING 521
>Medtr0652s0020.1 | PPR superfamily protein | LC |
scaffold0652:7157-3598 | 20130731
Length = 364
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVART--KHYAAAISLIKRAHSSGVAPDIYTL 103
+D +V+ F+ ML+ NP P + +FN + + +T KHY ISL R G+ P+++T
Sbjct: 119 VDNSVSSFYDMLSINPSPSIVEFNKILGSIVKTDNKHYTTVISLSHRLEFHGITPNLFTF 178
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+INC CHL F S+L + K G +P T TLNT+V G+CL V A+ F H+
Sbjct: 179 NILINCYCHLGEMDFAFSMLSKILKMGFQPNTVTLNTLVKGMCLNGKVKEALHFHDHVIA 238
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ N T+G +ING CK+G T A+ +R + + V+YN I+D
Sbjct: 239 LGFHLNQITYGTLINGLCKMGKTTEALQVLRKIDGKLVNTGVVMYNTIID 288
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D V+ FH+ML NP P V +F + + + + KHY ISL + +G+ P+I +L+I
Sbjct: 26 VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 85
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC CHL + F S+ + K G P T TL T+V G CL + V A+ F H+ G
Sbjct: 86 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 145
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N ++G +ING CKIG+T +A+ +R + + N V+Y+ I+DG
Sbjct: 146 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDG 194
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M+ P V NSL + A L++ + PD+YT
Sbjct: 199 KLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTF 258
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ LC + S + ++ K G+ P T +++++G CL N V A +
Sbjct: 259 NILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVLSIISR 318
Query: 164 AGYQPNSYTFGAIINGF 180
PN+ ++ +INGF
Sbjct: 319 MRVAPNARSYSIVINGF 335
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 4/181 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + AA+ Q+ V ++++ + + K A L +
Sbjct: 156 LINGLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDGLCKDKLVNDAYELYSEMITKR 215
Query: 96 VAPDIYTLNIVIN--CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
++P + TLN +I C+ + AFGL + +V K + P T N +V+ LC E +
Sbjct: 216 ISPTVVTLNSLIYGYCIVGQFKEAFGL-LREMVLKN-INPDVYTFNILVDALCKEGKIKE 273
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A + M G P+ T+ ++++G+C + + A + + PNA Y+ +++
Sbjct: 274 AKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVLSIISRMRVAPNARSYSIVIN 333
Query: 214 G 214
G
Sbjct: 334 G 334
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHSSGVAPDIYTLN 104
+D V+ F++ML NP P + +FN + T + +TK HY IS ++ +G+ P I TL
Sbjct: 38 IDNVVSSFNRMLRMNPTPSIVEFNKILTSLVKTKTHYNTVISFFRKMQFNGIVPSIVTLG 97
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
IVINC CHLR F S+ G + K G +P T TLNT+V G CL V A+ F +
Sbjct: 98 IVINCYCHLREINFAFSLFGKILKMGYQPDTITLNTLVKGFCLNGKVKEALHFHDRVLAL 157
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+Q N T+ +ING CK+G+T +A+ +R + + + V+Y+ I+D
Sbjct: 158 GFQLNQVTYATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIID 206
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
+++S+ K + A + +M+A P V FNSL F V R K A L +
Sbjct: 204 IIDSLCKDKLVIDAYELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKE---AFGLFHQMV 260
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ P+ YT NI+++ LC + L ++ K ++P T N++++G CL N V
Sbjct: 261 LKNINPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYCLVNEVN 320
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A + G P++ ++ +INGFCKI A+ M + PN V YN+++
Sbjct: 321 KAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLI 380
Query: 213 DG 214
DG
Sbjct: 381 DG 382
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K ++ A++ F++M P +NSL + ++ + A L+ H +G
Sbjct: 344 MINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNG 403
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI+T + +I+ LC ++++ + G++P T N +++GLC + +A
Sbjct: 404 QPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQ 463
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY N T+ +ING CK G + A + M + PN V Y I+
Sbjct: 464 DVFQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETII 520
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 56 MLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
M+ + P V +NSL + V +S I R GVAPD + NI+IN C
Sbjct: 294 MIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARM---GVAPDAQSYNIMINGFCK 350
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
++ LS+ + + P T T N++++GLC ++ A M G P+ +T
Sbjct: 351 IKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFT 410
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++I+ CK + A+ ++ + ++ +PN YN ++DG
Sbjct: 411 YSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDG 452
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N + + K A+SL ++P+ T N +I+ LC R + +
Sbjct: 336 PDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKL 395
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G P T +++++ LC N++ A+ + +++ G QPN YT+ +I+G CK
Sbjct: 396 VDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCK 455
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G ++A ++++ + N YN +++G
Sbjct: 456 GGRLKNAQDVFQDLLTKGYSLNIRTYNILING 487
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + ++SL + + H AI+L+K+ G+ P++YT NI+I+ LC R V
Sbjct: 406 PDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDV 465
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G T N ++NGLC E A ME+ PN T+ II
Sbjct: 466 FQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETIIRSLFY 525
Query: 183 IGDTESAVLCMRNMVER 199
E A +R MV R
Sbjct: 526 KDYNEKAEKLLREMVAR 542
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A FHQM+ N P FN L + + + A + + + PD+ T N
Sbjct: 249 LKEAFGLFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNS 308
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + VL + + G+ P + N ++NG C V A++ M
Sbjct: 309 LMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQR 368
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ T+ ++I+G CK G A + M P+ Y++++D
Sbjct: 369 ISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDA 417
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D V+ FH+ML NP P + +F+ + + + KHY ISL + +G+ P+I +L+I
Sbjct: 42 VDDFVSSFHRMLGLNPTPSIVEFSKILGSLVKLKHYPTVISLSYQLEFNGIKPNIVSLSI 101
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC CHL + + S+L +FK G P T T NT++ GLCL V A+ F H+ G
Sbjct: 102 LINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEAIHFHDHVLALG 161
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + T+G +ING CK+G T+ A+ +R + + N V+YN ++D
Sbjct: 162 FHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVID 209
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+ P V F++L A L+ +
Sbjct: 207 VIDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKN 266
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+++ LC S L ++ K G+ P T N+I++G CL N V A
Sbjct: 267 INPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAK 326
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G P++Y++ +INGFCKI + A+ M R PN V Y++++DG
Sbjct: 327 HLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDG 385
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A++ F++M P ++SL + ++ ++ A L+ H +G
Sbjct: 347 MINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNG 406
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I+T + +I+ LC ++++ + G++P T N +++GLC + +A
Sbjct: 407 QPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQ 466
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY N ++ +ING CK G + A + M P+AV Y I+
Sbjct: 467 DVFQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAVTYETII 523
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNS------LFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
A +F M+ P V +NS L V + KH + IS I GVAP Y
Sbjct: 289 GAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRI------GVAPSAY 342
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
+ +I+IN C ++ LS+ + G+ P T T +++++GLC + A M
Sbjct: 343 SYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEM 402
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN +T+ ++I+ CK + A+ ++ + ++ +P+ YN ++DG
Sbjct: 403 HVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDG 455
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A HQM+ N P V FN L + + A S + GV PD+ T N
Sbjct: 252 LKEAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNS 311
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + +L ++ + G+ P+ + + ++NG C + A++ M G
Sbjct: 312 IMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRG 371
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN+ T+ ++I+G CK G A + M PN Y++++D
Sbjct: 372 IAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTYSSLID 419
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 76/152 (50%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P ++ + + K A+SL G+AP+ T + +I+ LC R + +
Sbjct: 339 PSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWEL 398
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G P T +++++ LC N++ A+T + +++ G QP+ YT+ +I+G CK
Sbjct: 399 VDEMHVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCK 458
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G ++A ++++ + N YN +++G
Sbjct: 459 GGRLKNAQDVFQDLLTKGYSLNIRSYNILING 490
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + A+ +++R + V ++ N VI+ LC + + + +
Sbjct: 169 YGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELYSEMI 228
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ PT T + ++ G C+ + A M P+ YTF +++ CK GD +
Sbjct: 229 TKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVK 288
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M++ P+ V YN+IMDG
Sbjct: 289 GAKSFLVVMMKEGVIPDVVTYNSIMDG 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + ++SL + + H A++L+K+ G+ PD+YT NI+I+ LC R V
Sbjct: 409 PNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDV 468
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G + N ++NGLC + A M+ P++ T+ II+
Sbjct: 469 FQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAVTYETIIHSLFY 528
Query: 183 IGDTESAVLCMRNMVER 199
+ E A +R M+ R
Sbjct: 529 KDENEKAEKLLREMLGR 545
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 71/178 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L + A + ++ P FN+L + AI + G
Sbjct: 102 LINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEAIHFHDHVLALG 161
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D T +IN LC + +T L VL + + NT+++ LC + V+ A
Sbjct: 162 FHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAY 221
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M P TF A+I GFC +G + A + MV ++ P+ +N ++D
Sbjct: 222 ELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVD 279
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 99/169 (58%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D V+ FH+ML NP P V +F + + + + KHY ISL + +G+ P+I +L+I
Sbjct: 43 VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 102
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC CHL + F S+ + K G P T TL T+V G CL + V A+ F H+ G
Sbjct: 103 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 162
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N ++G +ING CKIG+T +A+ +R + + + V+Y+ I+DG
Sbjct: 163 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDG 211
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M+ P V NSL + A L++ + PD+YT
Sbjct: 216 KLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTF 275
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ LC + S + ++ K G+ P T +++++G CL M
Sbjct: 276 NILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCL--------YIISRMRV 327
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A PN+ ++ +INGFCKI + A+ M R P+ V YN+++DG
Sbjct: 328 A---PNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDG 375
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A++ F++M P +NSL + ++ + A L+ SG
Sbjct: 337 VINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSG 396
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
DI T N +I+ LC ++++ + G++ T N +++GLC + + A
Sbjct: 397 QPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQ 456
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY +T+ +ING C G A + M + C P+AV I+
Sbjct: 457 VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETII 513
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + + H AI+L+K+ G+ D+YT NI+I+ LC R + +
Sbjct: 404 YNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLL 463
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T T ++NGLCLE + A T ME+ G P++ T II + E
Sbjct: 464 IKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNE 523
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 524 RAEKLLREMIAR 535
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + AA+ ++++ V+ D+ + +I+ LC + + +
Sbjct: 170 YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMI 229
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ PT TLN+++ G C+ A R M P+ YTF +++ CK G +
Sbjct: 230 TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIK 289
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M++ P+ V Y+++MDG
Sbjct: 290 EAKSGIAVMMKEGVMPDVVTYSSLMDG 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 73/152 (48%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + ++ + + K A+SL +APD T N +I+ LC R ++ +
Sbjct: 329 PNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWEL 388
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + +G T N++++ LC ++V A+ + +++ G Q + YT+ +I+G CK
Sbjct: 389 VDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCK 448
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + A + ++++ + Y +++G
Sbjct: 449 QGRLKDAQVIFQDLLIKGYNLTVWTYTIMING 480
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 24/190 (12%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN---- 104
A +M+ N P V FN L + + A S I GV PD+ T +
Sbjct: 256 AFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMD 315
Query: 105 --------------------IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNG 144
IVIN C ++ LS+ + + P T T N++++G
Sbjct: 316 GYCLYIISRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDG 375
Query: 145 LCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
LC ++ A M ++G + T+ ++I+ CK + A+ ++ + ++ + +
Sbjct: 376 LCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLD 435
Query: 205 AVVYNAIMDG 214
YN ++DG
Sbjct: 436 MYTYNILIDG 445
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 97/174 (55%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
+ S +D AV F+ ++ P P V FN++ V + KH AISL+K+ GV P
Sbjct: 32 LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 91
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
I+TL+I INC CHL F SVLG+V K G +P TL T++ GLC+ V A+ F
Sbjct: 92 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 151
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ G + +G +ING CKIG + A ++ M + +PN V+YN I+D
Sbjct: 152 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 205
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K +D AV+ F++M N + ++SL + ++ + A L ++ G P++ T
Sbjct: 351 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 410
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+I+ C ++ G+ + L+ GL PT T N ++NG C + A+ M++
Sbjct: 411 NILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS 470
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+S T+ ++ +G CK G A + M + YN ++D
Sbjct: 471 KNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLD 520
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + + SL RT + L+ + + P++YT N++I+ C + +
Sbjct: 230 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGM 289
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L+ K G +P T NT+++G CL NV A + G P+ +++ +I G+CK
Sbjct: 290 FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCK 349
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ AV M ++ + V+Y++++DG
Sbjct: 350 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 381
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F + P V + L + K A+SL + DI + +I+
Sbjct: 321 ARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLID 380
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R ++ + + G P T N +++ C ++ + + M G P
Sbjct: 381 GLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTP 440
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +ING+CK A+ + M ++ P+++ YN++ DG
Sbjct: 441 TVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 486
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R K ++A F+ M+ P + FN+L + + A L G+ PD+
Sbjct: 279 RKGKMIEAQ-GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 337
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
++ I+I C +R +S+ + + +++++GLC ++ A
Sbjct: 338 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 397
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N G PN T+ +I+ FCKI D + + + M + P + YN +++G
Sbjct: 398 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 451
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 59/147 (40%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + A L++ V P+I N++I+ C T + +
Sbjct: 165 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 224
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T +++ G C M N PN YTF +I+ FC+ G
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A MV+R +P+ V +N ++ G
Sbjct: 285 EAQGMFNLMVKRGQQPDIVTFNTLISG 311
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F + P P V +N L + + I L K G+ P + T NI+IN
Sbjct: 391 AWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 450
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C +R +++L ++ L P + T N++ +GLC ++ A + M G
Sbjct: 451 GYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPV 510
Query: 169 NSYTFGAIINGFCKIGDT 186
+ T+ +++ FCK D
Sbjct: 511 DVATYNVLLDAFCKAQDV 528
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ G+ D +IN LC + R+ +L + ++P N I++ C +
Sbjct: 155 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 214
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A + + G P+ T+ ++I GFC+ G M MV ++ PN +N ++
Sbjct: 215 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 274
Query: 213 D 213
D
Sbjct: 275 D 275
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 97/174 (55%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
+ S +D AV F+ ++ P P V FN++ V + KH AISL+K+ GV P
Sbjct: 32 LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 91
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
I+TL+I INC CHL F SVLG+V K G +P TL T++ GLC+ V A+ F
Sbjct: 92 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 151
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ G + +G +ING CKIG + A ++ M + +PN V+YN I+D
Sbjct: 152 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 205
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K +D AV+ F++M N + ++SL + ++ + A L ++ G P++ T
Sbjct: 351 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 410
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+I+ C ++ G+ + L+ GL PT T N ++NG C + A+ M++
Sbjct: 411 NILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS 470
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+S T+ ++ +G CK G A + M + YN ++D
Sbjct: 471 KNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLD 520
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + + SL RT + L+ + + P++YT N++I+ C + +
Sbjct: 230 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGM 289
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L+ K G +P T NT+++G CL NV A + G P+ +++ +I G+CK
Sbjct: 290 FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCK 349
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ AV M ++ + V+Y++++DG
Sbjct: 350 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 381
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F + P V + L + K A+SL + DI + +I+
Sbjct: 321 ARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLID 380
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R ++ + + G P T N +++ C ++ + + M G P
Sbjct: 381 GLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTP 440
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +ING+CK A+ + M ++ P+++ YN++ DG
Sbjct: 441 TVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 486
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R K ++A F+ M+ P + FN+L + + A L G+ PD+
Sbjct: 279 RKGKMIEAQ-GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 337
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
++ I+I C +R +S+ + + +++++GLC ++ A
Sbjct: 338 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 397
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N G PN T+ +I+ FCKI D + + + M + P + YN +++G
Sbjct: 398 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 451
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 59/147 (40%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + A L++ V P+I N++I+ C T + +
Sbjct: 165 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 224
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T +++ G C M N PN YTF +I+ FC+ G
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A MV+R +P+ V +N ++ G
Sbjct: 285 EAQGMFNLMVKRGQQPDIVTFNTLISG 311
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F + P P V +N L + + I L K G+ P + T NI+IN
Sbjct: 391 AWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 450
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C +R +++L ++ L P + T N++ +GLC ++ A + M G
Sbjct: 451 GYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPV 510
Query: 169 NSYTFGAIINGFCKIGDT 186
+ T+ +++ FCK D
Sbjct: 511 DVATYNVLLDAFCKAQDV 528
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ G+ D +IN LC + R+ +L + ++P N I++ C +
Sbjct: 155 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 214
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A + + G P+ T+ ++I GFC+ G M MV ++ PN +N ++
Sbjct: 215 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 274
Query: 213 D 213
D
Sbjct: 275 D 275
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
T+D A++ F+ ML NP P + FN + T + + Y ISL K+ + PDI+TLN
Sbjct: 40 TVDNAISSFNHMLHMNPTPSIIQFNKILTSLVKLNQYPTVISLSKKLE---IRPDIFTLN 96
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+INC CH+++ F S+ + K G TL T++ GLCL V ++ F H+
Sbjct: 97 ILINCYCHVQQMPFAFSIFAKILKMGFESDAITLTTLMKGLCLNGKVKESLHFHDHVLAL 156
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+Q + T+G +ING CKIG+T++A+L +R + R E + V++N I+D
Sbjct: 157 GFQLDHVTYGTLINGLCKIGETKAALLMLRKIEGRLVESDVVMHNTIID 205
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
+ S+ +K +D A++ F++M + P +NSL + + + A + H++G+
Sbjct: 337 IQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGI 396
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
+I+T N +I+ LC + ++ + G++ T + +++GLC + + A
Sbjct: 397 PANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQV 456
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ + GY N T+ +ING C G + A + M + C P+AV Y I
Sbjct: 457 IFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPDAVTYEPI 511
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 7/179 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+ P + FNSL A L +
Sbjct: 203 IIDSLCKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKN 262
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDIYT NI+++ LC + +V+ ++ K G+ P T N++++G CL V A
Sbjct: 263 INPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAK 322
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G P+ I CKI + A+ M + P+ V YN+++DG
Sbjct: 323 HVLNIISRMGAAPD-------IQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDG 374
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 70/140 (50%)
Query: 75 VARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPT 134
+ + K A+SL S G+ PD T N +I+ LC RR + + G+
Sbjct: 340 LCKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPAN 399
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
T N++++ LC ++V A+ + +++ G Q + YT+ +I+G CK G + A + +
Sbjct: 400 IFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQ 459
Query: 195 NMVERHCEPNAVVYNAIMDG 214
+++ + N Y+ +++G
Sbjct: 460 DLLIKGYNLNVCTYSIMING 479
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 28/197 (14%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT--- 102
L A F+QML N P + FN L + + A ++I GV PD+ T
Sbjct: 248 LKEAFGLFYQMLLKNINPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNS 307
Query: 103 -----------------LNIV--------INCLCHLRRTAFGLSVLGLVFKTGLRPTTAT 137
LNI+ I LC ++ LS+ + G+ P T
Sbjct: 308 LMDGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKGITPDKVT 367
Query: 138 LNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMV 197
N++++GLC + A F M G N +T+ ++I+ CK + A++ ++ +
Sbjct: 368 YNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIK 427
Query: 198 ERHCEPNAVVYNAIMDG 214
++ + + Y+ ++DG
Sbjct: 428 DQGIQSDMYTYSILIDG 444
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPC-VKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L++ + + + A F +M AN P + +NSL + + H AI L+K+
Sbjct: 371 LIDGLCKARRIPCAWEFVDEM-HANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQ 429
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ D+YT +I+I+ LC R + + G T + ++NGLC + A
Sbjct: 430 GIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEA 489
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
T ME+ G P++ T+ I K + + A +R M+ R
Sbjct: 490 TTLLSKMEDNGCIPDAVTYEPINRALFKNDENDKAEQLLREMIAR 534
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 50/119 (42%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G D T +IN LC + T L +L + + NTI++ LC V A
Sbjct: 157 GFQLDHVTYGTLINGLCKIGETKAALLMLRKIEGRLVESDVVMHNTIIDSLCKHKFVTDA 216
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M PN TF ++I GFC +G + A M+ ++ P+ +N ++D
Sbjct: 217 YELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTFNILVD 275
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTLNIV 106
AV+ FH M+ NP P + +FN + + ++ HY AISL + +G+ PDI TL+I+
Sbjct: 114 AVSSFHHMIRMNPTPSIIEFNKILGSLVKSNNNHYTTAISLFHQLEFNGIIPDIVTLSIL 173
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
INC CHL + F S+ G + K G +P T TLNT+V G+CL V A+ F H+ G+
Sbjct: 174 INCYCHLGQMNFAFSIFGNILKMGFQPNTVTLNTLVKGMCLNGKVKEALHFHDHVIALGF 233
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N T+G +ING CK+G T A+ +R + + + V+Y+ I+D
Sbjct: 234 PLNQVTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIID 280
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 69/179 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L ++ A + F +L P N+L + A+ + G
Sbjct: 173 LINCYCHLGQMNFAFSIFGNILKMGFQPNTVTLNTLVKGMCLNGKVKEALHFHDHVIALG 232
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ T +IN LC + +T L VL + + +TI++ LC E V A
Sbjct: 233 FPLNQVTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKEIFVTEAY 292
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + P T ++I GFC +G + A M+ + PN +N ++D
Sbjct: 293 ELYSQMIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPNVYTFNILVDA 351
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTL 103
+D AV+ F+ M NP P + FN + + ++ HY AISL + G+ PDI T
Sbjct: 42 VDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTF 101
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+INC CHLR F S+L + K G +P T T NT++ GLC+ V A+ F H+ +
Sbjct: 102 NILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVIS 161
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ + ++G +ING CKIG+T +A+ +R + + N V+Y+ I+D
Sbjct: 162 LGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K +D A++ F++M P ++SL + ++ Y+ A L+ H G
Sbjct: 349 MINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHG 408
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I+T N +I+ LC + ++++ + G++P T N +++GLC + +A
Sbjct: 409 HPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNAR 468
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY + T+ +ING CK+G + A + + M + P+AV Y I+
Sbjct: 469 DVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETII 525
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+ P V FNSL + A L
Sbjct: 209 IIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKN 268
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+++ LC + SV+ ++ K + P T N++++G CL N V A
Sbjct: 269 INPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAK 328
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P+++++ +ING CK+ + A+ M R PN V Y++++DG
Sbjct: 329 HVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDG 387
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 56 MLAANPFPCVKDFNSLFT------FVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINC 109
M+ P V +NSL V + KH IS I+ VAPD ++ +I+IN
Sbjct: 299 MMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIR------VAPDAHSYSIMING 352
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
LC ++ LS+ + G+ P T T +++++GLC + A M + G+ PN
Sbjct: 353 LCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPN 412
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+T+ ++I+ CK + A+ ++ + ++ +P+ YN ++DG
Sbjct: 413 IFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDG 457
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A FH+++ N P V FN + + + A S+I V PD+ T N +++
Sbjct: 257 AFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMD 316
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + VL ++ K + P + + ++NGLC V A++ M G P
Sbjct: 317 GYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAP 376
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ ++I+G CK G A + M + PN YN+++D
Sbjct: 377 NTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDA 422
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +NSL + + AI+L+K+ G+ PD+ T NI+I+ LC R V
Sbjct: 411 PNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDV 470
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G T N ++NGLC A ME+ G P++ T+ II F
Sbjct: 471 FQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFH 530
Query: 183 IGDTESAVLCMRNMVER 199
+ E A +R M+ R
Sbjct: 531 KDENEKAEKLLREMIAR 547
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P ++ + + + K A+SL G+AP+ T + +I+ LC R ++ +
Sbjct: 341 PDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDL 400
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G P T N++++ LC + + A+ + +++ G QP+ T+ +I+G CK
Sbjct: 401 VDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK 460
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +A ++++ + + YN +++G
Sbjct: 461 GGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ FHQ+ P + FN L + + S++ + G PD T N +I
Sbjct: 82 AISLFHQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIK 141
Query: 109 CLC--------------------HLRRTAFGLSVLGLVFKTG--------LRPTTATL-- 138
LC HL + ++G + GL K G LR L
Sbjct: 142 GLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLC-KIGETRAALQMLRKIEGKLVN 200
Query: 139 ------NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
+TI++ LC + V A M PN TF ++I GFC +G + A
Sbjct: 201 TNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRL 260
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+V ++ P+ +N ++D
Sbjct: 261 FHEIVLKNINPDVYTFNIMVDA 282
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTL 103
+D AV+ F+ M NP P + FN + + ++ HY AISL + G+ PDI T
Sbjct: 42 VDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTF 101
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+INC CHLR F S+L + K G +P T T NT++ GLC+ V A+ F H+ +
Sbjct: 102 NILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVIS 161
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ + ++G +ING CKIG+T +A+ +R + + N V+Y+ I+D
Sbjct: 162 LGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K +D A++ F++M P ++SL + ++ Y+ A L+ H G
Sbjct: 349 MINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHG 408
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I+T N +I+ LC + ++++ + G++P T N +++GLC + +A
Sbjct: 409 HPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNAR 468
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY + T+ +ING CK+G + A + + M + P+AV Y I+
Sbjct: 469 DVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETII 525
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+ P V FNSL + A L
Sbjct: 209 IIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKN 268
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+++ LC + SV+ ++ K + P T N++++G CL N V A
Sbjct: 269 INPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAK 328
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P+++++ +ING CK+ + A+ M R PN V Y++++DG
Sbjct: 329 HVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDG 387
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 56 MLAANPFPCVKDFNSLFT------FVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINC 109
M+ P V +NSL V + KH IS I+ VAPD ++ +I+IN
Sbjct: 299 MMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIR------VAPDAHSYSIMING 352
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
LC ++ LS+ + G+ P T T +++++GLC + A M + G+ PN
Sbjct: 353 LCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPN 412
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+T+ ++I+ CK + A+ ++ + ++ +P+ YN ++DG
Sbjct: 413 IFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDG 457
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A FH+++ N P V FN + + + A S+I V PD+ T N +++
Sbjct: 257 AFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMD 316
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + VL ++ K + P + + ++NGLC V A++ M G P
Sbjct: 317 GYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAP 376
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ ++I+G CK G A + M + PN YN+++D
Sbjct: 377 NTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDA 422
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +NSL + + AI+L+K+ G+ PD+ T NI+I+ LC R V
Sbjct: 411 PNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDV 470
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G T N ++NGLC A ME+ G P++ T+ II F
Sbjct: 471 FQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFH 530
Query: 183 IGDTESAVLCMRNMVER 199
+ E A +R M+ R
Sbjct: 531 KDENEKAEKLLREMIAR 547
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P ++ + + + K A+SL G+AP+ T + +I+ LC R ++ +
Sbjct: 341 PDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDL 400
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G P T N++++ LC + + A+ + +++ G QP+ T+ +I+G CK
Sbjct: 401 VDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK 460
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +A ++++ + + YN +++G
Sbjct: 461 GGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ FHQ+ P + FN L + + S++ + G PD T N +I
Sbjct: 82 AISLFHQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIK 141
Query: 109 CLC--------------------HLRRTAFGLSVLGLVFKTG--------LRPTTATL-- 138
LC HL + ++G + GL K G LR L
Sbjct: 142 GLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLC-KIGETRAALQMLRKIEGKLVN 200
Query: 139 ------NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
+TI++ LC + V A M PN TF ++I GFC +G + A
Sbjct: 201 TNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRL 260
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+V ++ P+ +N ++D
Sbjct: 261 FHEIVLKNINPDVYTFNIMVDA 282
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTL 103
+D AV+ F+ M NP P + FN + + ++ HY AISL + G+ PDI T
Sbjct: 42 VDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTF 101
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+INC CHLR F S+L + K G +P T T NT++ GLC+ V A+ F H+ +
Sbjct: 102 NILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVIS 161
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ + ++G +ING CKIG+T +A+ +R + + N V+Y+ I+D
Sbjct: 162 LGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K +D A++ F++M P ++SL + ++ Y+ A L+ H G
Sbjct: 349 MINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHG 408
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I+T N +I+ LC + ++++ + G++P T N +++GLC + +A
Sbjct: 409 HPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNAR 468
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY + T+ +ING CK+G + A + + M + P+AV Y I+
Sbjct: 469 DVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETII 525
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+ P V FNSL + A L
Sbjct: 209 IIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKN 268
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+++ LC + SV+ ++ K + P T N++++G CL N V A
Sbjct: 269 INPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAK 328
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P+++++ +ING CK+ + A+ M R PN V Y++++DG
Sbjct: 329 HVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDG 387
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 56 MLAANPFPCVKDFNSLFT------FVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINC 109
M+ P V +NSL V + KH IS I+ VAPD ++ +I+IN
Sbjct: 299 MMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIR------VAPDAHSYSIMING 352
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
LC ++ LS+ + G+ P T T +++++GLC + A M + G+ PN
Sbjct: 353 LCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPN 412
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+T+ ++I+ CK + A+ ++ + ++ +P+ YN ++DG
Sbjct: 413 IFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDG 457
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A FH+++ N P V FN + + + A S+I V PD+ T N +++
Sbjct: 257 AFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMD 316
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + VL ++ K + P + + ++NGLC V A++ M G P
Sbjct: 317 GYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAP 376
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N+ T+ ++I+G CK G A + M + PN YN+++D
Sbjct: 377 NTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDA 422
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +NSL + + AI+L+K+ G+ PD+ T NI+I+ LC R V
Sbjct: 411 PNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDV 470
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G T N ++NGLC A ME+ G P++ T+ II F
Sbjct: 471 FQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFH 530
Query: 183 IGDTESAVLCMRNMVER 199
+ E A +R M+ R
Sbjct: 531 KDENEKAEKLLREMIAR 547
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P ++ + + + K A+SL G+AP+ T + +I+ LC R ++ +
Sbjct: 341 PDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDL 400
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G P T N++++ LC + + A+ + +++ G QP+ T+ +I+G CK
Sbjct: 401 VDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCK 460
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +A ++++ + + YN +++G
Sbjct: 461 GGRLHNARDVFQDLLIKGYSLDVQTYNIMING 492
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ FHQ+ P + FN L + + S++ + G PD T N +I
Sbjct: 82 AISLFHQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIK 141
Query: 109 CLC--------------------HLRRTAFGLSVLGLVFKTG--------LRPTTATL-- 138
LC HL + ++G + GL K G LR L
Sbjct: 142 GLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLC-KIGETRAALQMLRKIEGKLVN 200
Query: 139 ------NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
+TI++ LC + V A M PN TF ++I GFC +G + A
Sbjct: 201 TNVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRL 260
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+V ++ P+ +N ++D
Sbjct: 261 FHEIVLKNINPDVYTFNIMVDA 282
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVART--KHYAAAISLIKRAHSSGVAPDIYTL 103
+D V+ F+ +L NP P + +FN + + ++ KHY AISL + +G+ P I T
Sbjct: 33 VDNVVSSFNHILHMNPTPSIIEFNKILGSLVKSNNKHYPTAISLFYQLELNGITPSIVTF 92
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NIVINC CHL F S+LG + K G P TL T++ G+CL V A+ F H+ +
Sbjct: 93 NIVINCYCHLSEMNFAFSLLGKILKVGFHPDIVTLTTLIKGMCLNGKVKEALHFHDHVIS 152
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ + ++G +ING CKIG+T +A+ +R + + + V+YN I+D
Sbjct: 153 LGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIID 202
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+ P V F+SL + A L
Sbjct: 200 IIDSLCKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKN 259
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++YT NI+++ LC + +VL ++ K G++P T ++++G CL N V A
Sbjct: 260 INPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNKAK 319
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G PN + + +ING CK + A+ + M + PN V Y++++DG
Sbjct: 320 ALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDG 378
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+SL + + +H AI L+K+ + P++YT NI+I+ LC R + +F
Sbjct: 407 FSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLF 466
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T T N ++NGLCLE + A+ ME+ G PN+ TF I++ K + E
Sbjct: 467 IKGYNLTVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEIIVHALFKNDENE 526
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 527 KAEKLLREMIAR 538
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D A+ FF +M + P ++SL + ++ + A L+ H G
Sbjct: 340 VINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRG 399
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ T + +++ LC R + ++ + ++P T N +++GLC + + A
Sbjct: 400 QPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQ 459
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY +T+ +ING C G + A+ + M + C PNAV + I+
Sbjct: 460 VIFQDLFIKGYNLTVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEIIV 516
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F++M+ N P V FN L + + A +++ GV PDI T +++
Sbjct: 248 AFRLFNEMVLKNINPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMD 307
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + ++ + + G+ P + ++NGLC + A+ F + M++ P
Sbjct: 308 GYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIP 367
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N+ T+ ++I+G CK G A + M +R N + +++++
Sbjct: 368 NTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLL 411
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A A F+ M+ P V ++ + + + K A+ K S + P+ T +
Sbjct: 315 VNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSS 374
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC R + +L + G T +++++ LC +V A+ + +++
Sbjct: 375 LIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKDRD 434
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
QPN YT+ +I+G CK G + A + +++ + YN +++G
Sbjct: 435 IQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVWTYNIMING 483
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 65/147 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + AA+ ++++ V D+ N +I+ LC + + +
Sbjct: 162 YGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSLCKEKLVTEAYELYSEMI 221
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ PT T ++++ G C+ A M PN YTF +++ CK G +
Sbjct: 222 TKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYTFNILVDALCKEGKMK 281
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + MV++ +P+ V + ++MDG
Sbjct: 282 EAKNVLAMMVKQGVKPDIVTHTSLMDG 308
>Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:13907484-13905015 | 20130731
Length = 245
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 100/170 (58%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTL 103
+D AV+ F+ ML NP P + +FN + + ++K HY AISL + + V PDI T
Sbjct: 25 VDNAVSSFNHMLCVNPPPPIIEFNKILGSLVKSKNNHYPTAISLFNQLELNRVTPDIVTF 84
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NIVINC CHL F S+LG + K G +P TL T++ G+CL +NV A+ F H+
Sbjct: 85 NIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKGMCLNSNVKEALHFHNHVLA 144
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ + ++G +I G CKIG+T +A+ +R + + + V+Y AI+D
Sbjct: 145 HGFHLDQVSYGTLIYGLCKIGETRAALQMLRKIEGKLVNTDVVMYTAIID 194
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTL 103
+D V+ F+ +L P + +FN + + ++ HY AISL +R G+ PDI+T
Sbjct: 47 VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+INC CH+ F S++ + K G P T T NT++ GLCL V A+ F H+
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ + +++G +ING CKIG+T +A+ +R + + + N V+YN I+D
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + QM+A P V F++L A L +
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD YT NI+++ LC ++L ++ K G+ P T +++++G CL N V A
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G PN++++ +INGFCKI + A+ +M + P+ V YN+++DG
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A++ F+ M P +NSL + ++ + A L+ H +G
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+I+T N +I+ LC ++++ + G++P T N ++ GLC + +A
Sbjct: 414 QPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQ 473
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + + GY N++T+ ++NG CK G + A + M + P+AV Y ++
Sbjct: 474 DVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLI 530
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
QM AA P + ++ + K A+SL G+APD T N +I+ LC
Sbjct: 341 QMGAA---PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSG 397
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
R ++ ++ + G T N +++ LC ++V A+ + +++ G QP+ YTF
Sbjct: 398 RISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFN 457
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I G CK+G ++A ++++ + NA YN +++G
Sbjct: 458 ILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNG 497
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + + H AI+L+K+ G+ PD+YT NI+I LC + R V +
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLL 480
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T N +VNGLC E A M++ G P++ T+ +I + E
Sbjct: 481 SKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENE 540
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 541 KAEKLLREMIAR 552
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A F +M+ N P FN L + + + A +++ GV P++ T +
Sbjct: 259 LEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSS 318
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + + VL + + G P + T++NG C V A++ M+ G
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ T+ ++I+G CK G A + M + N YN ++D
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLID 426
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V ++SL A ++ G AP+ ++ +IN C ++
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
LS+ + G+ P T N++++GLC ++ A M + G N +T+
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I+ CK + A+ ++ + ++ +P+ +N ++ G
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + ++ A + ++L P FN+L + A+ + G
Sbjct: 109 LINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALG 168
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D ++ +IN LC + T L +L + ++ NTI++ LC V A
Sbjct: 169 FHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAY 228
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M P+ TF A+I GFC +G E A R MV ++ P+ +N ++D
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 64/147 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + A+ ++++ V ++ N +I+ LC + + +
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMI 235
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T + ++ G C+ + A R M P+ YTF +++ CK G+ +
Sbjct: 236 AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLK 295
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M++ PN V Y+++MDG
Sbjct: 296 GAKNMLVVMMKEGVMPNVVTYSSLMDG 322
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTL 103
+D V+ F+ +L P + +FN + + ++ HY AISL +R G+ PDI+T
Sbjct: 47 VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+INC CH+ F S++ + K G P T T NT++ GLCL V A+ F H+
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ + +++G +ING CKIG+T +A+ +R + + + N V+YN I+D
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + QM+A P V F++L A L +
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD YT NI+++ LC ++L ++ K G+ P T +++++G CL N V A
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G PN++++ +INGFCKI + A+ +M + P+ V YN+++DG
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A++ F+ M P +NSL + ++ + A L+ H +G
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+I+T N +I+ LC ++++ + G++P T N ++ GLC + +A
Sbjct: 414 QPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQ 473
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + + GY N++T+ ++NG CK G + A + M + P+AV Y ++
Sbjct: 474 DVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLI 530
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
QM AA P + ++ + K A+SL G+APD T N +I+ LC
Sbjct: 341 QMGAA---PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSG 397
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
R ++ ++ + G T N +++ LC ++V A+ + +++ G QP+ YTF
Sbjct: 398 RISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFN 457
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I G CK+G ++A ++++ + NA YN +++G
Sbjct: 458 ILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNG 497
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + + H AI+L+K+ G+ PD+YT NI+I LC + R V +
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLL 480
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T N +VNGLC E A M++ G P++ T+ +I + E
Sbjct: 481 SKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENE 540
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 541 KAEKLLREMIAR 552
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A F +M+ N P FN L + + + A +++ GV P++ T +
Sbjct: 259 LEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSS 318
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + + VL + + G P + T++NG C V A++ M+ G
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ T+ ++I+G CK G A + M + N YN ++D
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLID 426
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V ++SL A ++ G AP+ ++ +IN C ++
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
LS+ + G+ P T N++++GLC ++ A M + G N +T+
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I+ CK + A+ ++ + ++ +P+ +N ++ G
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + ++ A + ++L P FN+L + A+ + G
Sbjct: 109 LINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALG 168
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D ++ +IN LC + T L +L + ++ NTI++ LC V A
Sbjct: 169 FHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAY 228
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M P+ TF A+I GFC +G E A R MV ++ P+ +N ++D
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 64/147 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + A+ ++++ V ++ N +I+ LC + + +
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMI 235
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T + ++ G C+ + A R M P+ YTF +++ CK G+ +
Sbjct: 236 AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLK 295
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M++ PN V Y+++MDG
Sbjct: 296 GAKNMLVVMMKEGVMPNVVTYSSLMDG 322
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 103/172 (59%), Gaps = 1/172 (0%)
Query: 43 LKTLDAAVAFFHQML-AANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
+ ++ AV+ F+++L NP P + +FN + + +A+ H+ AIS ++ + PDI+
Sbjct: 32 IDNVNDAVSSFNRILHMKNPTPPIFEFNKILSSLAKLNHFNIAISFSQQMELKPIQPDIF 91
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
TL+I+INC CHL + + S+LG + K G P T TL T++ GLCL V A+ F +
Sbjct: 92 TLSILINCFCHLNQLNYAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDV 151
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ N ++G +ING CK G+T++A+ +R + +P+ V+YN I+D
Sbjct: 152 IAKGFYLNEVSYGTLINGLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIID 203
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 52 FFHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+FH + A F + + +L + ++ AA+SL+++ S V PD+ N +I+ L
Sbjct: 146 YFHNDVIAKGFYLNEVSYGTLINGLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSL 205
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C + + G + + + P T NT++ G + + AV M PN
Sbjct: 206 CKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNV 265
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
YTF +I+ CK G+ + A + M+++ EPN Y+++MDG
Sbjct: 266 YTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDG 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + + +M+ +P +N+L + A+ L+ R
Sbjct: 201 IIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKN 260
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++YT +I+I+ LC +VL ++ K G+ P AT +++++G V A
Sbjct: 261 VNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKAT 320
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G + ++ +INGFCK + AV + M ++ PN V YN+++DG
Sbjct: 321 YVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDG 379
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K +D AV F +M + N P +NSL + + + A I H G +I T
Sbjct: 349 KMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITY 408
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+ +++ LC + +++L + G++ T +V+GLC + A + + N
Sbjct: 409 SSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLN 468
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
Y ++ + +ING CK G + A+ + M + C P+ V Y I+
Sbjct: 469 NTYHLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIII 517
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ S+K ++ A F+ + V+ ++ + + K A++L K HS
Sbjct: 306 LMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKN 365
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ T N +I+ LC L R + + + G T +++++GLC + V A+
Sbjct: 366 MVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAI 425
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T ++N G Q + YT+ +++G CK G A + ++ +A +Y +++G
Sbjct: 426 TLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMING 484
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P + ++SL K A + GVA D+ + +++IN C +
Sbjct: 291 MIKQGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKM 350
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+++ + + P T T N++++GLC ++ A F M + G N T+ +
Sbjct: 351 VDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSS 410
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++G CK + A+ + + + + + Y ++DG
Sbjct: 411 LLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDG 449
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 69/164 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L + A F +M + ++SL + + AI+L+ + + G
Sbjct: 376 LIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQG 435
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ DIYT I+++ LC + V ++ ++NGLC E A+
Sbjct: 436 IQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMINGLCKEGFFDEAL 495
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
+ ME+ G P+ T+ II + + AV +R M+ R
Sbjct: 496 SLLSKMEDNGCTPDGVTYEIIIRALFENNRNDKAVKLIREMIAR 539
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 130 bits (327), Expect = 8e-31, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 98/172 (56%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+ +D AV F++M+ P P F+ L + R HY AISL + S G++P I T
Sbjct: 33 FRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIAT 92
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
I+INC H TAF S+L + K+G +P T NTI+NG C+ + A+ F +++
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GY + +T+G +ING K G ++A+ ++ M + +PN V+Y+A++DG
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Score = 105 bits (262), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 90/179 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ K +D A+ F ++ N P + +NSL + + + L+ H S
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T NI+I+ LC R L VL ++ K G++P T N +++G CL NNV A
Sbjct: 401 QPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAK 460
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +G +P+ + +ING+CK + A++ + M ++ P+ YN+++DG
Sbjct: 461 DIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Score = 78.6 bits (192), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + L+ + V PD YT NI+I+ LC R VL ++
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K G +P T N ++ G C NV A M G +P+ + +I+G+CK +
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A++ + + ++ P YN+++DG
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDG 379
Score = 77.8 bits (190), Expect = 8e-15, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL +I + A++ F Q+ + P + F L H A A SL+ SG
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT----------GLRPTTATLNTIVNGL 145
P++ T N +IN C + G++FK G T T++NGL
Sbjct: 121 YQPNLVTFNTIINGFC----------INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGL 170
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
+ +A+ + ME + QPN + A+I+G CK G A+ + ER +A
Sbjct: 171 SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA 230
Query: 206 VVYNAIMDG 214
V YN+++DG
Sbjct: 231 VTYNSLIDG 239
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 71/152 (46%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N+L ++ A L R G+ PD+ N++I+ C + + +
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ L PT A+ N++++GLC ++ M + P+ T+ +I+ CK
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A+ + M+++ +PN V YNA+MDG
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Score = 71.2 bits (173), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +D A+ F +M N P + +NSL + L+ SG
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PD+ T NI+++ C + +S+ + + G+ P T + IV+ LC + A
Sbjct: 541 QSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAE 599
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+H+ G PN T+ +IN CK G A+L + M + P+A+ + I+
Sbjct: 600 DALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656
Score = 70.5 bits (171), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 83/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S + + A F++M+ P V ++N L +TK A+ L K +
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P I + N +I+ LC+ R + +L + + P T N +++ LC E + A+
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN T+ A+++G+C + A MV+ EP+ + YN +++G
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Score = 67.4 bits (163), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 81/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + AA+ +M ++ P + +++L + + + A+ L + G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D T N +I+ C + R +L + + + P T N +++ LC E + A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +P+ T+ A++ G+C + A MV+R EP+ + YN ++DG
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A F++M+ + P + ++N L +T+ AI L K + PDI + N
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC+L R +L + +G P T N +++ C A++ R + G
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-G 574
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ YT AI++ CK + A +++++ C PN Y +++
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINA 623
Score = 61.6 bits (148), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L +++ AA+ L++ S V P++ + +I+ LC + F LGL
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC---KDGFVSDALGLCS 219
Query: 128 KTGLRPT---TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G R T N++++G C M P+ YTF +I+ CK G
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M +R +P+ V YNA+M+G
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEG 309
Score = 57.4 bits (137), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 1/164 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + +L + +M + P V +N L +T+ + AISL ++ G
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEG 574
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD YT + +++ LC + L + G P T ++N LC + + A+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
ME+ P++ TF II + +T+ A M+ R
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 96/167 (57%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
+ V+ F+ ML NP P + F + + + HY A+SL ++ +GVA ++ T++I+I
Sbjct: 48 SLVSSFNHMLHQNPIPPIFHFGVMLGSLVKANHYTTAVSLHRKMELNGVASNLITMSILI 107
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
NC CHL + SV + K G P L TI+ GLCL+ V A+ F + G+Q
Sbjct: 108 NCFCHLGQNPLSFSVFAKILKMGYEPNVIILTTIIKGLCLKGEVREALHFHDKVVAQGFQ 167
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N ++GA+ING CK+G+T +A+ +R + + +PN V+Y I+DG
Sbjct: 168 LNQVSYGALINGLCKVGETRAALELLRRVDGKIVQPNVVMYTMIIDG 214
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M+A FP V +N+L + AI L+ + + P++YT+
Sbjct: 219 KLVNDAFNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTM 278
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+++ C + +V+ ++ K G++P T N++++G CL V A M
Sbjct: 279 SILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQ 338
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + ++ +INGFCKI + A+ + M R P+ + Y++++DG
Sbjct: 339 RGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDG 389
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M P ++SL + ++ + A L+ G
Sbjct: 351 MINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRG 410
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T N ++N LC +++L G++PT T ++ GLC+ + A
Sbjct: 411 QQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQ 470
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY + YT+ A+I GFC G + A+ + M + C PNA Y I+
Sbjct: 471 VVFQDLLIKGYNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIII 527
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + M V+ ++ + + K AI L K + PD T
Sbjct: 323 VKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTIT 382
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+ +I+ LC R + ++ + G +P T N+++N LC ++V A+ R +
Sbjct: 383 YSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFK 442
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G QP T+ +I G C G + A + ++++ + + Y A++ G
Sbjct: 443 TQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYNLDVYTYTAMIRG 494
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +NSL + + H AI+L+++ + G+ P + T I+I LC R V
Sbjct: 413 PNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVV 472
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G T ++ G C E A+ M++ G PN+ T+ II K
Sbjct: 473 FQDLLIKGYNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIIILSLFK 532
Query: 183 IGDTESAVLCMRNMVER 199
+ + A +R M+ R
Sbjct: 533 KDENDMAEKLLREMIRR 549
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 76/179 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + AA+ ++ P V + + + + K A +L +
Sbjct: 176 LINGLCKVGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKR 235
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N +I+ C + + + +L + + P T++ +V+ C + A
Sbjct: 236 IFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAK 295
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G +PN T+ ++I+G+C + A + + M +R + Y+ +++G
Sbjct: 296 AVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMING 354
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 93/167 (55%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
DA +F H + NP + +FN + + + + H+ AIS K+ + PD++T NI+
Sbjct: 46 DAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNIL 105
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
INC CHL F SVL +FK G P T T+ T++ GLCL V A+ F + G+
Sbjct: 106 INCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF 165
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ++G +ING CK G+T +A+ +R + +PN V+YN I+D
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIID 212
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D AV F +M + + P +NSL + + + A L+ H+ G
Sbjct: 350 MINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG 409
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ T + +++ LC + ++++ + G++P T +V+GLC + A
Sbjct: 410 QPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQ 469
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY + + ++NG CK G + A+ + M + C P+AV Y ++
Sbjct: 470 AVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLV 526
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 55 QMLAANPFPCVKDFNSLF---TFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
+M+ FP V + +L V R K A+ L + + PD+YT NI+++ LC
Sbjct: 229 EMIVKRIFPDVVTYTTLIYGCLIVGRLKE---AVGLFNQMLLKNIKPDVYTFNILVDGLC 285
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+VL ++ K G+ T N++++G L A M G P+
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQ 345
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ +ING CK + AV + M + PN V YN+++DG
Sbjct: 346 SYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 88/179 (49%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K + A F+ M P V+ ++ + + +TK A++L K HS
Sbjct: 315 LMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKS 374
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+AP+ T N +I+ L R + ++ + G T +++++ LC + V A+
Sbjct: 375 MAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAI 434
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T +++ G QPN YT+ +++G CK G + A ++++ + + +YN +++G
Sbjct: 435 TLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNG 493
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L AV F+QML N P V FN L + + A +++ GV +I T N
Sbjct: 255 LKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNS 314
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ +++ V + + G+ P + + ++NGLC V AV + M +
Sbjct: 315 LMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKS 374
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN+ T+ ++I+G K G A + M R + + Y++++D
Sbjct: 375 MAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLD 422
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
++SL + + AI+LI + G+ P+IYT I+++ LC R +V +
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL 476
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G N +VNGLC E A++ ME+ G P++ T+ ++ + +
Sbjct: 477 IKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKND 536
Query: 188 SAVLCMRNMV 197
AV +R M+
Sbjct: 537 KAVKLLREMI 546
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 72/250 (28%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L+S+ L A++F QM P + FN L H A S++ + G
Sbjct: 70 ILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG 129
Query: 96 VAPDIYTLNIVINCLC--------------------HLRRTAFGLSVLGLVFKTG----- 130
PD T+ +I LC HL + ++G + GL KTG
Sbjct: 130 FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLC-KTGETRAA 188
Query: 131 -----------LRPTTATLNTIVNGLCLENNVASA----------------VTFT----- 158
++P NTI++ LC + V A VT+T
Sbjct: 189 LQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYG 248
Query: 159 -----RHMENAGY---------QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
R E G +P+ YTF +++G CK G+ + A + M+++ + N
Sbjct: 249 CLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSN 308
Query: 205 AVVYNAIMDG 214
V YN++MDG
Sbjct: 309 IVTYNSLMDG 318
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+ +L NP P +FN + + ++KHY + L K+ G+ P++ NI
Sbjct: 68 VDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC C L F SV + K G P T T T++ GLCL+ + A+ F + G
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+Q N ++G +I+G CK+G+T +A+ +R + + +PN V+Y+ I+DG
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDG 236
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ ++ L AV F++M++ N P V FN L ++ + A+ L+ H G
Sbjct: 268 LISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG 327
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T + +++ LC R +++L + G+RP T +++GLC + A
Sbjct: 328 QPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDAR 387
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ GY T+ + GFCK G + A + M E C P+A Y I
Sbjct: 388 NIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M++ P V +++L + A+ L + S + PD+YT
Sbjct: 241 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTF 300
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C + ++ L ++ + G P T ++I++ LC + V AV +++
Sbjct: 301 NILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKD 360
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
G +PN +T+ +I+G C G E A RN+ E
Sbjct: 361 QGIRPNMHTYTILIDGLCTSGKLEDA----RNIFE 391
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 53 FHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FH L A F + + +L + + AA+ L++R V P++ + +I+ +C
Sbjct: 179 FHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMC 238
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ + + G+ P T + +++G + AV M + +P+ Y
Sbjct: 239 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVY 298
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +++ FCK G A+ + M +R PN V Y++I+D
Sbjct: 299 TFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 341
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 69/152 (45%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V ++++ + + KH A L S G++P++ T + +I+ + + + +
Sbjct: 225 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDL 284
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ ++P T N +V+ C ++ A+ M + G PN T+ +I++ CK
Sbjct: 285 FNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ AV + + ++ PN Y ++DG
Sbjct: 345 THRVDKAVALLTKLKDQGIRPNMHTYTILIDG 376
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 98/168 (58%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+++L NP P + +F + + + + H+ AIS ++ G+ P+I TL I
Sbjct: 43 VDDAVSSFNRILNINPTPPIFEFGKILSSLVKLNHFHTAISFSQQMELKGIQPNIVTLTI 102
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN CHL + F S+LG + K G P T TL T++NGLCL V A F +
Sbjct: 103 LINSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGLCLNGEVKKAFHFYDDVIAKE 162
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+Q N +++G +ING CK G+T++A+ +R + +P+ V+Y I+D
Sbjct: 163 FQLNQFSYGILINGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIID 210
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+ FP V +++L A+ L
Sbjct: 208 IIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKN 267
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+I+ LC ++LGL+ K+G++ T +++++G N V A
Sbjct: 268 IDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMDGYFQVNEVNKAK 327
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G PN +++ +I+G C + AV + M R+ PN V YN+++ G
Sbjct: 328 DVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVTYNSLIYG 386
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + ++ A F M+ P + +N + + +K A++L K+ H
Sbjct: 313 LMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRN 372
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ T N +I LC R ++ L ++ + G T ++++ LC +N+ A+
Sbjct: 373 MVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAI 432
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M++ G +PN YT+ +I+ CK G A + M +R N V Y +++DG
Sbjct: 433 ALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDG 491
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ SL + + + AI+L + GV P++YT NI+I+ LC R A ++ +
Sbjct: 415 YTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMH 474
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T ++++GLC +N+ A+ F + + G Q + +T+ +I+G CK G +
Sbjct: 475 DRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLK 534
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A+ R ++ + + + Y ++ G
Sbjct: 535 NALEVFRILLIKGYHLDVLTYTVMISG 561
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A+A F +M P V +N L + ++ A A LI H G ++ T
Sbjct: 428 LDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTS 487
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC + + G++ T +++GLC + +A+ R + G
Sbjct: 488 LIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIKG 547
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
Y + T+ +I+G CK G + + + M E C P+A+ Y I+
Sbjct: 548 YHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPDAITYEIII 594
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+NS L L+ A + ++L P +L + A +
Sbjct: 103 LINSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGLCLNGEVKKAFHFYDDVIAKE 162
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ ++ I+IN LC T LS+L ++ ++P TI++ LC + V A
Sbjct: 163 FQLNQFSYGILINGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAY 222
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M PN T+ +I GFC +G + AV M+ ++ +P+ +N ++DG
Sbjct: 223 ELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDG 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K +D AV F +M N P +NSL + ++ + + LI G A ++ T
Sbjct: 356 KMVDEAVNLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITY 415
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++ LC +++ + G+ P T N +++ LC +A A M +
Sbjct: 416 TSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHD 475
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G N T+ ++I+G CK + + A+ + + + + Y ++DG
Sbjct: 476 RGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDG 526
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ SL + + + AI + + G+ D++T ++I+ LC R L V ++
Sbjct: 485 YTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVFRILL 544
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T +++GLC E +T ME G P++ T+ II G +
Sbjct: 545 IKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPDAITYEIIICALFGKGKID 604
Query: 188 SAVLCMRNMVER 199
A + M+ R
Sbjct: 605 MAEKLLCEMIAR 616
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 69/167 (41%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA++ + + P V + ++ + + K A L + P++ T + +I
Sbjct: 185 AALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLI 244
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
C + + + + + + P T N +++GLC + A M +G +
Sbjct: 245 YGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVK 304
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N T+ ++++G+ ++ + A MV PN YN ++DG
Sbjct: 305 LNVVTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDG 351
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+ +L NP +FN + + ++KHY +SL ++ G+ P+ T NI
Sbjct: 64 VDDAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 123
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC C L F SVL + K G P TLNT + G CL+ + A+ F + G
Sbjct: 124 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 183
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + ++G +ING CK+G+T +A+ +R + + + NAV+YN ++DG
Sbjct: 184 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDG 232
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A+ F++M+ N P V FN L + A +++ + P++ T N
Sbjct: 274 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNT 333
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C R+ G +V ++ K G++P T ++++G CL V A M G
Sbjct: 334 LVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRG 393
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N +++ +INGFCKI + A+ M +H P+ V YN+++DG
Sbjct: 394 VTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDG 442
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ + + KH A L + ++PD+ T + +I + + + + +
Sbjct: 226 YNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI 285
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
++P T N +V+G C E + A M +PN TF +++GFCK +
Sbjct: 286 LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMK 345
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+++ +PN V Y ++MDG
Sbjct: 346 EGKTVFAMMMKQGIKPNVVTYCSLMDG 372
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A F+ M V +N + + K A+ L H + PD+ T
Sbjct: 376 VKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVT 435
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I+ LC + ++ ++ + G P T N+I+N L + ++
Sbjct: 436 YNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK------------LK 483
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESA 189
+ G QPN +T +I G C+ G E+A
Sbjct: 484 DQGIQPNMHTDTILIKGLCQSGKLEAA 510
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P V + SL K A + GV ++++ NI+IN C
Sbjct: 351 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCK 410
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+++ + + + + P T N++++GLC ++ A M + G PN T
Sbjct: 411 IKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIIT 470
Query: 173 FGAIING 179
+ +I+N
Sbjct: 471 YNSILNA 477
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 98/171 (57%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ +D AV F++M+ P P F+ L + R HY AISL + S G++P I T
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
I+INC H TAF S+L + K+G +P T NTI+NG C+ + A+ F +++
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GY + +T+G +ING K G ++A+ ++ M + +PN V+Y+A++DG
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ K +D A+ F ++ N P + +NSL + + + L+ H S
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T NI+I+ LC R L VL ++ K G++P T N +++G CL NNV A
Sbjct: 401 QPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAK 460
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +G +P+ + +ING+CK + A++ + M ++ P+ YN+++DG
Sbjct: 461 DIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + L+ + V PD YT NI+I+ LC R VL ++
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K G +P T N ++ G C NV A M G +P+ + +I+G+CK +
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A++ + + ++ P YN+++DG
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDG 379
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL +I + A++ F Q+ + P + F L H A A SL+ SG
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK----------TGLRPTTATLNTIVNGL 145
P++ T N +IN C + G++FK G T T++NGL
Sbjct: 121 YQPNLVTFNTIINGFC----------INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGL 170
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
+ +A+ + ME + QPN + A+I+G CK G A+ + ER +A
Sbjct: 171 SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA 230
Query: 206 VVYNAIMDG 214
V YN+++DG
Sbjct: 231 VTYNSLIDG 239
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +D A+ F +M N P + +NSL + L+ SG
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PD+ T NI+++ C + +S+ + + G+ P T + IV+ LC + A
Sbjct: 541 QSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAE 599
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+H+ G PN T+ +IN CK G A+L + M + P+A+ + I+
Sbjct: 600 DALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N+L ++ A L R G+ PD+ N++I+ C + + +
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ L PT A+ N++++GLC ++ M + P+ T+ +I+ CK
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A+ + M+++ +PN V YNA+MDG
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S + + A F++M+ P V ++N L +TK A+ L K +
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P I + N +I+ LC+ R + +L + + P T N +++ LC E + A+
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN T+ A+++G+C + A MV+ EP+ + YN +++G
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + AA+ +M ++ P + +++L + + + A+ L + G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D T N +I+ C + R +L + + + P T N +++ LC E + A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +P+ T+ A++ G+C + A MV+R EP+ + YN ++DG
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A F++M+ + P + ++N L +T+ AI L K + PDI + N
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC+L R +L + +G P T N +++ C A++ R + G
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-G 574
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ YT AI++ CK + A +++++ C PN Y +++
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILIN 622
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L +++ AA+ L++ S V P++ + +I+ LC + F LGL
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC---KDGFVSDALGLCS 219
Query: 128 KTGLRP---TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G R T N++++G C M P+ YTF +I+ CK G
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M +R +P+ V YNA+M+G
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEG 309
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 1/164 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + +L + +M + P V +N L +T+ + AISL ++ G
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEG 574
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD YT + +++ LC + L + G P T ++N LC + + A+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
ME+ P++ TF II + +T+ A M+ R
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 94/166 (56%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A + F ++L NP P +FN + + ++KHY +SL ++ G+ PD +T NI+IN
Sbjct: 68 AFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPDFFTFNILIN 127
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C C L F SV + + G P T T T++ GLCL+ + A+ F ++ G+Q
Sbjct: 128 CFCQLGLIPFAFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQL 187
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +G +I+G CK+G+T +A+ +R + +PN V+Y+ I+DG
Sbjct: 188 DQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDG 233
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M++ P V +++L + AI L + + PD+YT
Sbjct: 238 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTF 297
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C + G +V ++ K G++P T ++++G CL V A + M
Sbjct: 298 NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ 357
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G P+ ++ +I+GFCKI + A+ + M +H P+ V YN+++DG
Sbjct: 358 RGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDG 408
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K +D A+ F +M + P V +NSL + + + A+ L+ H G
Sbjct: 370 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 429
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PDI T + +++ LC + +++L + G+RP T +++GLC + A
Sbjct: 430 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 489
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY T+ +I+GFC G + A+ + M + C P+AV Y I+
Sbjct: 490 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPDAVTYEIII 546
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + + M P ++ +N L + K A++L K H + PD+ T
Sbjct: 342 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 401
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I+ LC L + ++ L ++ + G+ P T ++I++ LC + V A+ ++
Sbjct: 402 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 461
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESA 189
+ G +PN YT+ +I+G CK G E A
Sbjct: 462 DQGIRPNMYTYTILIDGLCKGGRLEDA 488
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P V + SL K A S++ GV PDI + NI+I+ C
Sbjct: 317 FAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCK 376
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+++ +++ + + P T N++++GLC ++ A+ M + G P+ T
Sbjct: 377 IKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIIT 436
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +I++ CK + A+ + + ++ PN Y ++DG
Sbjct: 437 YSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 478
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
AA+ L++R + V P++ + +I+ +C + + + G+ P T + ++
Sbjct: 207 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 266
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+G + A+ M +P+ YTF +++GFCK G + M+++ +
Sbjct: 267 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 326
Query: 203 PNAVVYNAIMDG 214
PN V Y ++MDG
Sbjct: 327 PNVVTYCSLMDG 338
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 71/152 (46%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V ++++ + + KH A L S G++P++ T + +I+ + + + +
Sbjct: 222 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 281
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ ++P T N +V+G C + + T M G +PN T+ ++++G+C
Sbjct: 282 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 341
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + A + M +R P+ YN ++DG
Sbjct: 342 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDG 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L + A+ +M P + ++S+ + + AI+L+ + G
Sbjct: 405 LIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQG 464
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++YT I+I+ LC R ++ + G T T +++G C + A+
Sbjct: 465 IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAL 524
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
T M++ P++ T+ II + + A +R M+ R
Sbjct: 525 TLLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAE-KLREMITR 567
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 88/155 (56%)
Query: 59 ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAF 118
+ P P V FN++ V + KH AISL+K+ GV P I+TL+I INC CHL F
Sbjct: 35 SEPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGF 94
Query: 119 GLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIIN 178
SVLG+V K G +P TL T++ GLC+ V A+ F ++ G + +G +IN
Sbjct: 95 AFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLIN 154
Query: 179 GFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G CKIG + A ++ M + +PN V+YN I+D
Sbjct: 155 GLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 189
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K +D AV+ F++M N + ++SL + ++ + A L ++ G P++ T
Sbjct: 335 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 394
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+I+ C ++ G+ + L+ GL PT T N ++NG C + A+ M++
Sbjct: 395 NILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS 454
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+S T+ ++ +G CK G A + M + YN ++D
Sbjct: 455 KNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLD 504
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + + SL RT + L+ + + P++YT N++I+ C + +
Sbjct: 214 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGM 273
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L+ K G +P T NT+++G CL NV A + G P+ +++ +I G+CK
Sbjct: 274 FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCK 333
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ AV M ++ + V+Y++++DG
Sbjct: 334 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 365
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F + P V + L + K A+SL + DI + +I+
Sbjct: 305 ARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLID 364
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R ++ + + G P T N +++ C ++ + + M G P
Sbjct: 365 GLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTP 424
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +ING+CK A+ + M ++ P+++ YN++ DG
Sbjct: 425 TVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 470
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R K ++A F+ M+ P + FN+L + + A L G+ PD+
Sbjct: 263 RKGKMIEAQ-GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 321
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
++ I+I C +R +S+ + + +++++GLC ++ A
Sbjct: 322 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 381
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N G PN T+ +I+ FCKI D + + + M + P + YN +++G
Sbjct: 382 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 435
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 59/147 (40%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + A L++ V P+I N++I+ C T + +
Sbjct: 149 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 208
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T +++ G C M N PN YTF +I+ FC+ G
Sbjct: 209 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 268
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A MV+R +P+ V +N ++ G
Sbjct: 269 EAQGMFNLMVKRGQQPDIVTFNTLISG 295
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F + P P V +N L + + I L K G+ P + T NI+IN
Sbjct: 375 AWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 434
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C +R +++L ++ L P + T N++ +GLC ++ A + M G
Sbjct: 435 GYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPV 494
Query: 169 NSYTFGAIINGFCKIGDT 186
+ T+ +++ FCK D
Sbjct: 495 DVATYNVLLDAFCKAQDV 512
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ G+ D +IN LC + R+ +L + ++P N I++ C +
Sbjct: 139 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 198
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A + + G P+ T+ ++I GFC+ G M MV ++ PN +N ++
Sbjct: 199 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 258
Query: 213 D 213
D
Sbjct: 259 D 259
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 2/167 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKH--YAAAISLIKRAHSSGVAPDIYTLNIV 106
A++ F++ML NP P + +FN + + ++ + Y AISL R + + P I T N V
Sbjct: 30 AISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTV 89
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
INC CHL F SVL + K G P T TL T++ GLCL V A+ F H+ G+
Sbjct: 90 INCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGF 149
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ N ++G +ING CK+G+T +A+ +R + + N V+Y+ I+D
Sbjct: 150 RLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIID 196
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
+K +D A++ F++M P ++SL + +++ + A L+ + H+ G D+
Sbjct: 322 KIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVI 381
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T ++ LC + ++++ + G++P T N +++GLC E +A + +
Sbjct: 382 TYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDL 441
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
GY+ +T+ +ING C G + A+ + M + C P+ V Y I+
Sbjct: 442 LIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETII 492
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + + A QM A V + S + + A++L+K+ G
Sbjct: 351 LIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQG 410
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+I T NI+I+ LC R + + G + T T N ++NGLCLE A+
Sbjct: 411 IQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAM 470
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
T ME+ G P+ T+ II K + A +R M+ R
Sbjct: 471 TLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIAR 514
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + + + + K A+SL G+ PD T + +I+ LC R + +
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL 367
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + G T + ++ LC + V AV + +++ G QPN T+ +I+G CK
Sbjct: 368 LDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G E+A + ++++ + + YN +++G
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMING 459
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVAR---TKHYAAAISLI--------KRAH---- 92
A FH+M+ N P V FN L + + TK ++++ K H
Sbjct: 241 EAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNI 300
Query: 93 --SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENN 150
V PD+++ I+I LC ++ LS+ + G+ P T +++++GLC
Sbjct: 301 IGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER 360
Query: 151 VASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
++ A M G + T+ + ++ CK + AV ++ + ++ +PN YN
Sbjct: 361 ISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNI 420
Query: 211 IMDG 214
++DG
Sbjct: 421 LIDG 424
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%)
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+IN LC + T L VL + + +TI++ LC E V A M
Sbjct: 158 ILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVK 217
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ TF A+I GFC +G + A MV + P+ +N ++D
Sbjct: 218 KVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDA 267
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D V+ F+++L NP + +FN + + +A+ H+ AIS ++ G+ PDI+TL+I
Sbjct: 35 VDDVVSSFNRILNINPTQPIFEFNKILSSLAKLNHFNIAISFSQQMELKGIQPDIFTLSI 94
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC C L + F S+LG + K G P T TL T++ GLCL V A+ F + G
Sbjct: 95 LINCFCQLGQINFAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKG 154
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE-RHCEPNAVVYNAIMD 213
+ N ++G +ING CK G+T +A+ +R + P+ ++Y AI+D
Sbjct: 155 FYLNEVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIID 203
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S K + A + +M+ +P V FNSL + A+ L
Sbjct: 201 IIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKN 260
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++YT NI+++ LC SVL ++ K + P T N++++G L V A
Sbjct: 261 TNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKAT 320
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G PN ++ +ING CK+ + AV+ + M + PN + YN+++DG
Sbjct: 321 YVFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDG 379
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAH--S 93
++N + +K +D AV F +M + + P +NSL + ++ + LI
Sbjct: 341 MINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKD 400
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
GV PD+YT +I+I+ LC R A ++ + G T ++++GLC +N+
Sbjct: 401 LGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDK 460
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
A+ M++ G +PN YT+ +I+ CK G A + ++ER
Sbjct: 461 AIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADACVWNWLIMER 506
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A F + P V+ ++ + + + K A+ L K HS
Sbjct: 306 LMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKS 365
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLG--LVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+ P+ T N +I+ LC R + ++ + G++P T + +++ LC +A
Sbjct: 366 LTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIAD 425
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M + G N T+ ++I+G CK + + A+ M + EPN YN ++D
Sbjct: 426 AWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILID 485
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ + P V +NSL K A + GV P++ + +++IN LC ++
Sbjct: 291 MIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKM 350
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME--NAGYQPNSYTF 173
+ + + L P T T N++++GLC ++ M+ + G +P+ YT+
Sbjct: 351 VDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTY 410
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+I+ CK G A + M +R N V Y +++DG
Sbjct: 411 SILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDG 451
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ AV F++M+ N P V FN L + + A S++ V PD+ T N +
Sbjct: 247 EEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSL 306
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
++ ++ V + + G+ P + + ++NGLC V AV + M +
Sbjct: 307 MDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSL 366
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH--CEPNAVVYNAIMD 213
PN+ T+ ++I+G CK G + M + +P+ Y+ ++D
Sbjct: 367 TPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYSILID 415
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQML-AANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
+D AV+ F+++L NP P + +F + + + H++ AIS + G+ P+I TL+
Sbjct: 34 VDDAVSSFNRILHMNNPTPPIFEFGKILGSLVKMNHFSTAISFSHQMELKGIQPNIVTLS 93
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+IN CHL + + S+LG + K G +P T TL T++NGLCL + A+ F H+
Sbjct: 94 ILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAK 153
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ N ++G +ING CK G+T++A+ + + +P+ V+YN I+D
Sbjct: 154 GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIID 202
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K ++ A F +M ++N P +NSL + ++ + L+ H G
Sbjct: 340 MINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIG 399
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ T N +++ LC + +++L + G++P T +V+GLC + A
Sbjct: 400 QPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQ 459
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY N + ++N FCK G + A+ + M + C PNA+ Y ++
Sbjct: 460 EIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLI 516
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 52 FFHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+FH + A F + L + ++ AA+ L+++ V PD+ N +I+ L
Sbjct: 145 YFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDAL 204
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C + + G + + + P T NT++ G + + AV M P+
Sbjct: 205 CKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDV 264
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +++G CK G+ + A + M+++ EP+ V Y+++MDG
Sbjct: 265 LTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDG 308
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A F+ + P V +N + + + K A +L K HSS
Sbjct: 305 LMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSN 364
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD + N +I+ LC R + +L + G T N++++ LC + V A+
Sbjct: 365 MTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDALCKNHQVDKAI 424
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ +++ G QPN YT+ +++G CK G E A +++ + N +YN +++
Sbjct: 425 ALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMVN 482
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P + ++SL K A L GV P++++ NI+IN LC +
Sbjct: 290 MIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKM 349
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
++ + + + P T + N++++GLC ++ M + G N T+ +
Sbjct: 350 VNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNS 409
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ CK + A+ ++ + ++ +PN Y ++DG
Sbjct: 410 LLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDG 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 73/171 (42%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K + + +M+ P V +N+L + A+ L+ + ++PD+ T
Sbjct: 208 KLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTF 267
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++ LC VL ++ K + P T +++++G L V A +
Sbjct: 268 TTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPL 327
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN +++ +ING CK A + M + P+ V YN+++DG
Sbjct: 328 RGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDG 378
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + + AI+L+K+ G+ P++YT I+++ LC R + +
Sbjct: 407 YNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLL 466
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G + N +VN C E A++ ME+ G PN+ T+ +I + +
Sbjct: 467 TKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLICALFENNKND 526
Query: 188 SAVLCMRNMVER 199
AV +R M+ R
Sbjct: 527 KAVKLLREMIVR 538
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 50 VAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTLNIVI 107
V+ FH+ML P P + +FN + + +T HY AAISL + +G+ D T NI+I
Sbjct: 54 VSSFHRMLLMRPTPSILEFNKILGSLVKTNNNHYTAAISLSHQLELNGITADTVTFNILI 113
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
NC CHL F S+ + K G PTT T NT++NG+CL + A+ F HM +
Sbjct: 114 NCYCHLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKIKEALHFHDHMLAHEFH 173
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N T+ +ING CK+G T A+ +R + + N +++N I+D
Sbjct: 174 LNQVTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIID 219
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + QM+ P V FNSL A L
Sbjct: 217 IIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKN 276
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++YT NI+++ LC ++L ++ K G+ P T ++I++G CL N V A
Sbjct: 277 INPNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAK 336
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G P++ ++ +INGFCKI A M R PN V Y++++DG
Sbjct: 337 HVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDG 395
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A FH+M+ N P V FN L + + + A +L+ GV P++ T +
Sbjct: 262 LIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSS 321
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + VL + + G+ P + N ++NG C + A + M G
Sbjct: 322 IMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRG 381
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ T+ ++I+G CK+G A + M + P+ YN+++D
Sbjct: 382 ISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLIDA 430
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
+ + D L V + KH + I+ + GV PD + NI+IN C ++ S
Sbjct: 319 YSSIMDGYCLVNEVNKAKHVLSTITRM------GVPPDAQSYNIMINGFCKIKMINEAFS 372
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+ + G+ P T T +++++GLC ++ A F M + G P+ T+ ++I+ C
Sbjct: 373 LFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLIDALC 432
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
K + A++ ++ + ++ + N YN ++DG
Sbjct: 433 KNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDG 465
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N + + K A SL G++P+ T + +I+ LC L R ++
Sbjct: 349 PDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEF 408
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G P T N++++ LC ++V A+ + +++ G Q N YT+ +I+G CK
Sbjct: 409 VDEMRDNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDGLCK 468
Query: 183 IGDTESAV-------LCMRNMVERHCEPNAVVYNAIM 212
G + A + M + C P+AV I+
Sbjct: 469 QGRLKDAQGLLNEAETLLSKMEDNGCVPDAVTCETII 505
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Query: 53 FHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FH + A+ F + + L + + A+ L+++ V ++ N +I+ LC
Sbjct: 163 FHDHMLAHEFHLNQVTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLC 222
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ + + + P T N+++ G C+ + A M PN Y
Sbjct: 223 KEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVY 282
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +++ CK G+ + A + M++ PN V Y++IMDG
Sbjct: 283 TFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDG 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 7/171 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K ++ A + F++M P ++SL + + + A + +G
Sbjct: 357 MINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNG 416
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T N +I+ LC + ++ + G++ T N +++GLC + + A
Sbjct: 417 QPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDGLCKQGRLKDAQ 476
Query: 156 -------TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
T ME+ G P++ T II + E A +R M+ R
Sbjct: 477 GLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIAR 527
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 5/172 (2%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTL 103
+D AV+ F++ML P P + +FN + T + + +++ ISL ++ + P I TL
Sbjct: 36 VDDAVSSFNRMLRMRPTPPIIEFNQILTSLVKIDKNNFSTVISLFRQMEFQRIHPSIVTL 95
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+INC HLR+ F S+ G + K G P NT++ GLCL N+V A+ F +
Sbjct: 96 SILINCYSHLRQMKFAFSLFGKILKMGCHPDVIIFNTLIKGLCLNNDVKEALHFHDKLVA 155
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC--EPNAVVYNAIMD 213
G+Q + ++G +ING CK+G T++A+ +R +ER P+ V+Y+ I+D
Sbjct: 156 QGFQLSKVSYGTLINGLCKVGQTQAALQLLRR-IERQLLFRPDVVMYSIIID 206
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K LD AV+ F +M + N V ++SL + ++ +A L G
Sbjct: 344 MINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRG 403
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T N +++ LC +T +++L + G++ T N +++GLC + + A
Sbjct: 404 QPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQ 463
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R + Y + T+ +ING CK + A+ + M + C P+A+ Y I+
Sbjct: 464 KIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDAITYEIII 520
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A F+ M+ P ++ + + + + K A+SL + HS+ + D+ T +
Sbjct: 319 VNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSS 378
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN LC R + + G P T N++++ LC + A+ M++ G
Sbjct: 379 LINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQG 438
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
Q + +T+ +I+G CK G + A R+++ + + V YN +++G
Sbjct: 439 IQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMING 487
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L ++M+ N P V FN+L + + A LI GV P+I T ++
Sbjct: 249 LKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSV 308
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + + + + G+ P + ++NGLC + AV+ M +
Sbjct: 309 LMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTN 368
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ ++ING CK G SA M++R P+ + YN+++D
Sbjct: 369 MTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDA 417
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + L +A F +ML P V +NSL + ++ AI+L+ + G
Sbjct: 379 LINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQG 438
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ DI+T NI+I+ LC R + + T N ++NGLC E+ + A+
Sbjct: 439 IQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEAL 498
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
T ME G P++ T+ II G + A +R M+ R
Sbjct: 499 TLLSKMEAKGCIPDAITYEIIIRALFGKGVNDKAEKLLREMIAR 542
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L+ + A + F ++L P V FN+L + A+ + + G
Sbjct: 98 LINCYSHLRQMKFAFSLFGKILKMGCHPDVIIFNTLIKGLCLNNDVKEALHFHDKLVAQG 157
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGL-RPTTATLNTIVNGLCLENNVASA 154
+ +IN LC + +T L +L + + L RP + I++ LC + +V A
Sbjct: 158 FQLSKVSYGTLINGLCKVGQTQAALQLLRRIERQLLFRPDVVMYSIIIDNLCKDKHVNDA 217
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M P+ +T+ ++I+GFC +G + + + MV ++ P+ +N ++D
Sbjct: 218 FDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDA 277
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAHSSGVAPDI 100
K ++ A + +M+ P V + SL F V + K L+ + PD+
Sbjct: 212 KHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKE---VFVLLNEMVLKNINPDV 268
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
YT N +++ L + ++ ++ K G+ P T + +++G CL N V A
Sbjct: 269 YTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNS 328
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P+ ++ +ING CK+ + AV M + + + Y+++++G
Sbjct: 329 MMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLING 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V ++ + + + KH A L ++PD++T +I+ C + + +
Sbjct: 196 PDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVL 255
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + P T NT+V+ L E V A M G +PN T+ +++G+C
Sbjct: 256 LNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYCL 315
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + A +M++R P+ Y +++G
Sbjct: 316 VNEVNKAKDIFNSMMQRGMTPDIQSYTIMING 347
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 50 VAFFHQMLAANPFPCVKDFNSLFTFV--ARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
V+ FH+ML P P + +FN + + A HY AISL + G+ P I T NI++
Sbjct: 42 VSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILV 101
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
NC CHL F S+ + K G PTT T NT++NG+CL + A+ F H+ G+
Sbjct: 102 NCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFH 161
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ++ +ING CKIG+T +A+ ++ + + + V+YN I++
Sbjct: 162 LDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIIN 207
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K +D A++ F +M P +NSL + + + A L+ H++G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ DI T N +I+ LC ++++ + G++P+ T N +++GLC + +A
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY N++T+ +ING CK G A + + M P+AV Y I+
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETII 521
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P +N + + + K A+SL K G+APD T N +I+ LC L R ++ +
Sbjct: 337 PHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQL 396
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G+ T N++++ LC +++ A+ + +++ G QP+ YT+ +I+G CK
Sbjct: 397 VDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCK 456
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G ++A ++++ + NA YN +++G
Sbjct: 457 GGRLKNAQDVFQDLLIKGYSVNAWTYNIMING 488
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++NS+ K + A + +M+ P V FNSL A L
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT +I+++ LC ++L ++ K G+ P T +++++G CL N V A
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P+++++ +ING KI + A+ + M + P+ V YN+++DG
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDG 383
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + + H AI+L+K+ G+ P +YT NI+I+ LC R V +
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T N ++NGLC E A MEN G P++ T+ II + + E
Sbjct: 472 IKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENE 531
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 532 KAEKLLREMIIR 543
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 78/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N I L A+ F ++A + +L + + AA+ ++K+
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V D+ NI+IN LC + + + + + P T N+++ G C+ + A
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M P+ YTF +++ CK G+ A + M+++ P+ V Y+++MDG
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDG 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A FH+M+ N P V F+ L + + + A +++ GV PD+ T +
Sbjct: 250 LKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSS 309
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + V + + G+ P + N ++NGL V A++ + M G
Sbjct: 310 LMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG 369
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P++ T+ ++I+G CK+G A + M + + YN+++D
Sbjct: 370 IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLID 417
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L + A + F ++L P FN+L + A+ + G
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D + +IN LC + T L +L + + N I+N LC + V+ A
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M P+ TF ++I GFC +G + A MV ++ P+ ++ ++D
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVD 277
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 91/165 (55%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV+ F+ +L NP P +F + + ++KHY +SL ++ G+ P+ NI+IN
Sbjct: 54 AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C C L F SVL + K G P T TLNT + G CL+ + A+ F + G+
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ++G +ING CK+G+T +A+ +R + + + + V+Y+ I+D
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIID 218
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K ++ A + +M++ + +++L + AI L + S
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+++ C R + L ++ K G++P T N++++G CL N V A
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G ++ +INGFCKI + A+ + M + PN + YN+++DG
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDG 394
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M FP V +NSL + ++ + A+ LI H G
Sbjct: 356 VINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRG 415
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T + +++ LC +++L + G+RP T +++GLC + A
Sbjct: 416 QQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDAR 475
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY T+ +I GFC G + A+ + M + C P+A+ Y I+
Sbjct: 476 NIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A+ F++M + N P V FN L + A + + G+ PDI T N
Sbjct: 261 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNS 320
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + S+L + G+ T + N ++NG C V A+ + M +
Sbjct: 321 LMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ 380
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN T+ ++I+G CK G A+ + M +R +P+ + Y++I+D
Sbjct: 381 IFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILD 428
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V+ +N + + K A+ L K H + P++ T N +I+ LC R ++ L ++
Sbjct: 350 VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELID 409
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
L+ G +P T ++I++ LC + V A+ +++ G +PN YT+ +I+G CK G
Sbjct: 410 LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469
Query: 185 DTESAVLCMRNMVE 198
E A RN+ E
Sbjct: 470 RLEDA----RNIFE 479
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P + +NSL A S++ GV + + NIVIN C ++
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM 365
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ + + + P T N++++GLC ++ A+ M + G QP+ T+ +
Sbjct: 366 VDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSS 425
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++ CK + A+ + + ++ PN Y ++DG
Sbjct: 426 ILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+++L + P V +F + + + + + A+S + G+ PDI TL+I
Sbjct: 50 VDDAVSSFNRILHISSTP-VFEFGKILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSI 108
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN CHL + + S+LG + K G +P T TL T++NGLCL + A+ F H+ G
Sbjct: 109 LINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKG 168
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ N ++G +ING CK G+T++A+ + + +P+ V+YN I+D
Sbjct: 169 FHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIID 216
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D AV F +M + + P +NSL + + + I H G
Sbjct: 326 MINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRG 385
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
DI T N + + LC + +++L + G++P+ + + GLC + A
Sbjct: 386 QPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQ 445
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R + GY ++ + +ING CK G + A+ + M + C P+ V Y I+
Sbjct: 446 EVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIII 502
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A F+ + P V +N + + + K A++L K HS
Sbjct: 291 LMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKD 350
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ T N +I+ LC L R + + + G T N++ +GLC + V A+
Sbjct: 351 MIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAI 410
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +++ G QP+ Y++ + G CK G E A R++ + +A +Y +++G
Sbjct: 411 ALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMING 469
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 44/222 (19%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L+S+ L + AV+F HQM P + + L A S++ + G
Sbjct: 74 ILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSILGKILKLG 133
Query: 96 VAPDIYTLNIVINCLC--------------------HLRRTAFGLSVLGLVFKTG----- 130
P+ TL +IN LC HL ++G+ + GL K+G
Sbjct: 134 YQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLC-KSGETKAA 192
Query: 131 -----------LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
++P NTI++ LC + V+ M PN T+ +I G
Sbjct: 193 LQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYG 252
Query: 180 FCKIGDTESAVLCMRN-------MVERHCEPNAVVYNAIMDG 214
F +G + AV ++ M+++ EP+ V Y+++MDG
Sbjct: 253 FSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDG 294
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P + ++SL K A L GV P++++ NI+IN LC +
Sbjct: 276 MIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKM 335
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+++ + + P T T N++++GLC V+ F M + G + T+ +
Sbjct: 336 VDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNS 395
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +G CK + A+ ++ + ++ +P+ Y + G
Sbjct: 396 LFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVG 434
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI---NCLCHLRRTAFG 119
P V +N++ F+ + K + L + + P++ T N +I + L ++
Sbjct: 206 PDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGE 265
Query: 120 LS----VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ VL ++ K + P T +++++G L V A + G PN +++
Sbjct: 266 VKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNI 325
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ING CK + AV + M + PN V YN+++DG
Sbjct: 326 MINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDG 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSLF + + AI+L+K+ G+ P +Y+ I+ LC R V +
Sbjct: 393 YNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLT 452
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G ++NGLC E A++ M++ G P+ T+ II + +
Sbjct: 453 IKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRND 512
Query: 188 SAVLCMRNMVER 199
AV +R M+ R
Sbjct: 513 KAVKFIREMIAR 524
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+++L + P V +F + + + + + A+S + G+ PDI TL+I
Sbjct: 50 VDDAVSSFNRILHISSTP-VFEFGKILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSI 108
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN CHL + + S+LG + K G +P T TL T++NGLCL + A+ F H+ G
Sbjct: 109 LINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKG 168
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ N ++G +ING CK G+T++A+ + + +P+ V+YN I+D
Sbjct: 169 FHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIID 216
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D AV F +M + + P +NSL + + + I H G
Sbjct: 326 MINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRG 385
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
DI T N + + LC + +++L + G++P+ + + GLC + A
Sbjct: 386 QPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQ 445
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R + GY ++ + +ING CK G + A+ + M + C P+ V Y I+
Sbjct: 446 EVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIII 502
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A F+ + P V +N + + + K A++L K HS
Sbjct: 291 LMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKD 350
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ T N +I+ LC L R + + + G T N++ +GLC + V A+
Sbjct: 351 MIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAI 410
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +++ G QP+ Y++ + G CK G E A R++ + +A +Y +++G
Sbjct: 411 ALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMING 469
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 44/222 (19%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L+S+ L + AV+F HQM P + + L A S++ + G
Sbjct: 74 ILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSILGKILKLG 133
Query: 96 VAPDIYTLNIVINCLC--------------------HLRRTAFGLSVLGLVFKTG----- 130
P+ TL +IN LC HL ++G+ + GL K+G
Sbjct: 134 YQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLC-KSGETKAA 192
Query: 131 -----------LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
++P NTI++ LC + V+ M PN T+ +I G
Sbjct: 193 LQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYG 252
Query: 180 FCKIGDTESAVLCMRN-------MVERHCEPNAVVYNAIMDG 214
F +G + AV ++ M+++ EP+ V Y+++MDG
Sbjct: 253 FSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDG 294
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P + ++SL K A L GV P++++ NI+IN LC +
Sbjct: 276 MIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKM 335
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+++ + + P T T N++++GLC V+ F M + G + T+ +
Sbjct: 336 VDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNS 395
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +G CK + A+ ++ + ++ +P+ Y + G
Sbjct: 396 LFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVG 434
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI---NCLCHLRRTAFG 119
P V +N++ F+ + K + L + + P++ T N +I + L ++
Sbjct: 206 PDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGE 265
Query: 120 LS----VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ VL ++ K + P T +++++G L V A + G PN +++
Sbjct: 266 VKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNI 325
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ING CK + AV + M + PN V YN+++DG
Sbjct: 326 MINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDG 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSLF + + AI+L+K+ G+ P +Y+ I+ LC R V +
Sbjct: 393 YNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLT 452
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G ++NGLC E A++ M++ G P+ T+ II + +
Sbjct: 453 IKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRND 512
Query: 188 SAVLCMRNMVER 199
AV +R M+ R
Sbjct: 513 KAVKFIREMIAR 524
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 93/163 (57%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+F H +L NP P FN + + + + KH++ A+SL ++ +G+ D +T NI+INC
Sbjct: 47 SFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCF 106
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
L + S+ + K G PT T NT++ GLCL+ ++ A+ F + G+ +
Sbjct: 107 SQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQ 166
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++G +ING CK+G +A+ ++ + + +PNAV+YN I+D
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIID 209
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + QM+A P V +N+L + + AI L + + P++YT
Sbjct: 215 KLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTF 274
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C + VL ++ K ++P T N++++G C N V A M +
Sbjct: 275 NILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS 334
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G N + ++NGFCKI + A+ M R PN V Y++++DG
Sbjct: 335 GGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M P V ++SL + + A+ L+ H G
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T + +++ LC +++L + G+RP T ++ GLC + A
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + Y + +I GFC G + A+ + M + C PNA Y ++
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVI 523
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 53 FHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FH + A F + + +L + + AA+ L+KR V P+ N++I+ +C
Sbjct: 153 FHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMC 212
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ + + + P T N +++G + + A+ M+ PN Y
Sbjct: 213 KAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVY 272
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +++GFCK G A + + M++ +P+ V YN++MDG
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDG 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ S+ ++ A F M + V+ + ++ + K AI+L +
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK 371
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T + +I+ LC L R + L ++ + G P T ++I++ LC ++V A+
Sbjct: 372 IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAI 431
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++++ G +P+ YT+ +I G C+ G E A +++ + + Y ++ G
Sbjct: 432 ALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQG 490
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 69/164 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L + A+ +M P + ++S+ + + H AI+L+ G
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT I+I LC R +V + G ++ G C + A+
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
ME+ G PN+ T+ +I + + ++A +R M+ R
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVR 545
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 93/163 (57%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+F H +L NP P FN + + + + KH++ A+SL ++ +G+ D +T NI+INC
Sbjct: 47 SFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCF 106
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
L + S+ + K G PT T NT++ GLCL+ ++ A+ F + G+ +
Sbjct: 107 SQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQ 166
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++G +ING CK+G +A+ ++ + + +PNAV+YN I+D
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIID 209
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + QM+A P V +N+L + + AI L + + P++YT
Sbjct: 215 KLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTF 274
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C + VL ++ K ++P T N++++G C N V A M +
Sbjct: 275 NILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS 334
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G N + ++NGFCKI + A+ M R PN V Y++++DG
Sbjct: 335 GGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M P V ++SL + + A+ L+ H G
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T + +++ LC +++L + G+RP T ++ GLC + A
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + Y + +I GFC G + A+ + M + C PNA Y ++
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVI 523
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 53 FHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FH + A F + + +L + + AA+ L+KR V P+ N++I+ +C
Sbjct: 153 FHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMC 212
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ + + + P T N +++G + + A+ M+ PN Y
Sbjct: 213 KAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVY 272
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +++GFCK G A + + M++ +P+ V YN++MDG
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDG 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ S+ ++ A F M + V+ + ++ + K AI+L +
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK 371
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T + +I+ LC L R + L ++ + G P T ++I++ LC ++V A+
Sbjct: 372 IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAI 431
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++++ G +P+ YT+ +I G C+ G E A +++ + + Y ++ G
Sbjct: 432 ALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQG 490
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 69/164 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L + A+ +M P + ++S+ + + H AI+L+ G
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT I+I LC R +V + G ++ G C + A+
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
ME+ G PN+ T+ +I + + ++A +R M+ R
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVR 545
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
ML NP P + +FN + + ++ HY AISL + + + P I TLNI+INC HL
Sbjct: 1 MLRMNPTPSIVEFNKILGSIVKSNNNHYTTAISLFHQLELNRITPTIVTLNILINCYGHL 60
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
F S+ + K G PTT T +T++NG+CL+ + A+ F + G+ + ++
Sbjct: 61 GEITFAFSIFAKILKLGYHPTTITFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSY 120
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
GA+I+G CKIG+T +A+ +R + + N V+YN I+D
Sbjct: 121 GALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIID 160
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 3/178 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + QM+ P V +SL A L
Sbjct: 158 IIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKN 217
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+IYT I+I+ LC + +V+ ++ K G+ PT T NT+++G CL+N V A
Sbjct: 218 INPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLDNEVNKAK 277
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ PN +++ IING CKI + A+ + M HCEPN V Y++++D
Sbjct: 278 NVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEM---HCEPNTVTYSSLID 332
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K +D A+ FF +M P ++SL + ++ + A L+ + H G
Sbjct: 298 IINGLCKIKMVDEALNFFKEMHCE---PNTVTYSSLIDALCKSGRISHAWELLDQMHDRG 354
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+I T N +++ LC + ++++ + G++P T N +++GLC E + +A
Sbjct: 355 QPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQ 414
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY+ +T+ +ING C G + A+ + M + C P+ V Y I+
Sbjct: 415 VIFQDLLIKGYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETII 471
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + + AI+L+K+ G+ P+I T NI+I+ LC R + +
Sbjct: 362 YNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLL 421
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G + T NT++NGLCLE A+T ME+ G P+ T+ II K + +
Sbjct: 422 IKGYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIYALFKNDEND 481
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 482 KAEKLLREMITR 493
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + + AA+ ++++ V ++ NI+I+ LC + + +
Sbjct: 120 YGALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQMI 179
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P TL++++ G C+ + A M PN YTF +I+ CK G +
Sbjct: 180 LKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIK 239
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M++ EP V YN +MDG
Sbjct: 240 EAKNVIAVMMKEGVEPTVVTYNTLMDG 266
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + + + + K A++ K H P+ T + +I+ LC R + +
Sbjct: 290 PNVHSYTIIINGLCKIKMVDEALNFFKEMHCE---PNTVTYSSLIDALCKSGRISHAWEL 346
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + G T N++++ LC + V A+ + +++ G QPN T+ +I+G CK
Sbjct: 347 LDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCK 406
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G E+A + ++++ + + YN +++G
Sbjct: 407 EGRLENAQVIFQDLLIKGYKVKVWTYNTMING 438
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 37/201 (18%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A++ FHQ+ P + N L A S+ + G P T + +IN
Sbjct: 31 AISLFHQLELNRITPTIVTLNILINCYGHLGEITFAFSIFAKILKLGYHPTTITFSTLIN 90
Query: 109 CLC--------------------HLRRTAFGLSVLGLVFKTG--------LRPTTATL-- 138
+C HL + ++G + GL K G LR L
Sbjct: 91 GMCLKGKLKEALHFHDDVIGLGFHLDQVSYGALISGLC-KIGETRAALKMLRQIEGKLVN 149
Query: 139 ------NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
N I++ LC E V A M PN T ++I GFC +G + A
Sbjct: 150 TNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGL 209
Query: 193 MRNMVERHCEPNAVVYNAIMD 213
M+ ++ PN + ++D
Sbjct: 210 FHEMLLKNINPNIYTFTILID 230
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 89/154 (57%)
Query: 60 NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFG 119
NP P + FN + + + + KH++ A+SL ++ +G+ D +T NI+INC L +
Sbjct: 65 NPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLS 124
Query: 120 LSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
SV G + K G P T NT++ GLCL+ ++ A+ F + G+ + ++G +ING
Sbjct: 125 FSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLING 184
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
CK+G +A+ ++ + + +PNAV+YN I+D
Sbjct: 185 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIID 218
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K +D AV F +M P V +NSL + + + + L+ H G
Sbjct: 356 MINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRG 415
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T N +++ LC +++L + G+RP T ++ GLC + A
Sbjct: 416 QPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQ 475
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + YT+ +I GFC G ++A+ + M + C PNA Y ++
Sbjct: 476 KVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVI 532
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDF--NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
K ++ A + QM+A P DF NSL A+ L+ + + P +Y
Sbjct: 224 KLVNDAFDLYSQMVAKRISP--DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMY 281
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T +I+++ C + +LG+ K + T N++++G CL + A M
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSM 341
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G N ++ +ING CKI + AV M R PN V YN+++DG
Sbjct: 342 ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDG 394
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 1/163 (0%)
Query: 53 FHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FH + A F + + +L + + AA+ L+KR V P+ N++I+ +C
Sbjct: 162 FHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMC 221
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ + + + P T N+++ G C+ + AV M P Y
Sbjct: 222 KAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMY 281
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +++ FCK G + A + + +++ + V YN++MDG
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDG 324
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 81/172 (47%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A F M + V+ + ++ + + K A++L + + P++ T
Sbjct: 328 VKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVT 387
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I+ L L + + L ++ + G P T N+I++ LC ++V A+ +++
Sbjct: 388 YNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLK 447
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G +P+ YT+ +I G C+ G E A +++ + + Y ++ G
Sbjct: 448 DQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQG 499
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L AV H+M+ N P + F+ L + A ++ + D+ T N
Sbjct: 261 LKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNS 320
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C ++ + + G+ + T++NGLC V AV M
Sbjct: 321 LMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRK 380
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN T+ ++I+G K+G + + M +R PN + YN+I+D
Sbjct: 381 IIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILD 428
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 69/164 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L + + +M P + +NS+ + + H AI+L+ G
Sbjct: 391 LIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQG 450
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT ++I LC + V + G T ++ G C++ +A+
Sbjct: 451 IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
ME+ G PN+ T+ +I + + + A +R M+ R
Sbjct: 511 ALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIAR 554
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 84/159 (52%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
ML P P + F + + +TKHY I L +R G+ + TLNI+IN CHLR+
Sbjct: 1 MLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQ 60
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
SV + K G +P T T++ GLCL V ++ F + + G + + ++G
Sbjct: 61 INSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGT 120
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ING CKIG T A+ +R + C P+ V+YN I+DG
Sbjct: 121 LINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDG 159
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ + +K LD A+ F M N P V ++SL + ++ +A+ + H G
Sbjct: 296 MISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRG 355
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ T +I+ LC + +++L + G++ T N +V+GLC + + A
Sbjct: 356 QPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQ 415
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + G+ + T+ +ING CK + A+ + M ++ C P+A+ Y I++
Sbjct: 416 KVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIIN 473
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+NS L+ +++A + F ++L P + + +L + +++ R S G
Sbjct: 51 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 110
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D + +IN LC + +T L +L + RP NTI++GLC + V A
Sbjct: 111 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 170
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M PN T+ ++I GFC +G + A + MV ++ PN +N ++DG
Sbjct: 171 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 229
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+++A+ + +M P V + SL + ++ AI+L+K+ G+ ++YT NI
Sbjct: 341 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 400
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC R V + G T + ++NGLC E+ A+T ME+ G
Sbjct: 401 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 460
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH 200
P++ + IIN F + + A +R M+ R
Sbjct: 461 CVPDAIAYETIINAFFEKDMNDKAEKLLREMIARR 495
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A ++M+ N P V FN+L + + A SL+ GV PD++T N
Sbjct: 201 LDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNA 260
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ ++ +V ++ + G+ + + +++GL + A+ M N
Sbjct: 261 LMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN 320
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ + ++I+G CK G SA+ + M +R PN + Y +++D
Sbjct: 321 VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLID 368
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 72/150 (48%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V ++ + + +++ K A+ L + + V PD+ + +I+ LC R L +
Sbjct: 290 VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVD 349
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G P T ++++ LC + V A+ + +++ G Q N YT+ +++G CK G
Sbjct: 350 EMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDG 409
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A ++++ + + V Y+ +++G
Sbjct: 410 RLTDAQKVFQDLLMKGHNVDVVTYSIMING 439
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 71/171 (41%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K + A + +M FP V + SL A L+ V P++ T
Sbjct: 164 KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTF 223
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +++ LC + S++ ++ K G+ P T N +++G L A M
Sbjct: 224 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 283
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + +++ +I+G K+ + A+ M + P+ V Y++++DG
Sbjct: 284 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDG 334
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +N++ + + K A L V P++ T +I C + + +
Sbjct: 148 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 207
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
L + + P T NT+V+GLC E + A + M G P+ +T+ A+++G+
Sbjct: 208 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY 265
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
+ V+ F+++L NP P + +F + + + Y AISL + +G+A D+ T NI+I
Sbjct: 39 SLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILI 98
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
NC L T F SV + K G P TL T++ GLCL+ + A+ F + G+
Sbjct: 99 NCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFH 158
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N +G +ING CK+G T +A+ +R + + +PN V+YN I+D
Sbjct: 159 LNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIID 204
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ +K ++ A + +M++ P V +++L + AI L + S
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT +I+++ C R +VL ++ K G++P T ++++G CL V A
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G N ++ +INGFCKI + A+ + M ++ P+ V YN+++DG
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDG 380
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M N P V +NSL + ++ + A+ L+ H G
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V D T N +++ LC + +++L + G++P T +++GLC + A
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY YT+ +I GFC + A+ + M + C PNA Y I+
Sbjct: 462 NIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M V+ +N + + K A++L K H + PD+ T
Sbjct: 314 VKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I+ LC + ++ L ++ + G+ T N+I++ LC + V A+ M+
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 433
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G QP+ YT+ +I+G CK G + A +++ + Y ++ G
Sbjct: 434 DEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 53 FHQMLAANPFPCVKD-FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FH + A F K + +L + + +AA+ L++R V P++ N +I+ +C
Sbjct: 148 FHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC 207
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
++ + + G+ P T + +++G C+ + A+ M + P+ Y
Sbjct: 208 KVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVY 267
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +++GFCK G + A + M+++ +P+ V Y ++MDG
Sbjct: 268 TFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDG 310
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V + SL K A S+ GV ++ + NI+IN C +++
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKK 351
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+++ + + P T N++++GLC ++ A+ M + G + T+ +
Sbjct: 352 VDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++ CK + A+ + M + +P+ Y ++DG
Sbjct: 412 ILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS+ + + AI+L+ + G+ PD+YT I+I+ LC R ++ +
Sbjct: 409 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLL 468
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T T ++ G C + A+ ME+ G PN+ T+ II + + +
Sbjct: 469 VKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDEND 528
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 529 MAEKLLREMIAR 540
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHSSGVAPDIYTLN 104
+D AV F++ML P + +FN + T++ +TK HY +SL + S GV PD++TL+
Sbjct: 151 VDNAVLSFNRMLQMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 210
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+INC FK G P T TL T++ GLCL V A+ F H+
Sbjct: 211 ILINCY---------------YFKMGYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLAL 255
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ N T+G +ING CK+G T +A+ +R + + N V+Y+ ++DG
Sbjct: 256 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDG 305
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A QM P V +NSL + + H AI+L+ G+ PD++T N
Sbjct: 411 LSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNT 470
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC R + + G T T N ++NGLCLE + A T ME+ G
Sbjct: 471 LVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNG 530
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
P+ T+ II+ + + + A +R ++ R
Sbjct: 531 CIPDVVTYQTIIHALFEKDENDKAEKLVRELIVR 564
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K +D A+ F +M P +N+L ++ + A L+ + G P++ T
Sbjct: 376 IKMVDEALNLFTEMHCK---PNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVIT 432
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +++ LC ++++ G++P T NT+V+GLC + + A + +
Sbjct: 433 YNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLL 492
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
GY ++T+ +ING C G + A + M + C P+ V Y I+
Sbjct: 493 IKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTII 542
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV--------APD 99
A + FH+M+ N P V FN L + + A ++I + + P+
Sbjct: 335 KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPN 394
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+ N +I+ C R + +L + G P T N++++ LC ++V A+
Sbjct: 395 TVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVN 454
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ G QP+ +T+ +++G CK G + A L ++++ + YN +++G
Sbjct: 455 NFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMING 509
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 117 bits (292), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 94/175 (53%)
Query: 39 SIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAP 98
+ S +D AV+ F+++L N P +FN + + ++KHY + L ++ G+ P
Sbjct: 59 TFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 118
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
++ NI+INC C L F SV + K G P T T T++ GLCL+ + A F
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFH 178
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ G+ + ++G +I+G CK+G+T +A+ ++ + +PN V+YN I+D
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIID 233
Score = 96.3 bits (238), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 92/179 (51%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ +K ++ A F +M++ P V +++L + AI L +
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI++N C + G +V ++ K G++P T N++++G CL V A
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G P+ ++ +INGFCKI + A+ + M ++ P+ V Y++++DG
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409
Score = 81.3 bits (199), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K D A+ F +M N P V ++SL ++++ + A+ L+ + H G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P I T N +++ LC + + +++L + G++P T + ++ GLC + A
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G+ N T+ +I GFC G A+ + M + C P+A Y I+
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547
Score = 81.3 bits (199), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 83/172 (48%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M P ++ ++ + + K + A++L K H + PD+ T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+ +I+ L R ++ L ++ + G+ PT T N+I++ LC + V A+ ++
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLK 462
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G QPN YT+ +I G C+ G E A ++ + N Y ++ G
Sbjct: 463 DKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQG 514
Score = 77.0 bits (188), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 71/147 (48%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + AA+ L++R + V P++ N +I+ +C ++ + +
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI 252
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T + +++G C+ + A+ M +P+ YTF ++N FCK G +
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+++ +PN V YN++MDG
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDG 339
Score = 70.9 bits (172), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 74/162 (45%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P +NSL K A S+ GV PDI + +I+IN C
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+++ +++ + + + P T +++++GL ++ A+ M + G P T
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRT 437
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +I++ CKI + A+ + + ++ +PN Y+ ++ G
Sbjct: 438 YNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 116 bits (290), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAH-SSGVAPDIYTLNIVI 107
A + F++ML +P P + FN + + ++ HY + L ++ + GV P++ T NI++
Sbjct: 51 ASSLFNRMLHMHPAPPISQFNKILASLVKSNHYPTVVLLCRKMELNDGVKPNLVTFNILL 110
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
NC HL + +F SVL + K G P T NT++NG CL+ + F + G+Q
Sbjct: 111 NCYSHLGQMSFAFSVLAKIIKIGYHPDVVTFNTLINGYCLKGENDELLRFYDKVVGLGFQ 170
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N ++G +IN CK G+T A+ +R + + +P+ V+YN ++D
Sbjct: 171 LNQISYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLID 216
Score = 87.0 bits (214), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 81/171 (47%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A +++MLA P V +N+L + AISL K S + P +YT
Sbjct: 222 KLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTF 281
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C + VL ++ K G++ T +T++ G C+ + AV M
Sbjct: 282 NILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMIL 341
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN YTF +++ FCK + A + M+E+ PN + Y+ ++ G
Sbjct: 342 GKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYG 392
Score = 75.9 bits (185), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ +K +D A F +M + FP V ++SL + +++ A+ L+ H G
Sbjct: 424 MISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVDEMHDRG 483
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA- 154
P+I+T + +++ L + + + G++P T ++GLC + A
Sbjct: 484 QPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFIDGLCKNGRLEDAW 543
Query: 155 VTFTRHMENA-GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
F + N+ + N YT+ +I+GFC+ G + A+ + NM + C P+ V Y I+
Sbjct: 544 EVFEDLLVNSYNHNRNKYTWTVMIHGFCRKGLFDEALTLLSNMKDNSCIPDTVTYKTII 602
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 69/152 (45%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +N L + + K A L + ++P++ T N +++ LC + + +S+
Sbjct: 206 PHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISL 265
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
++ + PT T N +V+G C E V A M AG + N+ T+ +I GFC
Sbjct: 266 FKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCI 325
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+G + AV M+ PN + ++D
Sbjct: 326 VGKLKEAVDLFNKMILGKVNPNVYTFTILVDA 357
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Query: 72 FTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGL 131
F V + K A+ L + V P++YT I+++ C + VL ++ + +
Sbjct: 323 FCIVGKLKE---AVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDV 379
Query: 132 RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVL 191
P T + ++ G CL N V A + M G + ++ +I+ FCKI + A
Sbjct: 380 TPNVITYSCLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARK 439
Query: 192 CMRNMVERHCEPNAVVYNAIMDG 214
M + P+ V Y++++DG
Sbjct: 440 LFEEMQSKQIFPDVVTYSSLVDG 462
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ + +D A + M+ + P V ++ L A + K G
Sbjct: 354 LVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYGYCLVNEVNEAKRIFKSMTQRG 413
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V D+ + I+I+ C ++ + + + P T +++V+GLC + +A+
Sbjct: 414 VTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNAL 473
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G PN +T+ +I++ K E A+ + ++ +PN Y +DG
Sbjct: 474 KLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFIDG 532
Score = 57.8 bits (138), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 58/125 (46%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V + + + + K A L + S + PD+ T + +++ LC R L ++
Sbjct: 418 VLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVD 477
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G P T ++I++ L ++ V A+ + ++ G QPN YT+ I+G CK G
Sbjct: 478 EMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFIDGLCKNG 537
Query: 185 DTESA 189
E A
Sbjct: 538 RLEDA 542
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 50 VAFFHQML-AANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
V+ F+++L NP P + F + + ++ HY+ +SL ++ +G+ D+ L+I+IN
Sbjct: 56 VSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILIN 115
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C L + SVL + K G P TL T++ GLCL+ + A+ F + G+
Sbjct: 116 CFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHL 175
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N ++G +ING CK+G T +A+ +R + + +PN V+YN I+D
Sbjct: 176 NKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIID 220
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ +K ++ A + +M++ P V +N+L + A L +
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++YT NI+++ C RR +VL ++ K G++P T N++++ CL V A
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE---PNAVVYNAIM 212
+ G PN +++ +I+GFCKI + A+ + M HC P+ V YN+++
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM---HCNNIIPDVVTYNSLI 394
Query: 213 DG 214
DG
Sbjct: 395 DG 396
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
+K +D A+ F +M N P V +NSL + + + A+ L+ H GV D
Sbjct: 364 KIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKI 423
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T N +++ LC + +++L + G++P T T+V+GLC + A +
Sbjct: 424 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDL 483
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
GY + + A+I GFC G + ++ + M E C PNAV Y I+
Sbjct: 484 LVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A F+ + P + ++ + + K A++L K H + + PD+ T
Sbjct: 330 VKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVT 389
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I+ LC L + ++ L ++ + G+ T N+I++ LC + V A+ M+
Sbjct: 390 YNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 449
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G QP+ T+ +++G CK G E A + +++ + + +Y A++ G
Sbjct: 450 DEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQG 501
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 53 FHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
FH + A F K + +L + + +AA+ L++R V P++ N +I+ +C
Sbjct: 164 FHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC 223
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
++ + + G+ P T N +++G C+ + A M PN Y
Sbjct: 224 KVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVY 283
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
TF +++GFCK + A + M+++ +P+ YN++MD
Sbjct: 284 TFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A F++M+ N P V FN L + + A +++ G+ PD++T N
Sbjct: 263 MKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNS 322
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C ++ + + + G+ P + + +++G C V A+ + M
Sbjct: 323 LMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN 382
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ ++I+G CK+G A+ + M +R + + YN+I+D
Sbjct: 383 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 75/171 (43%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ L A M+ P V +NSL K A + GV P+I++
Sbjct: 296 RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY 355
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+I+ C +++ +++ + + P T N++++GLC ++ A+ M +
Sbjct: 356 SIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 415
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + T+ +I++ CK + A+ + M + +P+ Y ++DG
Sbjct: 416 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+++L N P +FN + + ++KHY + L ++ G+ P++ NI
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+INC C L F SV + K G P T T T+ GLCL+ + A F + G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + ++G +I+G CK+G+T +A+ ++ + +PN V+YN I+D
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIID 233
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 92/179 (51%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ +K ++ A F +M++ P V +++L + AI L +
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI++N C + G +V ++ K G++P T N++++G CL V A
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G P+ ++ +INGFCKI + A+ + M ++ P+ V Y++++DG
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K D A+ F +M N P V ++SL ++++ + A+ L+ + H G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+I T N +++ LC + +++L G +P +T + ++ GLC + A
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + Y + +I GFC G A+ + M + C P+A Y I+
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
AA+ L++R + V P++ N +I+ +C ++ + + G+ P T + ++
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+G C+ + A+ M +P+ YTF ++N FCK G + M+++ +
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 203 PNAVVYNAIMDG 214
PN V YN++MDG
Sbjct: 328 PNFVTYNSLMDG 339
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 82/172 (47%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M P ++ ++ + + K + A++L K H + PD+ T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+ +I+ L R ++ L ++ + G+ P T N+I++ LC + V A+ +
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFK 462
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G+QP+ T+ +I G C+ G E A +++ + + Y ++ G
Sbjct: 463 DKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQG 514
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P +NSL K A S+ GV PDI + +I+IN C
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+++ +++ + + + P T +++++GL ++ A+ M + G PN T
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICT 437
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +I++ CK + A+ + ++ +P+ Y+ ++ G
Sbjct: 438 YNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHSSGVAPDIYTLN 104
+D AV F++M P + +FN + T++ +TK HY +SL + S GV PD++TL+
Sbjct: 47 VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+INC CHL + F SV + K GL CL V A+ F H+
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKMGL--------------CLNGKVNEALLFHDHVLAL 152
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ N T+G +ING CK+G T +A+ +R + + N V+Y+ I+DG
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDG 202
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K + A + +M+ P V F+SL + A L + PD YT
Sbjct: 207 KLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTF 266
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ LC + +V+ ++ K G+ PT T NT+++G CL N V A +
Sbjct: 267 NILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISR 326
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PNS ++ +INGFCKI + A+ M R P+ V YN+++DG
Sbjct: 327 MRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDG 377
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ FH+M P +NSL + + A L+ H++
Sbjct: 339 MINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNC 398
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ DI T N +I+ C + ++++ + + G++P T N +++GLC + +A
Sbjct: 399 IPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQ 458
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + GY N++T+ +ING CK G + A + + M + P+AV Y I+
Sbjct: 459 DVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQA 517
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + +H AI+L+K+ G+ P++ T NI+I+ LC + V +
Sbjct: 406 YNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLL 465
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G T N ++NGLC E A ME+ G P++ T+ II + E
Sbjct: 466 IKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENE 525
Query: 188 SAVLCMRNMV 197
A +R MV
Sbjct: 526 KAQKLLREMV 535
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 56 MLAANPFPCVKDFNSLF------TFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINC 109
M+ P V +N+L V + KH + IS ++ VAP+ + NI+IN
Sbjct: 289 MMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR------VAPNSRSYNIMING 342
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
C ++ L + + G+ P T N++++GLC + A M N +
Sbjct: 343 FCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPAD 402
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ ++I+ FCK + A+ ++ + E +PN YN ++DG
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDG 447
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N + + K A+ L G+AP T N +I+ LC R + +
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWEL 390
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + + T N++++ C +V A+ + ++ G QPN T+ +I+G CK
Sbjct: 391 VDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCK 450
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G ++A ++++ + NA YN +++G
Sbjct: 451 GGQLKNAQDVFQDLLIKGYNVNAWTYNIMING 482
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 50 VAFFHQMLA-ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
++ F+++L NP P + FN + + + + Y +SL + +G+A D+ T +I+IN
Sbjct: 52 ISSFNRLLHHKNPTPHIIQFNKILSSLVKLNQYPTVVSLHPQMELNGIASDLVTCSILIN 111
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C L F SVL + K G P T T T++ GLCL+ ++ A+ F + G+
Sbjct: 112 SFCQLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHL 171
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++G +ING CK+G+T +A+ +R + +P+ V+YN I+DG
Sbjct: 172 DQVSYGTLINGLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDG 217
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 86/177 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M FP V +++L + ++ + A+ L+ + H G
Sbjct: 343 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRG 402
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
VAP+I T N +++ LC + +++L G++P+ T +++GLC + A
Sbjct: 403 VAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDAR 462
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY T+ +I GFC G + ++ + M E C P+AV Y I+
Sbjct: 463 NIFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGCIPDAVTYEIII 519
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN------------------ 104
P V +N++ + + KH A L + ++P++ T +
Sbjct: 206 PDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDF 265
Query: 105 ------IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
I+++ C R +VL ++ K G++P T +++++G CL N V A +
Sbjct: 266 FNKMIFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIF 325
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G N+ ++ +INGFCKI + A+ + M + P+ + Y+A++DG
Sbjct: 326 NTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDG 381
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 54 HQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
H+ + AN K ++ + + K A+ L K H + PD+ T + +I+ LC
Sbjct: 330 HRGVTAN----AKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKS 385
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
R ++ L ++ + G+ P T N+I++ LC + V A+ ++ G QP+ YT+
Sbjct: 386 GRISYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTY 445
Query: 174 GAIINGFCKIGDTESAVLCMRNMVE 198
+I+G CK G + A RN+ E
Sbjct: 446 TILIDGLCKGGRLKDA----RNIFE 466
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A FF++M+ F V F R K ++++ + G+ PD+ T +
Sbjct: 259 LKDAFDFFNKMI----FILVDGFCK----EGRVKEAKNVLAMMMK---QGIKPDVVTYSS 307
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + S+ + G+ + + ++NG C V A+ + M +
Sbjct: 308 LMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQ 367
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ A+I+G CK G A+ + M +R PN V YN+I+D
Sbjct: 368 IFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILDA 416
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 67/159 (42%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V ++SL A S+ GV + + +I+IN C ++
Sbjct: 293 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKM 352
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ + + + P T + +++GLC ++ A+ M + G PN T+ +
Sbjct: 353 VDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNS 412
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++ CK + A+ + ++ +P+ Y ++DG
Sbjct: 413 ILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDG 451
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ QM P + +NS+ + +T AI+L+ + G+ P +YT I+I+
Sbjct: 391 ALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILID 450
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R ++ + G T T ++ G C + ++ ME G P
Sbjct: 451 GLCKGGRLKDARNIFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGCIP 510
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
++ T+ II + A +R M+ R
Sbjct: 511 DAVTYEIIICSLFDKDKNDKAEKLLREMITR 541
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 28/205 (13%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+NS L + A + ++L P F +L + A+ + + G
Sbjct: 109 LINSFCQLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMG 168
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D + +IN LC + T L +L ++P NTI++G+C + +V A
Sbjct: 169 FHLDQVSYGTLINGLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDAF 228
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA-------------------------- 189
M PN T+ A+I+GFC +G + A
Sbjct: 229 DLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDFFNKMIFILVDGFCKEGRVKEAKN 288
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
VL M M+++ +P+ V Y+++MDG
Sbjct: 289 VLAM--MMKQGIKPDVVTYSSLMDG 311
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+++L NP P +FN + + ++KHY + L ++ G+ P++ NI
Sbjct: 43 VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV----------ASAV 155
+IN C L SVL + K G +P T TLNT++ GLCL + AV
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M P+ YTF +++GFCK G + A + M+ + +P V YN++MDG
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A + F+ M P ++ ++ L + K A+ L+K H
Sbjct: 218 LMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T + +I+ LC + ++ L ++ + G P T ++I++ LC + V +A+
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAI 337
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+N G QPN YT+ +I G C+ G E A +++ + N Y ++ G
Sbjct: 338 ALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQG 396
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +K +D A+ +M P V ++SL + ++ + A+ L+ H G
Sbjct: 253 LINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T + +++ LC + +++L + G++P T ++ GLC + A
Sbjct: 313 QPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDAR 372
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G+ N YT+ +I GFC G + A+ + M + C PNA Y I+
Sbjct: 373 KVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ L + + PD+YT I+++ C R +VL ++ G++P T N++++
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G L V A + M G P+ ++ +INGFCKI + A+ ++ M + P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280
Query: 204 NAVVYNAIMDG 214
N V Y++++DG
Sbjct: 281 NVVTYSSLIDG 291
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +NSL K A S+ GV+PDI + +I+IN C ++ + +
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMEL 269
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + P T +++++GLC ++ A+ M + G PN T+ +I++ CK
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++A+ + M + +PN Y ++ G
Sbjct: 330 NHQVDNAIALLTQMKNQGIQPNMYTYTILIKG 361
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L AV F++M+ N P V F L + A +++ G+ P + T N
Sbjct: 158 LKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNS 217
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ +++ S+ + + G+ P + + ++NG C + A+ + M +
Sbjct: 218 LMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN T+ ++I+G CK G A+ + M +R PN V Y++I+D
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 93/165 (56%)
Query: 50 VAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINC 109
++ F+++ P P + F + +A + Y+ A+S ++ H G+ PD++T N++INC
Sbjct: 48 ISRFNRLTNQIPTPPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINC 107
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
L T F S+ + K G P T NT++NGLCL+ V A+ F + +Q +
Sbjct: 108 FSQLGHTHFAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVHKALNFFEKLVVLKFQLD 167
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ +ING CK+G+T +A+ ++ + E+ + + V+Y AI++G
Sbjct: 168 RVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIING 212
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
++N + K +D A + +M+A P V +N++ F V R K AI L
Sbjct: 209 IINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKD---AIGLFNDMK 265
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
V D YT N +++ C G +V+ ++ K G++P T N++++G CL V
Sbjct: 266 LENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVD 325
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE---PNAVVYN 209
A M G N ++ +INGFCK+ + A M E HC+ P+ + Y+
Sbjct: 326 KAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEA---MNLFQEMHCKEIIPDTIAYS 382
Query: 210 AIMDG 214
+++DG
Sbjct: 383 SLIDG 387
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K +D A F+ M+ V+ ++ + + K A++L + H + PD
Sbjct: 321 VKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIA 380
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+ +I+ C R L ++ + G P T N+I+ LC ++V + R ++
Sbjct: 381 YSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIK 440
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESA 189
G QP++YT+ + NG K G E A
Sbjct: 441 VKGIQPDAYTYTILTNGLFKDGRLEEA 467
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 69/159 (43%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P + +NSL K A ++ GV ++ + +I+IN C ++
Sbjct: 299 MMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKM 358
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+++ + + P T +++++G C + A+ M + G PN T+ +
Sbjct: 359 MDEAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNS 418
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I+ CKI E + +R + + +P+A Y + +G
Sbjct: 419 ILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNG 457
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L A + F +L P + FN+L + A++ ++
Sbjct: 104 LINCFSQLGHTHFAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVHKALNFFEKLVVLK 163
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D + +IN LC + T L +L V + ++ I+NGLC + V A
Sbjct: 164 FQLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAF 223
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M P+ +T+ A+I GFC +G + A+ +M + E + +N ++
Sbjct: 224 DLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLV 280
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 52 FFHQML-AANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
F+++L NP P +F + + + K Y A+SL ++ +G+ PD T N+++NC
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
L F SV + K G P T ++ GLCL+ V A+ F + G+Q +
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++G +ING C++G+T++AV +R + + PN V+Y+ I+D
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIID 206
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M FP V +NSL + ++ + A+ L+ H G
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+I T N +++ +C + +L + + G++P T ++NGLC + A
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY PN YT+ ++INGFC G + + + M + C PNA+ Y ++
Sbjct: 464 KVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILI 520
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
+++S+ K ++ A + +M++ P V ++SL F V + K+ A+ L R
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKY---AVDLFNRMI 260
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
S + P++YT +I+I+ C + +VL ++ K ++ T N++++G CL V
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE---PNAVVYN 209
A + M G P+ +++ +INGFCKI + A M+ E HC+ PN V YN
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEA---MKLFEEMHCKQIFPNVVTYN 377
Query: 210 AIMDG 214
+++DG
Sbjct: 378 SLVDG 382
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M P V ++ + + K A+ L + H + P++ T
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +++ LC RT+ L ++ + G T N+I++ +C N+V A+ ++
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G QP+ +T+ +ING CK+G + A +++ + PN Y ++++G
Sbjct: 436 EKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLING 487
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L AV F++M++ N P V F+ L + A +++ V D+ T N
Sbjct: 249 LKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNS 308
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C +++ S+ ++ + G+ P + + ++NG C V A+ M
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ 368
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN T+ ++++G CK G T A+ + M +R N + YN+I+D
Sbjct: 369 IFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILD 416
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS+ + + H AI L+ + G+ PDI+T ++IN LC + R V +
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL 470
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G P T +++NG C + + M++ G PN+ T+ +I+ + + +
Sbjct: 471 VKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDEND 530
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 531 KAEKLLREMIAR 542
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L + + + F ++L P F L + A+ + + G
Sbjct: 99 LMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D + +IN LC + T + +L V +RP +TI++ +C + V A
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + P+ T+ ++I+GFC +G + AV M+ + PN ++ ++DG
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 76/179 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + AAV ++ P V ++++ + + K A L S
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD+ T + +I+ C + + + + + + + P T + +++G C E V A
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + + T+ ++++G+C + A M +R P+ Y+ +++G
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+F H + NP P + F + + + HY+ +SL ++ +G+A ++ TL+I+INC
Sbjct: 55 SFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCF 114
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
L + SV + K G P TL T++ GLCL+ ++ A+ F + G+Q N
Sbjct: 115 SQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQ 174
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ +ING CK+G T++A+ +R + + + V+YN I+DG
Sbjct: 175 VSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDG 218
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A F+ +M+A P V +N+L + AI L+ + + P +YT
Sbjct: 223 KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTF 282
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+++ C + +V ++ K ++P T N+++NG CL N V A + M
Sbjct: 283 SILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ 342
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE---PNAVVYNAIMDG 214
G P+ +++ +I+GFCKI + A M+ E HC+ P+ V YN+++DG
Sbjct: 343 IGVAPDVHSYSIMISGFCKIKMVDEA---MKLFEEMHCKQIFPDVVTYNSLIDG 393
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
+K +D A+ F +M FP V +NSL + ++ + A+ LI H G P+I
Sbjct: 361 KIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNII 420
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T N +++ LC + +L + ++P+ T N ++NGLC + A +
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDV 480
Query: 162 ENAGYQPNSYTFGAIINGFCKIG 184
GY + YT+ +I GFCK G
Sbjct: 481 LVNGYNIDVYTYNTMIKGFCKKG 503
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + ++ A + F+ M P V ++ + + + K A+ L + H
Sbjct: 320 LMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQ 379
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N +I+ LC R ++ L ++G + G P T N++++ LC ++V A+
Sbjct: 380 IFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAI 439
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ QP+ T+ +ING CK G + A +++ + YN ++ G
Sbjct: 440 ELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKG 498
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 61/147 (41%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ V + K A + + P + T N +I LC + + + +L +
Sbjct: 212 YNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI 271
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ PT T + +V+ C E V A M +PN T+ +++NG+C + +
Sbjct: 272 LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVN 331
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A M + P+ Y+ ++ G
Sbjct: 332 KAESIFNTMAQIGVAPDVHSYSIMISG 358
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 39/146 (26%)
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM---- 161
+IN LC + +T L +L + +R NTI++G+C + V A F M
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239
Query: 162 ---------------------------------ENAGYQPNSYTFGAIINGFCKIGDTES 188
EN P YTF +++ FCK G +
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENI--NPTVYTFSILVDAFCKEGKVKE 297
Query: 189 AVLCMRNMVERHCEPNAVVYNAIMDG 214
A M+++ +PN V YN++M+G
Sbjct: 298 AKNVFVVMMKKDVKPNIVTYNSLMNG 323
>Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30119546-30118699 | 20130731
Length = 261
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+ +L N P + + + ++KHY +SL ++ G+ D+ +I
Sbjct: 47 VDNAVSMFNHLLHKNTTPPDIKLGKILSSLVKSKHYHNVVSLSQKMEFEGIKLDLVNCSI 106
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN C L F SVL + K G P T T T++ GLCL+ ++ A+ F + G
Sbjct: 107 LINSFCQLGHNPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMG 166
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNM---------------VERHCE---PNAVV 207
+ + +G +ING CK+G+T++A+ +R + E HC P+ V
Sbjct: 167 FHLDKVGYGTLINGLCKVGETKAALELLRRVDGKLIKKVDEAINLFEEMHCRKLIPDVVT 226
Query: 208 YNAIMDG 214
YN+++DG
Sbjct: 227 YNSLIDG 233
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 89/162 (54%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
F+ +L N P +F + + ++KHY +SL ++ G+ D+ +I+IN C
Sbjct: 1 MFNHLLHKNSTPPDIEFGKILGSLVKSKHYHNVVSLSQKMEFEGIKLDLVNCSILINSFC 60
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
L F SVL + K G P T T T++ GLCL+ ++ A+ F + G+ +
Sbjct: 61 QLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQV 120
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++G +ING CK+G+T +A+ +R + + + +AV+Y++I+D
Sbjct: 121 SYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIID 162
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M FP V +++L + ++ + A+ L+ H G
Sbjct: 300 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRG 359
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T N +++ LC +++L + G+RP T +V GLC + A
Sbjct: 360 QQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDAR 419
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + Y + +I GFC G + A+ + M E C P+A Y I+
Sbjct: 420 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 476
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K ++ A + +M A P V +++L + AI L +
Sbjct: 160 IIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILEN 219
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++YT +I+++ C R +VL ++ K G++P T +++++G CL N V A
Sbjct: 220 INPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAE 279
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G N ++ +INGFCKI + A+ + M + P+ + Y+A++DG
Sbjct: 280 SIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDG 338
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 54 HQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
H+ + AN V+ ++ + + K A+ L K H + PD+ T + +I+ LC
Sbjct: 287 HRGVTAN----VQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKS 342
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
R ++ L ++ + G +P T N+I++ LC +++V A+ ++ G +P+ T+
Sbjct: 343 GRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTY 402
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ G C+ G E A +++ + + Y ++ G
Sbjct: 403 TILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQG 443
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 65/147 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
++S+ + + KH A L + ++P++ T + +I+ C + + + + +
Sbjct: 157 YSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMI 216
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T + +V+G C E V A M G +P+ T+ ++++G+C + +
Sbjct: 217 LENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 276
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A M R N Y+ +++G
Sbjct: 277 KAESIFNTMSHRGVTANVQSYSIMING 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 67/159 (42%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V ++SL A S+ GV ++ + +I+IN C ++
Sbjct: 250 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKM 309
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ + + + P T + +++GLC ++ A+ M + G QP+ T+ +
Sbjct: 310 VDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNS 369
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++ CK + A+ + + + P+ Y ++ G
Sbjct: 370 ILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKG 408
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+NS L + A + ++L P F +L + A+ + + G
Sbjct: 55 LINSFCQLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMG 114
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D + +IN LC + T L +L V ++ ++I++ +C + +V A
Sbjct: 115 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAF 174
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M PN T+ A+I+GFC +G + A+ M+ + PN ++ ++DG
Sbjct: 175 DLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDG 233
>Medtr0086s0070.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0086:32654-31850 | 20130731
Length = 167
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 1/159 (0%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
ML + +F + + + +TK HY +SL ++ +G+ PD+ LNI INC CHL
Sbjct: 1 MLRMRHTTTIVEFTRILSSIVKTKNHYTTVLSLSRQMEFNGIIPDLLMLNISINCYCHLH 60
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
+ F SV +FK G PTT TL T++NGLCL V A+ F H+ G++ N ++G
Sbjct: 61 QMNFAFSVNTKIFKIGYLPTTVTLTTLINGLCLNGKVQEALNFHDHVIARGFRLNEVSYG 120
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ING CK+G+T +A+ ++ + + + N V+Y+ ++D
Sbjct: 121 TLINGLCKMGETRAALQMLKRIEGKLVDTNVVMYSTVID 159
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
ML +P P + FN + + + HY AISL ++ +G+ P I TL I++NC CH
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
F S+L + K G P + T T++ G+CL A+ F H+ G++ + ++
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++NG CK+G+T +A+ +R + + V+Y+ I+D
Sbjct: 121 LMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIID 155
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
++++ + + K A L + G+ P++YT +I+++ LC R+ +++L ++
Sbjct: 150 YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMM 209
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K G++P T I++G CL N V A+ M G +PN + + IING CK +
Sbjct: 210 KKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVD 269
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ + M + P+ V YN ++DG
Sbjct: 270 EAMNLFKEMHWKKINPDVVTYNILIDG 296
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ F+ M+ P V +N + + + K A++L K H + PD+ T NI
Sbjct: 233 VNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNI 292
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC L + + L ++ + G T N++++ LC +++ A+T + +++ G
Sbjct: 293 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 352
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
QPN T+ +I+G CK G E A + + ++ YN +++G
Sbjct: 353 IQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMING 401
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D A+ F +M P V +N L + + + ++ L+ S G
Sbjct: 258 IINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIG 317
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
DI T N +++ LC ++++ + G++P T T+++GLC + + A
Sbjct: 318 KTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAY 377
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY +T+ +ING CK G + A+ + M + C P+AV Y I+
Sbjct: 378 VIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETII 434
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 85/177 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+A FP V F+ L + + + A++L+ G
Sbjct: 153 IIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKG 212
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++ T +++ C + + L++ ++ + G+ P N I+NGLC + V A+
Sbjct: 213 VKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAM 272
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M P+ T+ +I+G CK+G +++ + M + + YN+++
Sbjct: 273 NLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLL 329
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 75/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ M+ P V + ++ A+++ GV P+++ NI+IN
Sbjct: 201 AMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIIN 260
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC +R +++ + + P T N +++GLC +++++ M + G
Sbjct: 261 GLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTV 320
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ ++++ CK + A+ ++ + ++ +PN Y ++DG
Sbjct: 321 DIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDG 366
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 66/151 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L + ++ +M + + +NSL + + H AI+L+K G
Sbjct: 293 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 352
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T +I+ LC R + + G T T N ++NGLC + A+
Sbjct: 353 IQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEAL 412
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
ME+ P++ ++ II + G+T
Sbjct: 413 ALLSRMEDNACIPDAVSYETIIYALSEKGET 443
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G D + I++N LC + T + +L KT + +TI++ LC V A
Sbjct: 110 GFKLDQVSYAILMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDA 166
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G PN YTF +++ CK + A+ + M+++ +PN V Y AIMDG
Sbjct: 167 YRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDG 226
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 37/206 (17%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK--HYAAAISLIKRAHSSGVAPDIYTL 103
+D AV+ F+ ML NP P + +FN + + ++K HY AISL + + V PDI T
Sbjct: 48 VDNAVSSFNHMLCVNPPPPIIEFNKILGSLVKSKNNHYPTAISLFNQLELNRVTPDIVTF 107
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNG------------------- 144
NIVINC CHL F S+LG + K G +P TL T++ G
Sbjct: 108 NIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKGETRAALQMLRKIEGKLVNT 167
Query: 145 ----------------LCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
N A M PN YT +++ CK G+ +
Sbjct: 168 DVVMYTAIIDMLSFMAFAWLVNSKQAFGLFHEMVLTNILPNVYTSNILVDALCKEGNVKQ 227
Query: 189 AVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M+++ P+ V Y ++MDG
Sbjct: 228 AKNMIAMMMKQGVVPDVVTYTSLMDG 253
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 72 FTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGL 131
F ++ +K A L + + P++YT NI+++ LC +++ ++ K G+
Sbjct: 184 FAWLVNSKQ---AFGLFHEMVLTNILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGV 240
Query: 132 RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVL 191
P T ++++G CL N V A + +P+ +++ IING CKI + A+
Sbjct: 241 VPDVVTYTSLMDGYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALN 300
Query: 192 CMRNMVERHCEPNAVVYNAIMDG 214
+ M HCEPN V Y++++DG
Sbjct: 301 LFKEM---HCEPNMVTYSSLIDG 320
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 39/202 (19%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A FH+M+ N P V N L + + + A ++I GV PD+ T +++
Sbjct: 193 AFGLFHEMVLTNILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMD 252
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + + V ++ K ++P + I+NGLC V A+ + M +P
Sbjct: 253 GYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEMH---CEP 309
Query: 169 NSYTFGAIINGFCKIG------------------------------------DTESAVLC 192
N T+ ++I+G CK G + A+
Sbjct: 310 NMVTYSSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIAL 369
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
++ + ++ EPN YN ++DG
Sbjct: 370 VKKIKDQGIEPNMTTYNILIDG 391
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K +D A+ F +M P + ++SL + ++ + A L+ + H
Sbjct: 285 IINGLCKIKMVDEALNLFKEMHCE---PNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDR 341
Query: 96 VAP-DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV--- 151
P +I T N +++ LC ++++ + G+ P T N +++GLC E +
Sbjct: 342 GQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNA 401
Query: 152 ----ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
AVT ME+ G P++ T+ II K + + A +R M+ R
Sbjct: 402 QGLFDEAVTLLSKMEDNGCIPDAVTYETIIRALFKNDENDKAEKLLREMIAR 453
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + + + + K A++L K H P++ T + +I+ LC R + +
Sbjct: 277 PDVHSYTIIINGLCKIKMVDEALNLFKEMHCE---PNMVTYSSLIDGLCKSGRVSHAWEL 333
Query: 123 LGLVFKTGLRPTTA-TLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
L + +P T N++++ LC ++V A+ + +++ G +PN T+ +I+G C
Sbjct: 334 LDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLC 393
Query: 182 KIGDT-------ESAVLCMRNMVERHCEPNAVVYNAIM 212
K G + AV + M + C P+AV Y I+
Sbjct: 394 KEGRLRNAQGLFDEAVTLLSKMEDNGCIPDAVTYETII 431
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ + ML P V + L + R + AA L+ + G+ D+ T NI
Sbjct: 394 MEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC ++ +L +F GL+P T NT+++G C+E + +A+ + ME
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRMEKER 513
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
QPN T+ +I G+CKI E+A + M+E+ PN Y+ +
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + L+ A+ + +M+ P + +N+L + K A ++
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQE 373
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T N +I+ C G S+ + + G+ P +T ++ GLC + ++ +A
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAK 433
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
MEN G + + T+ +I+G CK + +A + M +PN V YN +MDG
Sbjct: 434 ELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A AF +MLA P FN+L + ++ AAA + G+ P+I T N +IN
Sbjct: 257 AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLIN 316
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC+ + + + + GL+P T N ++NG C + + A + P
Sbjct: 317 GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVP 376
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF +I+ +CK G E +M+E PN Y ++ G
Sbjct: 377 NVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAG 422
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ +M+ + FN + R A I+ + G++P + T N +++ C
Sbjct: 188 YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYC- 246
Query: 113 LRRTAFGLSVLGLVFKTGLR-----PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+R + G F + P T NT+++G C + NVA+A M+ G +
Sbjct: 247 -KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ ++ING C G E A+ MV +PN V YNA+++G
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 71/167 (42%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA F +M P + +NSL + AI L + G+ P+I T N +I
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
N C + VL V K L P T NT+++ C E + + M G
Sbjct: 351 NGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGIL 410
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ +I G C+ D ++A + M + + + V YN ++DG
Sbjct: 411 PNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 457
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K + A + P V FN++ + SL G
Sbjct: 349 LINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEG 408
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T +I LC + +L + GL+ T N +++GLC + +A
Sbjct: 409 ILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M N G +PN T+ +++G+C G ++A+ + M + +PN V YN ++ G
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKG 527
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ PD+ NI+ NC C L F SVL + K G P T TLNT++ GLCL+ ++ A
Sbjct: 5 GIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGDIHQA 64
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ F + G+ + +++G +IN CK G+T++A+ +R + + +P+ V Y AI+D
Sbjct: 65 LHFHDKLVAIGFMLDQFSYGTLINDLCKAGETKAALELLRRVDGKLVQPDVVKYIAIID 123
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 16/179 (8%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + AA+ ++ P V + ++ + + KH A L + S
Sbjct: 86 LINDLCKAGETKAALELLRRVDGKLVQPDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSKR 145
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PDI T N +I+ C + G +P T N++++G CL V A
Sbjct: 146 ISPDILTYNALISDFCIV----------------GFKPNFVTYNSLMDGYCLLKEVNKAK 189
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G P ++ +INGFCKI + A+ M R P+ V YN+++DG
Sbjct: 190 SIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIPDVVTYNSLIDG 248
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL K A S+ GV P I + NI+IN C +++ +++ +
Sbjct: 172 YNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMH 231
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
L P T N++++GLC ++ A+ M + G P+ T
Sbjct: 232 CRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 276
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ + ML P V +N L + R + AA L+ + G+ D+ T NI
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC ++ +L +F GL+P T NT+++G C+E + +A+ ME
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
QPN T+ +I G+CKI E+A + M+E+ PN Y+ +
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + L+ A+ + +M+ P + +N+L + K A +
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T N +I+ C G S+ + G+ P +T N ++ GLC + ++ +A
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAK 433
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
MEN G + + T+ +I+G CK + +A + M +PN V YN +MDG
Sbjct: 434 ELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A AF +MLA P FN+L + ++ AAA + G+ P+I T N +IN
Sbjct: 257 AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLIN 316
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC+ + + + + GL+P T N ++NG C + + A + P
Sbjct: 317 GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVP 376
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF +I+ +CK G E +M++ PN YN ++ G
Sbjct: 377 NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG 422
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ +M+ + FN + R A I+ + G++P++ T N +++ C
Sbjct: 188 YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC- 246
Query: 113 LRRTAFGLSVLGLVFKTGLR-----PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+R + G F + P T NT+++G C + NVA+A M+ G +
Sbjct: 247 -KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ ++ING C G E A+ MV +PN V YNA+++G
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA F +M P + +NSL + AI L + G+ P+I T N +I
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
N C + V V K L P T NT+++ C E + + M + G
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ +I G C+ D ++A + M + + + V YN ++DG
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 457
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K + A F + P V FN++ + SL G
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T N +I LC + +L + GL+ T N +++GLC + +A
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M N G +PN T+ +++G+C G ++A+ M + +PN V YN ++ G
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Query: 90 RAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLEN 149
RA G + + N +++ L + V + K + T N +NGLC
Sbjct: 155 RAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAG 214
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCK---IGDTESAVLCMRNMVERHCEPNAV 206
+ A M+ G PN T+ +++G+CK G A M+ M+ PN V
Sbjct: 215 KLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEV 274
Query: 207 VYNAIMDG 214
+N ++DG
Sbjct: 275 TFNTLIDG 282
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 12/174 (6%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAI--SLI---KRAHSSGVAPDI 100
L+ H + + + V+ F L +FV KH +++ SL+ R ++ + D+
Sbjct: 78 LEPTSKVLHFLANSKRYSKVRSF--LDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDM 135
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
L V N H AF + G + + + N +++ L EN + +
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAK-----DYGFKLSLTSCNPLLSALVKENKIGDVEYVYKE 190
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M N TF ING C+ G A + +M PN V YN ++DG
Sbjct: 191 MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDG 244
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ + ML P V +N L + R + AA L+ + G+ D+ T NI
Sbjct: 260 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 319
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC ++ +L +F GL+P T NT+++G C+E + +A+ ME
Sbjct: 320 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 379
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
QPN T+ +I G+CKI E+A + M+E+ PN Y+ +
Sbjct: 380 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 425
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + L+ A+ + +M+ P + +N+L + K A +
Sbjct: 180 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 239
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T N +I+ C G S+ + G+ P +T N ++ GLC + ++ +A
Sbjct: 240 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAK 299
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
MEN G + + T+ +I+G CK + +A + M +PN V YN +MDG
Sbjct: 300 ELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 358
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A AF +MLA P FN+L + ++ AAA + G+ P+I T N +IN
Sbjct: 123 AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLIN 182
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC+ + + + + GL+P T N ++NG C + + A + P
Sbjct: 183 GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVP 242
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N TF +I+ +CK G E +M++ PN YN ++ G
Sbjct: 243 NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG 288
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ +M+ + FN + R A I+ + G++P++ T N +++ C
Sbjct: 54 YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC- 112
Query: 113 LRRTAFGLSVLGLVFKTGLR-----PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+R + G F + P T NT+++G C + NVA+A M+ G +
Sbjct: 113 -KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 171
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ ++ING C G E A+ MV +PN V YNA+++G
Sbjct: 172 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 218
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K + A F + P V FN++ + SL G
Sbjct: 215 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 274
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ T N +I LC + +L + GL+ T N +++GLC + +A
Sbjct: 275 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 334
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M N G +PN T+ +++G+C G ++A+ M + +PN V YN ++ G
Sbjct: 335 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 393
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA F +M P + +NSL + AI L + G+ P+I T N +I
Sbjct: 157 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 216
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
N C + V V K L P T NT+++ C E + + M + G
Sbjct: 217 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 276
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ +I G C+ D ++A + M + + + V YN ++DG
Sbjct: 277 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 323
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Query: 90 RAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLEN 149
RA G + + N +++ L + V + K + T N +NGLC
Sbjct: 21 RAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAG 80
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCK---IGDTESAVLCMRNMVERHCEPNAV 206
+ A M+ G PN T+ +++G+CK G A M+ M+ PN V
Sbjct: 81 KLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEV 140
Query: 207 VYNAIMDG 214
+N ++DG
Sbjct: 141 TFNTLIDG 148
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 38 NSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS-GV 96
+ L T + V+ FH +L +P P ++ FN L + + + K Y A +SL S +
Sbjct: 42 KKLHKLPTFNDTVSSFHHILHHHPPPPIQHFNKLLSTLIKLKRYNAVVSLYTILQSKPTI 101
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
P + T +I+IN L + F S+LG + K G + L T++ GLCL+ V AV+
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G++ + +G IING CKIG T A+ M + PN ++YN ++DG
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDG 219
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG-VAPDIYTLN 104
+D A +M+ V +NS+ + AA+ L+ G V PD+YT N
Sbjct: 226 VDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFN 285
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I+I+ LC L R + +V+ ++ K G +P + N ++NG CL +V A M
Sbjct: 286 ILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVER 345
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN ++ +ING+CK+ + A++ + M ++ P+ V YN ++DG
Sbjct: 346 TALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDG 395
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N ++ +D A+ +M N P +N L ++++ L++ +SG
Sbjct: 357 LINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASG 416
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ T N++++ + L++ + + G+ P T N +++GLC + A
Sbjct: 417 QPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAK 476
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + G QPN T+ +I+G CK G + A + MV + PN + ++ I+
Sbjct: 477 EIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N+ L + A + +L V+ +L + A+SL+ G
Sbjct: 111 LINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRG 170
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D +IN LC + +T + + + K + P NT+++GLC + V A
Sbjct: 171 FRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEAC 230
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER-HCEPNAVVYNAIMDG 214
M G + + Y++ ++I+GFC +G ++AV + MV R P+ +N ++DG
Sbjct: 231 GLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDG 290
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 3/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPF--PCVKDFNSLFTFVARTKHYAAAISLIKRAHS 93
LL+++ LK +A V+ + +L + P P + F+ L A+ A SL+
Sbjct: 75 LLSTLIKLKRYNAVVSLY-TILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILK 133
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
G D+ L ++ LC R +S+L G R TI+NGLC
Sbjct: 134 MGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRD 193
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A+ M+ PN + +I+G CK G + A MVE E + YN+++
Sbjct: 194 AIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIH 253
Query: 214 G 214
G
Sbjct: 254 G 254
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
++ A F +M+ P V + +L + + A+ L+ H+ + PD T N
Sbjct: 331 SVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYN 390
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+++ L R+ + ++ + +G T N +++ A+ +H+
Sbjct: 391 CLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEI 450
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN T+ +++G CK G + A + + + C+PN YN ++ G
Sbjct: 451 GISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHG 500
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
++LN I SL +D V+ F+ ML P + F + + + H+ ISL +
Sbjct: 14 YILNLIHSL-NVDHYVSEFNHMLNIKLTPPIFKFGKILGSLVKINHFHTVISLSRLIELR 72
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ DI LNI++NC C L + + SVL + K G +P T TL T++ GLC +
Sbjct: 73 GIQTDIVNLNILVNCFCQLGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSGQIEGL 132
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +PN + II+ CK D S + M+++ EPN V Y ++MDG
Sbjct: 133 LV----------KPNVVMYSTIIDSLCK--DKLSGAV----MIKQGVEPNVVTYTSLMDG 176
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K ++ A F M + N P +NSL + ++ + LI H+
Sbjct: 208 MINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRC 267
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ T N +++ LC + +++L + G++P T +V+GLC +A A
Sbjct: 268 QPVNVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAR 327
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY N + ++N FCK G + A+ + M + C P+A+ Y ++
Sbjct: 328 EIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPDAITYQTLI 384
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A F+ + P + +N + + + K A +L K HS
Sbjct: 173 LMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMINGLCKNKMVNEAANLFKDMHSRN 232
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD + N +I+ LC + ++ + T N++++ LC + V A+
Sbjct: 233 MTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNSLLDALCKNHQVDKAI 292
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ M++ G QPN YT+ +++G CK G A +++ + N +YN +++
Sbjct: 293 ALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNVMVN 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V + SL K A + GV P++++ N++IN LC +
Sbjct: 158 MIKQGVEPNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMINGLCKNKM 217
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
++ + + P T + N++++GLC +++ M N N T+ +
Sbjct: 218 VNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNS 277
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ CK + A+ ++ M ++ +PN Y ++DG
Sbjct: 278 LLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDG 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + + AI+L+K+ G+ P++YT I+++ LC R A + +
Sbjct: 275 YNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLL 334
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G + N +VN C E A++ ME+ G P++ T+ +I + +
Sbjct: 335 TKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPDAITYQTLICALFENNKND 394
Query: 188 SAVLCMRNMVER 199
AV +R M+ R
Sbjct: 395 KAVKLLREMIVR 406
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN++ +A +M FP +N+L + + Y AA LI S G
Sbjct: 185 LLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKG 244
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+A D+ T N++I+ LC R+A G +L + K + P T NT++NGL E + A
Sbjct: 245 IAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVAT 304
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M PNS T+ +I G C G+ E A+ MV PN V Y A+++G
Sbjct: 305 KVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNG 363
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
+ D A H +L P K F +L + R + A+ L GV+ ++
Sbjct: 847 SFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMS 906
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+I L R+T +LG++ + + PT AT T+++ C E NVA A+ ME
Sbjct: 907 AIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQC 966
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + + +I+G C GD ++A M +R PN +Y ++D
Sbjct: 967 HVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLID 1015
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L S+ + +D +FF +M+A P V FN L + + +A L+++ +G
Sbjct: 150 VLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETG 209
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P T N ++N C R ++ + G+ T N +++ LC ++ A
Sbjct: 210 HFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGY 269
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M PN T+ +ING K G A M + PN+V YN ++ G
Sbjct: 270 LILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFG 328
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 6/165 (3%)
Query: 53 FHQMLAANPF----PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
F ++ PF P V F+ L R A+ + G +P ++T N+V+
Sbjct: 95 FGALMETYPFCNSNPAV--FDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLG 152
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L R S + + P AT N ++N LC SA R M+ G+ P
Sbjct: 153 SLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFP 212
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ T+ ++N +CK G ++A + M + + YN ++D
Sbjct: 213 TAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLID 257
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 3/169 (1%)
Query: 47 DAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
DA AF +++ F P V N + + + + S K ++ V+P++ T NI
Sbjct: 127 DAVEAF--RLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNI 184
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N LC + +L + +TG PT T NT++N C + +A M + G
Sbjct: 185 LLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKG 244
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ +I+ C+ + L +R M + PN + YN +++G
Sbjct: 245 IAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLING 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ T +R+ + + A++L+ + PD +T +I LC + L + G
Sbjct: 589 YNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAI 648
Query: 128 KTGL-RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
+ GL P A ++V+GL E + +A+ M N G QP++ F +++ + + G
Sbjct: 649 EKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKM 708
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M R N YN ++ G
Sbjct: 709 SKVNDILSTMRSRSLCFNLATYNILLHG 736
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 66/163 (40%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
+++M+ P ++SL ++ A+ +++ G D +TLN++++ LC
Sbjct: 749 LYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLC 808
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
++ + G+ P T N++ NG + A + GY P
Sbjct: 809 ERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCK 868
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F +I G C++G+ + A+ M V +AI+ G
Sbjct: 869 QFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRG 911
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + A F +M N P +N+L + A+ L S G
Sbjct: 290 LINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHG 349
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGL--SVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+ P+ T ++N + + FGL SVL + G+R + T+++GLC +
Sbjct: 350 LRPNEVTYGALLNGIS--KHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEE 407
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
AV M P+ TF ++NGF K G T
Sbjct: 408 AVQLLDDMLKVSVSPDIVTFSVLVNGFLKAGKT 440
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ L+ V+PDI T ++++N G G KTGL P +T++
Sbjct: 408 AVQLLDDMLKVSVSPDIVTFSVLVN----------GFLKAG---KTGLVPNRVLHSTLIY 454
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
C N+ A+ M +G+ + +T ++ FC+ G E A + +M P
Sbjct: 455 NYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAP 514
Query: 204 NAVVYNAIMD 213
++V ++ I+D
Sbjct: 515 SSVTFDCIID 524
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 94.7 bits (234), Expect = 5e-20, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 84/168 (50%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A F +ML P V FN L + + + L + GV P+++T NI
Sbjct: 198 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 257
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I LC + +LG V + GLRP T NT++ GLC ++ V A M N G+
Sbjct: 258 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 317
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+PN +T+ +II+G+CK G A +++ V + +P+ Y ++++G
Sbjct: 318 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 365
Score = 92.8 bits (229), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 80/167 (47%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+A F L P + +N+L + + A+ L+ G PDI+T N++
Sbjct: 373 DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 432
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
IN LC + + ++G G P T NT+V+G C + + SA+ M + G
Sbjct: 433 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 492
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ T+ ++NG CK +E + + M E+ C PN + YN I++
Sbjct: 493 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIE 539
Score = 85.9 bits (211), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + + L A + P + +N+L R +AI L+ R S G
Sbjct: 432 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 491
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N ++N LC ++ + + + + G P T NTI+ LC V AV
Sbjct: 492 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAV 551
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH-CEPNAVVYNAIM 212
M++ G P+ +FG +I GFCK+GD + A R M +++ YN I+
Sbjct: 552 DLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIII 609
Score = 75.1 bits (183), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 73/162 (45%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
H+M+ P +NS+ + A ++K A G PD +T ++N C
Sbjct: 309 LHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQ 368
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
++V GLRP+ NT++ GLC + + A+ M G +P+ +T
Sbjct: 369 DGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWT 428
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ IING CK+G A + + + + C P+ YN ++DG
Sbjct: 429 YNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 470
Score = 70.9 bits (172), Expect = 9e-13, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R LK LD+A+ ++M + P V +N+L + +T + + K G AP+I
Sbjct: 473 RQLK-LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI 531
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRP--------------------------- 133
T N +I LC+ ++ + +LG + GL P
Sbjct: 532 ITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRG 591
Query: 134 ---------TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
TTAT N I++ + N+ A+ M+ G P++YT+ +I+GFCK G
Sbjct: 592 MEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTG 651
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + +E+ P+ + +++
Sbjct: 652 NVNQGYKFLLENIEKGFIPSLTTFGRVLN 680
Score = 64.3 bits (155), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 70/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ ++M P + +N + + + + A LI A + G PDI+T N +++
Sbjct: 410 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 469
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + + ++ ++ G+ P T NT++NGLC + + M G P
Sbjct: 470 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 529
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N T+ II C AV + M + P+ V + ++ G
Sbjct: 530 NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 575
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 1/172 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS- 94
++ S+ + K ++ AV +M + P V F +L T + A L +
Sbjct: 537 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 596
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
V+ T NI+I+ L + + K G P T +++G C NV
Sbjct: 597 DVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQG 656
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
F G+ P+ TFG ++N C + AV + MV++ P+ V
Sbjct: 657 YKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 708
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
+++S+ +K ++ A + +M++ P V +++L F V + K AI L +
Sbjct: 48 IIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKD---AIDLFNKMI 104
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ PD+YT NI+++ C + G +V ++ K G++P T ++++G CL V
Sbjct: 105 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 164
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE---PNAVVYN 209
A + M G P++ ++ +INGFCKI + A+ + M HC+ PN V Y
Sbjct: 165 KANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKM---HCKNIIPNVVTYT 221
Query: 210 AIMDG 214
+++DG
Sbjct: 222 SLIDG 226
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + AA+ L++R V P++ N +I+ +C ++ + +
Sbjct: 10 YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 69
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T + +++G + + A+ M +P+ YTF +++GFCK G +
Sbjct: 70 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 129
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+++ +PN V Y ++MDG
Sbjct: 130 EGKTVFAMMMKQGIKPNVVTYCSLMDG 156
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M P + +N + + K A++L K+ H + P++ T
Sbjct: 160 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 219
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+I+ LC + ++ L ++ + G+ P T ++I++ LC + V A+ ++
Sbjct: 220 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 279
Query: 163 NA--------GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + Y + +I GFC G A+ + M + P+A Y I+
Sbjct: 280 DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIII 337
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M N P V + SL + ++ + A+ L+ H G
Sbjct: 188 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 247
Query: 96 VAPDIYTLNIVINCLC--HLRRTAFGL------SVLGLVFKTGLRPTTATLNTIVNGLCL 147
V PDI T + +++ LC H A L V +F G ++ G C+
Sbjct: 248 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCV 307
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
+ A+ ME+ G P++ T+ II K + + A +R M+ R
Sbjct: 308 KGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 65/150 (43%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P V + SL K A S+ GV PD + NI+IN C
Sbjct: 135 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCK 194
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+++ +++ + + P T ++++GLC ++ A+ M + G P+ T
Sbjct: 195 IKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 254
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+ +I++ CK + A+ + + ++ E
Sbjct: 255 YSSILDALCKNHQVDKAIALLTKLKDQVFE 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G D + +IN LC + + L +L V ++P NTI++ +C V A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 61
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G P+ T+ A+I+GF +G + A+ M+ + +P+ +N ++DG
Sbjct: 62 FDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 121
>Medtr1g034440.1 | PPR superfamily protein | LC |
chr1:12539755-12540993 | 20130731
Length = 412
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 42 SLKTLD--AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS----- 94
+L+TLD +A+ F ML + F + DFN LF+ + + L +R S
Sbjct: 59 NLETLDHFSAIRIFDLMLDYDGFYSISDFNFLFSSLIKKGCLLTVFQLAQRWEESLSRKC 118
Query: 95 --GVAPDIYTLNIVINCLCHLRRTA----FGLSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
V P+I T I+I+C H ++ + F S+ + + G RPTT+TLN I GLCL
Sbjct: 119 YDRVYPNIDTWKILISC--HSKKKSGNISFAFSLFHRIIEDGHRPTTSTLNDIFRGLCLR 176
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
+ A+ F + G+Q N T+ II+G CKIG+T+ A+ +R + H E N
Sbjct: 177 GQIYKAIMFYNYTILKGFQLNLETYSIIIHGLCKIGETKKAIHFLREAPQIHKEQN 232
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
+++S+ K + A + +M++ FP V +N+L F V + K AI L +
Sbjct: 247 IIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKD---AIGLFNKMT 303
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
S + PD+YT NI+++ C R + L ++ K G++P T N++++ CL N V
Sbjct: 304 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVN 363
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A + M + G N ++ +IN FCKI + A+ + M + PN + Y++++
Sbjct: 364 KAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLI 423
Query: 213 DG 214
DG
Sbjct: 424 DG 425
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 19/177 (10%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M FP V ++SL + ++ + A+ L H G
Sbjct: 387 MINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRG 446
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI TL + G+RP T +++GLC + A
Sbjct: 447 QQPDIITLTRQLK-------------------DQGIRPNMFTYTILIDGLCKGGRLEDAR 487
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY T+ +I+GFC G + A+ + M + C PNAV Y I+
Sbjct: 488 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIII 544
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 20/159 (12%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V +NSL A S+ GV ++ + +I+IN C ++
Sbjct: 337 MMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKM 396
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA----------------VTFTR 159
+ + + + P T +++++GLC ++ A +T TR
Sbjct: 397 VDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTR 456
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
+++ G +PN +T+ +I+G CK G E A RN+ E
Sbjct: 457 QLKDQGIRPNMFTYTILIDGLCKGGRLEDA----RNIFE 491
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 120 LSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
L +L V L+P NTI++ +C + A M + P+ T+ A+ING
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALING 285
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
FC +G + A+ M + P+ +N ++D
Sbjct: 286 FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 320
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 91/179 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ +K ++ A + +M++ P V +++L + AI L +
Sbjct: 184 IIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILEN 243
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+++ C + G +V ++ K G++P T ++++G CL V A
Sbjct: 244 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAN 303
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G P++ ++ +INGFCKI + A+ + M ++ PN V Y +++DG
Sbjct: 304 SIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDG 362
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 23/165 (13%)
Query: 50 VAFFHQML-AANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
V+ F+++L NP P + +F + + + Y AISL ++ G+A ++ TLNI+IN
Sbjct: 44 VSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILIN 103
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C L + SV + K G P TL T++ GLCL+
Sbjct: 104 CFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK-------------------- 143
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++G +ING CK+G +A+ +R + + +PN V+YN I+D
Sbjct: 144 --VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIID 186
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 64 CVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
C+K + +L + + AA+ L++R V P++ N +I+ +C ++ +
Sbjct: 141 CLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL 200
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G+ P T + +++G + + A+ M +P+ YTF +++GFCK
Sbjct: 201 YSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 260
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + M+++ +PN V Y ++MDG
Sbjct: 261 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 292
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M P + +N + + K A++L K+ H + P++ T
Sbjct: 296 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+I+ LC + ++ L ++ + G+ P T ++I++ LC + V A+ ++
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 415
Query: 163 NA--------GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + Y + +I GFC G A+ + M + P+A Y I+
Sbjct: 416 DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIII 473
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M N P V + SL + ++ + A+ L+ H G
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383
Query: 96 VAPDIYTLNIVINCLC--HLRRTAFGL------SVLGLVFKTGLRPTTATLNTIVNGLCL 147
V PDI T + +++ LC H A L V +F G ++ G C+
Sbjct: 384 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCV 443
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
+ A+ ME+ G P++ T+ II K + + A +R M+ R
Sbjct: 444 KGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 495
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 65/150 (43%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P V + SL K A S+ GV PD + NI+IN C
Sbjct: 271 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCK 330
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+++ +++ + + P T ++++GLC ++ A+ M + G P+ T
Sbjct: 331 IKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 390
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+ +I++ CK + A+ + + ++ E
Sbjct: 391 YSSILDALCKNHQVDKAIALLTKLKDQVFE 420
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 6/174 (3%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M++ P V +++L + AI L + + PD YT
Sbjct: 217 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 276
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C R+ G +V ++ K G+ P T N++++G CL V +A + M
Sbjct: 277 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQ 336
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE---PNAVVYNAIMDG 214
G P+ ++ +INGFCKI + A M E HC+ PN V YN+++DG
Sbjct: 337 GGVNPDIRSYNILINGFCKIKKVDKA---MNLFNEMHCKNIIPNVVTYNSLIDG 387
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F+++L NP P +FN + + T A S++ ++N
Sbjct: 66 VDDAVSLFNRLLRQNPTPPAFEFNKILEELNLTYSIATFSSIV-------------SVNW 112
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
V+ + SV + K G P T TLNT++ GLCL+ + A F + G
Sbjct: 113 VL---------SLAFSVFAKILKMGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALG 163
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + ++G +I+G CK+G+T +A+ ++ + + + NAV+YN ++ G
Sbjct: 164 FHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYG 212
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M P ++ +N L + K A++L H + P++ T
Sbjct: 321 VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVT 380
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I+ L R ++ L ++ + G+ P T N+I++ L + V A+ +
Sbjct: 381 YNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFK 440
Query: 163 NAGYQPNSYTFGAIIN--------------------GFCKIGDTESAVLCMRNMVERHCE 202
+ G QP+ YT+ +I+ GFCK G + A+ + M + C
Sbjct: 441 DQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCI 500
Query: 203 PNAVVY 208
PNAV Y
Sbjct: 501 PNAVTY 506
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P V +NSL K A S+ GV PDI + NI+IN C
Sbjct: 296 FAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK 355
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+++ +++ + + P T N++++GL ++ A+ M + G PN T
Sbjct: 356 IKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILT 415
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +II+ K + A+ + ++ +P+ Y ++DG
Sbjct: 416 YNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 457
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +K +D A+ F++M N P V +NSL ++++ + A+ L+ + H G
Sbjct: 349 LINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 408
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRP--------------------TT 135
V P+I T N +I+ L + ++++ G++P T
Sbjct: 409 VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITV 468
Query: 136 ATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRN 195
T N +++G C + A++ M+++ PN+ T+ I + + A R
Sbjct: 469 NTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFRE 528
Query: 196 MVER 199
M+ R
Sbjct: 529 MITR 532
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 1/164 (0%)
Query: 52 FFHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
FH L A F + + +L + + AA+ L++R V + N VI +
Sbjct: 154 LFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGM 213
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C + + + G+ P T + +++G + + A+ + +P+
Sbjct: 214 CKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDG 273
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
YTF +++GFCK + M+++ P+ V YN++MDG
Sbjct: 274 YTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDG 317
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ + + KH A L S G++P++ T + +I+ + + + + +
Sbjct: 206 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 265
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
++P T N +V+G C + + T M G P+ T+ ++++G+C + +
Sbjct: 266 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVN 325
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+A M + P+ YN +++G
Sbjct: 326 TAKSIFNTMAQGGVNPDIRSYNILING 352
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+A +P V F+SL + A L
Sbjct: 140 IIDSLCKDKLVLDAYGLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKN 199
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D+YT NI+++ LC ++L ++ K G+ P T ++++G CL N V A
Sbjct: 200 INRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAK 259
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G P+++T+ +INGFCKI + A+ M R PN V YN+++DG
Sbjct: 260 HVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDG 318
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 24/190 (12%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A FH+M+ N V FN L + + A +L+ GV PD+ T +++
Sbjct: 188 AFRLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMD 247
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + V ++ + G+ P T + ++NG C V A++ M G P
Sbjct: 248 GYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAP 307
Query: 169 NSYTFGAIINGFCKIGDTESA------------------------VLCMRNMVERHCEPN 204
N+ T+ ++I+G CK G A LC + +++ +P+
Sbjct: 308 NTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFTYNSLIDALCKNHHIDQGIQPD 367
Query: 205 AVVYNAIMDG 214
YN ++DG
Sbjct: 368 MYTYNILIDG 377
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 28/181 (15%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A++ F +M P +NSL + ++ A L+ H++G
Sbjct: 280 MINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNG 339
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
DI+T N +I+ LC G++P T N +++GLC + +A
Sbjct: 340 QPADIFTYNSLIDALCKNHH-----------IDQGIQPDMYTYNILIDGLCKGGRLKNAQ 388
Query: 156 TFTR-----------------HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
+ M++ G P++ T+ II + E A +R M+
Sbjct: 389 DIFQDLLIKEGLFDEVDALMSKMDDNGIIPDAVTYVTIIRALFHKDENEQAEKLLREMIA 448
Query: 199 R 199
R
Sbjct: 449 R 449
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M++ P V +N+L + AI L + + PD+YT
Sbjct: 56 KHVNDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTF 115
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C + +VL ++ K G++P T + +++G CL V A + M
Sbjct: 116 NILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQ 175
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G P+ +++ +ING CKI T+ A+ M R P+ V YN+++DG
Sbjct: 176 GGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDG 226
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +K D A+ F +M P V +NSL + ++ + A+ L+ H G
Sbjct: 188 LINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 247
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PDI T + +++ LC + +++L + G+RP T +++GLC + A
Sbjct: 248 VPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 307
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY T+ +I+GFC G + A+ + M + C PNA+ Y I+
Sbjct: 308 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M P + ++ L + + K A++L + H + PD+ T
Sbjct: 160 VKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I+ LC + ++ L ++ + G+ P T ++I++ LC + V A+ +++
Sbjct: 220 YNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLK 279
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESA 189
+ G +PN YT+ +I+G CK G E A
Sbjct: 280 DQGIRPNMYTYTILIDGLCKGGRLEDA 306
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V +++L K A S+ GV PDI++ +I+IN LC ++
Sbjct: 138 MMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKM 197
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
T +++ + + P T N++++GLC ++ A+ M + G P+ T+ +
Sbjct: 198 TDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 257
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++ CK + A+ + N+ ++ PN Y ++DG
Sbjct: 258 ILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDG 296
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + AA+ L++R V P + N +I+ +C + + +
Sbjct: 10 YGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSEMV 69
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T N +++G C+ + A+ M P+ YTF +++ FCK G +
Sbjct: 70 SKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMK 129
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M+++ +PN V Y+A+MDG
Sbjct: 130 EAKNVLAMMMKQGMKPNVVTYSALMDG 156
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G D + +IN LC + T L +L V ++P+ NTI++G+C + +V A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M + P+ +T+ A+I+GFC +G + A+ M + P+ +N ++D
Sbjct: 62 FDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVD 120
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ + ++G +ING CK+G+T +A+ +R + + +P+ V+YN I+DG
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDG 51
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M++ P V +N+L + AI L + + PD+YT
Sbjct: 56 KHVNDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTF 115
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C + +VL ++ K G++P T + +++G CL V A + M
Sbjct: 116 NILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQ 175
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G P+ +++ +ING CKI T+ A+ M R P+ V YN+++DG
Sbjct: 176 GGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDG 226
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +K D A+ F +M P V +NSL + + + A+ L+ H G
Sbjct: 188 LINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 247
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PDI T + +++ LC + +++L + G+RP T +++GLC + A
Sbjct: 248 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAH 307
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY T+ +I+GFC G + A+ + M + C PNA+ Y I+
Sbjct: 308 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K ++ A + F+ M P + ++ L + + K A++L + H + PD+ T
Sbjct: 160 VKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I+ LC L + ++ L ++ + G+ P T ++I++ LC + V A+ ++
Sbjct: 220 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 279
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESA 189
+ G +PN YT+ +I+G CK G + A
Sbjct: 280 DQGIRPNMYTYTILIDGLCKGGRLDDA 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + AA+ L++R V P + N +I+ +C + + +
Sbjct: 10 YGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSEMV 69
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T N +++G C+ + A+ M P+ YTF +++ FCK G +
Sbjct: 70 SKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMK 129
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M+++ +PN V Y+A+MDG
Sbjct: 130 EAKNVLAMMMKQGMKPNVVTYSALMDG 156
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V +++L K A S+ GV PDI++ +I+IN LC ++
Sbjct: 138 MMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKM 197
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
T +++ + + P T N++++GLC ++ A+ M + G P+ T+ +
Sbjct: 198 TDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 257
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++ CK + A+ + + ++ PN Y ++DG
Sbjct: 258 ILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 296
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G D + +IN LC + T L +L V ++P+ NTI++G+C + +V A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M + P+ +T+ A+I+GFC +G + A+ M + P+ +N ++D
Sbjct: 62 FDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVD 120
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ + ++G +ING CK+G+T +A+ +R + + +P+ V+YN I+DG
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDG 51
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
G+ P + NI+INC C L +F S+L + K G P T TL T + LCL+ +
Sbjct: 4 KGIKPSFVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTITLTTFIKVLCLKGQIHQ 63
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A+ F + G+ + ++G +ING K+G+T+ A+ +R + + + NAV+YN ++D
Sbjct: 64 ALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELLRRVDGKLVQLNAVMYNTVID 123
Query: 214 G 214
G
Sbjct: 124 G 124
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC-------HLRRTAFGL 120
+N++ + + KH A L + + P + T + +I C + R
Sbjct: 118 YNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLKDAIGRVKEAK 177
Query: 121 SVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+V ++ K ++P T N++++G CL V A + M G P+ +++ +INGF
Sbjct: 178 NVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGF 237
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
CK T+ A+ M R P+ V YN+++DG
Sbjct: 238 CKSKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDG 271
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ + P V +NSL K A S+ GV PDI++ NI+IN C
Sbjct: 180 FAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCK 239
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ T +++ + L P T N++++GLC + A+ M + G PN T
Sbjct: 240 SKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIIT 299
Query: 173 FGAIINGFCKIGDTESAV 190
+ +I+N CK + A+
Sbjct: 300 YSSILNALCKNHQVDKAI 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A + F+ M P + +N L ++K A++L + H
Sbjct: 198 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRK 257
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N +I+ LC L + ++ L ++ + G P T ++I+N LC + V A+
Sbjct: 258 LIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIITYSSILNALCKNHQVDKAI 317
Query: 156 TFTRHMENAGYQ 167
T +++ Q
Sbjct: 318 TLLTKIKDEFSQ 329
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 42/173 (24%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLC--------------------HLRRTAFG--LS 121
A S++ + +G PD TL I LC HL + ++G ++
Sbjct: 29 AFSILAKILKNGYEPDTITLTTFIKVLCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLIN 88
Query: 122 VLGLVFKTG-----LRPTTATL--------NTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LG V +T LR L NT+++G+C + +V A M P
Sbjct: 89 GLGKVGETKEALELLRRVDGKLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYP 148
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRN-------MVERHCEPNAVVYNAIMDG 214
T+ A+I GFC +G + A+ ++ M+++ +PN YN++MDG
Sbjct: 149 GVVTYSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQDIKPNVFTYNSLMDG 201
>Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30131763-30132528 | 20130731
Length = 175
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 67/114 (58%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
G+ D+ L+I+INC CHL + + SVL +FK G +P T T+ T++ GLCL V
Sbjct: 4 QGIQTDVVNLSILINCFCHLHQLNYAFSVLAKIFKFGYQPDTITMTTLMKGLCLSGQVRK 63
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVV 207
A+ F + G++ + ++G +ING CK G+T +A+ + + + +P+ ++
Sbjct: 64 ALHFHDDVIEKGFKLDHVSYGTLINGLCKSGETRAALQVLEKIERLNVKPDVLI 117
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M FP V +++L + ++ + A+ L+ H G
Sbjct: 188 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRG 247
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T N +++ LC +++L + G+RP T +V GLC + A
Sbjct: 248 QQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDAR 307
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + Y + +I GFC G + A+ + M E C P+A Y I+
Sbjct: 308 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 364
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K ++ A + +M A P V +++L + AI L +
Sbjct: 48 IIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILEN 107
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++YT +I+++ C R +VL ++ K G++P T +++++G CL N V A
Sbjct: 108 INPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAE 167
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G N ++ +INGFCKI + A+ + M + P+ + Y+A++DG
Sbjct: 168 SIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDG 226
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 54 HQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
H+ + AN V+ ++ + + K A+ L K H + PD+ T + +I+ LC
Sbjct: 175 HRGVTAN----VQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKS 230
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
R ++ L ++ + G +P T N+I++ LC +++V A+ ++ G +P+ T+
Sbjct: 231 GRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTY 290
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ G C+ G E A +++ + + Y ++ G
Sbjct: 291 TILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQG 331
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 65/147 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
++S+ + + KH A L + ++P++ T + +I+ C + + + + +
Sbjct: 45 YSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMI 104
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T + +V+G C E V A M G +P+ T+ ++++G+C + +
Sbjct: 105 LENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 164
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A M R N Y+ +++G
Sbjct: 165 KAESIFNTMSHRGVTANVQSYSIMING 191
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 67/159 (42%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P V ++SL A S+ GV ++ + +I+IN C ++
Sbjct: 138 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKM 197
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ + + + P T + +++GLC ++ A+ M + G QP+ T+ +
Sbjct: 198 VDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNS 257
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++ CK + A+ + + + P+ Y ++ G
Sbjct: 258 ILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKG 296
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G D + +IN LC + T L +L V ++ ++I++ +C + +V A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDA 61
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M PN T+ A+I+GFC +G + A+ M+ + PN ++ ++DG
Sbjct: 62 FDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDG 121
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ + +M P +N+L + ++ A+ L+ G++P++ T
Sbjct: 280 MNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTT 339
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN +C ++ + + +L L+ GL P T T+V+G C + + A M ++G
Sbjct: 340 LINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSG 399
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ P+ T+ A++NGFC +G E AV +++MVER P+ V Y+ ++
Sbjct: 400 FVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVI 446
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++ + S+ D+ + F ++M P V +N++ + + A L+K
Sbjct: 200 MIRGMVSVGRFDSGLHFMNEMETKGCLPNVVTYNTMISGYCKENKLDEAFGLLKIMGGKR 259
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V ++ + N VIN LC R + V+ + GL P T NT+VNG C + N A+
Sbjct: 260 VEANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQAL 319
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G PN T+ +ING CK+ + A+ + M +R PN Y ++DG
Sbjct: 320 VLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDG 378
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ H+M P V + +L + + K+ + A+ ++ G++P+ T +++
Sbjct: 318 ALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVD 377
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C VL + +G P+ T N +VNG C V AV + M G P
Sbjct: 378 GFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFP 437
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ +I+ FC+ G+ A MVE+ P+AV Y++++ G
Sbjct: 438 DVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQG 483
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L ++ AV M+ FP V ++++ + R A +
Sbjct: 410 LVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKR 469
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD T + +I LC R+ + + + GL P T T++NG C+E ++ A+
Sbjct: 470 ILPDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKAL 529
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G+ P+ T+ +ING K T A + + PN V Y +++
Sbjct: 530 DLHDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLKLFYDESVPNDVTYETLIE 587
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 76/173 (43%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
SL ++ A F M+ N P + +N + + + + + + + G P++
Sbjct: 171 SLLSIQQANRVFCDMVRNNVSPNIYTYNVMIRGMVSVGRFDSGLHFMNEMETKGCLPNVV 230
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T N +I+ C + +L ++ + + N ++NGLC + + + M
Sbjct: 231 TYNTMISGYCKENKLDEAFGLLKIMGGKRVEANLISYNAVINGLCGQGRMNETMEVIEEM 290
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G P+ T+ ++NGFCK G+ A++ + M + PN V Y +++G
Sbjct: 291 SLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLING 343
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 76/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A +M+ + P V +N+L A+ ++K G+ PD+ + +
Sbjct: 385 MNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYST 444
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
VI+ C + + + + P T ++++ GLC + ++ A + M G
Sbjct: 445 VISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRG 504
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ ++NG+C G+ A+ M+++ P+ V Y+ +++G
Sbjct: 505 LSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVLING 553
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 72/179 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +K L A+ M P + + +L R A ++ SG
Sbjct: 340 LINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSG 399
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P + T N ++N C L R + VL + + GL P + +T+++ C + A
Sbjct: 400 FVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAF 459
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M P++ T+ ++I G C A + M+ R P+ V Y +M+G
Sbjct: 460 QMKLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNG 518
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M+A P V FNSL A L + + P +YT
Sbjct: 31 KLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTF 90
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
I+++ LC + SV+ ++ K G+ P T +I+ G CL N V R +
Sbjct: 91 TILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISR 150
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN+ ++ +INGFCKI A++ + M R P V Y++++DG
Sbjct: 151 MGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDG 201
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A F QM+ N P V F L + + A S+I GV P++ T
Sbjct: 68 LKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTS 127
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ C + V + + G+ P T + N ++NG C V A+ + M G
Sbjct: 128 IMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRG 187
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMV 197
P + T+ ++I+G CK T L MR M+
Sbjct: 188 IVPITVTYSSLIDGLCK--STMLGSLLMRCML 217
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 87.4 bits (215), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 85/171 (49%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + + ++ FP V +N+L + AI L + S + PD+YT
Sbjct: 347 KHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTF 406
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+++ C +VL ++ K ++P T +++++G CL N V A + M +
Sbjct: 407 SILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSH 466
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G N ++ +INGFCKI + A+ + M + P+ + Y++++DG
Sbjct: 467 RGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDG 517
Score = 86.3 bits (212), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 81/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M FP V ++SL + ++ + A+ L+ H G
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T N +++ LC +++L + G+RP T +V GLC + A
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + Y + +I GFC G + A+ + M E C P+A Y I+
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655
Score = 71.2 bits (173), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ K G P T TL T + G CL+ + A+ F + G+ + ++G +ING CK+G+
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T++A+ +R + +P+ V+YN I+DG
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDG 342
Score = 70.5 bits (171), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 54 HQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
H+ + AN V+ +N + + K A+ L K H + PD+ T + +I+ LC
Sbjct: 466 HRGVTAN----VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKS 521
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
R ++ L ++ + G +P T N+I++ LC +++V A+T ++ G +P+ T+
Sbjct: 522 GRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTY 581
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ G C+ G E A +++ + + Y ++ G
Sbjct: 582 TILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQG 622
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 68/159 (42%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ + P V ++SL A S+ GV ++ + NI+IN C ++
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ + + + P T +++++GLC ++ A+ M G QP+ T+ +
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
I++ CK + A+ + + + P+ Y ++ G
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG 587
Score = 50.8 bits (120), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV+ F+++L NP P +F + + ++KHY +SL ++ G+ + NI+IN
Sbjct: 94 AVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILIN 153
Query: 109 CLCHLRRTAFGLSVL 123
C L F SVL
Sbjct: 154 SFCQLGLIPFAFSVL 168
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 46/121 (38%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G PD TL I C + L V G + T++NGLC +
Sbjct: 257 NGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKA 316
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A+ R + QP+ + II+G CK A V + P+ YNA++
Sbjct: 317 ALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALIS 376
Query: 214 G 214
G
Sbjct: 377 G 377
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 87.4 bits (215), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++++R K D ++ +M + + FPC ++L T+ + A ++ G
Sbjct: 65 LIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRG 124
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++Y N+++ C + + + ++ + L P + NT++NGLC + A
Sbjct: 125 FHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAK 184
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+ +PNS TF A+I+GFCK GD E + M + E + VY+A++ G
Sbjct: 185 ELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243
Score = 78.2 bits (191), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 46 LDAAVAFFHQMLA--ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
L +++ FH L N P N+L + + KHY IS+ + S V P +L
Sbjct: 38 LSESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSL 97
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+ +I + ++ +F VLGL+ K G N ++ G C + A+ M+
Sbjct: 98 SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ ++ +ING CK A + M C+PN+V ++A++DG
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDG 208
Score = 77.8 bits (190), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
F++ML N P V ++ L + + + + A ++ V PD+ ++ + L
Sbjct: 256 LFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLS 315
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
R + + VL L+ K G P T N I+NGLC E V A+ M G +P+
Sbjct: 316 KNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVV 375
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMV--ERHCEPNAVVYNAIM 212
T+ ++ G C +G + AV + ++ E H +P+ +N ++
Sbjct: 376 TYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVI 418
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 58/106 (54%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ L K A SG++P+ T ++IN LC ++ + + +G RPT + NT++
Sbjct: 465 ALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMA 524
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
LC E++V A + M NA + P+ +F II+G K GD ESA
Sbjct: 525 SLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++ T + ++N LC ++ +L + +RP + +GL + A+
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN+ T+ AIING CK G + A+ + M ++ +P+ V Y+ ++ G
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKG 383
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 72/179 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K L A F +M P F++L + L++ G
Sbjct: 170 VINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMG 229
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D++ + +I+ C G + + + + P T + ++N LC + A
Sbjct: 230 LEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAA 289
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +P+ + + +G K G A+ + MV+R EPN V YNAI++G
Sbjct: 290 QMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIING 348
Score = 54.7 bits (130), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 37/216 (17%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS- 94
++N + +D A+ M P V +++L + A+ L+ S
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Query: 95 -GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+ PD++ N+VI LC RR V + + G T N +++G +
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTK 464
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIG------------------------DTESA 189
A+ + ++G PN+ T+ +ING CK+ +T A
Sbjct: 465 ALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMA 524
Query: 190 VLCMRNMVER-----------HCEPNAVVYNAIMDG 214
LC + VE+ + +P+ V +N I+DG
Sbjct: 525 SLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDG 560
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 78/216 (36%), Gaps = 37/216 (17%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N++ + A M P V + L +++ + AI ++ G
Sbjct: 275 LMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRG 334
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+ T N +IN LC R L +L + K G +P T +T+V GLC + AV
Sbjct: 335 EEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV 394
Query: 156 TFT------------------------------RH-------MENAGYQPNSYTFGAIIN 178
RH M G+ N T+ +I+
Sbjct: 395 DLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454
Query: 179 GFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ G A+ ++ V+ PNA Y +++G
Sbjct: 455 GYLSAGKLTKALELWKDAVDSGISPNAATYTVLING 490
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 1/151 (0%)
Query: 64 CVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL 123
CV +N++ + + K A L K P+ T + +I+ C G +L
Sbjct: 164 CVS-YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLL 222
Query: 124 GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
+ K GL + +++G C + ++ M PN T+ ++N CK
Sbjct: 223 EEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKK 282
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ A + M P+ V Y + DG
Sbjct: 283 QKWKEAAQMLDTMTGCKVRPDVVAYTVLADG 313
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M + FP V +N+L + A L + S + P +YT
Sbjct: 56 KHVNDAFDLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTF 115
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C +VL ++ K G+ P T +++++G CL N V +A M
Sbjct: 116 NILVDAFCKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSL 175
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G N +++ +INGFCKI T+ A+ M R P+ V YN++++G
Sbjct: 176 RGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLING 226
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K D A+ F +M P V +NSL + ++ + A+ L+ H G
Sbjct: 188 MINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRG 247
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T + +++ LC + +++L + G+RP T +++GLC + A
Sbjct: 248 QPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 307
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY T+ +I+GFC G + A+ + M + C PNA+ Y I+
Sbjct: 308 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + AA+ ++ P V +N++ + + KH A L S
Sbjct: 13 LINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMASKR 72
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD++T N +I+ C + + + + + PT T N +V+ C E NV A
Sbjct: 73 IFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGNVKEAK 132
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G PN+ T+ ++++G+C + + +A M R N YN +++G
Sbjct: 133 NVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMING 191
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V +N + + K A++L + H + PD+ T N +IN LC + ++ L ++
Sbjct: 182 VWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVD 241
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G P T +++++ LC + V A+ ++++ G +PN YT+ +I+G CK G
Sbjct: 242 EMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGG 301
Query: 185 DTESA 189
E A
Sbjct: 302 RLEDA 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 62/120 (51%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV ++++ NI+IN C ++ T +++ + L P T N+++NGLC ++ A
Sbjct: 177 GVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYA 236
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G P+ T+ ++++ CK + A+ + N+ ++ PN Y ++DG
Sbjct: 237 LKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDG 296
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 68/164 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + A+ +M P + ++SL + + AI+L+ G
Sbjct: 223 LINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQG 282
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++YT I+I+ LC R ++ + G T T +++G C + A+
Sbjct: 283 IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAL 342
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
M++ PN+ T+ II + + A +R M+ R
Sbjct: 343 ALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITR 386
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
G+ PDI T+NI+IN CHL + F S+ G + K G P TL T++ LCL +V
Sbjct: 4 QGIRPDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGDVQK 63
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A+ F ++ N P+ TF I+ FC G+ + A + M+ + +PN V Y+A+MD
Sbjct: 64 ALHFHENIVN----PDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVTYSALMD 119
Query: 214 G 214
G
Sbjct: 120 G 120
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L + A + F ++L P + +L + A+ H +
Sbjct: 16 LINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGDVQKALHF----HENI 71
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD+ T NI I+ C ++LG++ G++P T + +++G CL N V A
Sbjct: 72 VNPDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVTYSALMDGYCLLNGVNKAK 131
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G + + + +INGFCK + A+ M ++ P V YN ++DG
Sbjct: 132 HTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIPTIVTYNTVIDG 190
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GVA D++ NIVIN C + L + ++ + PT T NT+++GLC ++ A
Sbjct: 141 GVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIPTIVTYNTVIDGLCKSGRISYA 200
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M + G + T+ + ++ FCK + A+ ++ + + + + + ++DG
Sbjct: 201 WKLVREMRDMGQPADEITYNSFLHTFCKNHQLDKAIALVKEIHNQGIQVDLYTCSMLIDG 260
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ L ++ A F+ M+A V ++N + ++K A+ L + +S
Sbjct: 117 LMDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKN 176
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P I T N VI+ LC R ++ ++ + G T N+ ++ C + + A+
Sbjct: 177 IIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITYNSFLHTFCKNHQLDKAI 236
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + N G Q + YT +I+G K G + A ++++ + + V Y ++ G
Sbjct: 237 ALVKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQQIFKDLLIKGYNVDVVTYKYMISG 295
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/146 (18%), Positives = 64/146 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N K +D A+ F +M + N P + +N++ + ++ + A L++ G
Sbjct: 152 VINGFCKSKMMDEALDLFEEMYSKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMG 211
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D T N ++ C + ++++ + G++ T + +++GL + A
Sbjct: 212 QPADEITYNSFLHTFCKNHQLDKAIALVKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQ 271
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFC 181
+ + GY + T+ +I+G C
Sbjct: 272 QIFKDLLIKGYNVDVVTYKYMISGLC 297
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+DAA ++M A P V +NSL + R ++ L SG+ PD+++ NI
Sbjct: 58 IDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNI 117
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTG-LRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+++C L + V +F+ G + P+ A+ N ++NGLC V +A+ R++
Sbjct: 118 LMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRR 177
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+ P T+ A+ING CK A + + EPNA+ Y +M
Sbjct: 178 GFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVM 225
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 75 VARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPT 134
+ +T A + ++ S+G+ PD+ + N +IN C R L ++ + K G++
Sbjct: 263 LVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCD 322
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
T I++GLC + N A +M G+ N F +I++ K GD + AV
Sbjct: 323 QYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFD 382
Query: 195 NM 196
+M
Sbjct: 383 SM 384
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 76/200 (38%), Gaps = 35/200 (17%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ F + P V +N++ + + + A A ++ G P+ T V+
Sbjct: 167 ALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMK 226
Query: 109 C-------------LCHLRRTAFGL------SVLGLVFKTG----------------LRP 133
C L +RR F +V+ + KTG L P
Sbjct: 227 CCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVP 286
Query: 134 TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
A+ NT++N C + A+ +E G + + YT II+G CK G+ E A +
Sbjct: 287 DLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHL 346
Query: 194 RNMVERHCEPNAVVYNAIMD 213
M N V +N+I+D
Sbjct: 347 DYMNTLGFGFNLVAFNSILD 366
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 58/152 (38%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
+P + +N + + + + A+ L + G P++ T N +IN LC RR A
Sbjct: 145 YPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARR 204
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
VL G P T T++ + + M G+ + + + ++
Sbjct: 205 VLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALV 264
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
K G E A M+ P+ YN +++
Sbjct: 265 KTGRIEEADEIAEKMMSNGLVPDLASYNTMIN 296
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+NI I+ +C + A +VL K GL P T NT+++G C + +A M+
Sbjct: 10 MNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMK 69
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
AG P+ ++ ++ +G + + ++ M++ P+ YN +M
Sbjct: 70 EAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILM 119
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 86.3 bits (212), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + ++ A+ M+ P V +NSL + + + + AI ++++
Sbjct: 278 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 337
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P+ T N +I+ LC + ++ GL P T NT++ GLCL N A+
Sbjct: 338 CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAM 397
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+N G +P+ +T+ +I+ C + A++ ++ M C NAVVYN ++DG
Sbjct: 398 EMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDG 456
Score = 82.0 bits (201), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 79/177 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ L A+ +M P F +L A+ + K+ G
Sbjct: 173 LIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYG 232
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++ +++N C R L + V + G P T N++VNG C NV A+
Sbjct: 233 CLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDAL 292
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M G+ P+ YT+ ++I+G CK+G+ E A+ ++ M+ R C PN V YN ++
Sbjct: 293 DIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 349
Score = 79.7 bits (195), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 78/171 (45%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K D A+ F +M P ++ L + + A+ L+K SSG A +
Sbjct: 391 KNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVY 450
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +I+ LC RR + + G+ ++ T NT+++GLC V A M
Sbjct: 451 NTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIM 510
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +P+ +T+ +++ FC++GD E A ++ M CEP+ Y ++ G
Sbjct: 511 EGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGG 561
Score = 77.8 bits (190), Expect = 7e-15, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++++ ++AA +++ P V FN+L + +K+ A+ + + + G
Sbjct: 348 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 407
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD +T +I+I+ LC+ RR L +L + +G NT+++GLC + A
Sbjct: 408 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 467
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
ME G +S T+ +I+G CK E A M M+ +P+ YN+++
Sbjct: 468 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 524
Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 69/146 (47%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FNSL R + A+ ++ G PD+YT N +I+ +C L + +L +
Sbjct: 275 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 334
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
P T T NT+++ LC EN + +A R + + G P+ TF +I G C + +
Sbjct: 335 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 394
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A+ M + C+P+ Y+ ++D
Sbjct: 395 IAMEMFEEMKNKGCKPDEFTYSILID 420
Score = 75.1 bits (183), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + L + A+ QM+ P +N+L + + + AA L + S G
Sbjct: 313 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 372
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N +I LC + + + + G +P T + +++ LC E + A+
Sbjct: 373 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 432
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ME++G N+ + +I+G CK E A M ++V YN ++DG
Sbjct: 433 MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 491
Score = 73.9 bits (180), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 70/150 (46%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V FN L + + AI +++ + G+ PD T ++ L +
Sbjct: 167 VSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKK 226
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G T ++ +VNG C E V A+ F + G+ P+ TF +++NGFC+IG
Sbjct: 227 QMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG 286
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ A+ + M+E+ +P+ YN+++ G
Sbjct: 287 NVNDALDIVDFMIEKGFDPDVYTYNSLISG 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ + G +PD T N ++N C + L ++ + + G P T N++++
Sbjct: 256 ALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLIS 315
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G+C A+ + M PN+ T+ +I+ CK + E+A R +V + P
Sbjct: 316 GMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLP 375
Query: 204 NAVVYNAIMDG 214
+ +N ++ G
Sbjct: 376 DVCTFNTLIQG 386
Score = 61.2 bits (147), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 85 ISLIKRAHS----SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNT 140
+ L++ HS G+ D+ T N++I LC + + +L + GL+P T T
Sbjct: 148 LKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTT 207
Query: 141 IVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH 200
++ G E ++ A+ + M G + + ++NGFCK G E A+ + + E
Sbjct: 208 LMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEG 267
Query: 201 CEPNAVVYNAIMDG 214
P+ V +N++++G
Sbjct: 268 FSPDQVTFNSLVNG 281
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 83/180 (46%), Gaps = 6/180 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKRAH 92
L++S+ + L A+ +M ++ C ++ +N+L + +++ A + +
Sbjct: 418 LIDSLCYERRLKEALMLLKEMESSG---CARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 474
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
GV+ T N +I+ LC +R ++ + GL+P T N+++ C ++
Sbjct: 475 LLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIE 534
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A + M + G +P+ +T+G +I G C+ G + A +R++ + YN ++
Sbjct: 535 KAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVI 594
Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + K ++ A QM+ P +NSL T+ R A +++ S+G
Sbjct: 488 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 547
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI+T +I LC R +L V G+ T N ++ L + +
Sbjct: 548 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGM 607
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGD-TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M P++ T + G C G + A+ M+E+ P + + +G
Sbjct: 608 RLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEG 667
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 2/145 (1%)
Query: 70 SLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT 129
+L + ++ + + +L+K+ SSG P+ T +I + L +L +
Sbjct: 69 TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NEL 126
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G +P T N +N L +N + M N G + TF +I CK A
Sbjct: 127 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 186
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
+L + M +P+ + + +M G
Sbjct: 187 ILMLEEMANHGLKPDEITFTTLMQG 211
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 70/179 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + ++ A F QM +N+L + + K A L+ + G
Sbjct: 453 LIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG 512
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD +T N ++ C + ++ + G P T T++ GLC V A
Sbjct: 513 LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVAS 572
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R ++ G + + +I T+ + R M+E+ P+A+ + + G
Sbjct: 573 KLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRG 631
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D A F +M + N P +NSL + +++ I H G
Sbjct: 199 MINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRG 258
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+I T N +++ LC + +++L + G+RP T +V+GLC + A
Sbjct: 259 QPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQ 318
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ + N GYQ ++ + +ING CK G + A+ + M + C P+ V Y
Sbjct: 319 EVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTY 371
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A F+ + P V+ + + + + K A +L K HS
Sbjct: 164 LMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKN 223
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD N +I+ LC RR +G + G T N++++GLC + V A+
Sbjct: 224 MVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAI 283
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T ++N G +PN YT+ +++G CK G A ++++ + + +A +Y +++G
Sbjct: 284 TLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMING 342
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 14/185 (7%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSL------FTFVARTKHYA--------AAISLIK 89
K + + +M+ +P V +N+L F ++ K Y A+ L+
Sbjct: 53 KLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLN 112
Query: 90 RAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLEN 149
+ S V P+I T +++ LC +VL ++ K + P T N++++G L
Sbjct: 113 QMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVK 172
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
V A + G PN ++ +ING CK + A + M ++ P+ V YN
Sbjct: 173 EVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYN 232
Query: 210 AIMDG 214
+++DG
Sbjct: 233 SLIDG 237
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV------------- 142
V PD+ N +I+ LC + + G + + + P T NT++
Sbjct: 35 VKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRK 94
Query: 143 -NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
G + + AV M + PN TF +++G CK G+ + A + M+++
Sbjct: 95 EYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRV 154
Query: 202 EPNAVVYNAIMDG 214
EPN V YN++MDG
Sbjct: 155 EPNIVTYNSLMDG 167
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 66/159 (41%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ P + +NSL K A L G+ P++ + ++IN LC +
Sbjct: 149 MIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKM 208
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
++ + + P T N++++GLC + F M + G N T+ +
Sbjct: 209 VDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNS 268
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++G CK + A+ + + + PN Y ++DG
Sbjct: 269 LLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDG 307
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +K DAA+ F +M P V +NSL + ++ + A+ L+ H G
Sbjct: 202 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 261
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T + +++ LC +++L + GL+P T ++NGLC A
Sbjct: 262 QPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQ 321
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY N T+ +I+ FC G A+ + M E C PNAV Y I+
Sbjct: 322 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIII 378
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G ++ TL+I+IN L + SVL +FK G P TL +++ GLCL+ +
Sbjct: 4 NGFVSNLVTLSILINSFSQLGQNPLSFSVLAKIFKKGYDPDAITLTSLIKGLCLKGQIHQ 63
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN------AVV 207
A+ F + G++ N ++G +ING CK+G T +A+ +R + + +P+ V
Sbjct: 64 ALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVT 123
Query: 208 YNAIMDG 214
Y+A++ G
Sbjct: 124 YSALISG 130
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 53 FHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSS------GVAPDIYTLNI 105
FH LAA F + +L + + AA+ L++R G++P++ T +
Sbjct: 67 FHDKLAALGFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVTYSA 126
Query: 106 VINCLCHLR-----RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
+I+ C L + +V + K G +P T +++++G CL V A + +
Sbjct: 127 LISGFCILAFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNN 186
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P+ ++ +INGFCKI T++A+ M R PN V YN+++DG
Sbjct: 187 MAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDG 240
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P V ++SL K A S+ GV PDI + NI+IN C
Sbjct: 149 FAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCK 208
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
++ T +++ + + P T N++++GLC ++ A+ M + G P+ T
Sbjct: 209 IKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 268
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++++ CK + A+ + + ++ +PN Y +++G
Sbjct: 269 YSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILING 310
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 61/151 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +M P + ++SL + + H AI+L+ + G+ P++YT I+IN
Sbjct: 250 ALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILIN 309
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R ++ + G T +++ C A+ ME G P
Sbjct: 310 GLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIP 369
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
N+ T+ II + + A + M+ R
Sbjct: 370 NAVTYEIIIRSLFDKDENDKAEKLLLEMITR 400
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K ++ A + +M+A V +N+L + + AI L + +
Sbjct: 5 IIDSLCKYKLVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMTAEN 64
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+++ C R +VL ++ K ++P T +++++G CL N V A
Sbjct: 65 INPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEVNKAK 124
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G N ++ +INGFCKI + A+ M R N ++Y+ ++DG
Sbjct: 125 EIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNVLIYSFLIDG 183
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 44 KTLDAAVAFFHQMLAA-NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+TL AF +M + P + + L V TK+ A L+ G PD +
Sbjct: 212 RTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFL 271
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N ++ C L R + + V + + G+ P T NT++ GL V+ A R M
Sbjct: 272 YNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMA 331
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ P+ T+ +++NG C+ G+T +A+ + M + C PN YN ++ G
Sbjct: 332 EKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHG 383
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG-LVFKTGLRPTTATLNTIV 142
A+ LIK S +PDIY+ N ++ LC R + + + + K ++P T ++
Sbjct: 182 AVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILI 241
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+ +C N+ A +E G++P+ + + I+ G+C + A+ M E+ E
Sbjct: 242 DNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVE 301
Query: 203 PNAVVYNAIMDG 214
P+ + YN ++ G
Sbjct: 302 PDLITYNTLIFG 313
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 82 AAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTI 141
+ AI + R GV PD+ T N +I L R + +L ++ + G P T ++
Sbjct: 286 SEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSL 345
Query: 142 VNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+NG+C + +A+ ME G PN+ T+ +++G CK
Sbjct: 346 MNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCK 386
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 69/163 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +++M P + +N+L ++++ + A L++ G PD T ++N
Sbjct: 288 AIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMN 347
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
+C T L++L + G P T T NT+++GLC A+ M++ G +
Sbjct: 348 GMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKL 407
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ ++ + C +G A VE + Y+ +
Sbjct: 408 DMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTL 450
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +K DAA+ F +M P V +NSL + ++ + A+ L+ H G
Sbjct: 67 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 126
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T + +++ LC +++L + GL+P T ++NGLC A
Sbjct: 127 QPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQ 186
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY N T+ +I+ FC G A+ + M E C PNAV Y I+
Sbjct: 187 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIII 243
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P V ++SL K A S+ GV PDI + NI+IN C
Sbjct: 14 FAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCK 73
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
++ T +++ + + P T N++++GLC ++ A+ M + G P+ T
Sbjct: 74 IKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 133
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++++ CK + A+ + + ++ +PN Y +++G
Sbjct: 134 YSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILING 175
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C + +V + K G +P T +++++G CL V A + +M G P+
Sbjct: 2 CKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDI 61
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ +INGFCKI T++A+ M R PN V YN+++DG
Sbjct: 62 QSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDG 105
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LN SL+ LD ++M P V LF + R Y SL K G
Sbjct: 227 FLNVGMSLEALD----ILNRMRDVGVRPSVTAMTILFKLLFRVGDYGTIWSLFKDMIRKG 282
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
AP T N +I C + G S+ L+ K G P T N I+NG C+ N + AV
Sbjct: 283 PAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGCCVGGNTSVAV 342
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ R M G +P+ TF I++ C+ G+ A ++ PN +YN +MDG
Sbjct: 343 GWLRLMMKRGCEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNTAIYNTMMDG 401
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+ F M+ P P FN++ R SL G PD++T N++IN
Sbjct: 273 SLFKDMIRKGPAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGC 332
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C T+ + L L+ K G P+ +T NTI++ LC E NV A + G PN+
Sbjct: 333 CVGGNTSVAVGWLRLMMKRGCEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNT 392
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +++G+ K D A L + M + P+ V +N + G
Sbjct: 393 AIYNTMMDGYVKARDIGRASLLYKEMRIKGVPPDCVTFNIFVGG 436
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L + + +D A + +M +P V F++L +++ + A + S G
Sbjct: 573 LFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIG 632
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+ + N +I C+L R A L V + GL P T T N I++ C + N+ SA+
Sbjct: 633 FVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAI 692
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P+ +TF ++ G+CK D A + M P+ YN M G
Sbjct: 693 DAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNIRMHG 751
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + +D A F +ML+ P +NSL A A+ + K G
Sbjct: 608 LIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRG 667
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD +T NI+I+ C + + + GL P T N +V G C ++ A
Sbjct: 668 LLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRAD 727
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P+ T+ ++G+C + A+ + +V PN V YN +M G
Sbjct: 728 DIVNKMYPYGLYPDITTYNIRMHGYCSVRKMNRAIAILDELVSAGIVPNTVTYNTVMGG 786
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ +A+ F M P + FN L + A ++ + + G+ PDI T NI
Sbjct: 688 MKSAIDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNI 747
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ C +R+ +++L + G+ P T T NT++ G+C + + A+ T + G
Sbjct: 748 RMHGYCSVRKMNRAIAILDELVSAGIVPNTVTYNTVMGGIC-SDILDRAMIVTAKLIKMG 806
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
+ PN T +++ FCK G E A+L + +
Sbjct: 807 FIPNVITTNILLSHFCKQGMPERALLWGQKL 837
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 64/169 (37%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A+ LA V FNSL +R A + G P T N
Sbjct: 478 LDQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNS 537
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ LC + ++L + + G + +G N++ A + M+ G
Sbjct: 538 LLMGLCRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERG 597
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ F A+I+G K G+ + A M+ PN YN+++ G
Sbjct: 598 IYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGG 646
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D AV F ++ N P +NSL + ++ + LI H+ G
Sbjct: 239 MINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIG 298
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ T N +++ LC + +++L + G++P T +V+GLC + A
Sbjct: 299 QPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQ 358
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+++ GY + + ++NG CK G + A+ + M + C PNAV Y ++
Sbjct: 359 VVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPNAVTYETLI 415
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 89/179 (49%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A F+ + + P V+ ++ + + + K A++L K
Sbjct: 204 LMDGYFLVKEVNKATYVFNTIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKN 263
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+APD T N +I+ LC R + ++ + G T N++++ LC + V A+
Sbjct: 264 MAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAI 323
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T +++ G QPN YT+ +++G CK G + A + +N++ + + +Y+ +++G
Sbjct: 324 TLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNG 382
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K + A A +M+ FP V + +L + A+ L+ + ++ D+ T
Sbjct: 107 KLIIDASALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTF 166
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +++ LC +VL ++ K G+ P T ++++G L V A +
Sbjct: 167 NTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIAR 226
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+G P+ ++ +ING CK + AV + + ++ P+ + YN+++DG
Sbjct: 227 SGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDG 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 48/168 (28%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ D+ +I+INC CHL + SVL + K G P T TL T++ G+CL V A
Sbjct: 5 GIQTDVVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQVRKA 64
Query: 155 VTFTRHMENAGYQ----------------------------------------------- 167
+ F H+ G++
Sbjct: 65 LHFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCSLCKNKLIIDASALCSEMIVKRI 124
Query: 168 -PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ +I+GFC +G + AV + M+ ++ + +N ++DG
Sbjct: 125 FPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDG 172
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + + AI+L+ + G+ P++YT I+++ LC R V +
Sbjct: 306 YNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLL 365
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G + +VNGLC E A++ ME+ PN+ T+ +I + G +
Sbjct: 366 IKGYHLDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPNAVTYETLIRALFENGKND 425
Query: 188 SAVLCMRNMVER 199
V +R M+ R
Sbjct: 426 KTVKLLREMIVR 437
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLNS+ LD +++ + +M++ N P + +N+L + + +I L+ +
Sbjct: 361 LLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTN 420
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P + T NIVIN L +R + G + + G+ P T T+V GLC AV
Sbjct: 421 CSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAV 480
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G + Y + +I G C+ +SA+ + MV+ C+P+ +Y ++
Sbjct: 481 EIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYTLL 537
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ M P + +NSL F ++ +Y +I S G+ P++ T NI+I+
Sbjct: 269 ALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIH 328
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L + +L ++ +T + PT T N ++N LC + +++ M + P
Sbjct: 329 SLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSP 388
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ ++N CK G + ++ + ++ +C P V YN +++G
Sbjct: 389 DIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVING 434
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 73/178 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L+ + + +D + M+ + P FN++ + + H +A+ ++ S
Sbjct: 150 NLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLS 209
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PD T N +I C+ +S + G P T +V +C + A
Sbjct: 210 GCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRA 269
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G P+ + +++N K G+ + L + N++ +PN V YN ++
Sbjct: 270 LEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILI 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
+L+ P V +N L ++ + ++K + + ++P + T NI++N LC
Sbjct: 311 LLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGF 370
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+S+ + P T NT++N LC E + ++ + P T+
Sbjct: 371 LDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNI 430
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ING ++ +SA MVE+ +P+ + + ++ G
Sbjct: 431 VINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWG 469
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L S+ S L AA M + P +L + R ++ SG
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSG 175
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD T N VI LC L L + +G P T NTI+ + + + AV
Sbjct: 176 GVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAV 235
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+F + G+ P T+ ++ CK A+ + +M C P+ +YN++++
Sbjct: 236 SFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVN 293
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 68/168 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F M + P K +N++ + A+S K G P + T +
Sbjct: 196 LKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYAL 255
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ +C + L VL + + G P N++VN + N ++ + G
Sbjct: 256 LVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHG 315
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
QPN T+ +I+ G ++ ++ M E P V YN +++
Sbjct: 316 MQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLN 363
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLNS+ LD +++ + +M++ N P + +N+L + + +I L+ +
Sbjct: 361 LLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTN 420
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P + T NIVIN L +R + G + + G+ P T T+V GLC AV
Sbjct: 421 CSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAV 480
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G + Y + +I G C+ +SA+ + MV+ C+P+ +Y ++
Sbjct: 481 EIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYTLL 537
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ M P + +NSL F ++ +Y +I S G+ P++ T NI+I+
Sbjct: 269 ALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIH 328
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L + +L ++ +T + PT T N ++N LC + +++ M + P
Sbjct: 329 SLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSP 388
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ ++N CK G + ++ + ++ +C P V YN +++G
Sbjct: 389 DIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVING 434
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 73/178 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L+ + + +D + M+ + P FN++ + + H +A+ ++ S
Sbjct: 150 NLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLS 209
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PD T N +I C+ +S + G P T +V +C + A
Sbjct: 210 GCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRA 269
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M G P+ + +++N K G+ + L + N++ +PN V YN ++
Sbjct: 270 LEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILI 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
+L+ P V +N L ++ + ++K + + ++P + T NI++N LC
Sbjct: 311 LLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGF 370
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+S+ + P T NT++N LC E + ++ + P T+
Sbjct: 371 LDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNI 430
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ING ++ +SA MVE+ +P+ + + ++ G
Sbjct: 431 VINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWG 469
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L S+ S L AA M + P +L + R ++ SG
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSG 175
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD T N VI LC L L + +G P T NTI+ + + + AV
Sbjct: 176 GVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAV 235
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+F + G+ P T+ ++ CK A+ + +M C P+ +YN++++
Sbjct: 236 SFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVN 293
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 68/168 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F M + P K +N++ + A+S K G P + T +
Sbjct: 196 LKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYAL 255
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ +C + L VL + + G P N++VN + N ++ + G
Sbjct: 256 LVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHG 315
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
QPN T+ +I+ G ++ ++ M E P V YN +++
Sbjct: 316 MQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLN 363
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S R +A F++ML P + F+S+ +R A++ ++ G
Sbjct: 350 LVESCRKEDVWEAE-RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 408
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD I+IN C + L + + + G T NT++NGLC + A
Sbjct: 409 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 468
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M G P+ YT +I+G+CK G+ A+ M R +P+ V YN +MDG
Sbjct: 469 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 527
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 41/217 (18%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFV---ARTKHYAAAISLIKRAH 92
LLN + K LD A F +M+ FP DF +L T + + + A+SL +
Sbjct: 454 LLNGLCRGKMLDDADELFKEMVERGVFP---DFYTLTTLIHGYCKDGNMTKALSLFETMT 510
Query: 93 SSGVAPDIYTLNIVINCLCH--------------LRRTAF-----------GLSVLGLVF 127
+ PD+ T N +++ C + R F G LGLV
Sbjct: 511 LRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVS 570
Query: 128 K----------TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAII 177
+ G++PT T NTI+ G N++ A F M + G P+ T+ +I
Sbjct: 571 EAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLI 630
Query: 178 NGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N F K + + A + NM ER PN V YNAI+ G
Sbjct: 631 NSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGG 667
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Query: 64 CVKD---FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGL 120
CV D +N+L + R K A L K GV PD YTL +I+ C L
Sbjct: 444 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 503
Query: 121 SVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
S+ + L+P T NT+++G C + A M + P+ +F +INGF
Sbjct: 504 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGF 563
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C +G A M E+ +P V N I+ G
Sbjct: 564 CSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 597
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + ++ A ++ M++ FP F+ L + A L G
Sbjct: 524 LMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG 583
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P + T N +I + L + G+ P T NT++N E N A
Sbjct: 584 IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 643
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ME G PN T+ AI+ GF + G + A + + M+++ P+ Y ++++G
Sbjct: 644 FLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING 702
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
N+L + + A + + SG ++YTLNI++N LC + L + +
Sbjct: 207 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 266
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
G+ T NT+VN C V+ A M G +P +T+ A+ING CK G E
Sbjct: 267 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYER 326
Query: 189 AVLCMRNMVERHCEPNAVVYNAIM 212
A + M+ PNA +N ++
Sbjct: 327 AKRVLDEMLGVGLCPNAATFNPML 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N++ LD + +M + + +N+L R + A L+ G
Sbjct: 244 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 303
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV---- 151
+ P ++T N +IN LC VL + GL P AT N ++ C + +V
Sbjct: 304 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 363
Query: 152 -------------------------------ASAVTFTRHMENAGYQPNSYTFGAIINGF 180
A+ + M+ G P++ + +ING+
Sbjct: 364 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 423
Query: 181 CKIGDTESAVLCMRN-MVERHCEPNAVVYNAIMDG 214
C+ D S L MRN MVER C + V YN +++G
Sbjct: 424 CR-NDDVSGALKMRNEMVERGCVMDVVTYNTLLNG 457
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHY-AAAISLIKRAHSSGVAPDIYTLNI 105
D A+ F+ ML N P K N + + ++Y A L K AH GV PD + NI
Sbjct: 128 DKALNTFYIMLQFNIKPLTKHLNRILDILVSHRNYLRPAFDLFKDAHKHGVFPDTKSYNI 187
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ C + ++ +FK + P + ++ LC ++ V AV M N G
Sbjct: 188 LMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKG 247
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P+S+T+ ++N C+ A + M + C P+ V YN ++ G
Sbjct: 248 FVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILG 296
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Query: 47 DAAVAF--FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
D ++A+ F++M + P ++ + L + R A+ L + + G PD +T
Sbjct: 197 DISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYT 256
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
++N LC ++ +L + G P NT++ G C E A M+
Sbjct: 257 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQAN 316
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G PN ++ ++NG C +G + A + M+ + P+ V +A++ G
Sbjct: 317 GCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKG 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ ++ AV F ML P + +L + R K A L+ R G
Sbjct: 223 LMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKG 282
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI N VI C R V+ + G P + T+VNGLC + A
Sbjct: 283 CNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEAT 342
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M + G+ P+ A++ GFC +G E A + +E P+ + I+
Sbjct: 343 KYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIV 399
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 82.4 bits (202), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 79/166 (47%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F++ML P + +L + A S+ + G+ P++ T + +
Sbjct: 401 AREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC +L + + GL+P T NTIVNGLC N+ V M+ AG+ P
Sbjct: 461 GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ T+ +++ +CK+G+ A +R M+ + +P V +N +M+G
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNG 566
Score = 81.3 bits (199), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 69/172 (40%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
L + AA F +M P + + S+ + ++ A + G+ PD T
Sbjct: 360 LGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVT 419
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+I+ C SV + + GL P T + +GLC + A M
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G QPN YT+ I+NG CKIG+ E V M M P+ + Y +MD
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Score = 75.9 bits (185), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A + +QM+ P V + +L + + A L+ G+ P++YT N
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N LC + + ++ + G P T T T+++ C +A A R M N
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
QP TF ++NGFC G E + M+E+ PNA +N++M
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599
Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + + ++ V +M A +P + +L + A A L++ +
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P + T N+++N C G ++ + + G+ P T N+++ C++NN+ +
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M + G P+S T+ +I G CK + + A + MVE+ A Y+A++ G
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRG 671
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ + + A L++ GV PD VI+ C L + + +
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ + P T ++++G+C + A M G +P+ T+ A+I+G+CK G+ +
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMK 434
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A MV++ PN V Y A+ DG
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADG 461
Score = 69.3 bits (168), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A H+M P V +N++ + + + + L++ +G PD T
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + A +L ++ L+PT T N ++NG C+ + M G
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ TF +++ +C + + + M +R P++ YN ++ G
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636
Score = 67.8 bits (164), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 65/153 (42%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
FP + ++ + + + +AA L + PDI T VI+ +C +
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEARE 403
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+ + GL P T +++G C + A + M G PN T+ A+ +G C
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
K G+ + A + M + +PN YN I++G
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNG 496
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 42/205 (20%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVART----KHYAAAISLIKRAHSSGVAPDIYTLN 104
A FH++L + V +S F++R + A+ + + GV + + N
Sbjct: 190 AQKLFHKLLR---YGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCN 246
Query: 105 IVINCLCHLR--RTAFGL------------------------------SVLGLVFK---T 129
IV++CLC L R A L VL LV +
Sbjct: 247 IVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGK 306
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
GL+P N I+ LC V A R M G P++ + +I+GFCK+G+ +A
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M + P+ V Y +++ G
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHG 391
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 82.0 bits (201), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 79/169 (46%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ +M FP FN L + + + + A L+ G P+ T N
Sbjct: 226 IDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNS 285
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC + +S+L + P T T+V+G V +E G
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
Y+ N +++ ++I+G K G E + + MVE+ C+PN +VY+A++DG
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDG 394
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVK----DFNSLFTFVARTKHYAAAISLIKRA 91
+LN + D A+ F++ ++ +N F ++ FN + + R + A+ + +
Sbjct: 142 VLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGM 201
Query: 92 HSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
D YT + +++ LC+ R +S+L + G P N +++ LC + ++
Sbjct: 202 SDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDL 261
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ A +M G PN T+ ++++G C G + A+ + MV C PN + + +
Sbjct: 262 SRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTL 321
Query: 212 MDG 214
+DG
Sbjct: 322 VDG 324
Score = 68.6 bits (166), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 81/169 (47%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A++ ++M+A P F +L + + ++ G + ++ +
Sbjct: 296 LDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSS 355
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ L + G+ + + + G +P T + +++GLC E A + M+N G
Sbjct: 356 LISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKG 415
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ PNS+T+ +++ G+ + GD A+L + M + C + V Y+ +++G
Sbjct: 416 HTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILING 464
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 81.6 bits (200), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 35/186 (18%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +N+L V + + A L+ GV P++ + + VI+CL + L+V
Sbjct: 242 PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAV 301
Query: 123 LGLVFKTGLRPTTATL-----------------------------------NTIVNGLCL 147
G +F G RP T NT+++GLC
Sbjct: 302 FGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCS 361
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVV 207
+ N+ A++ ME +PN T+ II GF K GD SA M+ C PN VV
Sbjct: 362 DGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVV 421
Query: 208 YNAIMD 213
Y ++D
Sbjct: 422 YTCMVD 427
Score = 67.8 bits (164), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHSS 94
+++ + + ++ ++A F +M P V+ F SL F R + A+ L
Sbjct: 285 VISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGR-VGDAVGLWNLMIRE 343
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV+P++ N +I+ LC +SV + K +RP T +TI+ G ++ SA
Sbjct: 344 GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSA 403
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M N G +PN + +++ C++ + A + NM+ C P + +N + G
Sbjct: 404 CETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKG 463
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 78/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + S +D A++ ++QM + P V ++++ A++ +A + + G
Sbjct: 355 LIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG 414
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P++ +++ LC + ++ + G PT T N + GLC V A+
Sbjct: 415 CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAM 474
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME PN T+ +++G + A +R + ER E + V YN IM G
Sbjct: 475 NVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYG 533
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVA----RTKHYAAAISLIKRAHSSGVAPDIYTLN 104
V++ Q + PC ++ LF FV R+ + + R G P + N
Sbjct: 92 GVSYLLQQMKLENVPCSQE---LFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYN 148
Query: 105 IVINCLCHLRRTAFGL--SVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+V++ L L + F + ++ + GL P T N ++ LC V A M
Sbjct: 149 LVLDAL--LSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMS 206
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N G P+ ++ +I+ CK+GD + A R + + EP VYNA++ G
Sbjct: 207 NKGCDPDDVSYTTVISSMCKLGDVDKA----RELAMKF-EPVVPVYNALIHG 253
Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P VK +N + + + +L S G+ P+++T N+++ LC + +
Sbjct: 142 PSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKL 201
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + G P + T+++ +C +V A E P + A+I+G CK
Sbjct: 202 LVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFE-----PVVPVYNALIHGVCK 256
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ A M MV+R +PN + Y+ ++
Sbjct: 257 ECRFKEAFDLMNEMVDRGVDPNVISYSTVI 286
Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 5/179 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L+++ S A ++ M + P V +N L + + A L+ + G
Sbjct: 150 VLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKG 209
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD + VI+ +C L L + F+ P N +++G+C E A
Sbjct: 210 CDPDDVSYTTVISSMCKLGDVDKARE-LAMKFE----PVVPVYNALIHGVCKECRFKEAF 264
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G PN ++ +I+ +G+ E ++ M R C PN + +++ G
Sbjct: 265 DLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKG 323
Score = 54.3 bits (129), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 1/167 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ QM P ++ +N L + R + A LI+ V D T N ++
Sbjct: 473 AMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMY 532
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME-NAGYQ 167
L +LG + G++ T T+NT VN C V +A+ ++ ++
Sbjct: 533 GFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFR 592
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T I+ G C TE AV+ + M++R PN +N ++ G
Sbjct: 593 ADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRG 639
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K+L + F H L + ++ + R L+++
Sbjct: 54 IVSSLEYFKSLSNSGTFKHTHLT---------YETMIDKLGRNNEMDGVSYLLQQMKLEN 104
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT---GLRPTTATLNTIVNGLCLENNVA 152
V VI C RR+ G L + ++ G P+ N +++ L +N
Sbjct: 105 VPCSQELFQFVIKCY---RRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFK 161
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+M++ G +PN +T+ ++ C+ G + A + M + C+P+ V Y ++
Sbjct: 162 MINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVI 221
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L A F +M AN P V +N+L + + I L + +
Sbjct: 297 LINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNK 356
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V DI T N +I LC +T ++ + K L P +T + ++ G C+ NN A
Sbjct: 357 VKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAF 416
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M +G+ PN TF + + FCK D + AV +R+M+ER P++ + + + G
Sbjct: 417 LVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSG 475
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L + + L A F +M FP V+ N+ + + K +S ++ +
Sbjct: 156 LFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNR 215
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++P++YT+N+V++ C L VL + GL P T N++++G C + + A+
Sbjct: 216 ISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLAL 275
Query: 156 TFTR-HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G PN TF +INGFCK G A M + PN V YN +++G
Sbjct: 276 KVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLING 335
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+S+ LK + V+F+ QM P V N + + + A ++++ G
Sbjct: 191 FLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMG 250
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF-KTGLRPTTATLNTIVNGLCLENNVASA 154
+ P++ T N +I+ C L V L+ K G+ P T NT++NG C E + A
Sbjct: 251 LCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEA 310
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ A PN T+ +INGF + G++E + M + + + YN ++ G
Sbjct: 311 NRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILG 370
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
FP V FN+L + A + + VAP++ T N +IN + G+
Sbjct: 288 FPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIG 347
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+ + + ++ T N ++ GLC E A + ++ PN+ TF A+I G C
Sbjct: 348 LFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQC 407
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
++E A L R+MV PN + +
Sbjct: 408 VRNNSERAFLVYRSMVRSGFSPNENTFRML 437
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+ H N P V F++LF A A + G P + + N ++ +
Sbjct: 138 SLLHSYTLCNSSPLV--FDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSM 195
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
+L+R +S + + + P T+N +V+ C + A M++ G PN
Sbjct: 196 LYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNV 255
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERH-CEPNAVVYNAIMDG 214
TF ++I+G+C G A+ M+ ++ PN V +N +++G
Sbjct: 256 VTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLING 300
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 81.6 bits (200), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 75/152 (49%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN+L + R+K+ L S ++PD++T + +IN LC R +
Sbjct: 259 PSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGL 318
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + GL P T T+++G C + A+ M++ G +P+ T+ A+ING C+
Sbjct: 319 FDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCR 378
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GD + A + M+ +P+ + + +MDG
Sbjct: 379 DGDLKEARKLLNEMIGNGFKPDKITFTTLMDG 410
Score = 75.5 bits (184), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G P++Y NI+++ C + V + + GLRP+ + NT+++G C NV
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME+ P+ +T+ A+ING CK E A M E PN V + ++DG
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
F+ ++L P V FN L + A + G+ P + + N +I+ C
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ G + ++ + P T + ++NGLC E+ V A M G PN
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +I+G CK G + A+ M +R P+ + YNA+++G
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALING 375
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 75/179 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + L A ++M+ P F +L + +A+ + R G
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D +I+ LC R +L + G +P T +++ C + +V
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGA 491
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+ G P T+ A++NGFCK G ++A + + M+ PN + +N ++DG
Sbjct: 492 KLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDG 550
Score = 65.1 bits (157), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ F M P + +N+L + R A L+ +G PD T
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTT 406
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C L + + + G+ +++GLC + V A + M +AG
Sbjct: 407 LMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAG 466
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++P+ T+ +I+ FCK GD + ++ M P V YNA+M+G
Sbjct: 467 HKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNG 515
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F +L + + R A ++K S+G PD T +VI+C C G +L +
Sbjct: 439 FTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQ 498
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
+ G P T N ++NG C + + +A M N PN TF +++G CK G +
Sbjct: 499 RDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSS 557
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F +++ P N L + R A L+ S G +PD+ T N +I+
Sbjct: 197 AVDLFWELVRLRYCPVTYTINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIH 256
Query: 109 CLCHLRRTAFGLSVLGLVFKTG-LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
C + S L V G + P + TI++G C + + A + M +G
Sbjct: 257 GFCRISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTM 316
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN++TF A+I+GF K+GD S++ M+ R C P+ V + ++++G
Sbjct: 317 PNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLING 363
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 77/173 (44%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
L + A + F +M+ + P FN+L + A+++++ + G PD+
Sbjct: 296 KLSRMKEASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVV 355
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T +IN + + L + + + + T + +VNG C N + A +
Sbjct: 356 TFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRL 415
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + P S+ + +I+G+CK G+ + A + M E C+P+ + Y ++ G
Sbjct: 416 KQSDVVPQSFVYNPVIDGYCKSGNVDEANKILAEMEENRCKPDKLTYTILIIG 468
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ L + +++A +H+ML P V F SL A+ + +S
Sbjct: 325 LIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRK 384
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
VA +YT ++++N C R +L + ++ + P + N +++G C NV A
Sbjct: 385 VAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNPVIDGYCKSGNVDEAN 444
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
ME +P+ T+ +I G C G A+ M+ C P+ + N
Sbjct: 445 KILAEMEENRCKPDKLTYTILIIGHCSKGRMAEAIGIFDKMLAVCCAPDEITIN 498
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 43 LKTLDAAVAFFHQM-LAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
+ +D A +F +++ L P V + ++ + + A SL SG P+ +
Sbjct: 261 ISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTMPNAF 320
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T N +I+ L A L++ + G P T +++NG + V A+ M
Sbjct: 321 TFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEM 380
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + YTF ++NGFCK A + + + P + VYN ++DG
Sbjct: 381 NSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNPVIDG 433
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 60/147 (40%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + T H+ +A + G PD + L +++ + R +L V
Sbjct: 111 YNMLLRSLCETNHHRSAKLVYDWMRFDGQVPDSWLLGFLVSSYALIGRFDVSKELLVDVQ 170
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ N + N L ++N AV + Y P +YT ++ G C+ G+ +
Sbjct: 171 CNNVGVNVVVYNDLFNILIIKNKAREAVDLFWELVRLRYCPVTYTINILMRGLCRAGEID 230
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + ++ C P+ + YN I+ G
Sbjct: 231 EACKLLGDLRSFGCSPDVITYNTIIHG 257
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 81.3 bits (199), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 80/180 (44%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L++ + +D A+ F QM FP V + L A+ + +
Sbjct: 265 NLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVEN 324
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ P++YT ++I+ C + + G+ +L + + GL + N +++G C + A
Sbjct: 325 GIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDA 384
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+ PNS T+ +I GFC+ + A+ + M E PN V YN ++ G
Sbjct: 385 ICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHG 444
Score = 77.4 bits (189), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 76/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D + ML V FN+L + AI ++ + V P+ T N
Sbjct: 346 MDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNE 405
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C + +++L +++ L P T NT+++GLC V SA M G
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P+ TF A I+ CK+G E A ++ E+H E N +Y A++DG
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514
Score = 72.0 bits (175), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 76/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ M P + +N L R K A++L+ + + + ++P++ T N
Sbjct: 381 MEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNT 440
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC R + L+ K G P T ++ LC V A ++
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH 500
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N + + A+I+G+CK A L + M+ C PN++ +N ++DG
Sbjct: 501 AEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDG 549
Score = 53.1 bits (126), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 35/204 (17%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K++D A+A ++M P + +N+L + + + +A L G PD T
Sbjct: 414 KSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473
Query: 104 NIVINCLCHLRRT-------------------------------AFGLSVLGLVFK---- 128
I+CLC + + A S L+FK
Sbjct: 474 CAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLF 533
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
G P + T N +++GL E V A++ M +P +T+ +I + D +
Sbjct: 534 EGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDR 593
Query: 189 AVLCMRNMVERHCEPNAVVYNAIM 212
A + + M+ C+PN V Y A +
Sbjct: 594 ANMFLDQMISSGCQPNVVTYTAFI 617
Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 62/148 (41%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V +N LF ++R L K + GV P++ + N ++N C + +
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ K G + T +++ G C + + A M G N ++ +I+GFC++G
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVG 274
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ A+ M E C P+ Y ++
Sbjct: 275 KIDEALELFFQMKEDGCFPDVPTYTVLV 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
F +ML FP FN L + + A+SL+ P ++T I+I +
Sbjct: 527 LFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEI- 585
Query: 112 HLRRTAFGLSVLGL--VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
LR + F + + L + +G +P T + C + + A ++ G +
Sbjct: 586 -LRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
S+ + ++N + IG +SA + M + CEP+ Y+ ++
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILL 687
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ I D A F QM+++ P V + + R A ++ + G
Sbjct: 581 LIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640
Query: 96 VAPDIYTLNIVIN---CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+ D + ++++N C+ L +AFG VL +F TG P+ T + ++ L E
Sbjct: 641 ILLDSFIYDVLVNAYGCIGQLD-SAFG--VLIRMFDTGCEPSRQTYSILLKHLIFEK--- 694
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ E G NS KI D E + MVE+ C PN Y+ ++
Sbjct: 695 ------YNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLI 748
Query: 213 DG 214
G
Sbjct: 749 KG 750
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 63/168 (37%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D F ML P + FN++ + + A + G D +T
Sbjct: 171 IDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTS 230
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C + V ++ + G + +++G C + A+ M+ G
Sbjct: 231 LILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG 290
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ T+ ++ FC++G A+ MVE EPN Y ++D
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLID 338
Score = 47.8 bits (112), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 56/117 (47%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + ++ A L KR G P+ T N++++ L + +S++ ++
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMG 567
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
K +PT T ++ + E++ A F M ++G QPN T+ A I +C+ G
Sbjct: 568 KFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG 624
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLF---TFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
A + QML P V +N+L V R K A+ L + + PDIYT NI
Sbjct: 138 AFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKE---AVGLFNQMLLKNIKPDIYTFNI 194
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC +VL ++ K + P T N++++G L A M G
Sbjct: 195 LVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRG 254
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +++ +ING CK + AV ++ M + PN V Y++++DG
Sbjct: 255 VTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDG 303
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 60 NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFG 119
NP P + +F +F + + H+ ISL + G+ D+ LNI++NC CHL +
Sbjct: 3 NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQ---- 58
Query: 120 LSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
+CL + V + F + G+Q N ++G +I+G
Sbjct: 59 -------------------------VCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDG 93
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
CK G+T +A+ +RN+ +PN V+Y+ I+
Sbjct: 94 LCKAGETRAAMQVLRNIDGLLVQPNVVMYSTII 126
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L AV F+QML N P + FN L + + A +++ V PD+ T N
Sbjct: 170 LKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNS 229
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ +++ V + + G+ P + + ++NGLC V AV + M +
Sbjct: 230 LMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKS 289
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN+ T+ ++I+G K G A + M R + + YN+++D
Sbjct: 290 MAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLD 337
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K + A F+ M P V ++ + + +TK A++L+K HS
Sbjct: 230 LMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKS 289
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+AP+ T + +I+ L R ++ + G T N++++ LC + V A+
Sbjct: 290 MAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAI 349
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
T +++ G QP+ YT+ +++G CK G + A
Sbjct: 350 TLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDA 383
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ + P V +NSL K A + GV PD+++ +++IN LC +
Sbjct: 215 MIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKM 274
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+++L + + P T T +++++GL + A M N G + T+ +
Sbjct: 275 VDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNS 334
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ CK + A+ + + ++ +P+ Y ++DG
Sbjct: 335 LLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDG 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D AV +M + + P ++SL + ++ A L+ H+ G
Sbjct: 265 MINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRG 324
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC--------- 146
D+ T N +++ LC + +++L + G++P T +V+GLC
Sbjct: 325 QPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQ 384
Query: 147 ------------LENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
L++ A++ ME+ G PN TF +I + + AV +R
Sbjct: 385 EVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLR 444
Query: 195 NMVER 199
M+ R
Sbjct: 445 EMIAR 449
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
A++ F +M+ N P V+ + SL + + A K++ G+ PDI N +I
Sbjct: 410 KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+ C +L + + P T NT++ G C E V A M+ G +
Sbjct: 470 DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIK 529
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ ++ +I+G+ K GD + A+ M+ +P + YNA++ G
Sbjct: 530 PDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQG 576
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 35/204 (17%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A A+ +M+ V +N L + K A +IK GV PD+ T NI
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTAT---------------------------- 137
IN C LS+ + + +RPT T
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 138 -------LNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
N +++G C+ N+ A + M+NA P+ TF ++ G+C+ E A
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517
Query: 191 LCMRNMVERHCEPNAVVYNAIMDG 214
+ M ER +P+ + YN ++ G
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISG 541
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ I T NI+IN LC + +G + G++P T NT++NG CL +A
Sbjct: 213 IKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAAS 272
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA--VLCMRNMVERHCEPNAVVYNAIMD 213
+ M++ +P+ YT+ + I+ CK E A VLC ++E PNAV YNA++D
Sbjct: 273 KIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLC--KLLESGLVPNAVTYNALID 330
Query: 214 G 214
G
Sbjct: 331 G 331
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 35/201 (17%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
A F M P V +N++ + AA + K + PD YT N I
Sbjct: 235 KAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFI 294
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC--------------------- 146
+ LC RR VL + ++GL P T N +++G C
Sbjct: 295 SRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIV 354
Query: 147 --------------LENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
LE + A + M G +P+ T+ ING+C+ G+ + A+
Sbjct: 355 ASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSL 414
Query: 193 MRNMVERHCEPNAVVYNAIMD 213
MVE++ P Y +++D
Sbjct: 415 FDEMVEKNIRPTVETYTSLID 435
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A F + + P + FN+L + A L+K ++ V PD T N
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ C R+ +L + + G++P + NT+++G ++ A+ M + G
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P T+ A+I G+ KIG+ + A +R M + P+ Y +++
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K ++ + T N ++N LC E A F HME G +PN T+ +ING+C G E
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIM 212
+A + M +++ +P+ YN+ +
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFI 294
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K + A+ F +M P V ++SL +++ + A++L+ H G
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRG 60
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI N +++ LC + +++L G++P+ T +++GLC + A
Sbjct: 61 QPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGERLEDAR 120
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY T+ +I+G C +G + A+ + M + C PN V Y I+
Sbjct: 121 NIFKDLLVKGYNITVNTYTDMIHGLCNMGLFDEALALLLEMKDNSCIPNVVTYEIII 177
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ ++M P + +NS+ + + AI+L+ + + G+ P +YT I+I+
Sbjct: 49 ALNLVNEMHDRGQPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILID 108
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC R ++ + G T T +++GLC A+ M++ P
Sbjct: 109 GLCKGERLEDARNIFKDLLVKGYNITVNTYTDMIHGLCNMGLFDEALALLLEMKDNSCIP 168
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
N T+ II + + A +R M+ R
Sbjct: 169 NVVTYEIIIRSLFDKDENDKAEKIIREMITR 199
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/109 (18%), Positives = 50/109 (45%)
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN C ++R +++ + + P T +++++G C ++ A+ M + G
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRG 60
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ + +I++ CK + A+ + + +P+ Y ++DG
Sbjct: 61 QPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDG 109
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ DI L+I+IN HL + + SVL + K G +P T TL T++ GLC+ N V A
Sbjct: 5 GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM-VERHCEPNAVV 207
+ F + G++ ++ ++G +ING CK G+T++ M +M + R C+ VV
Sbjct: 65 LHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVV 118
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 78/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K + A + +M+ FP V +N+L AI L
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ + NI+I+ LC G SVL ++ K ++P T +++++G L A
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G + ++ +ING K + AV+ + M + P+ + Y+ ++DG
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDG 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 9/177 (5%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D AV F +M + P +++L + + + LI ++G
Sbjct: 247 MINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATG 306
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ ++ T + ++N LC + + + G P T N +V+GLC + A
Sbjct: 307 RSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQ 366
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY+ + + +ING C+ + A C PNAV Y I+
Sbjct: 367 EIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAVTYEIII 414
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 73/150 (48%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
++ +N + +++ K A+ L K + PD T + +I+ L L R ++ ++
Sbjct: 241 LRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLID 300
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ TG T ++++N LC + +A+ +++ G++PN T+ +++G CK G
Sbjct: 301 EMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNG 360
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ A +++ + + +Y +++G
Sbjct: 361 RLKDAQEIFHDLLIKGYRLDVRLYTVMING 390
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 35/204 (17%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAIS------------------- 86
L+ A+ F++M N P V FN L + + S
Sbjct: 152 LEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSS 211
Query: 87 ------LIKRAHSS----------GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTG 130
L+K+A+ + GV D+ + NI+IN L + + + +
Sbjct: 212 LIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKS 271
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
+ P T T +T+++GL ++ M G N T+ +++N CK G ++A+
Sbjct: 272 MTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAI 331
Query: 191 LCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ EPN V YN ++DG
Sbjct: 332 RIFTKIKDKGFEPNMVTYNILVDG 355
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 79.7 bits (195), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
+++ +D A+ F + + P V FN L + + + A L G++P +
Sbjct: 567 NIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVV 626
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T N+ I+C C ++ L + K P+ T T+V+G C E A+ + M
Sbjct: 627 TYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEM 686
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
E G PN TF A+I G CK A+ +R M ++ +P++ +Y A++
Sbjct: 687 EKNGCPPNQITFMALIYGLCKCCRPTEALCYLREMQQKEMKPDSFIYVALL 737
Score = 71.6 bits (174), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F M P + +++ + + A+ + K S G PD+ N++I
Sbjct: 539 ACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIR 598
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC + R + + K GL P+ T N ++ C NV A+ M P
Sbjct: 599 GLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVP 658
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ +++GFCK + A+L + M + C PN + + A++ G
Sbjct: 659 SVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYG 704
Score = 62.4 bits (150), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A++ F+ M P + +N+L + ++ + L++ G+ P +T N
Sbjct: 431 LDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNS 490
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+ CLC + + +L + G P +V LC V A F +M G
Sbjct: 491 IYGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQG 550
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER-HCEPNAVVYNAIMDG 214
+ P+ ++ A I G I + + A+ +++ HC P+ V +N ++ G
Sbjct: 551 FLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHC-PDVVCFNVLIRG 599
Score = 58.5 bits (140), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 75/179 (41%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L++S+ L+ + +M P +NS++ + + K +AA ++K S
Sbjct: 455 NLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLKEMGSC 514
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G P I +++ LC R L + + G P + + + GL V A
Sbjct: 515 GHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHA 574
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ + + + G+ P+ F +I G CK+ A +V+R P+ V YN +D
Sbjct: 575 MKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFID 633
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 66/171 (38%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K + AA +M + P +K L + A + G PDI +
Sbjct: 499 KDVSAACVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSY 558
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+ I L +++ + + ++ G P N ++ GLC N A +
Sbjct: 559 SAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVK 618
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G P+ T+ I+ +CK G+ + A+ + M + P+ V Y ++DG
Sbjct: 619 RGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDG 669
Score = 51.6 bits (122), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 63/153 (41%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
FP + F+ + + A+SL P I N +I+ LC R
Sbjct: 412 FPNITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYE 471
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+L + + G+ PT T N+I LC +V++A + M + G+ P ++ C
Sbjct: 472 LLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTLLVKELC 531
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A + NM ++ P+ V Y+A + G
Sbjct: 532 DHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGG 564
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + +K +D A+ F +M P +NSL + ++ + A L+ + H G
Sbjct: 122 IINGLCKIKMVDEALNLFTEMHCK---PNTVTYNSLIDGLCKSGRISHAWELLDQMHDRG 178
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ T N ++ LC + ++++ + G++P T + +++GLC E + +A
Sbjct: 179 QPADVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQ 238
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY+ +T+ +ING C G + A+ + M + C PNAV Y I+
Sbjct: 239 VIFQDLLIKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATII 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NS + + AI+L+K+ G+ P+I T +I+I+ LC R + +
Sbjct: 186 YNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLL 245
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G + T T ++NGLCLE A+T ME+ G PN+ T+ II+ K + +
Sbjct: 246 IKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATIIHALFKNDEND 305
Query: 188 SAVLCMRNMVER 199
A +R M+ R
Sbjct: 306 KAEKLLREMIAR 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + + + + K A++L H P+ T N +I+ LC R + +
Sbjct: 114 PYVFSYIIIINGLCKIKMVDEALNLFTEMHCK---PNTVTYNSLIDGLCKSGRISHAWEL 170
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + G T N+ ++ LC + V A+ + +++ G QPN T+ +I+G CK
Sbjct: 171 LDQMHDRGQPADVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCK 230
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G E+A + ++++ + + Y +++G
Sbjct: 231 EGRLENAQVIFQDLLIKGYKVTLWTYTIMING 262
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C L + + LG+V T NT+++G CL N V A + P
Sbjct: 63 CFASLVSSGWCFLYLGMV--------XVTYNTLMDGYCLANEVNKAKNVFNVIGKRRMTP 114
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ IING CKI + A + E HC+PN V YN+++DG
Sbjct: 115 YVFSYIIIINGLCKIKMVDEA---LNLFTEMHCKPNTVTYNSLIDG 157
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 78.6 bits (192), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN++ + + A + K +SG+ PD+Y+ +I+I+ C R V +
Sbjct: 254 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 313
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+G+ P + + +++G C E V A+ M+N+G P+ Y++ +I+GFC+ GD +
Sbjct: 314 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 373
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
SA+ M + P+A Y +++ G
Sbjct: 374 SAIKFWEEMTSNNFSPSAFNYCSLIKG 400
Score = 68.6 bits (166), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 79/167 (47%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F +M + P V ++ L R A + K +SG+ P+IY+ +I
Sbjct: 267 LDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSI 326
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C R L V + +G+ P + + +++G C + ++ SA+ F M +
Sbjct: 327 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 386
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ P+++ + ++I G+ K +A+ R M + P+ + N I+
Sbjct: 387 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 433
Score = 58.2 bits (139), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 4/183 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVAR----TKHYAAAISLIKRA 91
LL + +D F ++ P P + + + F R + A ++ +
Sbjct: 148 LLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKI 207
Query: 92 HSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
+ SG P++ T I LC + ++ + + N ++ GLC +
Sbjct: 208 YMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGIL 267
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
A + M+N+G P+ Y++ +I+GFC+ G + A + M PN Y+ +
Sbjct: 268 DEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSIL 327
Query: 212 MDG 214
+DG
Sbjct: 328 IDG 330
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 72/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ F +M + P V ++ L R +AI + S+ +P +
Sbjct: 337 VDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCS 396
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I ++ A L ++ K G+ P T N I++ C + + A+ + + G
Sbjct: 397 LIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENG 456
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N Y++ I+ C+ E A+ + M++R+ P+ V Y+ ++
Sbjct: 457 VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLI 503
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 8/153 (5%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+ L A A + RA G+ +I + N ++ CL R + ++
Sbjct: 110 FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLI 169
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME------NAGYQPNSYTFGAIINGFC 181
K G RP T ++N C V +V R E +G PN T+G I G C
Sbjct: 170 KFGPRPNIHTYTIMMNFFC--RGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 227
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
K+G A ++N+ ++ N +NA++ G
Sbjct: 228 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYG 260
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 66/166 (39%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A+ ML N P V ++++L + A+ + A+ L + G+ ++ T I+
Sbjct: 478 EKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTIL 537
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
IN + + + ++ + P ++V G C + A M G
Sbjct: 538 INLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGC 597
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
PN T+ IN + K+ A M ER P+ ++Y ++
Sbjct: 598 SPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 643
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +FN+ + K++ + ++ + + + P+ +T+NI++NC ++ S+
Sbjct: 53 PRIIEFNNRLHSLVMQKNFDSVVTHYRSMELNNMKPNFHTINILLNCFAQAKKANLAFSM 112
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K G P T N+++ +C V A+ ++ AG ++G +I+G CK
Sbjct: 113 FAKLLKLGYEPNIITFNSLLKAMCFNGEVQMALDLHDKLKKAGVPLTIVSYGTLISGLCK 172
Query: 183 IGDTESAVLCMRNMVERHC-EPNAVVYNAIMD 213
I ++A+L ++ M + C P+A++Y I+D
Sbjct: 173 INRHDAAMLVLKKM--KVCVPPDAIIYKTIID 202
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + + + AA+ ++K+ V PD +I+CLC + L + +
Sbjct: 163 YGTLISGLCKINRHDAAMLVLKKMKVC-VPPDAIIYKTIIDCLCKDSKVETALELYTEMI 221
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
++G+ P T T+++GLC+ +N +A F + M + P YT+ A++ CK
Sbjct: 222 ESGIFPDVFTYTTLIHGLCISDNFKAAFEFFKEMVSNEINPTVYTYSALMAYLCKRKRVR 281
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + M++ EP+ ++N +M+G
Sbjct: 282 ESKALLNTMIKDGLEPDLAIFNTLMEG 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVART--KHYAAAISLIKRAHSSGVAPD 99
SL + A F+ + P + +N LF + + L + S V+PD
Sbjct: 311 SLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLLSQGLNIPEETLPLFEDMKSKKVSPD 370
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+ T N +I+ +C+ R +G + G++P AT N ++ LC E + A+ T
Sbjct: 371 LITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQPDAATYNPLLKALCREKKIDEAIALTN 430
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ G Q ++YTF +I+ F K G E+A + ++ + V++ ++ G
Sbjct: 431 RISGQGIQLDAYTFTILIDAFWKSGRFEAAQATFWDAFKKGYDLTLAVFHVMLKG 485
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ + +M+ + FP V + +L + + ++ AA K S+ + P +YT +
Sbjct: 210 VETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEFFKEMVSNEINPTVYTYSA 269
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ LC +R ++L + K GL P A NT++ G C + + A + G
Sbjct: 270 LMAYLCKRKRVRESKALLNTMIKDGLEPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRG 329
Query: 166 YQPNSYTFGAIINGFCKIG--DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ Y++ + G G E + +M + P+ + YN I+ G
Sbjct: 330 ITPDIYSYNILFKGLLSQGLNIPEETLPLFEDMKSKKVSPDLITYNTIIHG 380
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 1/178 (0%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
L+S+ K D+ V + M N P N L A+ K A S+ + G
Sbjct: 62 LHSLVMQKNFDSVVTHYRSMELNNMKPNFHTINILLNCFAQAKKANLAFSMFAKLLKLGY 121
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
P+I T N ++ +C L + + K G+ T + T+++GLC N +A+
Sbjct: 122 EPNIITFNSLLKAMCFNGEVQMALDLHDKLKKAGVPLTIVSYGTLISGLCKINRHDAAML 181
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+ P++ + II+ CK E+A+ M+E P+ Y ++ G
Sbjct: 182 VLKKMK-VCVPPDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHG 238
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 58/151 (38%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A F +M+ P +N L + R K AI+L R G+ D YT I
Sbjct: 387 MDCAWDFIGEMVDKGIQPDAATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTI 446
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ R + FK G T A + ++ GLC + A+ M+ G
Sbjct: 447 LIDAFWKSGRFEAAQATFWDAFKKGYDLTLAVFHVMLKGLCENHMFDEAIKILSKMKKKG 506
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
PN + I+ + + E A + M
Sbjct: 507 CTPNKAIYEVIVYALFENDEIEKATKLVYEM 537
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F +M P + +NSL + + + A ++K H SG+ PDI T I+++
Sbjct: 349 AVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLD 408
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC +R + + + ++GL P + +++G C + A+ R M P
Sbjct: 409 GLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVP 468
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ T+ +I+G C+ G +A + M + P+ + Y+ ++D
Sbjct: 469 HIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLD 513
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ + K LD A+ F+Q++ + P V + L ++ A++L++ H
Sbjct: 406 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 465
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P I T + +I+ LC R + +L + G P T T + +++ L + ++ AV
Sbjct: 466 LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAV 525
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G +P+ + +I+G+CK + A+ R M ++ P+ V Y + +
Sbjct: 526 FLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFN 583
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%)
Query: 71 LFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTG 130
L + ++K AI L + SG+ PD+++ I+I+ C RR +++L +
Sbjct: 406 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 465
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
L P T + +++GLC +++A M G P++ T+ +++ K + AV
Sbjct: 466 LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAV 525
Query: 191 LCMRNMVERHCEPNAVVYNAIMDG 214
M++R EP+ + Y ++DG
Sbjct: 526 FLFNQMIKRGLEPDVMCYTIMIDG 549
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D F+++M+ P + SL + + L+ G+ +Y +
Sbjct: 206 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 265
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC + + G P T ++ G CL+ NV A + G
Sbjct: 266 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 325
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
++ + +T+ I+G+CK+G AV M PN V YN+++D
Sbjct: 326 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLID 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLI-KRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLV 126
FN T + +T ++ AI+L + +++ + P I TL I+I C HL +F S+ G +
Sbjct: 44 FNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLGHVSFSFSIFGKI 103
Query: 127 FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
K G T LNT++ GLC+ V A+ F + N G+ N ++G +ING C+ G
Sbjct: 104 LKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRV 163
Query: 187 ESAVLCMR 194
AV +R
Sbjct: 164 NEAVNLLR 171
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ + GV P+I T N +I+CLC + ++ + ++GL P T +++
Sbjct: 349 AVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLD 408
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
GLC + A+ + +G P+ +++ +I+G C A+ +R+M ++ P
Sbjct: 409 GLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVP 468
Query: 204 NAVVYNAIMDG 214
+ V Y+ ++DG
Sbjct: 469 HIVTYSCLIDG 479
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G D++T N+ I+ C + R + V + + G+ P T N++++ LC V+ A
Sbjct: 325 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 384
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M +G P+ T +++G CK + A+L +VE P+ Y ++ G
Sbjct: 385 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 444
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 47/119 (39%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V ++ +IVI+CLC G + G+ P T +++ GLC
Sbjct: 186 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGF 245
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G + Y F +I+G CK G A MV R EPN V A+M G
Sbjct: 246 GLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGG 304
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 55/141 (39%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ + A+ M N P + ++ L + R+ + A L+ H G PD T
Sbjct: 449 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITY 508
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+++ L + + + + K GL P +++G C + A+ R M
Sbjct: 509 SILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHM 568
Query: 164 AGYQPNSYTFGAIINGFCKIG 184
P+ T+ + N K G
Sbjct: 569 KNLVPDIVTYTILFNAVFKSG 589
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + + L+AA F M FP + +N L + A+ L +G
Sbjct: 234 LVDVLCKVGDLEAARNCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNG 293
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V D++T +I++ LC R +++ + K G+ T N +++G C ++ A+
Sbjct: 294 VFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAI 353
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +PN TF +I+GFCK G+ ++A+ MV + P+ V Y A++DG
Sbjct: 354 EVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDG 412
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 54 HQMLAANP--FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
H ++ P P +++ N+L + ++K + + S+ S G+ P + T I++NC C
Sbjct: 75 HLHISNKPTTLPSLRECNALLHSLVKSKKFDSVWSVYNNLLSRGLLPTLITYGILLNCCC 134
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+ + V + + G+ P T++ C E ++ A F + M +G +PN Y
Sbjct: 135 NQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLY 194
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
T+ +I+G+CK G+ + +M+ P+ V + ++D
Sbjct: 195 TYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVD 236
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+S+ K D+ + ++ +L+ P + + L ++ A + G
Sbjct: 94 LLHSLVKSKKFDSVWSVYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKVFDEMIQRG 153
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P++ +I C+ L L+ ++G+ P T T+++G C NV
Sbjct: 154 IVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVF 213
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P+ TF +++ CK+GD E+A C M + PN VYN ++DG
Sbjct: 214 EIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLYVYNCLIDG 272
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%)
Query: 80 HYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLN 139
+ A +L++ +GV + T N VI+ C + + V + + + P T +
Sbjct: 313 RFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFS 372
Query: 140 TIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
T+++G C + N+ +A+ M G P+ T+ A+I+G CK+ +++ A + M+E
Sbjct: 373 TLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFELHKEMMEA 432
Query: 200 HCEPNAVVYNAIMDG 214
PN V +++DG
Sbjct: 433 GLTPNVVTVTSLIDG 447
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + A F +M+ P V + +L A +K SG
Sbjct: 129 LLNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESG 188
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++YT +I+ C + + + GL P T +V+ LC ++ +A
Sbjct: 189 VEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAAR 248
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH 200
+M+ G PN Y + +I+G+CK GD A+ +R+ +ER+
Sbjct: 249 NCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMR-LRDEMERN 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 15/182 (8%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A +M A F +N++ + AI + + + P++ T +
Sbjct: 314 FEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFST 373
Query: 106 VINCLCHL--RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+ C + A GL + +V K GL P T +++G C N A + M
Sbjct: 374 LIDGFCKKGNMKAAMGLYI-EMVIK-GLVPDVVTYTALIDGHCKVENSKVAFELHKEMME 431
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE--------RH---CEPNAVVYNAIM 212
AG PN T ++I+G K G T A+ E H C PN V+Y A++
Sbjct: 432 AGLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVGSPGGKTDHSGVCSPNEVMYAALI 491
Query: 213 DG 214
G
Sbjct: 492 QG 493
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 11/179 (6%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ QM P V F++L + + AA+ L G+ PD+ T
Sbjct: 349 MEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTA 408
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C + + + + + GL P T+ ++++GL E A+ G
Sbjct: 409 LIDGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVG 468
Query: 166 Y-----------QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN + A+I G CK G A ++M +P+ V+Y +++
Sbjct: 469 SPGGKTDHSGVCSPNEVMYAALIQGLCKDGRIFKATKFFKDMRCSGFKPDMVLYVIMLE 527
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 78 TKHYAAAISLIKRAH-----SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLR 132
TK+ + +K+ H P + N +++ L ++ SV + GL
Sbjct: 61 TKNNITKTTSLKKQHLHISNKPTTLPSLRECNALLHSLVKSKKFDSVWSVYNNLLSRGLL 120
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
PT T ++N C + + ++A M G PN + +I FC GD + A
Sbjct: 121 PTLITYGILLNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERF 180
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
++ M E EPN Y ++DG
Sbjct: 181 LKLMRESGVEPNLYTYVTLIDG 202
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V F+ L R A A+ R G PD + +IVI+ LC RR A +
Sbjct: 178 VSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRR-ASEAELFF 236
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
K P ++V+G C ++A A M+ AG +PN YT+ +I+ C+ G
Sbjct: 237 DSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCG 296
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIM 212
A M++ C+PNAV +N++M
Sbjct: 297 QITRAHDVFSEMIDAGCDPNAVTFNSLM 324
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 49 AVAFFHQMLAANPFPCVKD-FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
++AFF+ FP + +N + + +H+ A LI S GV + T ++++
Sbjct: 126 SLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLV 185
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
A + + G +P + + +++ LC + + A F +++ ++
Sbjct: 186 RRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FE 244
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ + ++++G+C+ GD A +M E +PN Y+ ++D
Sbjct: 245 PDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDS 291
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + SL R A A + +GV P++YT +IVI+ LC + V
Sbjct: 245 PDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDV 304
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G P T N+++ + M+ G ++ ++ +I CK
Sbjct: 305 FSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCK 364
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ + AV + MV++ PNA +N+I
Sbjct: 365 DENLDEAVKVLDTMVKKGVAPNASTFNSI 393
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F +M+ A P FNSL + + + + G A D + N +I C
Sbjct: 305 FSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCK 364
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTI---------VNGL-----------CLEN--- 149
+ VL + K G+ P +T N+I VNG C+ N
Sbjct: 365 DENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLT 424
Query: 150 ------------NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMV 197
++ + + M+ + +PN T+ +I FC+ G +A M+ MV
Sbjct: 425 YNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMV 484
Query: 198 ERHC-EPNAVVYNAIMD 213
E C +PN +Y +++
Sbjct: 485 EEKCLKPNLSIYETVLE 501
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++S+ K + A + +M+ P V F++L A L
Sbjct: 96 IIDSLCKDKLVTEAYVLYSEMITKRISPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKN 155
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+YT NI+++ C T +V+ ++ K G+ P T ++++G CL N V A
Sbjct: 156 INPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYCLVNKVNKAK 215
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV-----LCMR-----NMVERHCEPNA 205
+ G PN+ ++ IINGFCKI + A+ +C R M +R N
Sbjct: 216 HVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANV 275
Query: 206 VVYNAIM 212
+ YN+ +
Sbjct: 276 ITYNSFL 282
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%)
Query: 118 FGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAII 177
F S+ G + K G +P T NT++ GLC+ V A+ F H+ + G+ + ++G +I
Sbjct: 3 FAFSLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLI 62
Query: 178 NGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
NG CK+G T A+ +R + + + V+Y+ I+D
Sbjct: 63 NGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIID 98
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPC----------VKDFNSLFTFVARTKHYAAAI 85
++N +K +D A+ F++M P V +NS + + AI
Sbjct: 236 IINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANVITYNSFLHALCKNHQVDKAI 295
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL 145
+ +K+ G+ P I T NI+I+ LC R + + G + T T N ++NGL
Sbjct: 296 AFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQDLLIKGYKVTVWTYNIMINGL 355
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
CLE A+ ME G P+ T+ II K + + A +R M+ R
Sbjct: 356 CLEGLFDQAMILLEKMEENGCIPDVVTYETIIRALFKNDENDRAEKLLREMIAR 409
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD----------IYTLNIVINCLCH 112
P +N + + K A++L G+APD + T N ++ LC
Sbjct: 228 PNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANVITYNSFLHALCK 287
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ ++ + + G++P T N +++GLC E + +A + + GY+ +T
Sbjct: 288 NHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQDLLIKGYKVTVWT 347
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ +ING C G + A++ + M E C P+ V Y I+
Sbjct: 348 YNIMINGLCLEGLFDQAMILLEKMEENGCIPDVVTYETII 387
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 45/214 (21%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A FH+M+ N P V FN L + + A ++I GV PD+ T
Sbjct: 141 LKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGS 200
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNG--------------------- 144
+++ C + + VL L+ + GL P + N I+NG
Sbjct: 201 LMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRG 260
Query: 145 ------------------------LCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
LC + V A+ F + +++ G QP T+ +I+G
Sbjct: 261 IAPDKMHDRGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGL 320
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
CK E+A + ++++ + + YN +++G
Sbjct: 321 CKEVRLENAQVIFQDLLIKGYKVTVWTYNIMING 354
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A + F ++L P + FN+L + A+ S G D +
Sbjct: 1 MDFAFSLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGT 60
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN LC + +T L VL + + +TI++ LC + V A M
Sbjct: 61 LINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKR 120
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ TF A+I GFC +G + A MV ++ P+ +N ++D
Sbjct: 121 ISPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVD 168
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 64/147 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + A+ ++++ V D+ + +I+ LC + + +
Sbjct: 58 YGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMI 117
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T + ++ G C+ + A M P+ YTF +++ FCK G+T+
Sbjct: 118 TKRISPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTK 177
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M++ P+ V Y ++MDG
Sbjct: 178 EAKNVIAMMMKEGVIPDVVTYGSLMDG 204
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN--CLCHLRRTAFGLSVLGL 125
++++ + + K A L + ++PD+ T + +I C+ + AFGL +
Sbjct: 93 YSTIIDSLCKDKLVTEAYVLYSEMITKRISPDVVTFSALIYGFCIVGQLKEAFGL-FHEM 151
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
V K + P T N +V+ C E N A M G P+ T+G++++G+C +
Sbjct: 152 VLKN-INPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYCLVNK 210
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + + PNA YN I++G
Sbjct: 211 VNKAKHVLSLISRMGLTPNANSYNIIING 239
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A SL + G PDI T N +I LC + L V G + T++N
Sbjct: 4 AFSLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLIN 63
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
GLC A+ R ++ + + II+ CK A + M+ + P
Sbjct: 64 GLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISP 123
Query: 204 NAVVYNAIMDG 214
+ V ++A++ G
Sbjct: 124 DVVTFSALIYG 134
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + + K ++ +GV PDI T N +++ L A V+ +
Sbjct: 458 YNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMI 517
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVT-FTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
K GL+P+ T +++ CL+ N+ A+ F + PN+ + +I+ CK D
Sbjct: 518 KEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDV 577
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E AV M +M + +PN YNAI G
Sbjct: 578 ERAVSLMDDMKVKGVQPNTTTYNAIFKG 605
Score = 75.5 bits (184), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 62/117 (52%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
P+ T N +I+ C + GL+ + ++P TLNT+V+G+C V SAV F
Sbjct: 313 PNTITYNCLIDGFCKAGNIDKARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEF 372
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ G + N+ T+ A+I+ FC + + + A+ M+ C P+A+VY ++ G
Sbjct: 373 FNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLISG 429
Score = 74.3 bits (181), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K L+ ++M P + +N+L +++ + +A A ++K+ G+ P + T
Sbjct: 469 KKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTY 528
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGL-RPTTATLNTIVNGLCLENNVASAVTFTRHME 162
VI+ C + + + G + T + P T N +++ LC N+V AV+ M+
Sbjct: 529 GAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMK 588
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
G QPN+ T+ AI G A M MVE C P+ V
Sbjct: 589 VKGVQPNTTTYNAIFKGVQDKRMLHKAFELMDRMVEDACNPDYV 632
Score = 71.2 bits (173), Expect = 7e-13, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
L+++ + +D A+ +F +ML++ P + L T R + +S +KRA
Sbjct: 391 LISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRA- 449
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
G D + N++I+ C ++ +L + + G++P T NT+V+ L + A
Sbjct: 450 --GFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFA 507
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV-----LCMRNMVERHCEPNAVV 207
+A + M G +P+ T+GA+I+ +C + + A+ +C +MV PN V+
Sbjct: 508 TATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMV----PPNTVI 563
Query: 208 YNAIMDG 214
YN ++D
Sbjct: 564 YNILIDA 570
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 8/154 (5%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
N+L T + R + L+ + P + T I+IN C RR L V +
Sbjct: 206 NALLTGLGRERDIHKMNELLAEMEEMKIHPSVITFGILINQFCKSRRIDEALGVFDKLRG 265
Query: 129 T-------GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY-QPNSYTFGAIINGF 180
G+ P NT++NGLC + M+ +PN+ T+ +I+GF
Sbjct: 266 KGREKKWIGVEPDVVLYNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDGF 325
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
CK G+ + A M E +PN V N ++DG
Sbjct: 326 CKAGNIDKARELFGLMNEEQIQPNVVTLNTLVDG 359
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 17/196 (8%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANP-FPCVKDFNSLFTF---VART---KHYA--AAI 85
HLL + +D A Q+L + FP DF F V R K +A +
Sbjct: 94 HLLVGLLKSGRIDDARQVLDQLLQPDTGFP-PDDFTGQIVFGELVKRDRPGKGFADEEIV 152
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL 145
L+ + GV PD + L +I+ LC R+ +L V K G A+ N ++ GL
Sbjct: 153 GLVTKLCEYGVFPDTFKLTQLISKLCGNRKNGVAWELLHAVIKLGGTVEAASCNALLTGL 212
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER------ 199
E ++ ME P+ TFG +IN FCK + A+ + +
Sbjct: 213 GRERDIHKMNELLAEMEEMKIHPSVITFGILINQFCKSRRIDEALGVFDKLRGKGREKKW 272
Query: 200 -HCEPNAVVYNAIMDG 214
EP+ V+YN +++G
Sbjct: 273 IGVEPDVVLYNTLING 288
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 64/167 (38%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A F M P V N+L + + +A+ G+ + T
Sbjct: 331 IDKARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTA 390
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C + + + +G P +++GL + + A ++ AG
Sbjct: 391 LISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAG 450
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + + + +I+GFCK E + M E +P+ V YN ++
Sbjct: 451 FGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLV 497
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P +N L + + A L + + P++ TLN +++ +C + R +
Sbjct: 313 PNTITYNCLIDGFCKAGNIDKARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEF 372
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC- 181
+ GL+ T +++ C NN+ A+ + M ++G P++ + +I+G
Sbjct: 373 FNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLISGLTI 432
Query: 182 --KIGDTESAVLCMRNM---VERHCEPNAVVYNAIMDG 214
++GD V ++ ++RHC YN ++ G
Sbjct: 433 AGRMGDASVVVSQLKRAGFGLDRHC------YNVLISG 464
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
+ M + P V ++S+ A ++ +A I T N++IN LC
Sbjct: 256 MYESMKLSGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLC 315
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+++ + + V + GLRP T NT++ G C + +AV +++ G P
Sbjct: 316 RMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVV 375
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +I G+ K+G+ A+ ++ M ER+ P V Y +++G
Sbjct: 376 TYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNG 418
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + +K L AV F+++ P + +N+L + A+ L S+G
Sbjct: 310 LINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNG 369
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++P + T N +I + A L+++ + + + PT T ++NG N + A
Sbjct: 370 LSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAF 429
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME +G + YT+G +I+G C G + A +++ E + EPN+V+Y+ ++ G
Sbjct: 430 EIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLDELNMEPNSVIYDTLIHG 488
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 78/161 (48%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ +D AV ++++ + P V +N+L ++ + A A++L+K +AP T
Sbjct: 353 EKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTY 412
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
I++N + + L+ K+GL T +++GLC+ ++ A + ++
Sbjct: 413 TILLNGFVRINYMEKAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLDE 472
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
+PNS + +I+G+CK G+ A+ + M+ + PN
Sbjct: 473 LNMEPNSVIYDTLIHGYCKEGNCYRALRLLNEMIGKGMVPN 513
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ F H+M+ P FN+L + R+ + A L+ + V D+Y+ I+
Sbjct: 112 DEALYFLHEMIHKGHAPISNTFNNLLNLLIRSNSFCRAW-LVFDELKNKVVLDVYSFGIM 170
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I C +LG++ KTGL P T+++G C +V A M+
Sbjct: 171 IKGCCEAGDLMKSFQLLGMMEKTGLSPNVVIYTTLIDGCCKNGDVHLAKKLFCKMKGLDL 230
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N +T+ +INGF K G + +M PN Y++++
Sbjct: 231 VANQHTYSVLINGFFKQGLQKEGFQMYESMKLSGIVPNVYTYSSVI 276
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 4/179 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL + RS + A+ F +ML P +N L ++ A L K+ G
Sbjct: 911 LLKAGRS----EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG 966
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ + I++ CLC R + + TGL P T + N I+NGL + A+
Sbjct: 967 IRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEAL 1026
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+N G P+ YT+ A+I G + AV + EP+ YNA++ G
Sbjct: 1027 SLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRG 1085
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K LDA F P ++ +N L + + A+ L + S+G P+ +T
Sbjct: 775 KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N++++ +R + + G P T N I++ L NN+ A+ + +
Sbjct: 835 NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P T+G +I+G K G +E A+ M++ C PN+V+YN +++G
Sbjct: 895 GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N +D A F +M+ P +K + L + T A+ + +G
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG 1001
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD + N +IN L RR LS+ + G+ P T N ++ L + V AV
Sbjct: 1002 LDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAV 1061
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
++ G +P+ +T+ A+I G G+ + A + M+ C PN +
Sbjct: 1062 KMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 4/169 (2%)
Query: 46 LDAAVAFFHQMLAAN--PFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
L+ A+ ++++++ + P PC + L + + A+ + + G P+
Sbjct: 882 LNKALDLYYELMSGDFSPTPCT--YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIY 939
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+IN F + + K G+RP + +V LC+ + AV + ++
Sbjct: 940 NILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKL 999
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G P++ ++ IING K + A+ M R P+ YNA++
Sbjct: 1000 TGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 72/167 (43%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A+ + +M++ P +K +++L + R ++L++ S G+ P+IYT I
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I L RR + + G P T +++ LC + A M + +
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ T+ +++ F K+GD E+ M P+ V Y +++
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIE 383
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L ++ A L+ S G PD+ +N +IN L R + G +
Sbjct: 518 YNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK 577
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
L PT T N ++ GL E + A+ M +G PN+ TF ++++ K +
Sbjct: 578 NLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVD 637
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ M +C P+ + YN I+ G
Sbjct: 638 LALKMFCRMTMMNCNPDVLTYNTIIYG 664
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++++ + LD A + +M A++ P + +L + G
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
APD+ T I+I LC +L ++ G+ P T NT++ GL + A+
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
+ME+ G +P ++++ I+ + K GD A+ M +R P+ NA
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNA 485
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV +F ++ P +N + + +++ A+SL + G++PD+YT N
Sbjct: 987 IDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNA 1046
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I L + + + + GL P+ T N ++ G L N A + + M G
Sbjct: 1047 LILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG 1106
Query: 166 YQPNSYTFGAIINGFCKIG 184
PN+ TF + N + + G
Sbjct: 1107 CSPNTETFAQLPNKYPRAG 1125
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 66/167 (39%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A+ F M +A P +N L ++K L S G P+ T NI+
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ L L + + PT T +++GL A+ M + G
Sbjct: 873 ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PNS + +INGF K G+ + A + MV+ P+ Y +++
Sbjct: 933 GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVE 979
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N++ +DAA F ++ P V +N L T + + A+ L SG
Sbjct: 556 LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+ T N +++CL L + + P T NTI+ GL E + A
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAF 675
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC-EPNAVVYNAIMD 213
F M+ P+ T +I G + G E A+ + V + C + N+ + +M+
Sbjct: 676 WFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELME 733
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A +M++ P V NSL + + AA + R + +AP + T NI
Sbjct: 531 IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNI 590
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ L + L + G + ++G P T T N++++ L + V A+ M
Sbjct: 591 LLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ II G + G + A M ++ P+ V ++ G
Sbjct: 651 CNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPG 698
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 61/171 (35%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ LD A+ M + P + + ++ A AI + G+ P I
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAAC 483
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N + L R + + + K GL P + T N ++ + A M +
Sbjct: 484 NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +P+ ++IN K G ++A + P V YN ++ G
Sbjct: 544 KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTG 594
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
++L + +++ + A+ L+ H G PDI T N +++ LC +++L +
Sbjct: 111 STLIDVLCKSRRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKD 170
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
G+RP T +V GLC + A + E+ GY + Y + +I GFC G +
Sbjct: 171 QGIRPNMNTYTILVKGLCRSGKLEDA---RKVFEDLGYNLDVYAYTVMIQGFCDKGLFDE 227
Query: 189 AVLCMRNMVERHCEPNAVVYNAIM 212
+ + M E C P+A Y I+
Sbjct: 228 VLALLSKMEENGCIPDAKTYEIII 251
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P T + +++G C+ + A+ F M PN YTF +++GFCK G + A
Sbjct: 8 PNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGRVKEAKNV 67
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+ M+++ +P+ V YN++MDG
Sbjct: 68 LAMMMKQGIKPDVVTYNSLMDG 89
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 27/186 (14%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M++ P V +++L + AI + + P++YT I+++ C R
Sbjct: 1 MVSRRTSPNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGR 60
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNG---------------------------LCLE 148
+VL ++ K G++P T N++++G LC
Sbjct: 61 VKEAKNVLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAKKKCIANKFFRSTLIDVLCKS 120
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
V+ A+ M + G QP+ T+ +I++ CK A+ + + ++ PN Y
Sbjct: 121 RRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTY 180
Query: 209 NAIMDG 214
++ G
Sbjct: 181 TILVKG 186
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 75.9 bits (185), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 65/146 (44%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
N L + +H+ AI+L SGV PD + + L+ ++ L+ K
Sbjct: 123 NRLLQSLVDLRHFQKAITLFNDVAESGVRPDSFAYGKAVLSAAMLKDLNKCFELINLMEK 182
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
G+RPTT N ++ GLC + A M PN+ TF +I+G+CK+G +
Sbjct: 183 DGIRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDE 242
Query: 189 AVLCMRNMVERHCEPNAVVYNAIMDG 214
A M + + N V YN ++ G
Sbjct: 243 AFRLRARMNGPYSKANVVTYNCLLSG 268
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 62/123 (50%)
Query: 92 HSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
+ +G D +T N ++N LC + + +L + G+ P+ + N +VN C + ++
Sbjct: 314 NGNGTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDL 373
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ ME G +P+ TF +IN FC+ GD A ++ M+E+ P YN++
Sbjct: 374 NKGILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSL 433
Query: 212 MDG 214
++G
Sbjct: 434 ING 436
Score = 70.1 bits (170), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 76/179 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + + ++ A ++ + P +N L + I + G
Sbjct: 328 LLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKRG 387
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P T N +IN C + + + G+ PT T N+++NG + +
Sbjct: 388 LKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRCF 447
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+EN G +PN ++G++IN CK G A + + +MV R PNA +YN +++
Sbjct: 448 EIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEA 506
Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P VK + SL + + A ++ + GV+P+ N++I C L +
Sbjct: 460 PNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRF 519
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + G+ T T NT++NG+ V A HM GY+P+ T+ ++++ +
Sbjct: 520 LNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTRKGYKPDVITYNSLMSVYAM 579
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ E + NM +R +P+ ++ +++
Sbjct: 580 SGNPEKCLELYDNMKKRGIKPSIGTFHPLIN 610
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 60/154 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL S+ L+ A+ F+ + + P + A K LI G
Sbjct: 125 LLQSLVDLRHFQKAITLFNDVAESGVRPDSFAYGKAVLSAAMLKDLNKCFELINLMEKDG 184
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P Y N+V+ LC ++ V + + + P T T NT+++G C + A
Sbjct: 185 IRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAF 244
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
M + N T+ +++G C +G E A
Sbjct: 245 RLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDA 278
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 28/206 (13%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L + K + A F +M+ N P FN+L + A L R +
Sbjct: 195 VLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAFRLRARMNGPY 254
Query: 96 VAPDIYTLNIVINCLC-------------HLRRTAF---GLSVL------------GLVF 127
++ T N +++ LC + R F G S L GL+
Sbjct: 255 SKANVVTYNCLLSGLCGLGRLEDAKRVLLEMERKGFLPRGFSSLVFDDQLMSGNENGLLN 314
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G + T N ++NGLC V A +E+ G P+ ++ ++N +C+ GD
Sbjct: 315 GNGTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLN 374
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
+L M +R +P+ V +N +++
Sbjct: 375 KGILTAEEMEKRGLKPSYVTFNTLIN 400
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 7/162 (4%)
Query: 54 HQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG-VAPDIYTLNIVINCLCH 112
H +L+ F +LF F + I L + G + P+ + +N ++ L
Sbjct: 78 HSLLSKPIF-----LETLFPFCSNPNAIHRVIELFYSMKNDGFILPNCF-INRLLQSLVD 131
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
LR +++ V ++G+RP + V + ++ ME G +P +Y
Sbjct: 132 LRHFQKAITLFNDVAESGVRPDSFAYGKAVLSAAMLKDLNKCFELINLMEKDGIRPTTYV 191
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ G CK + A M++R+ PN V +N ++DG
Sbjct: 192 YNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDG 233
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 75 VARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPT 134
+ + + A+ +++ A G D + + +IN LC R VL L+ K G +
Sbjct: 407 LCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLN 466
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
N +++G N V SAV R M G PN T+ +INGFC+ A C+
Sbjct: 467 AHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVE 526
Query: 195 NMVERHCEPNAVVYNAIMDG 214
M+E+ +P+ + Y+ ++DG
Sbjct: 527 EMLEKGWKPDLITYSTLIDG 546
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 36/215 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN+ D A FF A P V+ +N L + + + A L+ S G
Sbjct: 123 LLNAFAESHQWDRAEKFFAYFETAGVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVG 182
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN------------ 143
+ PD +T +IN +R L V + + G+ P A N I++
Sbjct: 183 MKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGK 242
Query: 144 ------------------------GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
GLC ++ M+ ++ +++T+ A+I+G
Sbjct: 243 MMWERLLRVETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHG 302
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ GD + A MV R + + V NA+++G
Sbjct: 303 LCEGGDLDGARKVYEEMVLRGVKADVVTCNAMLNG 337
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAA-NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
LL + D A+ F M P ++ FN+L A + + A ++
Sbjct: 87 LLKAYAKTSMPDQALKLFQNMFRVFRCRPGIRSFNTLLNAFAESHQWDRAEKFFAYFETA 146
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV P + T N+++ LC ++ ++ G++P T T++N ++ SA
Sbjct: 147 GVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFVKIRDLNSA 206
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGD-TESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ M G +P+ + II+GF K+GD + ++ R + P+ V YN ++
Sbjct: 207 LEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYNIMIS 266
Query: 214 G 214
G
Sbjct: 267 G 267
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + +A+ + + ++G +P++ T NIVIN C R + +
Sbjct: 470 YNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEML 529
Query: 128 KTGLRPTTATLNTIVNGLCLE--NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ G +P T +T+++GLC N +A+ G++P+ +I+ C G
Sbjct: 530 EKGWKPDLITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGK 589
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ A+ M +R+C N V +N IM+G
Sbjct: 590 VQYALQLYWMMRKRNC-ANLVTHNTIMEG 617
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +D+AV F +M P V +N + R + + A ++ G
Sbjct: 473 LIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKG 532
Query: 96 VAPDIYTLNIVINCLCH--LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
PD+ T + +I+ LC + L + G +P N +++ LC V
Sbjct: 533 WKPDLITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQY 592
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A+ M N T I+ GF KIGD E A + E +P+ + YN ++
Sbjct: 593 ALQLYWMMRKRNC-ANLVTHNTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLN 651
Query: 214 G 214
G
Sbjct: 652 G 652
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A + +M+ V N++ + + + L + + G + ++ + N+
Sbjct: 309 LDGARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCG-SRNVVSYNV 367
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+ L + ++V ++ + + T +V+GLC V A+ ++ G
Sbjct: 368 FLKGLFENGKVDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRG 427
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ + ++ING C+ G + A + M +R C+ NA VYNA++DG
Sbjct: 428 DDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDG 476
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 4/181 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRA-HSS 94
L+N ++ L++A+ F +M P V +N + + + + +R
Sbjct: 193 LINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVE 252
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
V P + + NI+I+ LC R L + + + T + +++GLC ++ A
Sbjct: 253 TVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGA 312
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC-EPNAVVYNAIMD 213
M G + + T A++NG CK G + + M +C N V YN +
Sbjct: 313 RKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEM--GNCGSRNVVSYNVFLK 370
Query: 214 G 214
G
Sbjct: 371 G 371
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 75 VARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPT 134
+ + + A+ +++ A G D + + +IN LC R VL L+ K G +
Sbjct: 407 LCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLN 466
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
N +++G N V SAV R M G PN T+ +INGFC+ A C+
Sbjct: 467 AHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVE 526
Query: 195 NMVERHCEPNAVVYNAIMDG 214
M+E+ +P+ + Y+ ++DG
Sbjct: 527 EMLEKGWKPDLITYSTLIDG 546
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 36/215 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN+ D A FF A P V+ +N L + + + A L+ S G
Sbjct: 123 LLNAFAESHQWDRAEKFFAYFETAGVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVG 182
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN------------ 143
+ PD +T +IN +R L V + + G+ P A N I++
Sbjct: 183 MKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGK 242
Query: 144 ------------------------GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
GLC ++ M+ ++ +++T+ A+I+G
Sbjct: 243 MMWERLLRVETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHG 302
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ GD + A MV R + + V NA+++G
Sbjct: 303 LCEGGDLDGARKVYEEMVLRGVKADVVTCNAMLNG 337
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAA-NPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
LL + D A+ F M P ++ FN+L A + + A ++
Sbjct: 87 LLKAYAKTSMPDQALKLFQNMFRVFRCRPGIRSFNTLLNAFAESHQWDRAEKFFAYFETA 146
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV P + T N+++ LC ++ ++ G++P T T++N ++ SA
Sbjct: 147 GVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFVKIRDLNSA 206
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGD-TESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ M G +P+ + II+GF K+GD + ++ R + P+ V YN ++
Sbjct: 207 LEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYNIMIS 266
Query: 214 G 214
G
Sbjct: 267 G 267
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + +A+ + + ++G +P++ T NIVIN C R + +
Sbjct: 470 YNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEML 529
Query: 128 KTGLRPTTATLNTIVNGLCLE--NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ G +P T +T+++GLC N +A+ G++P+ +I+ C G
Sbjct: 530 EKGWKPDLITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGK 589
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ A+ M +R+C N V +N IM+G
Sbjct: 590 VQYALQLYWMMRKRNC-ANLVTHNTIMEG 617
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +D+AV F +M P V +N + R + + A ++ G
Sbjct: 473 LIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKG 532
Query: 96 VAPDIYTLNIVINCLCH--LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
PD+ T + +I+ LC + L + G +P N +++ LC V
Sbjct: 533 WKPDLITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQY 592
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A+ M N T I+ GF KIGD E A + E +P+ + YN ++
Sbjct: 593 ALQLYWMMRKRNC-ANLVTHNTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLN 651
Query: 214 G 214
G
Sbjct: 652 G 652
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A + +M+ V N++ + + + L + + G + ++ + N+
Sbjct: 309 LDGARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCG-SRNVVSYNV 367
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+ L + ++V ++ + + T +V+GLC V A+ ++ G
Sbjct: 368 FLKGLFENGKVDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRG 427
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ + ++ING C+ G + A + M +R C+ NA VYNA++DG
Sbjct: 428 DDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDG 476
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 4/181 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRA-HSS 94
L+N ++ L++A+ F +M P V +N + + + + +R
Sbjct: 193 LINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVE 252
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
V P + + NI+I+ LC R L + + + T + +++GLC ++ A
Sbjct: 253 TVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGA 312
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC-EPNAVVYNAIMD 213
M G + + T A++NG CK G + + M +C N V YN +
Sbjct: 313 RKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEM--GNCGSRNVVSYNVFLK 370
Query: 214 G 214
G
Sbjct: 371 G 371
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D AV F +M N P + +NSL + + + A L+ H+ G
Sbjct: 210 MINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRG 269
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ T N +++ LC + +++ + G++P T +V+GLC + A
Sbjct: 270 QPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDAQ 329
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY + + +ING CK + A+ + M + C PN V + ++
Sbjct: 330 EVYQILLIKGYHLDVRMYTVMINGLCKESLFDKALSLLSKMKDNGCTPNPVTFEILI 386
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
A + +M+A FP V +N+L F V + K AI L+ ++P++ T N
Sbjct: 83 AFDLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQ---AIDLLNEMLLKNISPNVVTFNT 139
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ LC VL + K G+ T + +++G L V A M G
Sbjct: 140 LVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVRRG 199
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N +++ +ING CK + AV + M ++ P+ V YN+++DG
Sbjct: 200 VTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDG 248
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +K ++ A F+ M+ V + + + + K A++L K H
Sbjct: 175 LMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKN 234
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+APDI T N +I+ L R + ++ + G T N++++ LC + V A+
Sbjct: 235 MAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAI 294
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
T +++ G QP YT+ +++G CK G + A
Sbjct: 295 TLFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDA 328
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL + + AI+L + G+ P IYT I+++ LC R V ++
Sbjct: 277 YNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDAQEVYQILL 336
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G ++NGLC E+ A++ M++ G PN TF +I + +
Sbjct: 337 IKGYHLDVRMYTVMINGLCKESLFDKALSLLSKMKDNGCTPNPVTFEILIRALFENDMND 396
Query: 188 SAVLCMRNMVER 199
AV +R M+ R
Sbjct: 397 KAVELLRKMIVR 408
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC T + VL + ++P +TI+ LC + V A M
Sbjct: 35 LIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMR 94
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ +I GFC +G + A+ + M+ ++ PN V +N ++DG
Sbjct: 95 IFPNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDG 143
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 142 VNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
+ GLCL V A+ F + +Q N ++G +I+G CK G+T +A+ +RN+
Sbjct: 1 MKGLCLNGKVKEALYFHDDVIAKEFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLV 60
Query: 202 EPNAVVYNAIM 212
+PN V+Y+ I+
Sbjct: 61 QPNVVMYSTII 71
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 64/152 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V ++++ + + K A L + + P++ T N +I C + + + +
Sbjct: 62 PNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDL 121
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + P T NT+V+GLC E + A M G + N T+ +++G+
Sbjct: 122 LNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFL 181
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + A MV R N Y +++G
Sbjct: 182 VKEVNKATFVFNTMVRRGVTSNVHSYTVMING 213
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%)
Query: 77 RTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTA 136
+ K A++L + H + P++ T N +IN LC R ++ L ++ + G P
Sbjct: 107 KIKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALELVDEMHDRGQPPNII 166
Query: 137 TLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
T N+I++ LC +V A+ F +++ QP+ YT+ +I G CK+G + A +
Sbjct: 167 TYNSILDVLCKNYDVDKAIVFLTKLKDQDIQPSMYTYNILIYGLCKVGRLKDARKVFEYL 226
Query: 197 VERHCEPNAVVYNAIMDG 214
+ + C +A Y ++ G
Sbjct: 227 LVKGCSLDAYTYTIMIHG 244
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M FP V +NSL + R+ + A+ L+ H G
Sbjct: 101 MINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALELVDEMHDRG 160
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T N +++ LC + L + ++P+ T N ++ GLC + A
Sbjct: 161 QPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQDIQPSMYTYNILIYGLCKVGRLKDAR 220
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIG 184
++ G ++YT+ +I+GFC G
Sbjct: 221 KVFEYLLVKGCSLDAYTYTIMIHGFCSKG 249
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKR-----AHSSGVAP 98
K ++ V + +M+ P + +N+L A L++ GV P
Sbjct: 34 KLVNDVVDLYSEMVTKRISPNIVTYNTLIHGFCIVGQLNDAFGLLQLFIFGIMARKGVTP 93
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
D + I+IN C ++ +++ + + P T N+++NGLC ++ A+
Sbjct: 94 DTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALELV 153
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G PN T+ +I++ CK D + A++ + + ++ +P+ YN ++ G
Sbjct: 154 DEMHDRGQPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQDIQPSMYTYNILIYG 209
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN+++ + +DAA M + P + ++ SL + + +AA+S+++
Sbjct: 566 LLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTEKN 625
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ N +I L L + +V + + GL P T NTI+N C++ N+ A+
Sbjct: 626 TRFDVVACNTLIKGLLRLGKYD-PQNVCSRMIELGLAPNCVTYNTIINSYCIKGNIEDAL 684
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
M++ G PN+ T+ +I G CK GD + A + M+ P + +
Sbjct: 685 GILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVVPTPITHK 738
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A FF +M P + ++ + ++ A +L + GV+ DI T
Sbjct: 366 LTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVSFDIVTCTT 425
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ L +R+T + + K L P T + +++G C + A + M+
Sbjct: 426 IMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEH 485
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN TF +IING+ K G AV +R MV+R+ PN VY ++D
Sbjct: 486 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILID 533
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ +++ QM+ V +S+ + R A K + G+ P+ +
Sbjct: 331 VEESLSLSEQMIMNGIMSDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYAT 390
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN L R ++ + G+ T TI++GL A +
Sbjct: 391 IINSLFKSGRVMEAFNLQSQMVVRGVSFDIVTCTTIMDGLFKVRKTKEAEEMFETILKLN 450
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ A+++G+CK+G+ E A L ++ M + H PN + +++I++G
Sbjct: 451 LAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSSIING 499
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 63/146 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L T + R A ++ G++ D T N +I C +F
Sbjct: 772 YNTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMF 831
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T NT++ GL + R M+ G+ PN+ T+ +++G+ ++G+ E
Sbjct: 832 VDGISPNITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKE 891
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
+ R M+ + P YN +++
Sbjct: 892 ESTKFYREMLTKGFVPTTGTYNVLIN 917
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Query: 82 AAAISLIKRAHSS----GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTAT 137
+ +S +K +S GV PD++++N++++ LC + L L + T
Sbjct: 103 SGLVSQVKVMYSDMVFCGVVPDVFSVNVLVHSLCKVGDLDLALGYL----RNNDVIDNVT 158
Query: 138 LNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMV 197
NT++ G C + V M G +S T ++ G+C+IG A M N+V
Sbjct: 159 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEWVMYNLV 218
Query: 198 ERHCEPNAVVYNAIMDG 214
+ + + N ++DG
Sbjct: 219 DGGVTKDVIGLNTLIDG 235
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 64/169 (37%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A ++ML P L +R K + + + G+ + N
Sbjct: 715 VQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNT 774
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC L T VL + K G+ T N ++ G C ++V A M G
Sbjct: 775 LITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDG 834
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ ++ G G + +R M ER PNA Y+ ++ G
Sbjct: 835 ISPNITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSG 883
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 1/147 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN +F F + + ++ + + P + T +I+ C LS+ +
Sbjct: 284 FNEIFAF-QKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEESLSLSEQMI 342
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ T ++I+ LC + A F + M G PN ++ IIN K G
Sbjct: 343 MNGIMSDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVM 402
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A MV R + V IMDG
Sbjct: 403 EAFNLQSQMVVRGVSFDIVTCTTIMDG 429
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ ++ S G+ P+ T NI+I LC VL + G+ PT T +V
Sbjct: 683 ALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVVPTPITHKFLVK 742
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
+ + + + G + + +I C++G T A + + MV+R
Sbjct: 743 AYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTRKAKVVLDEMVKRGISA 802
Query: 204 NAVVYNAIMDG 214
+ V YNA++ G
Sbjct: 803 DYVTYNALIRG 813
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + +D A F +M P + FN+L + A L++ +
Sbjct: 422 LIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENR 481
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI+T + +I+ LC L+RT + + G+ P N ++ LC +V
Sbjct: 482 LKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSV 541
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R M+ G P+ Y++ A+I FC++ E A +M + P+ Y+A +
Sbjct: 542 KLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFI 598
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 55 QMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
+ML N P + F+ + + R K A GV P+ NI+I LC +
Sbjct: 475 EMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSI 534
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
T + +L + + G+ P + N ++ C N V A M +G+ P++YT+
Sbjct: 535 GETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTY 594
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
A I + G E A +M C P++
Sbjct: 595 SAFIAALSESGRLEEAKKMFYSMEANGCSPDS 626
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%)
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL 145
+ H SG L ++++ L + + V G + G+ PTT N++++ L
Sbjct: 120 EFLNDVHKSGFKVSEDLLCVLMSSWGRLGLARYCVDVFGQISFLGISPTTRLYNSLIDAL 179
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
N++ A + + M P+ T+ +I+G CKIG + A+ +R M ++ PN
Sbjct: 180 VKSNSIDLAYSKFQQMVGDHCFPDRITYNVLIHGVCKIGVVDEALRLIRQMKDKGLFPNV 239
Query: 206 VVYNAIMDG 214
Y ++DG
Sbjct: 240 FTYTILIDG 248
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 37/210 (17%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++++ ++D A + F QM+ + FP +N L V + A+ LI++ G
Sbjct: 175 LIDALVKSNSIDLAYSKFQQMVGDHCFPDRITYNVLIHGVCKIGVVDEALRLIRQMKDKG 234
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL---------- 145
+ P+++T I+I+ C+ +R VL ++ ++ + AT+ T+V+G+
Sbjct: 235 LFPNVFTYTILIDGFCNAKRVDEAFGVLDMMKESRVCANEATIRTLVHGVFRCVDPSKAF 294
Query: 146 -------------------------CLENN--VASAVTFTRHMENAGYQPNSYTFGAIIN 178
CL NN V F R GY P+S F I+
Sbjct: 295 VLLSEFLDREEDFCSGKLACDTVLYCLANNSMAKEMVVFIRKALARGYVPDSSVFNVIMA 354
Query: 179 GFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
K + A +R +P Y
Sbjct: 355 CLVKRAELREACEIFEIFTKRGVKPGIGTY 384
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ + LK + A F++M+ P +N L + ++ L++R G
Sbjct: 492 IIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEG 551
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PDIY+ N +I C + + + + K+G P T + + L + A
Sbjct: 552 ISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAK 611
Query: 156 TFTRHMENAGYQPNSY 171
ME G P+SY
Sbjct: 612 KMFYSMEANGCSPDSY 627
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%)
Query: 50 VAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINC 109
V F + LA P FN + + + A + + GV P I T +
Sbjct: 331 VVFIRKALARGYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGVKPGIGTYLTLAEA 390
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
L + G + + GL + N +++ C + + A M+ G+ PN
Sbjct: 391 LYKDEQRDEGDQISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPN 450
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
TF +ING CK G A + ++E +P+ ++ I+DG
Sbjct: 451 LVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDG 495
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 23/198 (11%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
+++S+ K + A + QM+ P V FNSL F FV + A L
Sbjct: 131 IIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCFVGQ---LIEAFGLFHEMV 187
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT-----------------GLRPTT 135
+ P++YT NI+++ LC ++L ++ K G+ P
Sbjct: 188 LKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVLSTITQMGVPPDA 247
Query: 136 ATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRN 195
+ N ++NG C V A + M G PN+ T+ ++I+G CK+G A +
Sbjct: 248 QSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDE 307
Query: 196 MVERHCEPNAVVYNAIMD 213
M + +P+ YN+++D
Sbjct: 308 MRDNGQQPDICTYNSLID 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+L F S+ + K G PTT T NT++NG+CL A+ F HM + N
Sbjct: 32 NLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQV 91
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
T+ +ING CK+G T A+ +R + + N +++N I+D
Sbjct: 92 TYAILINGLCKMGKTTEALQFLRKIDGKLVNINVLMHNTIID 133
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 28/186 (15%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLI-----------KRAH-- 92
L A FH+M+ N P V FN L + + + A +L+ K H
Sbjct: 176 LIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVL 235
Query: 93 ----SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
GV PD + NI+IN C ++ S+ + G+ P T T +++++GLC
Sbjct: 236 STITQMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKL 295
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
++ A M + G QP+ T+ ++I+ CK + V++ + + Y
Sbjct: 296 GRISYAWELVDEMRDNGQQPDICTYNSLIDALCK-----------NHHVDQGIQLDMYTY 344
Query: 209 NAIMDG 214
N ++DG
Sbjct: 345 NILIDG 350
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K ++ A + F++M P ++SL + + + A L+ +G
Sbjct: 253 MINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNG 312
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T N +I+ LC G++ T N +++GLC + + A
Sbjct: 313 QQPDICTYNSLIDALCKNHHV-----------DQGIQLDMYTYNILIDGLCKQGRLKDAQ 361
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ + GY +T+ +ING C G + A + M + C P+AV I+
Sbjct: 362 VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGCVPDAVTCETII 418
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR--TAFGLSVLGLV 126
N++ + + K A L + ++PD+ T N +I C + + AFGL +V
Sbjct: 129 NTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCFVGQLIEAFGL-FHEMV 187
Query: 127 FKTGLRPTTATLNTIVNGLCLENNVASA-------------VTFTRH----MENAGYQPN 169
K + P T N +V+ LC E NV A V +H + G P+
Sbjct: 188 LKN-INPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVLSTITQMGVPPD 246
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ +INGFCKI A M R PN V Y++++DG
Sbjct: 247 AQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDG 291
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
+L + A + F ++L P FN+L + + A+ + +
Sbjct: 32 NLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQV 91
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T I+IN LC + +T L L + + NTI++ LC E V A M
Sbjct: 92 TYAILINGLCKMGKTTEALQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQM 151
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ TF ++I GFC +G A MV ++ PN +N ++D
Sbjct: 152 IVKKISPDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVD 203
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + + +D A+ ++A P + +N L T + + AI L K G
Sbjct: 214 LIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKG 273
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P + + NI++ LC+ R ++ + + G P+ T N ++ L ++ + A
Sbjct: 274 FKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAF 333
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
M +G++ ++ ++ II CK G + V C+ M+ R N YNAI
Sbjct: 334 KVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAI 389
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV M+++ P + L ++ R + A+ L+++ ++G + T N ++
Sbjct: 122 AVRVMEIMVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVK 181
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC + + +L + K GL P T + ++ E V A+ + G +P
Sbjct: 182 GLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKP 241
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N ++ ++ G CK G TE A+ + + E+ +P V +N ++
Sbjct: 242 NLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILL 285
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A Q++ P V L + R+ A+ +++ SSG+ PD +
Sbjct: 84 LNDAFLQLEQIVGKGNKPEVTQATQLLYDLCRSGKARKAVRVMEIMVSSGIIPDAASYTF 143
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N LC + + ++ + G T T NT+V GLC+ + ++ + G
Sbjct: 144 LVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKG 203
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN T+ +I K + A+ + +++ + +PN V YN ++ G
Sbjct: 204 LVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTG 252
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Query: 55 QMLAANPFPC-VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
+ + AN FP +N+L + ++ ++ R G+ P++ T +I+I
Sbjct: 162 EKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKE 221
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
R + +L + G +P + N ++ GLC E A+ + + G++P +
Sbjct: 222 RGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSH 281
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ C G + A M M P+ V YN ++
Sbjct: 282 NILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLI 320
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
VI LC T +L + G P + T ++++ G+C E + A+ +E G
Sbjct: 423 VITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHG 482
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
Y P+ + A+I G CK + ++ + MV + C PN + YN +++
Sbjct: 483 YVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNILVE 530
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ ++ +++ P V ++ L + + A+ L+ + G P++ + N+
Sbjct: 189 LNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNV 248
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ LC RT + + + + G +P + N ++ LC E A M+ G
Sbjct: 249 LLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDG 308
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ +I G E A + M + + +A YN I+
Sbjct: 309 QAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPII 355
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 49/119 (41%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
+P + ++ T + R + A ++ G PD YT + +I +C L
Sbjct: 414 YPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQ 473
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+ G++ + G P N ++ GLC + ++ + M N G PN T+ ++
Sbjct: 474 IFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNILVEAL 532
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
L + A + F++M+ + P V FN+L + ++A+ + K+ G PD+ T
Sbjct: 277 LSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVT 336
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+I+ C + + +GL + + T + I++ LC N + A R +
Sbjct: 337 FTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLRLLN 396
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ P ++ + +I+G+CK G+ + A + +M E+ C+P+ + + ++ G
Sbjct: 397 QSEIVPQAFIYNPVIDGYCKSGNVDEANAIVVDM-EKKCKPDKLTFTILIIG 447
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A F + M P V +N+L T + R A L+K +S P+ + I
Sbjct: 214 IDEAFRFLNDMRNFGCCPDVVSYNTLMTGLCRVNDVDRARDLLKEINS----PNDVSYMI 269
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
VI+ C L S+ + ++G++P+ A+ N +++G +++SAV + M G
Sbjct: 270 VISGYCKLSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHG 329
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ TF ++I+G+C++G + + M R+ N Y+ I+
Sbjct: 330 CDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIII 376
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD AV+ F +++ N FN L A + + G PD+ + N
Sbjct: 179 LDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPDVVSYNT 238
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ LC + +L K P + +++G C +N+ A + M +G
Sbjct: 239 LMTGLCRVNDVDRARDLL----KEINSPNDVSYMIVISGYCKLSNMKEASSIFNEMVRSG 294
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
QP+ +F A+I+GF K GD SAV + M+ C+P+ V + +++DG
Sbjct: 295 VQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVTFTSLIDG 343
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 1/161 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ +AV +M+ P V F SL R + L + + ++YT +I
Sbjct: 315 ISSAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSI 374
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ LC R +L L+ ++ + P N +++G C NV A ME
Sbjct: 375 IISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVIDGYCKSGNVDEANAIVVDMEKKC 434
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
+P+ TF +I G C G A+ M+ C P+ V
Sbjct: 435 -KPDKLTFTILIIGHCMKGRAYEAIGIFYRMLATGCSPDDV 474
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N LF + R + +A L S G+ PD L I+++ + R ++
Sbjct: 96 YNFLFRSLCRESQHNSAKILYDVMRSDGLLPDGRLLGILVSSFAFVGRFDVCKEIVNDCL 155
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ + N I+N L + AV+ R + +S+TF +I GFC G+ +
Sbjct: 156 RNSVDVNVVVYNNILNILVKCGRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEID 215
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + +M C P+ V YN +M G
Sbjct: 216 EAFRFLNDMRNFGCCPDVVSYNTLMTG 242
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + + +D A+ ++A P + +N L T + + AI L K G
Sbjct: 89 LIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKG 148
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P + + NI++ LC+ R ++ + + G P+ T N ++ L ++ + A
Sbjct: 149 FKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAF 208
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
M +G++ ++ ++ II CK G + V C+ M+ R N YNAI
Sbjct: 209 KVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAI 264
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+++ P + L ++ R + A+ L+++ ++G + T N ++ LC +
Sbjct: 4 MVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGK 63
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ +L + K GL P T + ++ E V A+ + G +PN ++
Sbjct: 64 LNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNV 123
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ G CK G TE A+ + + E+ +P V +N ++
Sbjct: 124 LLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILL 160
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
SSG+ PD + ++N LC + + ++ + G T T NT+V GLC+ +
Sbjct: 6 SSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLN 65
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ + G PN T+ +I K + A+ + +++ + +PN V YN ++
Sbjct: 66 QSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLL 125
Query: 213 DG 214
G
Sbjct: 126 TG 127
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Query: 55 QMLAANPFPC-VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
+ + AN FP +N+L + ++ ++ R G+ P++ T +I+I
Sbjct: 37 EKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKE 96
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
R + +L + G +P + N ++ GLC E A+ + + G++P +
Sbjct: 97 RGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSH 156
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ C G + A M M P+ V YN ++
Sbjct: 157 NILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLI 195
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
VI LC T +L + G P + T ++++ G+C E + A+ +E G
Sbjct: 298 VITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHG 357
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
Y P+ + A+I G CK + ++ + MV + C PN + YN +++
Sbjct: 358 YVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNILVE 405
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ ++ +++ P V ++ L + + A+ L+ + G P++ + N+
Sbjct: 64 LNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNV 123
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ LC RT + + + + G +P + N ++ LC E A M+ G
Sbjct: 124 LLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDG 183
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ +I G E A + M + + +A YN I+
Sbjct: 184 QAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPII 230
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ ++ +G+ P A+ +VN LC NV A+ ME G+ N+ T+ ++ G C
Sbjct: 1 MEIMVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCM 60
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G ++ + ++++ PN V Y+ +++
Sbjct: 61 YGKLNQSMQILDRLIKKGLVPNVVTYSILIE 91
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 49/119 (41%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
+P + ++ T + R + A ++ G PD YT + +I +C L
Sbjct: 289 YPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQ 348
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+ G++ + G P N ++ GLC + ++ + M N G PN T+ ++
Sbjct: 349 IFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNILVEAL 407
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F+ + P + + +L + R K + + SL+ + +GV PD N +IN
Sbjct: 62 AVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMIN 121
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM-ENAGYQ 167
+ + + + + G +PTT+T NT++ G + A+ M ++ +
Sbjct: 122 AFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVK 181
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
PN T+ +I +C + E A M MV +P+ V YN +
Sbjct: 182 PNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTL 225
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 9/185 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
++N+ + A+ F +M P FN+L F V R A+ L++
Sbjct: 119 MINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHE---AMKLLEMMI 175
Query: 93 SSG-VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCL--EN 149
G V P+ T NI+I C +V+ + +G++P T NT+ E
Sbjct: 176 QDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGET 235
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
+ A + N +PN T G II G+CK G+ A+ + M E PN VV+N
Sbjct: 236 DNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFN 295
Query: 210 AIMDG 214
+++ G
Sbjct: 296 SLIKG 300
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Query: 49 AVAFFHQMLA-ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
A+ M+ N P + +N L A +++ + +SG+ PDI T N +
Sbjct: 167 AMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLA 226
Query: 108 NCLCHLRRT--AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
T A L + + ++P T I+ G C E N+ A+ F M+ G
Sbjct: 227 RAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELG 286
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN F ++I G+ I DT+ + M E +P+ V Y+ IM+
Sbjct: 287 VHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMN 334
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 69 NSLFTFVARTKHYA---------AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFG 119
NS T ++RTK + A+++ G P I T ++ L L+R
Sbjct: 38 NSCQTVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSI 97
Query: 120 LSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
S+L V + G++P + N ++N V A+ R M+ G +P + TF +I G
Sbjct: 98 PSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKG 157
Query: 180 FCKIGDTESAVLCMRNMVER-HCEPNAVVYNAIMD 213
F +G A+ + M++ + +PN YN ++
Sbjct: 158 FGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQ 192
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F+ + P + + +L + R K + + SL+ + +GV PD N +IN
Sbjct: 62 AVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMIN 121
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM-ENAGYQ 167
+ + + + + G +PTT+T NT++ G + A+ M ++ +
Sbjct: 122 AFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVK 181
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
PN T+ +I +C + E A M MV +P+ V YN +
Sbjct: 182 PNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTL 225
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 9/185 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSL---FTFVARTKHYAAAISLIKRAH 92
++N+ + A+ F +M P FN+L F V R A+ L++
Sbjct: 119 MINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHE---AMKLLEMMI 175
Query: 93 SSG-VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCL--EN 149
G V P+ T NI+I C +V+ + +G++P T NT+ E
Sbjct: 176 QDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGET 235
Query: 150 NVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
+ A + N +PN T G II G+CK G+ A+ + M E PN VV+N
Sbjct: 236 DNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFN 295
Query: 210 AIMDG 214
+++ G
Sbjct: 296 SLIKG 300
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Query: 49 AVAFFHQMLA-ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
A+ M+ N P + +N L A +++ + +SG+ PDI T N +
Sbjct: 167 AMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLA 226
Query: 108 NCLCHLRRT--AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
T A L + + ++P T I+ G C E N+ A+ F M+ G
Sbjct: 227 RAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELG 286
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN F ++I G+ I DT+ + M E +P+ V Y+ IM+
Sbjct: 287 VHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMN 334
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 69 NSLFTFVARTKHYA---------AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFG 119
NS T ++RTK + A+++ G P I T ++ L L+R
Sbjct: 38 NSCQTVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSI 97
Query: 120 LSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
S+L V + G++P + N ++N V A+ R M+ G +P + TF +I G
Sbjct: 98 PSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKG 157
Query: 180 FCKIGDTESAVLCMRNMVER-HCEPNAVVYNAIMD 213
F +G A+ + M++ + +PN YN ++
Sbjct: 158 FGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQ 192
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V +N + + K A++L + H + PD+ T N +I+ +C + ++ L ++
Sbjct: 10 VSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKISYALKLVD 69
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ G P T N+I+N LC + V A+ +++ G +PN YT +I+G
Sbjct: 70 EMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIYTHTILIDG----- 124
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIM 212
A+ + M + +C PNAV Y I+
Sbjct: 125 ----ALALLSKMKDNNCYPNAVTYRIII 148
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M N P V +NSL + ++ + A+ L+ + G
Sbjct: 16 MINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKISYALKLVDEMNDRG 75
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI T N ++N LC + +++L + G+RP T +++G A+
Sbjct: 76 QLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIYTHTILIDG---------AL 126
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
M++ PN+ T+ II D + A ER CE
Sbjct: 127 ALLSKMKDNNCYPNAVTYRIIIRSLFDKNDNDKA--------ERLCE 165
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 61/122 (50%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
S GV D+ + NI+IN C +++ +++ + + P T N++++G+C ++
Sbjct: 3 SRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKIS 62
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A+ M + G P+ T+ +I+N CK + A+ + + ++ PN + ++
Sbjct: 63 YALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIYTHTILI 122
Query: 213 DG 214
DG
Sbjct: 123 DG 124
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 73.6 bits (179), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 41 RSLKTLDAAVAF---FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVA 97
R K +AAV F + L N NSLF ++ A +L + G++
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF----KSGRVMEAFNLQSQMVVRGIS 423
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
DI T V++ L + +T V + K L P T + +++G C + A
Sbjct: 424 FDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELV 483
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ME PN TF +IING+ K G AV +R MV+R+ PN +VY ++DG
Sbjct: 484 LQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 1/173 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN+++ + +D A + M + P + ++ SL + + AA+S+++
Sbjct: 572 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 631
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D+ N +I L L + V + + GL P T NTI+N C++ A+
Sbjct: 632 IRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL 690
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
M++ G PN+ T+ +I G CK G E A + M+ P + +
Sbjct: 691 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITH 743
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 71/164 (43%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+ + +M+ P V +S+ R A L + + G+ P+ + +IN L
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
R ++ + G+ T T+++GL A + PN
Sbjct: 402 FKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNC 461
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ A+++G+CK+G E A L ++ M + H PN + +++I++G
Sbjct: 462 VTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505
Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 75/202 (37%), Gaps = 36/202 (17%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA++ +M N V +N+L + R Y + R G+APD T N +I
Sbjct: 619 AALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTII 677
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
N C +T L +L + G+ P T N ++ GLC V A + M +
Sbjct: 678 NTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFV 737
Query: 168 PNSYT-----------------------------------FGAIINGFCKIGDTESAVLC 192
P T + +I FC++G T A +
Sbjct: 738 PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVV 797
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+ MV+R + V YNA++ G
Sbjct: 798 LDEMVKRGISADLVTYNALIRG 819
Score = 53.9 bits (128), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSL-FTFVARTKHYAAAISLIKRAHSS----GVAPDI 100
A A F M A P + +N+L + F A + +S +K +S GV PD+
Sbjct: 75 FSTASATFSHMRALGLVPTLPFWNTLLYQFNA-----SGLVSQVKLMYSDMLFCGVVPDV 129
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
+++N++++ LC + L L + T NT++ G C + V
Sbjct: 130 FSVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSE 187
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +S T ++ G+C+IG + A M N+V+ + + N ++DG
Sbjct: 188 MVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 1/147 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+ L + R A SLI +S G+ PDI +I+ LS++ +
Sbjct: 569 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ +R N ++ GL +R +E G P+ T+ IIN +C G TE
Sbjct: 629 EKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE-LGLAPDCITYNTIINTYCIKGKTE 687
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ + M PNAV YN ++ G
Sbjct: 688 DALDILNEMKSYGIMPNAVTYNILIGG 714
Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 64 CVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL 123
C + LF V +TK I + + +AP+ T + +++ C L + VL
Sbjct: 429 CTTVMDGLFK-VGKTKEAEEVFETILKLN---LAPNCVTYSALLDGYCKLGKMELAELVL 484
Query: 124 GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
+ K + P T ++I+NG + ++ AV R M PN+ + +I+G+ K
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
G+ + A + M R E + V+++ +++
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLN 574
Score = 51.2 bits (121), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L T R A ++ G++ D+ T N +I C L +F
Sbjct: 778 YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMF 837
Query: 128 KTGLRPTTATLNTIVNGLC----LENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
G+ P T NT++ GL +E + M G PN+ T+ +++G+ ++
Sbjct: 838 VDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV 897
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+ + ++ M+ + P YN ++
Sbjct: 898 GNRKKTIILHIEMITKGFVPTLKTYNVLI 926
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 43/117 (36%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
P + T +I C S+ + G+ P T ++I+ G C + A
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
R M G PN ++ IIN K G A MV R + V +MDG
Sbjct: 379 FREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435
Score = 48.1 bits (113), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 6/158 (3%)
Query: 61 PFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGL 120
P P F L +R++ + + ++ +SG+ + N +I C L T
Sbjct: 738 PTPITHKF--LVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 795
Query: 121 SVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
VL + K G+ T N ++ G C ++V A+ M G PN T+ ++ G
Sbjct: 796 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 855
Query: 181 CKIGDTESAVLCMRNMV----ERHCEPNAVVYNAIMDG 214
G E + +V ER PNA Y+ ++ G
Sbjct: 856 SNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSG 893
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 49 AVAFFHQMLA-ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
A+ ML N P ++ +N L + ++ + + A +++ + +SG+ PD T N +
Sbjct: 198 AMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMA 257
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
TA +++ + + GL P T IVNG E + A+ F +++ G++
Sbjct: 258 IGYVLNSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFK 317
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN F +INGF D + +R M E +P+ V Y+ IM+
Sbjct: 318 PNLLVFNVLINGFVDRMDRDGVDEVLRLMKEFQIQPDVVTYSTIMN 363
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N+ ++ A +M + P +++L A+ L+ + G
Sbjct: 150 VINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDG 209
Query: 96 -VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
PD+ T N++I LC + +++ + +G+ P + T NT+ G L + A A
Sbjct: 210 NSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEA 269
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ G +PN TF I+NG+ K G + A+ + + + +PN +V+N +++G
Sbjct: 270 EAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLING 329
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
SGV PD++ +I++ T +LG + ++G+RP T +++G +
Sbjct: 383 QSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMD 442
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+A+ M G PN TF A+I G+ K + ++ M E H P +
Sbjct: 443 NAIKIFDKMCELGVSPNLRTFEALIWGYAKADQPWKSEEILQLMEEFHVHPKKSTF 498
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ A + + A +++ SG P T + +I + ++ + +L L+
Sbjct: 147 YNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLML 206
Query: 128 KTG-LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
G +P T N ++ LC N++ A M +G P+S TF + G+ +T
Sbjct: 207 TDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSET 266
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + M + EPN + I++G
Sbjct: 267 AEAEAMILEMQRKGLEPNERTFTVIVNG 294
>Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24897577-24898734 | 20130731
Length = 202
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + K +D AV F ++ N P + ++SL + ++ + LI H G
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRG 60
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
DI +++ L + +++L + G+ P T +V+GLC + A
Sbjct: 61 QQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQ 120
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R + GY N+ +ING CK G + A+ + M + C P+ V Y ++
Sbjct: 121 EVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLI 177
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ SL + + AI+L+K+ G+ PD++T ++++ LC R V +
Sbjct: 68 YTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLM 127
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G N ++NGLC E A+ ME+ G P+ T+ +I K +
Sbjct: 128 VKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLIRALFKNDMND 187
Query: 188 SAVLCMRNMVER 199
AV +R M+ R
Sbjct: 188 KAVKLLREMLSR 199
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 69/138 (50%)
Query: 77 RTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTA 136
+ K A++L K H +APDI + +I+ LC + + ++ + G +
Sbjct: 7 KNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADII 66
Query: 137 TLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
++++ L + V A+ + +++ G +P+ +T+ +++G CK G + A R++
Sbjct: 67 IYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDL 126
Query: 197 VERHCEPNAVVYNAIMDG 214
+ + NA ++N +++G
Sbjct: 127 MVKGYHFNACMHNVMING 144
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N L AA + +M+ P F +L + + A L + +
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+AP +YT +I LC A + + + ++PT T N ++ G C +N+ A
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G P++YT+ +I+G C G +A + ++ +++ + N + Y+A++ G
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHG 612
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ +R +D+A ++ P + +N+L + + + A L K HS
Sbjct: 329 LVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMN 388
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ + T +I+I+ C S G + + G+R T N+++NG C ++++A
Sbjct: 389 LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAE 448
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M N G +P + TF +I+G+CK E A R M E+ P+ + A++ G
Sbjct: 449 FLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYG 507
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 71/166 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV ML P V+ +++ + R + + + + ++GV PD YT + VI
Sbjct: 167 AVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIR 226
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC L+ + + + T N +++GLC V A+ + + G +
Sbjct: 227 SLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKE 286
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ ++ GFC++ + + M MVE P + ++DG
Sbjct: 287 DVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDG 332
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + + A+ + K G+ D+ T ++ C +++ G+ ++ +
Sbjct: 256 YNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMV 315
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G PT A ++ +V+GL + N+ SA + G+ PN + + A+IN CK D +
Sbjct: 316 ELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLD 375
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A L +NM + N V Y+ ++D
Sbjct: 376 KAELLYKNMHSMNLPLNDVTYSILID 401
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A + +M P V F +L + T A A L + P T N+
Sbjct: 479 VEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNV 538
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I C +L + GL P T T +++GLC V++A F +
Sbjct: 539 MIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKN 598
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ N + A+++G+C G A+ M++R + V + ++DG
Sbjct: 599 LKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDG 647
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 1/171 (0%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
+N + + +D A F +ML AN P + + + + A L G+
Sbjct: 715 MNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL-HHEMLKGL 773
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
+ T NI+I C L R VL + + G+ P T +TI+ C +V +AV
Sbjct: 774 LANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVV 207
M G +P+S F +I G C G + A +M+ R +P ++
Sbjct: 834 LWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQIL 884
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 81/214 (37%), Gaps = 35/214 (16%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + S + A F +M+ P +N + + + A L++ +G
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD YT +I+ LC R + + + K L+ + +++G C + + A+
Sbjct: 564 LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623
Query: 156 T-----------------------------------FTRHMENAGYQPNSYTFGAIINGF 180
+ + M + G +P+S + ++I+ +
Sbjct: 624 SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAY 683
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
K G + + C+ MV C PN V Y A M+G
Sbjct: 684 SKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M+ FP V + + + + A L ++ ++ ++P+ T ++ L
Sbjct: 699 MVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGN 758
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+ + K GL TAT N ++ G C + A M G P+ T+
Sbjct: 759 MKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYST 817
Query: 176 IINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
II C+ GD +AV M+ + EP++V +N ++ G
Sbjct: 818 IIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYG 856
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN+ R A+ L G+ D++T NI+ N LC L R +L +
Sbjct: 395 FNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMV 454
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G++P T + C E N+A A R ME G PN T+ +I+ +CK +
Sbjct: 455 EKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVK 514
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A M+ + P+ Y++++ G
Sbjct: 515 QAHKIKSEMINKGLLPDLYTYSSLIHG 541
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R L + A A F +M + P + +L V + AA L+ S GV ++
Sbjct: 333 RRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNL 392
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
N ++ C + L + ++ K G+ T N + NGLC + A
Sbjct: 393 VIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNS 452
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G +PN TF I +CK G+ A R+M ++ PN + YN ++D
Sbjct: 453 MVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDA 506
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + + Y A ++ GV P++ T + I C A + +
Sbjct: 430 YNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDME 489
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
K G P T NT+++ C + V A M N G P+ YT+ ++I+G C +G +
Sbjct: 490 KKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVD 549
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ M + N Y +++ G
Sbjct: 550 EALKLFNEMRLKGITRNVATYTSMISG 576
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L N + L D A + M+ P V F + + A A L + G
Sbjct: 433 LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P+I T N +I+ C + + + GL P T +++++G C+ V A+
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEAL 552
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M G N T+ ++I+G K G + A M++ P+ V+ +++
Sbjct: 553 KLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPC-VKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
LL +++ +D V FFH+M+ +N F V+ + + R A L+
Sbjct: 186 LLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGK 245
Query: 95 G-VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
G V P+++T N ++N + +L L+ K + + AT + ++ ++
Sbjct: 246 GIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEE 305
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M + + Y + ++I+ ++G+ + A M +R PNA Y A++
Sbjct: 306 AEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIG 365
Query: 214 G 214
G
Sbjct: 366 G 366
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKR-AHSSGVAP 98
+R+LKT F ++ + P V+ N+L + + K Y A + K V P
Sbjct: 137 VRALKT-------FLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLP 189
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
++ + NI++ LC + VL + GL P + T++ G ++ A+
Sbjct: 190 NVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVF 249
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R + + G+ P+ ++ +++GFC++G A+ M M + EPN V Y ++
Sbjct: 250 REVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQ 304
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 127 FKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
F G + T NT++ GLC + A M G PN++T+ +I GFCK+G+
Sbjct: 393 FGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNA 452
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + + M+E C PN Y ++DG
Sbjct: 453 KEGIRVLEEMLENRCLPNKSTYTILIDG 480
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT-GLR----PTTATL 138
A+ R S G+ P + ++N ++N L +R LVFK G R P +
Sbjct: 139 ALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAF----LVFKNCGERFRVLPNVVSC 194
Query: 139 NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
N ++ LC N V AV M G PN ++ ++ GF GD + A+ R +++
Sbjct: 195 NILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLD 254
Query: 199 RHCEPNAVVYNAIMDG 214
R P+ Y ++DG
Sbjct: 255 RGWSPDVTSYTVLVDG 270
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 55/138 (39%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
P V N L + + A+ ++ G+ P++ + V+ +
Sbjct: 188 LPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMK 247
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
V V G P + +V+G C + A+ ME+ G +PN T+G +I +C
Sbjct: 248 VFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYC 307
Query: 182 KIGDTESAVLCMRNMVER 199
K + AV + +M+ +
Sbjct: 308 KEKKSGEAVNLIEDMIAK 325
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AA +ML N P + +L R A L + S G+ P + N++I
Sbjct: 468 AAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMI 527
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
LC + +S + + P T +T+++G ++++ SA+ M Y+
Sbjct: 528 KGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYK 587
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN + ++INGFCKI D A R M + EPN V Y ++ G
Sbjct: 588 PNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGG 634
Score = 71.6 bits (174), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F +++ P V +N + + + A+S + + + APD YT +
Sbjct: 501 LDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST 560
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
VI+ L + G + K +P +++NG C +++ A R M++
Sbjct: 561 VIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFN 620
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+PN T+ +I GF K G E A M+ +C PN ++ +++G
Sbjct: 621 LEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLING 669
Score = 68.6 bits (166), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 46 LDAAVAFFHQMLAA-NPFPCVKDFNSLFTFVARTKHYAAAISLIKRA------HSSGVAP 98
+D AV F+ + N FPCV NSL + + A L + H +
Sbjct: 144 VDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVV 203
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
D Y++ IV+ LC + + G ++ + G P N I++G C + ++ A
Sbjct: 204 DNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVF 263
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ G+ P T+GA+I+GFCK G + + M N V+N+I+D
Sbjct: 264 EELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDA 319
Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 70/169 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A M P + +N L F A ++RA + P+ ++
Sbjct: 326 VDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTP 385
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C +L + +TG +P + ++G + A+ M G
Sbjct: 386 LMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKG 445
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P++ + +++G CK G +A L + M++ + +P+A +Y ++DG
Sbjct: 446 VFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDG 494
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD+A+ F QM+ P V + SL + + A + + S + P++ T I
Sbjct: 571 LDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTI 630
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC------------LENNVAS 153
+I + S L+ P T + ++NGL EN+ +
Sbjct: 631 LIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSL 690
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ F M + G+ T+ +II CK G ++A L M+ + ++V ++A++
Sbjct: 691 ILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLH 750
Query: 214 G 214
G
Sbjct: 751 G 751
Score = 48.5 bits (114), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ + ++ GV PD N++++ LC R +L + L+P T+V+
Sbjct: 434 ALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVD 493
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G N + A + + G P + +I G CK G AV + M + P
Sbjct: 494 GFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAP 553
Query: 204 NAVVYNAIMDG 214
+ ++ ++DG
Sbjct: 554 DEYTHSTVIDG 564
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +F +++ P + +F + + + A +++ G P++YT +I+
Sbjct: 217 ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLID 276
Query: 109 CLCHLRRT--AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
LC T AF L L LV +P T +++G C E+ + A M+ G
Sbjct: 277 GLCKKGWTEKAFRL-FLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 335
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ T+ +I+G CK G+ E A M M PN YNAI++G
Sbjct: 336 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNG 383
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + + + A+ L + SG+ PDI++ +I C R
Sbjct: 412 YNILMSEHCKQANIRQALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAV 471
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G+ PT T +++ G C E N+ A+ F + + G P+S T+GAII+G CK +
Sbjct: 472 RIGIIPTNRTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKLD 531
Query: 188 SAVLCMRNMVERHCEPNAV 206
A +M+E+ P V
Sbjct: 532 EARGLYDSMIEKGLVPCEV 550
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISL-IKRAHSSGVAPDIYTL 103
++ A +M+ P V SL + + A L +K S P++ T
Sbjct: 248 SIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTY 307
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+ C + +L + + GL P T T T+++G C N A M +
Sbjct: 308 TAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSS 367
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+ PN T+ AI+NG CK G + A + + + +P+ YN +M
Sbjct: 368 EGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILM 416
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V +N++ + + A +++ +G+ PD +T NI+++ C L +
Sbjct: 372 PNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVL 431
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K+G++P + T++ C EN + + F G P + T+ ++I G+C+
Sbjct: 432 FNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRTYTSMICGYCR 491
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ A+ + + C P+++ Y AI+ G
Sbjct: 492 EGNLTLAMKFFHRLSDHGCAPDSITYGAIISG 523
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 65/161 (40%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
F + + N P V + ++ + R A L+ R G+ P+ T +I+ C
Sbjct: 291 FLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHC 350
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
++ L+ G P T N IVNGLC V A G +P+ +
Sbjct: 351 KAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRF 410
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
T+ +++ CK + A++ MV+ +P+ Y ++
Sbjct: 411 TYNILMSEHCKQANIRQALVLFNKMVKSGIQPDIHSYTTLI 451
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 66/169 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L AV +M P + N + + A L + GV PD + +
Sbjct: 109 LKEAVEMVIEMHNQGLVPNTRTLNLIIKVTSEMGLVEYAELLFEEMCVRGVQPDSVSYRV 168
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ C + L + + G AT I++ C + A+ + R + + G
Sbjct: 169 MVVMYCKIGNILEADRWLSAMLERGFVVDNATFTLIISRFCEKGYATRALWYFRRLVDMG 228
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+PN F +I G CK G + A + MV + +PN + +++DG
Sbjct: 229 LEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 277
>Medtr2g030540.1 | PPR containing plant-like protein | HC |
chr2:11523849-11519339 | 20130731
Length = 639
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++FT + R K + L ++ G PDI+T NI+I+ R + + +
Sbjct: 433 YNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELE 492
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ +P + N+++N L +V A + M+ G P+ T+ +I F K E
Sbjct: 493 NSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVE 552
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A M+ C PN V YN ++D
Sbjct: 553 MACSLFDEMIAEGCSPNLVTYNILLD 578
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 15/178 (8%)
Query: 40 IRSLKTLDAAVAFFH--QMLAANPFPCVKDFNSLFTFVARTK---HYAAAISLIKRAHSS 94
++SLK A FFH L +PF +N LF ++R+ + SL+
Sbjct: 98 LKSLKNPTLAFKFFHFCPSLKNDPFI----YNRLFLTLSRSSSQLRFEQTESLLDDMEKR 153
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV I T+NI+I L R +GLV K GLR + ++ G + A
Sbjct: 154 GVKGSISTVNILIGFFGDLDR------CVGLVKKWGLRFNAYSYKCLLQGYLRLRDCDKA 207
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M GY + + F +++ K + A +M RHCEP+ Y ++
Sbjct: 208 FGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMI 265
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 82 AAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTI 141
A AI L+ R H + D N V L L++ + + + + G P T N +
Sbjct: 412 AEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNIL 471
Query: 142 VNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
++ V SAV +EN+ QP+ ++ ++IN K GD + A + + M E+
Sbjct: 472 ISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGL 531
Query: 202 EPNAVVYNAIMD 213
P+ V Y+ +++
Sbjct: 532 NPDVVTYSTLIE 543
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S +D+AV F ++ +N P V +NSL + + A K G
Sbjct: 471 LISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKG 530
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T + +I C + S+ + G P T N +++ L A AV
Sbjct: 531 LNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAV 590
Query: 156 TFTRHMENAGYQPNSYTFGAI 176
++ G P+S T+ +
Sbjct: 591 DLYAKLKQQGLTPDSITYAVL 611
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 67/166 (40%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
LK + + +M P P + +N L + R +A+ + + +S PD+ +
Sbjct: 443 LKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVIS 502
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +INCL + + GL P T +T++ + V A + M
Sbjct: 503 YNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMI 562
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
G PN T+ +++ + G T AV + ++ P+++ Y
Sbjct: 563 AEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 608
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 72.0 bits (175), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+ A F QM+AAN P FN++ + +T + + G T N +
Sbjct: 516 ERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSI 575
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ L + ++G+ P T ++++GLC N + A+ M+ G
Sbjct: 576 IDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGM 635
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + + A+I+GFCK+ D ESA +++ PN VVYN+++ G
Sbjct: 636 KLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + ++ A + +M P V NSL A L A G
Sbjct: 366 LINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG 425
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ ++ T NI++ L L + ++ + G+ P+ + N ++ G C + + A
Sbjct: 426 IT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAY 484
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + + G +PN+ T+ +I+GF K GD+E A + M+ + P +N +++G
Sbjct: 485 SMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVING 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAF--GLSV 122
V +N L ++ A +L ++ S G+ P + + N +I L H ++ S+
Sbjct: 429 VVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLI--LGHCKKGCMDKAYSM 486
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + GL+P T +++G + + A M A P +TF +ING K
Sbjct: 487 LKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGK 546
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + N +++ ++ YN+I+DG
Sbjct: 547 TGRVSETQDKLNNFIKQGFVSTSITYNSIIDG 578
Score = 51.6 bits (122), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 71/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D+A+ + +M + P V + SL + ++ A+ + G+ D+ +
Sbjct: 585 VDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSA 644
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C + + GL P T N++++G NN+ +A+ + M
Sbjct: 645 LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNK 704
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +II G K G A+ M+ + P+ V+Y +++G
Sbjct: 705 VPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLING 753
Score = 48.5 bits (114), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 8/184 (4%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+LL S + + AV F ML + P V N+L T + R A L
Sbjct: 155 YLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVER 214
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT----GLRPTTATLNTIVNGLCLENN 150
G+ D YTL++V+ ++ F + FK GL A + +V +C +
Sbjct: 215 GIYGDCYTLHVVMRAC--MKEGKF--EEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLD 270
Query: 151 VASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
+ A + M G+ P+ T+ A+I K G+ A+ MV N +V +
Sbjct: 271 LNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRS 330
Query: 211 IMDG 214
+M G
Sbjct: 331 LMKG 334
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
A F M P + +N+L T R Y +++ + S+G PD T N +++
Sbjct: 298 AIFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVF 357
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
RR L VL + G PT T N++++ + A M G +P+
Sbjct: 358 AKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDV 417
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+T+ +++GF K G E A M C+PN +NA++
Sbjct: 418 FTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALI 459
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHSS 94
L+ + S + AV+ F++M P + +NS+ + ++ ++ ++
Sbjct: 247 LITAYASKGRYNDAVSVFNKMQRDGCTPTLVTYNSILNVYGKMGMSWSRVTAIFDSMKTN 306
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV PD+YT N +I C ++V + G P T N +++ A
Sbjct: 307 GVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEA 366
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + ME+ G+ P T+ ++I+ + G E A MVE+ +P+ Y ++ G
Sbjct: 367 LQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSG 426
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +NSL +R+ + + +++ G+ PD + N VI C R L +
Sbjct: 695 PSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRM 754
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + L P T NT V ++ A+ R+M G +P+ T+ +II+ +CK
Sbjct: 755 FSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIIDWYCK 814
Query: 183 IGDTESAVLCMRNM 196
+ A ++N+
Sbjct: 815 HNRQDEANSFVKNL 828
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L S +S ++ AFF ++ P + N++ + R + + A ++ + +G
Sbjct: 634 VLVSSKSDLLMETERAFF-ELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENG 692
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P + T N ++ + +L V K G++P + NT++ C + A+
Sbjct: 693 FTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEAL 752
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+++ PN T+ + + A+ +R M+++ C P+ YN+I+D
Sbjct: 753 RMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIID 810
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 74/177 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ + A + +M AA P + FN+L + + + + G
Sbjct: 423 LLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECG 482
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PDI T N ++ H + + V + ++G P T NT+++ + A+
Sbjct: 483 CSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAM 542
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M +G P+ T+ A++ + G E + + M + C PN + Y++++
Sbjct: 543 AVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLL 599
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
A F M P + +N+L T R Y +++ + S+G PD T N +++
Sbjct: 298 AIFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVF 357
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
RR L VL + G PT T N++++ + A M G +P+
Sbjct: 358 AKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDV 417
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+T+ +++GF K G E A M C+PN +NA++
Sbjct: 418 FTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALI 459
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHSS 94
L+ + S + AV+ F++M P + +NS+ + ++ ++ ++
Sbjct: 247 LITAYASKGRYNDAVSVFNKMQRDGCTPTLVTYNSILNVYGKMGMSWSRVTAIFDSMKTN 306
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
GV PD+YT N +I C ++V + G P T N +++ A
Sbjct: 307 GVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEA 366
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + ME+ G+ P T+ ++I+ + G E A MVE+ +P+ Y ++ G
Sbjct: 367 LQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSG 426
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +NSL +R+ + + +++ G+ PD + N VI C R L +
Sbjct: 695 PSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRM 754
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + L P T NT V ++ A+ R+M G +P+ T+ +II+ +CK
Sbjct: 755 FSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIIDWYCK 814
Query: 183 IGDTESAVLCMRNM 196
+ A ++N+
Sbjct: 815 HNRQDEANSFVKNL 828
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L S +S ++ AFF ++ P + N++ + R + + A ++ + +G
Sbjct: 634 VLVSSKSDLLMETERAFF-ELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENG 692
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P + T N ++ + +L V K G++P + NT++ C + A+
Sbjct: 693 FTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEAL 752
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+++ PN T+ + + A+ +R M+++ C P+ YN+I+D
Sbjct: 753 RMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIID 810
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 74/177 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ + A + +M AA P + FN+L + + + + G
Sbjct: 423 LLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECG 482
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PDI T N ++ H + + V + ++G P T NT+++ + A+
Sbjct: 483 CSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAM 542
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M +G P+ T+ A++ + G E + + M + C PN + Y++++
Sbjct: 543 AVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLL 599
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 72.0 bits (175), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 73/146 (50%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + A+ L + + G+ P + T N ++ LC R +L +
Sbjct: 306 YTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMS 365
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ ++ + T NT++N C ++ SA+ F M AG PNS+T+ A+I+GFCK + E
Sbjct: 366 ERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELE 425
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
SA + M++ PN Y+ I+D
Sbjct: 426 SAKELLFGMLDAGFSPNYRTYSWIVD 451
Score = 60.8 bits (146), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 52/117 (44%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
P+ T +I+ C L + ++ GL P T N+I+ LC + + A
Sbjct: 301 PNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKL 360
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M Q +S T +IN +CKIGD SA+ M+E PN+ Y A++ G
Sbjct: 361 LHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHG 417
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 71/167 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A+ M+A +P V +NS+ + A L+ V D T N
Sbjct: 319 FEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNT 378
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN C + L + + GL P + T +++G C + + SA M +AG
Sbjct: 379 LINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAG 438
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ PN T+ I++ +CK +T++ + + + N +Y A++
Sbjct: 439 FSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALI 485
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 4/167 (2%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F QM N P + L + + + + KR GV P+IY N +I+
Sbjct: 149 AVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIH 208
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
R +L + G+ P T NT++ C + A++ ME G
Sbjct: 209 ACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINL 268
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVE-RHCEPNAVVYNAIMDG 214
+ ++ ++I GFCK G A MR E + PN V Y ++DG
Sbjct: 269 DIVSYNSLIYGFCKEGKMREA---MRMFGEIKDAIPNHVTYTTLIDG 312
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ L + GV P++ T N +I+ LC R L G + + + P+ T +VN
Sbjct: 264 AVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVN 323
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
GL A + M + G+ PN + F A+I+G+ + G+ + A+ +M + +P
Sbjct: 324 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP 383
Query: 204 NAVVYNAIMDG 214
NAV +N ++ G
Sbjct: 384 NAVTHNTLLQG 394
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
FP +K N L + + ++ + + GV D+YT IN C + +
Sbjct: 207 FPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVG 266
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
+ + + G+ P T N +++GLC + A+ F M P+ T+G ++NG
Sbjct: 267 LFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLV 326
Query: 182 KIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
K + A + M + PN V+NA++DG
Sbjct: 327 KFEKFDEANSVLVEMYSKGFSPNEFVFNALIDG 359
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 35/204 (17%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A +M+ P +N L +A ++ A GV P+IYT +
Sbjct: 542 IEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYAL 601
Query: 106 VINCLCHLRRTAFGLSVLG-LVF------------------KTG---------------- 130
++ C+ R +S+ LV+ K G
Sbjct: 602 MLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSN 661
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
+ PT T ++I++G+C + V A M N G PN + + A+I G+CK+G +
Sbjct: 662 IHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIE 721
Query: 191 LCMRNMVERHCEPNAVVYNAIMDG 214
++ M +PN + Y ++DG
Sbjct: 722 SILQEMTSNCIQPNKITYTIMIDG 745
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV F +M P V +N+L + ++ A+ R + V P + T I
Sbjct: 261 IDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGI 320
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N L + SVL ++ G P N +++G + N+ A+ M G
Sbjct: 321 LVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKG 380
Query: 166 YQPNSYTFGAIINGFCKIGDTESA 189
+PN+ T ++ GFC+ E A
Sbjct: 381 LKPNAVTHNTLLQGFCRTNQMEQA 404
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D AV+ F++++ +N L ++ ++ A L SS + P I+T +
Sbjct: 612 IDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSS 671
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ +C + + GL P ++ G C + + + M +
Sbjct: 672 IIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 731
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
QPN T+ +I+G+CK+G+T+ A + M+ P+ V Y + G
Sbjct: 732 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKG 780
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
S GV P + + N +++ L V + + G+ T T +N C +
Sbjct: 203 SKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKID 262
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
AV M G PN T+ +I+G CK G E A++ MVE P+ V Y ++
Sbjct: 263 EAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILV 322
Query: 213 DG 214
+G
Sbjct: 323 NG 324
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 74 FVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF----KT 129
+ ++ + +A+ ++K + + L +++ LC + L + L F K
Sbjct: 429 LLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLC---KCGKHLEAIDLWFRLADKK 485
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
GL T T N ++ GLC N+ + M G + ++ +I G CK G E A
Sbjct: 486 GLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA 545
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M+++ +P+ YN +M G
Sbjct: 546 FKLKEKMMKQGFKPDTYTYNFLMKG 570
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 52/124 (41%)
Query: 89 KRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
K G+ D + N +I C + + + K G +P T T N ++ GL +
Sbjct: 515 KEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADK 574
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ ++ G PN YT+ ++ G+C ++AV +V E + VVY
Sbjct: 575 GKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVY 634
Query: 209 NAIM 212
N ++
Sbjct: 635 NILI 638
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +F +++ P + +F + + + A +++ G P++YT +I+
Sbjct: 199 ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLID 258
Query: 109 CLCHLRRT--AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
LC T AF L L LV +P T +++G C E+ + A M+ G
Sbjct: 259 GLCKKGWTEKAFRL-FLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 317
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ T+ +I+G CK G+ E A M M PN YNAI++G
Sbjct: 318 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNG 365
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + + ++ A++L + G+ PDI++ +I C R
Sbjct: 394 YNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAV 453
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G+ PT T +++ G C E N+ A+ F + + G P+S T+GAII+G CK +
Sbjct: 454 RIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRD 513
Query: 188 SAVLCMRNMVERHCEPNAV 206
A +M+E+ P V
Sbjct: 514 EARSLYDSMIEKGLVPCEV 532
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISL-IKRAHSSGVAPDIYTL 103
++ A +M+ P V SL + + A L +K S P++ T
Sbjct: 230 SIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTY 289
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+I+ C + +L + + GL P T T T+++G C N A M +
Sbjct: 290 TAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSS 349
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+ PN T+ AI+NG CK G + A + + + +P+ YN +M
Sbjct: 350 EGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILM 398
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 72/152 (47%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N++ + + A +++ +G+ PD +T NI+++ C L++
Sbjct: 354 PNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALAL 413
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K G++P + T++ C EN + + F G P + T+ ++I G+C+
Sbjct: 414 FNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCR 473
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ A+ + + C P+++ Y AI+ G
Sbjct: 474 EGNLTLAMKFFHRLSDHGCAPDSITYGAIISG 505
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 70/179 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++ S + L AV +M P + N + + A L + G
Sbjct: 81 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 140
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD + +++ C + L ++ + G AT I++ + A+
Sbjct: 141 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 200
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ R + + G +PN F +I G CK G + A + MV + +PN + +++DG
Sbjct: 201 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 259
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
F + + N P V + ++ + R A L+ R G+ P+ T +I+ C
Sbjct: 273 FLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHC 332
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
++ L+ G P T N IVNGLC V A G +P+ +
Sbjct: 333 KAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKF 392
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
T+ +++ CK + A+ M++ +P+ Y ++
Sbjct: 393 TYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 433
>Medtr7g072070.1 | PPR containing plant-like protein | HC |
chr7:26781971-26778389 | 20130731
Length = 492
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V D ++ F+ + A+ ++ + G+ PDI IV++ + +
Sbjct: 253 PGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVKLDEL 312
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ GL P T N +NGLC +NN A+ ME G +PN T+ ++ C
Sbjct: 313 FDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCM 372
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GD A M+ M + E N Y ++DG
Sbjct: 373 SGDLGKAKRVMKEMRLKGVELNLHTYRIMLDG 404
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD 99
++ K +DA + +Q+ P + + + + + + Y L G+ PD
Sbjct: 266 VKEGKGMDA-LEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVKLDELFDEILVLGLVPD 324
Query: 100 IYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR 159
+YT N+ IN LC L ++ + K G +P T NT++ LC+ ++ A +
Sbjct: 325 VYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMK 384
Query: 160 HMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M G + N +T+ +++G G+ A + + M+E+ P + +++I+
Sbjct: 385 EMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDSIV 437
>Medtr2g072170.1 | PPR containing plant-like protein | HC |
chr2:30300092-30302292 | 20130731
Length = 540
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 1/172 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ +D A+ ++M +P +K FN + + +K Y L A GV D L
Sbjct: 132 QRIDKAIQLLNEMPNYGTWPSIKTFNFVLNVLVNSKLYDVVFDLYASALKLGVEIDACCL 191
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+I LC V K GL+ T TI+NGLC + V M+
Sbjct: 192 NIMIKGLCKKGEMESAFKVFDEFPKMGLKRNERTFATIMNGLCEKGMVDEGFGLLERMKE 251
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERH-CEPNAVVYNAIMDG 214
G + + +I+G K G + V + +++ R+ C PN Y ++ G
Sbjct: 252 EGIVVDVVVYNVLIHGLVKNGRVDEGVTVLEDVMMRNGCYPNESSYQHVLYG 303
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Query: 60 NPFPCVKDF--NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTA 117
P+ +DF N + + + + AI L+ + G P I T N V+N L + +
Sbjct: 111 KPYSFTQDFFFNLIKIYAHKAQRIDKAIQLLNEMPNYGTWPSIKTFNFVLNVLVNSKLYD 170
Query: 118 FGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAII 177
+ K G+ LN ++ GLC + + SA G + N TF I+
Sbjct: 171 VVFDLYASALKLGVEIDACCLNIMIKGLCKKGEMESAFKVFDEFPKMGLKRNERTFATIM 230
Query: 178 NGFCKIGDTESAVLCMRNMVER 199
NG C+ G + + M E
Sbjct: 231 NGLCEKGMVDEGFGLLERMKEE 252
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L+ ++K ++ A+ ++L + P V +N++ + + A ++ R
Sbjct: 117 KLIKGFFNMKKIEKAIQVM-EILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKR 175
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G PD+ T NI+I C R L V+ + K +PT T ++ + + A
Sbjct: 176 GFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEA 235
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M + G +P+ YT+ ++NG CK G + A + + + C YN ++
Sbjct: 236 MKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILL 293
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 79/202 (39%), Gaps = 35/202 (17%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A+ Q+L N P V + L A+ L+ S G+ PD YT N+
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 106 VINCLCH-----------------------------LR------RTAFGLSVLGLVFKTG 130
V+N +C LR + +G ++ + G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
P T +T++ LC + + A + M+ P+ Y++ +I+ C+ G + A+
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376
Query: 191 LCMRNMVERHCEPNAVVYNAIM 212
+ +M+ P+ + YN+I+
Sbjct: 377 EFLDDMISGGHLPDILSYNSIL 398
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ F M++ P + +NS+ + + + A+++ ++ G P+ + N
Sbjct: 372 VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNT 431
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM-ENA 164
+ L L ++ + G+ P T N++++ LC + V A+ M E+
Sbjct: 432 LFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESE 491
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
QP ++ ++ G CK+ A+ + MV C PN Y ++ G
Sbjct: 492 KCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQG 541
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A F ++ V +N L + + L+ G P+ T +
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + +VL ++ + L P + + +++ LC E V A+ F M + G
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ P+ ++ +I+ CK G+ + A+ + E C PNA YN +
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTL 432
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 77 RTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTA 136
++ Y ++ ++ + G PD+ +I ++++ + V+ ++ K G +P
Sbjct: 89 KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVF 147
Query: 137 TLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
N +++G C + V A M+ G++P+ T+ +I FC G + A+ M +
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207
Query: 197 VERHCEPNAVVYNAIMD 213
++ +C+P + Y +++
Sbjct: 208 LKDNCKPTVITYTILIE 224
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
++ L + + R AI + S G PDI + N ++ LC L++ +
Sbjct: 359 YDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLG 418
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G P + NT+ L + A+ M + G P+ T+ ++I+ C+ G +
Sbjct: 419 EVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVD 478
Query: 188 SAVLCMRNMVE-RHCEPNAVVYNAIMDG 214
A+ + +M E C+P + YN ++ G
Sbjct: 479 QAIELLVDMFESEKCQPTVISYNTVLLG 506
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 72/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL + + + ML P +++L T + R A +++K
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+APD Y+ + +I+ LC + + L + G P + N+I+ LC N A+
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEAL 411
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G PN+ ++ + GD A+ + M+ +P+ + YN+++
Sbjct: 412 NIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLI 468
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 70.9 bits (172), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 58/130 (44%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A + + G +P++YT + I+CL R L VL + + P +V+
Sbjct: 670 AQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVD 729
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
GLC A ME G PN T+ A+I+GF K G E + R+M + C P
Sbjct: 730 GLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAP 789
Query: 204 NAVVYNAIMD 213
N + Y +++
Sbjct: 790 NFITYRVLIN 799
Score = 65.1 bits (157), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 35/161 (21%)
Query: 89 KRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLE 148
K H++ P++ T +++ LC R +L + G P + +++G C
Sbjct: 605 KLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKI 664
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAII------------------------------- 177
+ A M GY PN YT+ + I
Sbjct: 665 GKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIY 724
Query: 178 ----NGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+G CKIG T+ A M M E+ C PN V Y A++DG
Sbjct: 725 TEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG 765
Score = 60.8 bits (146), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 71/198 (35%), Gaps = 41/198 (20%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN------- 108
M+ +P + FNSL +++ Y+ A L K+ G P NI I
Sbjct: 340 MITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEE 399
Query: 109 ----------------------------------CLCHLRRTAFGLSVLGLVFKTGLRPT 134
CLC + ++ + G P
Sbjct: 400 QPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPD 459
Query: 135 TATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
+T + ++ LC + V A + M+ G P+ YT+ +I+ FCK G + A
Sbjct: 460 DSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFD 519
Query: 195 NMVERHCEPNAVVYNAIM 212
M+ + C PN V Y A++
Sbjct: 520 EMLHKGCTPNVVTYTALI 537
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 16/185 (8%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D A +M+ P ++ + F+ A SL + +G+ P +YT I
Sbjct: 441 FDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ C + G P T +++ + A M G
Sbjct: 501 LIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEG 560
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLC---MRNMVE------------RHCE-PNAVVYN 209
+PN T+ A+I+G CK G E A MR +E +CE PN + Y
Sbjct: 561 CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYG 620
Query: 210 AIMDG 214
A++DG
Sbjct: 621 ALVDG 625
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 70.9 bits (172), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 80/178 (44%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S L A+ F+QM P + +L A+ + A+S+ +R G
Sbjct: 448 LIHSYGRANYLKEALNVFNQMQEKRCEPDRVTYCTLIDIHAKAGYLDVAMSMYERMQQVG 507
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD +T +++INCL A + G + G P T N ++ N +A+
Sbjct: 508 LSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIVTYNIMIALQAKARNYEAAL 567
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
R M+NAG++P+ T+ ++ G E A M +R+ P+ VY ++D
Sbjct: 568 KLYRDMQNAGFRPDKVTYSIVMEVLGHCGYLEEAEAVFVEMKQRNWVPDEPVYGLLVD 625
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 75/177 (42%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N + L AA F +M+ P + +N + A+ ++Y AA+ L + ++G
Sbjct: 518 MINCLGKSGNLAAADRLFGEMVDQGCVPNIVTYNIMIALQAKARNYEAALKLYRDMQNAG 577
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD T +IV+ L H +V + + P +V+ NV A
Sbjct: 578 FRPDKVTYSIVMEVLGHCGYLEEAEAVFVEMKQRNWVPDEPVYGLLVDLWGKAGNVEKAW 637
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M +AG PN T ++++ F ++ A +++MV P+ Y ++
Sbjct: 638 EWYGAMLSAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQSMVALGLSPSLQTYTLLL 694
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 67/162 (41%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
QM+ P V +N L R + A+++ + PD T +I+
Sbjct: 429 LLEQMVKDGCQPNVVTYNRLIHSYGRANYLKEALNVFNQMQEKRCEPDRVTYCTLIDIHA 488
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
+S+ + + GL P T T + ++N L N+A+A M + G PN
Sbjct: 489 KAGYLDVAMSMYERMQQVGLSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIV 548
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
T+ +I K + E+A+ R+M P+ V Y+ +M+
Sbjct: 549 TYNIMIALQAKARNYEAALKLYRDMQNAGFRPDKVTYSIVME 590
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 70.9 bits (172), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ + +H M +N+L R A L+ G D T N
Sbjct: 474 MEETLGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNG 533
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC GL ++ +F G+ P+ + N + N C V A+ F R M + G
Sbjct: 534 LIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRG 593
Query: 166 YQPNSYTFGAIINGFCKIGDTESAV-LCMRNMVERHCEPNAVVYNAIM 212
P+ T+ ++ING CK G + A+ L R E C PNAV YN ++
Sbjct: 594 LTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMC-PNAVTYNTLI 640
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Query: 56 MLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+L+ P P +N+L +VA + A L + +G PD + NI+I+ LC
Sbjct: 268 LLSKIPNPNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKG 327
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
L L + + G P T ++NG C + + A M + G +P+ YTF
Sbjct: 328 YLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFN 387
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++I G CK E A+ +M N + YN ++
Sbjct: 388 SLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLI 425
Score = 67.8 bits (164), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 65/146 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + +T + LI+ G+ P I + NI+ N C + + L L +
Sbjct: 531 YNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMI 590
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
GL P T N+++NGLC + A+ ++ G PN+ T+ +I+ FC
Sbjct: 591 HRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYEDLFN 650
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A L + V PN + ++ +++
Sbjct: 651 DACLLLFKGVSNGFIPNEITWSILIN 676
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G P N +++GLC + + SA+ F M G++PN T+ +INGFCK G + A
Sbjct: 308 GFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDA 367
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M + C+P+ +N+++ G
Sbjct: 368 FQMYGEMSSKGCKPDIYTFNSLIYG 392
Score = 57.8 bits (138), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 60/147 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ ++ + +M FP + N L A+ ++ G
Sbjct: 534 LIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRG 593
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI T N +IN LC R L++ + G+ P T NT+++ C E+ A
Sbjct: 594 LTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYEDLFNDAC 653
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G+ PN T+ +IN F K
Sbjct: 654 LLLFKGVSNGFIPNEITWSILINCFVK 680
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN + + + A L+ R G D ++ LC + + +L +
Sbjct: 214 FNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEARVLLSKI- 272
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFT-RHMENAGYQPNSYTFGAIINGFCKIGDT 186
P T NT++NG A ++M AG++P+++ F +I+G CK G
Sbjct: 273 ---PNPNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYL 329
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
SA+ + MVE+ EPN + Y +++G
Sbjct: 330 VSALEFLNEMVEKGFEPNVITYTILING 357
Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 69/166 (41%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+A + M+ A P FN + + + + +A+ + G P++ T I+
Sbjct: 295 EAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTIL 354
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
IN C + + G + G +P T N+++ GLC + + A+ M G
Sbjct: 355 INGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGV 414
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N+ T+ +I+ F + + A + M+ R + + YN ++
Sbjct: 415 IANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLI 460
Score = 53.9 bits (128), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F ++M+ P V + L + A + S G PDIYT N
Sbjct: 329 LVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNS 388
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + L + +F G+ T T NT+++ +++ A M G
Sbjct: 389 LIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRG 448
Query: 166 YQPNSYTFGAIINGFCKIG-----DTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ ++ T+ +I CK G E + +M N + YN ++
Sbjct: 449 FPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLEGVIANTITYNTLI 500
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K +N + + A ++ S G++P ++T IV+ C
Sbjct: 163 PTFKSYNVVLEILVSGNCPKVAPNVFYDMLSRGISPTVHTFGIVMKAFC----------- 211
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
T N +++GLC + A M G+ ++ +G ++ G C+
Sbjct: 212 -------------MTFNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCR 258
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+G + A R ++ + PN V+YN +++G
Sbjct: 259 MGQVDEA----RVLLSKIPNPNTVLYNTLING 286
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 75/209 (35%), Gaps = 40/209 (19%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ +H M +N+L R A L+ G D T N
Sbjct: 399 MEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNG 458
Query: 106 VINCLCH--LRRTAFGLSVLGL---VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
+I LC L + LGL +F G+ T T NT+++ +++ A
Sbjct: 459 LIKALCKTGLCKNDKMEETLGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNE 518
Query: 161 MENAGYQPNSYTFGAII-----------------------------------NGFCKIGD 185
M G+ ++ T+ +I N FC IG
Sbjct: 519 MLFRGFPLDNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGK 578
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ +R+M+ R P+ V YN++++G
Sbjct: 579 VNDALRFLRDMIHRGLTPDIVTYNSLING 607
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A + +M+ P +N + + + +A A L G A ++ + +
Sbjct: 322 LAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYST 381
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ L +T LS+ + + G+ + N+++ GLC E +A A + G
Sbjct: 382 MISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQG 441
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ +F +I CK+GDTE A+ +++M +RH EP A ++ ++ G
Sbjct: 442 LEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIG 490
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN+L + K Y ++ + P IYT +IN L R+ V +
Sbjct: 239 FNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLK 298
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G P T++ G C +A A M G PN YT+ +I G+CK+ D
Sbjct: 299 DRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFA 358
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A +M R N V Y+ ++ G
Sbjct: 359 EARKLYDDMCGRGYAENVVSYSTMISG 385
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 66/179 (36%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N K D H M+A P + + + + + + A + G
Sbjct: 242 LINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRG 301
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD VI C + A + + + GL P T N ++ G C + A A
Sbjct: 302 YFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEAR 361
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M GY N ++ +I+G G T+ A+ M + + + YN+++ G
Sbjct: 362 KLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKG 420
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%)
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL 145
L+++ G+ D N +IN C ++ +L ++ P+ T I+NGL
Sbjct: 222 ELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGL 281
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
A +++ GY P+ + +I GFC +G A M+++ PN
Sbjct: 282 LKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNE 341
Query: 206 VVYNAIMDG 214
YN ++ G
Sbjct: 342 YTYNVMIYG 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
A+SL G+A D+ + N +I LC A ++L + GL P+ ++ ++
Sbjct: 394 EALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLI 453
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
LC + A+ + M + +P + T +I G K GD + + M+ +
Sbjct: 454 KCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLK 513
Query: 203 PNAVVYNAIMD 213
PN + ++D
Sbjct: 514 PNMQTFEHLID 524
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A++ FH+M + +NSL + + A A +L+ + G+ P + + +
Sbjct: 393 DEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPL 452
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I CLC + T + +L + L P +T + ++ GL + + A + + M +
Sbjct: 453 IKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKL 512
Query: 167 QPNSYTFGAIIN 178
+PN TF +I+
Sbjct: 513 KPNMQTFEHLID 524
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGL--RPTTATLNTIVNGLCLENNVA 152
G P + N+ + + RT + L+ ++G+ T+ ++ C EN V
Sbjct: 159 GFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVF 218
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ R + G ++ F A+INGFCK + + M+ C P+ Y I+
Sbjct: 219 NGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEII 278
Query: 213 DG 214
+G
Sbjct: 279 NG 280
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 98 PDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
P+I T N +I+ LC + + + + P TLN +VNG+C V SAV F
Sbjct: 235 PNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVEF 294
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M+ G + N+ T+ A+I+GFC + + AV M+ C P+ +VY +++
Sbjct: 295 FNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYYSLI 349
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 1/172 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+ R K L+ ++M P +N+L +++ + A A ++K G
Sbjct: 378 LLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEG 437
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGL-RPTTATLNTIVNGLCLENNVASA 154
P ++ +I+ C + + + + T + RP +++ LC NNV A
Sbjct: 438 FEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKA 497
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
V+ M+ +PN+ + I+ G A M MVE C P+ V
Sbjct: 498 VSLMGDMKLKSVRPNTTIYNVILKGLWDKRMLHKAFELMDRMVEDACSPDHV 549
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT-----GLR-------- 132
L+ + P++ T +I+I+ LC RRT L V + T G R
Sbjct: 168 KLLAEMDEMEIRPNVLTFDILIDHLCKARRTDEALGVFDKLRGTLQSWEGRRLLSLLEEM 227
Query: 133 -------PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
P T N +++ LC NV M +P+ T A++NG CKIG
Sbjct: 228 KVEKKNWPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGR 287
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+SAV M + E NAV Y A++ G
Sbjct: 288 VDSAVEFFNEMKGKGLEGNAVTYTALISG 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L + + K ++ + V PD T N +++ L +A ++ +
Sbjct: 375 YYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMI 434
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM-ENAGYQPNSYTFGAIINGFCKIGDT 186
+ G P+ I++ CL+ NV A+ M + +PN + +I+ CK +
Sbjct: 435 EEGFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNV 494
Query: 187 ESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E AV M +M + PN +YN I+ G
Sbjct: 495 EKAVSLMGDMKLKSVRPNTTIYNVILKG 522
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 31/193 (16%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAA------ISLIKRAHSSGVAPDI 100
D ++ F++ L P +K S + +AR+ + L+ + GV PD+
Sbjct: 58 DESLILFNRFL-----PSLKSTESYNSVLARSSSSKRGFTDDDIVGLVTKLGEHGVFPDM 112
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
+ L I+ LC+ R+ +L V K G + N ++ GL +N++ S
Sbjct: 113 FQLMDFISVLCYKRKNCVAWELLRAVKKLGGTVEATSCNVLLRGLGSQNDIRSMYKLLAE 172
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAV--------------------LCMRNMVERH 200
M+ +PN TF +I+ CK T+ A+ L VE+
Sbjct: 173 MDEMEIRPNVLTFDILIDHLCKARRTDEALGVFDKLRGTLQSWEGRRLLSLLEEMKVEKK 232
Query: 201 CEPNAVVYNAIMD 213
PN V YN ++D
Sbjct: 233 NWPNIVTYNCLID 245
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 70/181 (38%), Gaps = 30/181 (16%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLS 121
+P + +N L ++ + + L R + V PD+ TLN ++N +C + R +
Sbjct: 234 WPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVE 293
Query: 122 VLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT--------- 172
+ GL T +++G C NN+ AV + M ++G P++
Sbjct: 294 FFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYYSLISSLT 353
Query: 173 ---------------------FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ A+++GF K E + M E +P+ V YN +
Sbjct: 354 IARRMDLSQLKQVGLGLDRTCYYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTL 413
Query: 212 M 212
+
Sbjct: 414 V 414
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 39/213 (18%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + +D+AV FF++M + +L + + A+ SSG
Sbjct: 278 LVNGMCKIGRVDSAVEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSG 337
Query: 96 VAPDIYTLNIVINCL--------CHLRRTAFGL----------------------SVLGL 125
+PD +I+ L L++ GL +L
Sbjct: 338 CSPDTIVYYSLISSLTIARRMDLSQLKQVGLGLDRTCYYALLSGFRKKKKLEQVSEMLNK 397
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ + ++P T T NT+V+ L + A+A + M G++P+ + +GAII+ +C +
Sbjct: 398 MEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEGFEPSVFAYGAIIHAYCLKKN 457
Query: 186 TESAV-----LCMRNMVERHCEPNAVVYNAIMD 213
A+ +C +MV PN V+Y ++D
Sbjct: 458 VGEAMKIFEEMCSTSMV----RPNIVIYTILID 486
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A +++M+A+ P V + +L A+ L K+ S + P++YT N +++
Sbjct: 10 AFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVD 69
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + +VL + + L+ ++++NG CL N V A + + M
Sbjct: 70 AFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSY 129
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ +IN FCK+ + A+ M + P+ V Y+ ++DG
Sbjct: 130 DVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDG 175
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 145 LCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPN 204
+C + V A M +G PN T+ A+I+GFC +G E A+ + M+ + PN
Sbjct: 1 MCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPN 60
Query: 205 AVVYNAIMDG 214
+N ++D
Sbjct: 61 VYTFNGLVDA 70
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Query: 46 LDAAVAFFHQMLAAN-PFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG-VAPDIYTL 103
+D+A +M + +P V +++L + R A L + S + PD T
Sbjct: 253 IDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTY 312
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N++IN C + +V+ + G P + +V+GLC + A M++
Sbjct: 313 NVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKS 372
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+G +P++ T+ ++IN F + G + A+ + M E C+ + V +N I+ G
Sbjct: 373 SGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGG 423
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 46 LDAAVAFFHQMLAAN---PFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
L A F +M++ + P P +N L R A ++I+ ++G P+++
Sbjct: 289 LKEAFELFEEMVSKDQIVPDPLT--YNVLINGFCREGKADRARNVIEFMKNNGCCPNVFN 346
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+ +++ LC + VL + +GL+P T +++N + A+ M+
Sbjct: 347 YSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMK 406
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
Q ++ TF I+ G C+ G + A+ +M+E+ P VY
Sbjct: 407 ENDCQADTVTFNVILGGLCREGRFDEAL----DMIEKL--PQQGVY 446
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 70.1 bits (170), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A+ F +M A P + +N L A+ LI G PD +
Sbjct: 283 LEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYT 342
Query: 106 VINCLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
V+ LC R+ ++ +V + L P T NT++ L + A+ F R E
Sbjct: 343 VMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEK 402
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+ + + A+++ FCK + + A + +M + C P+ V Y AI+DG
Sbjct: 403 GFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDG 452
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 63/136 (46%)
Query: 77 RTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTA 136
+ K+ A SL+ +S G PD+ T +I+ C + + +L ++K G +P T
Sbjct: 420 KNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTV 479
Query: 137 TLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
T ++NGLC A E + PN+ T+ A+++G + G A R M
Sbjct: 480 TYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREM 539
Query: 197 VERHCEPNAVVYNAIM 212
+E+ PN V N ++
Sbjct: 540 IEKGFLPNPVDINLLI 555
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
Query: 59 ANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAF 118
+N P +N+L +++ H A+ ++ A G D + V++ C +
Sbjct: 367 SNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDK 426
Query: 119 GLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIIN 178
S++ ++ G P T I++G C + A + M G +PN+ T+ ++N
Sbjct: 427 AKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLN 486
Query: 179 GFCKIGDTESAVLCMRNMVERHC-EPNAVVYNAIMDG 214
G C G + A M N+ E H PNA+ Y+A+M G
Sbjct: 487 GLCHNGKSLEARE-MINVSEEHWWTPNAITYSAVMHG 522
Score = 60.8 bits (146), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 81/206 (39%), Gaps = 35/206 (16%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K +D A + M + P V + ++ R A ++++ + G P+ T
Sbjct: 422 KNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTY 481
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
+++N LCH ++ ++ + + P T + +++GL E ++ A TR M
Sbjct: 482 TVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIE 541
Query: 164 AGYQPNS-----------------------------------YTFGAIINGFCKIGDTES 188
G+ PN F ++I GFC+IGD ++
Sbjct: 542 KGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDA 601
Query: 189 AVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ + +M + P+A+ Y + D
Sbjct: 602 ALSMLEDMYLSNKHPDAITYTTLFDA 627
Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 2/178 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ +R L A +M+ P D N L + R ++ A ++ G
Sbjct: 519 VMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKG 578
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
A ++ VI C + LS+L ++ + P T T+ + L ++ + A
Sbjct: 579 CAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEAS 638
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G P T+ A+I+ FC+ G + + + M+ R +P VYN +++
Sbjct: 639 ELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIE 694
Score = 54.7 bits (130), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGV--APDIYTLNIVINCLCHLRRTAFGLSVLGL 125
+ ++ +++T+ A +++ G+ +P+ ++ +V + R A L +L L
Sbjct: 200 YYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNA--LRILTL 257
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ K G+ P + NT + L N + A+ F M+ AG +P+ ++ +I G+C +
Sbjct: 258 MQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHR 317
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIM 212
+ A+ + M + C P+ V Y +M
Sbjct: 318 IDDALELIAEMPFKGCPPDKVSYYTVM 344
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 1/146 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F+ + +R A+ ++ +GV PD+ N I L + L L +
Sbjct: 235 FSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMK 294
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P + N ++ G C + + A+ M G P+ ++ ++ CK E
Sbjct: 295 VAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVE 354
Query: 188 SAVLCMRNMVER-HCEPNAVVYNAIM 212
M NMV+ + P+ V YN ++
Sbjct: 355 EVKRLMENMVQNSNLIPDQVTYNTLI 380
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P ++ +N + R + A L + + V P + T ++ C +RR L +
Sbjct: 252 PSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEM 311
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+G + K G++P N I++ L A+ P T+ +++ GFCK
Sbjct: 312 VGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCK 371
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYN 209
GD E A ++ M+ R P YN
Sbjct: 372 AGDIEGASKILKKMISRGFLPIPTTYN 398
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 71/177 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+LN + L A + +M N P V + +L R + A+ ++ G
Sbjct: 260 MLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEG 319
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ N +I+ L R L ++ + PT +T N++V G C ++ A
Sbjct: 320 IKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGAS 379
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M + G+ P T+ F + G + + M+E P+ + Y+ ++
Sbjct: 380 KILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVL 436
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 99 DIYTLNIVINCLCH-----------LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCL 147
++ I+I+ LC LRR L G P+ N ++NG
Sbjct: 216 EMSLFEILIDSLCKEGSAREASEYLLRRKETDL---------GWVPSIRVYNIMLNGWFR 266
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVV 207
+ A M+N +P+ T+G ++ G+C++ E A+ + M + +PNA+V
Sbjct: 267 ARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIV 326
Query: 208 YNAIMDG 214
YN I+D
Sbjct: 327 YNPIIDA 333
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV-- 122
V+ +N++ AR ++ + G PDI + N +IN T GL++
Sbjct: 264 VQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIEL 323
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L V K GLRP T NT+++ E+N+ A+ HME+ QP+ +T+ A+I+ + +
Sbjct: 324 LDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGR 383
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G A + P+AV YN+++
Sbjct: 384 CGFALKAEHLFEKLKSNGFSPDAVTYNSLL 413
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 6/154 (3%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N+L + +R + AI + S+ PD++T N +I+ R F L
Sbjct: 334 PDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVY---GRCGFALKA 390
Query: 123 LGLVFK---TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIING 179
L K G P T N+++ E N + M G+ + T+ II+
Sbjct: 391 EHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHM 450
Query: 180 FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ K G + A+ R+M P+AV Y ++D
Sbjct: 451 YGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLID 484
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 73/177 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ L A+ F M + P + +N++ + R A L ++ S+G
Sbjct: 342 LISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNG 401
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+PD T N ++ T + + K G T NTI++ A+
Sbjct: 402 FSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEAL 461
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R M+++G P++ T+ +I+ K E A M M++ +P Y+A++
Sbjct: 462 RLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALI 518
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 72/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ + ML +N+L R + A L+ G D T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC T L ++ +F + P+ + N ++N C V A+ F R M G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ ++ING CK+G + A+ + + P+AV YN ++
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHS 93
+L++ + + +D A A ML+ P P +N+L +V + A L K
Sbjct: 310 YLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G PD +T NI+I+ LC L L + K G P T +++G C + +
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M G N+ + +I CK G + A+ M + C+P+ +N+++
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 214 G 214
G
Sbjct: 486 G 486
Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F+ ML+ P V F + +A SL++ G P+ ++I+ L
Sbjct: 188 FYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSE 247
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
R + +L +F G P T N +++GLC + A M + ++
Sbjct: 248 NNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +++G C++G + A R M+ + PN V+YN +++G
Sbjct: 308 QGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLING 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+A + M+ A P FN + + + + +A+ + G P++ T I+
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C V+ + GL T N ++ LC + + A+ M + G
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ YTF ++I G CK E A+ R+M+ N V YN ++
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D+A + M P + L ++ A+ L++ G PD+ T N
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275
Query: 106 VINCLCHLRRT-------------------------AFGLSVLGLVFKTGL------RPT 134
VI+ LC R GL +G V + P
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPN 335
Query: 135 TATLNTIVNGLCLENNVASAVTFT-RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T NT++NG + A ++M AG++P+++TF +I+G CK G SA+ +
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395
Query: 194 RNMVERHCEPNAVVYNAIMDG 214
MV++ EPN + Y ++DG
Sbjct: 396 DEMVKKGFEPNVITYTILIDG 416
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 61/147 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ + + QM FP + N L RT A+ ++ G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI T N +IN LC + R L++ + G+ P T NT+++ C E A
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDAC 672
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G+ PN T+ +IN F K
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 61.2 bits (147), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 65/146 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + +T + LI++ + P I + NI+IN C + L L +
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ GL P T N+++NGLC A+ ++ G P++ T+ +I+ +C G
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A + V PN + ++ +++
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILIN 695
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 63/152 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K +N + + A ++ S G++P +YT +V+ C + S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + K G P + +++ L N V A+ M G +P+ TF +I+G CK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A M+ R +A++ +M G
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F +M+ P V + L + H+ A ++ + G++ + N
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + L + G + G +P T N+++ GLC + + A+ R M G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N+ T+ +I+ F ++ + A + M R C + + YN ++
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ + +M + P + FNSL + + A+ L + GV + T N +I+
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L ++G + G T N ++ LC + M P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +IN FC+ G A+ +R+M++R P+ V YN++++G
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 72/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ + ML +N+L R + A L+ G D T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC T L ++ +F + P+ + N ++N C V A+ F R M G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ ++ING CK+G + A+ + + P+AV YN ++
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHS 93
+L++ + + +D A A ML+ P P +N+L +V + A L K
Sbjct: 310 YLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G PD +T NI+I+ LC L L + K G P T +++G C + +
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M G N+ + +I CK G + A+ M + C+P+ +N+++
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 214 G 214
G
Sbjct: 486 G 486
Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F+ ML+ P V F + +A SL++ G P+ ++I+ L
Sbjct: 188 FYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSE 247
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
R + +L +F G P T N +++GLC + A M + ++
Sbjct: 248 NNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +++G C++G + A R M+ + PN V+YN +++G
Sbjct: 308 QGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLING 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+A + M+ A P FN + + + + +A+ + G P++ T I+
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C V+ + GL T N ++ LC + + A+ M + G
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ YTF ++I G CK E A+ R+M+ N V YN ++
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D+A + M P + L ++ A+ L++ G PD+ T N
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275
Query: 106 VINCLCHLRRT-------------------------AFGLSVLGLVFKTGL------RPT 134
VI+ LC R GL +G V + P
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPN 335
Query: 135 TATLNTIVNGLCLENNVASAVTFT-RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T NT++NG + A ++M AG++P+++TF +I+G CK G SA+ +
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395
Query: 194 RNMVERHCEPNAVVYNAIMDG 214
MV++ EPN + Y ++DG
Sbjct: 396 DEMVKKGFEPNVITYTILIDG 416
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 61/147 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ + + QM FP + N L RT A+ ++ G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI T N +IN LC + R L++ + G+ P T NT+++ C E A
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDAC 672
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G+ PN T+ +IN F K
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 61.2 bits (147), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 65/146 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + +T + LI++ + P I + NI+IN C + L L +
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ GL P T N+++NGLC A+ ++ G P++ T+ +I+ +C G
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A + V PN + ++ +++
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILIN 695
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 63/152 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K +N + + A ++ S G++P +YT +V+ C + S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + K G P + +++ L N V A+ M G +P+ TF +I+G CK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A M+ R +A++ +M G
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F +M+ P V + L + H+ A ++ + G++ + N
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + L + G + G +P T N+++ GLC + + A+ R M G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N+ T+ +I+ F ++ + A + M R C + + YN ++
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ + +M + P + FNSL + + A+ L + GV + T N +I+
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L ++G + G T N ++ LC + M P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +IN FC+ G A+ +R+M++R P+ V YN++++G
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 72/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ + ML +N+L R + A L+ G D T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC T L ++ +F + P+ + N ++N C V A+ F R M G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ ++ING CK+G + A+ + + P+AV YN ++
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHS 93
+L++ + + +D A A ML+ P P +N+L +V + A L K
Sbjct: 310 YLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G PD +T NI+I+ LC L L + K G P T +++G C + +
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M G N+ + +I CK G + A+ M + C+P+ +N+++
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 214 G 214
G
Sbjct: 486 G 486
Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F+ ML+ P V F + +A SL++ G P+ ++I+ L
Sbjct: 188 FYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSE 247
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
R + +L +F G P T N +++GLC + A M + ++
Sbjct: 248 NNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +++G C++G + A R M+ + PN V+YN +++G
Sbjct: 308 QGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLING 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+A + M+ A P FN + + + + +A+ + G P++ T I+
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C V+ + GL T N ++ LC + + A+ M + G
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ YTF ++I G CK E A+ R+M+ N V YN ++
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D+A + M P + L ++ A+ L++ G PD+ T N
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275
Query: 106 VINCLCHLRRT-------------------------AFGLSVLGLVFKTGL------RPT 134
VI+ LC R GL +G V + P
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPN 335
Query: 135 TATLNTIVNGLCLENNVASAVTFT-RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T NT++NG + A ++M AG++P+++TF +I+G CK G SA+ +
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395
Query: 194 RNMVERHCEPNAVVYNAIMDG 214
MV++ EPN + Y ++DG
Sbjct: 396 DEMVKKGFEPNVITYTILIDG 416
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 61/147 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ + + QM FP + N L RT A+ ++ G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI T N +IN LC + R L++ + G+ P T NT+++ C E A
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDAC 672
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G+ PN T+ +IN F K
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 61.2 bits (147), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 65/146 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + +T + LI++ + P I + NI+IN C + L L +
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ GL P T N+++NGLC A+ ++ G P++ T+ +I+ +C G
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A + V PN + ++ +++
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILIN 695
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 63/152 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K +N + + A ++ S G++P +YT +V+ C + S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + K G P + +++ L N V A+ M G +P+ TF +I+G CK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A M+ R +A++ +M G
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F +M+ P V + L + H+ A ++ + G++ + N
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + L + G + G +P T N+++ GLC + + A+ R M G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N+ T+ +I+ F ++ + A + M R C + + YN ++
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ + +M + P + FNSL + + A+ L + GV + T N +I+
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L ++G + G T N ++ LC + M P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +IN FC+ G A+ +R+M++R P+ V YN++++G
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 72/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ + ML +N+L R + A L+ G D T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC T L ++ +F + P+ + N ++N C V A+ F R M G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ ++ING CK+G + A+ + + P+AV YN ++
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHS 93
+L++ + + +D A A ML+ P P +N+L +V + A L K
Sbjct: 310 YLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G PD +T NI+I+ LC L L + K G P T +++G C + +
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M G N+ + +I CK G + A+ M + C+P+ +N+++
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 214 G 214
G
Sbjct: 486 G 486
Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F+ ML+ P V F + +A SL++ G P+ ++I+ L
Sbjct: 188 FYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSE 247
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
R + +L +F G P T N +++GLC + A M + ++
Sbjct: 248 NNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +++G C++G + A R M+ + PN V+YN +++G
Sbjct: 308 QGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLING 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+A + M+ A P FN + + + + +A+ + G P++ T I+
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C V+ + GL T N ++ LC + + A+ M + G
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ YTF ++I G CK E A+ R+M+ N V YN ++
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D+A + M P + L ++ A+ L++ G PD+ T N
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275
Query: 106 VINCLCHLRRT-------------------------AFGLSVLGLVFKTGL------RPT 134
VI+ LC R GL +G V + P
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPN 335
Query: 135 TATLNTIVNGLCLENNVASAVTFT-RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T NT++NG + A ++M AG++P+++TF +I+G CK G SA+ +
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395
Query: 194 RNMVERHCEPNAVVYNAIMDG 214
MV++ EPN + Y ++DG
Sbjct: 396 DEMVKKGFEPNVITYTILIDG 416
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 61/147 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ + + QM FP + N L RT A+ ++ G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI T N +IN LC + R L++ + G+ P T NT+++ C E A
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDAC 672
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G+ PN T+ +IN F K
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 61.2 bits (147), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 65/146 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + +T + LI++ + P I + NI+IN C + L L +
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ GL P T N+++NGLC A+ ++ G P++ T+ +I+ +C G
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A + V PN + ++ +++
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILIN 695
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 63/152 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K +N + + A ++ S G++P +YT +V+ C + S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + K G P + +++ L N V A+ M G +P+ TF +I+G CK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A M+ R +A++ +M G
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F +M+ P V + L + H+ A ++ + G++ + N
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + L + G + G +P T N+++ GLC + + A+ R M G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N+ T+ +I+ F ++ + A + M R C + + YN ++
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ + +M + P + FNSL + + A+ L + GV + T N +I+
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L ++G + G T N ++ LC + M P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +IN FC+ G A+ +R+M++R P+ V YN++++G
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 72/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ + ML +N+L R + A L+ G D T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC T L ++ +F + P+ + N ++N C V A+ F R M G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ ++ING CK+G + A+ + + P+AV YN ++
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHS 93
+L++ + + +D A A ML+ P P +N+L +V + A L K
Sbjct: 310 YLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G PD +T NI+I+ LC L L + K G P T +++G C + +
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M G N+ + +I CK G + A+ M + C+P+ +N+++
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 214 G 214
G
Sbjct: 486 G 486
Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F+ ML+ P V F + +A SL++ G P+ ++I+ L
Sbjct: 188 FYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSE 247
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
R + +L +F G P T N +++GLC + A M + ++
Sbjct: 248 NNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +++G C++G + A R M+ + PN V+YN +++G
Sbjct: 308 QGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLING 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+A + M+ A P FN + + + + +A+ + G P++ T I+
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C V+ + GL T N ++ LC + + A+ M + G
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ YTF ++I G CK E A+ R+M+ N V YN ++
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D+A + M P + L ++ A+ L++ G PD+ T N
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275
Query: 106 VINCLCHLRRT-------------------------AFGLSVLGLVFKTGL------RPT 134
VI+ LC R GL +G V + P
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPN 335
Query: 135 TATLNTIVNGLCLENNVASAVTFT-RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T NT++NG + A ++M AG++P+++TF +I+G CK G SA+ +
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395
Query: 194 RNMVERHCEPNAVVYNAIMDG 214
MV++ EPN + Y ++DG
Sbjct: 396 DEMVKKGFEPNVITYTILIDG 416
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 61/147 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ + + QM FP + N L RT A+ ++ G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI T N +IN LC + R L++ + G+ P T NT+++ C E A
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDAC 672
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCK 182
+ G+ PN T+ +IN F K
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 61.2 bits (147), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 65/146 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + +T + LI++ + P I + NI+IN C + L L +
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ GL P T N+++NGLC A+ ++ G P++ T+ +I+ +C G
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A + V PN + ++ +++
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILIN 695
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 63/152 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K +N + + A ++ S G++P +YT +V+ C + S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + K G P + +++ L N V A+ M G +P+ TF +I+G CK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A M+ R +A++ +M G
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F +M+ P V + L + H+ A ++ + G++ + N
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + L + G + G +P T N+++ GLC + + A+ R M G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N+ T+ +I+ F ++ + A + M R C + + YN ++
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ + +M + P + FNSL + + A+ L + GV + T N +I+
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L ++G + G T N ++ LC + M P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +IN FC+ G A+ +R+M++R P+ V YN++++G
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 72/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ + ML +N+L R + A L+ G D T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC T L ++ +F + P+ + N ++N C V A+ F R M G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ ++ING CK+G + A+ + + P+AV YN ++
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFT-FVARTKHYAAAISLIKRAHS 93
+L++ + + +D A A ML+ P P +N+L +V + A L K
Sbjct: 310 YLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G PD +T NI+I+ LC L L + K G P T +++G C + +
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A M G N+ + +I CK G + A+ M + C+P+ +N+++
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 214 G 214
G
Sbjct: 486 G 486
Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F+ ML+ P V F + +A SL++ G P+ ++I+ L
Sbjct: 188 FYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSE 247
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
R + +L +F G P T N +++GLC + A M + ++
Sbjct: 248 NNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +++G C++G + A R M+ + PN V+YN +++G
Sbjct: 308 QGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLING 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
+A + M+ A P FN + + + + +A+ + G P++ T I+
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C V+ + GL T N ++ LC + + A+ M + G
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+P+ YTF ++I G CK E A+ R+M+ N V YN ++
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ + + QM FP + N L RT A+ ++ G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI T N +IN LC + R L++ + G+ P T NT+++ C E A
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDAC 672
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKI-----GDTESAVLCMRN 195
+ G+ PN T+ +IN F K D+E + M N
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYFVKKHQRDNSDSEQFTILMGN 717
Score = 63.5 bits (153), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D+A + M P + L ++ A+ L++ G PD+ T N
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275
Query: 106 VINCLCHLRRT-------------------------AFGLSVLGLVFKTGL------RPT 134
VI+ LC R GL +G V + P
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPN 335
Query: 135 TATLNTIVNGLCLENNVASAVTFT-RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T NT++NG + A ++M AG++P+++TF +I+G CK G SA+ +
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395
Query: 194 RNMVERHCEPNAVVYNAIMDG 214
MV++ EPN + Y ++DG
Sbjct: 396 DEMVKKGFEPNVITYTILIDG 416
Score = 61.2 bits (147), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 65/146 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + +T + LI++ + P I + NI+IN C + L L +
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ GL P T N+++NGLC A+ ++ G P++ T+ +I+ +C G
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMD 213
A + V PN + ++ +++
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILIN 695
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 63/152 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K +N + + A ++ S G++P +YT +V+ C + S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + K G P + +++ L N V A+ M G +P+ TF +I+G CK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G A M+ R +A++ +M G
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L +A+ F +M+ P V + L + H+ A ++ + G++ + N
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC + L + G + G +P T N+++ GLC + + A+ R M G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N+ T+ +I+ F ++ + A + M R C + + YN ++
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ + +M + P + FNSL + + A+ L + GV + T N +I+
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L ++G + G T N ++ LC + M P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + +IN FC+ G A+ +R+M++R P+ V YN++++G
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 3/174 (1%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R LK ++ A FHQ+ + NS+ + R + A ++ H SG+ P++
Sbjct: 637 RQLKGMERA---FHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNL 693
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T N +I+ + +L + +G+ P + NT++ G C + V A+
Sbjct: 694 VTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSE 753
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G QP TF ++ + G A +R M+E C PN + Y ++DG
Sbjct: 754 MTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDG 807
Score = 62.4 bits (150), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRT-AFGLSVL 123
VK ++ ART Y AI + ++ +G+ P + T N++++ + R + L +L
Sbjct: 237 VKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELL 296
Query: 124 GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
+ GL T T+++ E + A F ++ GY+P + T+ +++ F K
Sbjct: 297 DEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKA 356
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G A+ ++ M + +CEP+A+ YN ++
Sbjct: 357 GVYTEALNILKEMEDNNCEPDAITYNELV 385
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQML----AANPFPCVKDFNSLFTFVARTKHYAAAISLIKRA 91
++NS+ S+ + + H+ML + P + +NSL AR A ++K
Sbjct: 660 VINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDI 719
Query: 92 HSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
+SG++PD+ + N VI C + +L + G++P T NT ++
Sbjct: 720 QNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLF 779
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
A A R+M G PN T+ +I+G+ K
Sbjct: 780 AEADEVIRYMIEHGCMPNELTYKIVIDGYIK 810
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 66/167 (39%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A FF + P +NS+ + Y A++++K + PD T N
Sbjct: 324 LDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNE 383
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ G +V+ + G+ P T T++N + A+ M+ G
Sbjct: 384 LVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELG 443
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
PN T+ ++ K +E + + +M C P+ + +N ++
Sbjct: 444 CVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTML 490
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 68/166 (40%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ F QM P V +N++ + + I ++ +G PD T N +
Sbjct: 430 DKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTM 489
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+ + F VL + G P T NT+++ + M AG+
Sbjct: 490 LAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGF 549
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P T+ A++N + G+ ++A + +M ++ +PN Y+ ++
Sbjct: 550 TPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLL 595
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 68.2 bits (165), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 75/169 (44%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A + M F ++ +N+ + R S++ +G+ P+IY+ NI
Sbjct: 309 MEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNI 368
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
V++ LC ++ L+ G+ P T T T+++G C + V A M G
Sbjct: 369 VMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKG 428
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+YT ++N K G A ++ M E+ + + V N +++G
Sbjct: 429 CHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNG 477
Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL +R+ K L+ + +M+ P + +N + + R A L+ S+G
Sbjct: 335 LLGLLRNGKLLEGR-SVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNG 393
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD T +++ C + ++L + + G P T T NT++N L E + A
Sbjct: 394 VYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAE 453
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
+ M YQ ++ T ++NG C+ G+ E A
Sbjct: 454 EMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKA 487
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 66/153 (43%)
Query: 61 PFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGL 120
P P V FN + + A SL++ G + + N + L + G
Sbjct: 289 PKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGR 348
Query: 121 SVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
SVL + + G+ P + N +++GLC + + A M + G P++ T+ +++G+
Sbjct: 349 SVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGY 408
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
C G A + M+ + C PN N +++
Sbjct: 409 CSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLN 441
Score = 54.7 bits (130), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 126 VFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+ +TG+ P T T N ++ LC N + A M G QPN +T G ++ GFC+ G
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIM 212
T+ A+ + + + N VVYN ++
Sbjct: 202 TKQALEFVDGKMGGNV--NRVVYNTLV 226
Score = 54.3 bits (129), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV---LG 124
+N+L + + A L++R G+ PD+ T N I+ LC + + +
Sbjct: 222 YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQ 281
Query: 125 LVFKTGL-RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
+ + GL +P T N ++ G C E + A + M+ G + ++ + G +
Sbjct: 282 MDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRN 341
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + MVE EPN YN +MDG
Sbjct: 342 GKLLEGRSVLDEMVENGIEPNIYSYNIVMDG 372
Score = 51.6 bits (122), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 24/189 (12%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A A ++M+ P N+L + + + A ++++ + D T NIV+N
Sbjct: 417 AKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVN 476
Query: 109 CLC---HLRRTAFGLS---------------VLGLV-----FKTGLRPTTATLNTIVNGL 145
LC L + + +S V GLV T + P T T++NGL
Sbjct: 477 GLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNV-PDVITYTTLINGL 535
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
C + A M P+S T+ + FCK G SA+ +++M C
Sbjct: 536 CKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTL 595
Query: 206 VVYNAIMDG 214
YN+++ G
Sbjct: 596 QTYNSLILG 604
Score = 50.8 bits (120), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 21/165 (12%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + + L+ A F +M+A N P +++ + ++A+ ++K +G
Sbjct: 531 LINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNG 590
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT----------GLRPTTATLNTIVNGL 145
+ + T N +I GL G +F+ G+ P T N ++N L
Sbjct: 591 CSKTLQTYNSLI----------LGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCL 640
Query: 146 CLENNVASAVTFTRHMENAGY-QPNSYTFGAIINGFCKIGDTESA 189
C A + M + G PN +F +I FCK GD + A
Sbjct: 641 CEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVA 685
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 6/168 (3%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
+ + M+ P FN L + + A L + G P+ +T+ I++
Sbjct: 137 SLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGF 196
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C RT L + K G NT+V+ C ++ A M G P+
Sbjct: 197 CRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERH----CEPNAVVYNAIMDG 214
TF + I+ C+ G A R+M +PN V +N ++ G
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKG 302
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVK-DFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
L+ A ++H + N F ++ T + K++ SL++ G+ PDI+ N
Sbjct: 60 LNLAENYYHHHVIPNGFSLTPFTYSRFITALCSVKNFLLIESLLRDMDDLGIVPDIWAFN 119
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
I +N LC R L + + G +P + I++ LC V R + ++
Sbjct: 120 IYLNILCRENRLETALQLFQTMPLKGRKPDVVSYTIIIDALCKVKRFDEVVHVWRKLIDS 179
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G +P+ A++ G C G + A + ++ E N +VYNA++ G
Sbjct: 180 GLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHG 229
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + FN + R A+ L + G PD+ + I+I+ LC ++R + V
Sbjct: 113 PDIWAFNIYLNILCRENRLETALQLFQTMPLKGRKPDVVSYTIIIDALCKVKRFDEVVHV 172
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ +GL+P +V GLC V A + + G + N + A+I+GF K
Sbjct: 173 WRKLIDSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHGFYK 232
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+G + A M + C P+ V YN +++
Sbjct: 233 MGKKDKAEAIRGFMSKNGCAPDLVTYNILLN 263
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 4/147 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ + + A L + G+ PD+ T ++I LR+ ++ LV
Sbjct: 327 YNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAF--LRKGGSNVANKLLVE 384
Query: 128 KTGLR--PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGD 185
+R P T+V+ C N+ A M G P+ ++ AIINGFCK
Sbjct: 385 MKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNAIINGFCKASR 444
Query: 186 TESAVLCMRNMVERHCEPNAVVYNAIM 212
A M + +P+ V +N I+
Sbjct: 445 VMGAWRLYEEMQVKGLDPDEVTFNLIV 471
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++++ +K D V + +++ + P K +L + + A L+ S G
Sbjct: 156 IIDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGG 215
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V + N +I+ + + ++ G + K G P T N ++N C E V A
Sbjct: 216 VEVNCLVYNALIHGFYKMGKKDKAEAIRGFMSKNGCAPDLVTYNILLNYGCDEVTVDEAE 275
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
ME +G + Y++ ++ FCK + A L M N ++ +AV YN I+
Sbjct: 276 RLVETMERSG-MADLYSYNELLKAFCKAYQVDRAYLYMVNKMQSKGVCDAVSYNTII 331
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 83 AAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIV 142
A + ++ + S GV D + N +I C +RRT + + + G++P T ++
Sbjct: 308 AYLYMVNKMQSKGVC-DAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLI 366
Query: 143 NGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+ A M+ P+ + +++ CK G+ + A +MVE
Sbjct: 367 KAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVS 426
Query: 203 PNAVVYNAIMDG 214
P+ V YNAI++G
Sbjct: 427 PDVVSYNAIING 438
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S R +A F++ML P + F+S+ +R A++ ++ G
Sbjct: 183 LVESFRKEDVWEAE-RVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVG 241
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD I+IN C + L V + + T NT++NGLC + A
Sbjct: 242 LVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDAD 301
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIG----------------DTESAVLCMRNMVER 199
+ M G P+ YT +I+G+CK G + E A R+M+ R
Sbjct: 302 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISR 361
Query: 200 HCEPNAVVYNAIMDG 214
P+ + ++ +++G
Sbjct: 362 EIFPHYISFSILING 376
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
+ +M A P + +N+L + + Y +A ++ + G PD T N V+
Sbjct: 128 YLSEMEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESF 187
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSY 171
V + + G+ P + ++I+ + A+ + M+ G P++
Sbjct: 188 RKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTV 247
Query: 172 TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +ING+C+ D A+ MVER C + V YN +++G
Sbjct: 248 IYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNG 290
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 67/179 (37%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + ++A +ML P FN + R + A + G
Sbjct: 147 LINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVWEAERVFNEMLQCG 206
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD+ + + +I L+ + GL P T ++NG C N+V+ A+
Sbjct: 207 VVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGAL 266
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + T+ ++NG C+ + A + MVER P+ ++ G
Sbjct: 267 KVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG 325
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 72/198 (36%), Gaps = 47/198 (23%)
Query: 64 CVKD---FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGL 120
CV D +N+L + R K A L K GV PD YTL +I+ C L
Sbjct: 277 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 336
Query: 121 SVLGLV----------------FKTGLRPTTATLNTIVNGLC--------------LENN 150
S+ + + P + + ++NG C N
Sbjct: 337 SLFETITLRSEMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSESLIKGYLRAGN 396
Query: 151 VASAVTFTRHMENAGYQPNSYTFGAIIN--------------GFCKIGDTESAVLCMRNM 196
V+ A F M + G P+ T+ +IN GF + G + A + + M
Sbjct: 397 VSKANDFLNTMVSEGVPPDCITYNTLINRLLPDLVTYNAILGGFSRHGRMQEAEMVLHKM 456
Query: 197 VERHCEPNAVVYNAIMDG 214
+++ P+ Y ++++G
Sbjct: 457 IDKGINPDKSTYTSVING 474
>Medtr3g104020.1 | PPR superfamily protein | LC |
chr3:47925706-47924189 | 20130731
Length = 439
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG-----V 96
S+K ++ A F+ ML P + DFNSLF + + + L K+ S V
Sbjct: 64 SVKAVNLATNRFNSMLGYYP---ISDFNSLFYSLPDIHQHRTILKLAKKFESQPPDSHYV 120
Query: 97 APDIYTLNIVINCLCHLRRTAF--GLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
PDI T I+ C H R F + + +T RP+T+ LN + LC+ ++ +
Sbjct: 121 VPDIDTCLILFTC--HARSGNFSSAFFLFREIIETDHRPSTSILNDLFRSLCIRGHIYNY 178
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
+T +G+Q N T+ ++NG C+IG+ + A+ R +
Sbjct: 179 ITL-----KSGFQLNDITYYLLVNGLCRIGEAQRAIHLFRQV 215
>Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30062096-30061545 | 20130731
Length = 183
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 56 MLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRR 115
M N P V +NSL ++ + A+ L+ H G P+I T N +++ LC
Sbjct: 1 MHCKNIIPDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHH 60
Query: 116 TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGA 175
+++L + G++P T ++ GLC + A + GY + Y +
Sbjct: 61 LDKAITLLSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAYAV 120
Query: 176 IINGFCKIGDTESAVLCMRNM-VERHCEPNA 205
+I+GFC G + A+ + M + +C PNA
Sbjct: 121 MIHGFCNNGLFDEALAMLSKMTTDNNCNPNA 151
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 39/82 (47%)
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P N++++G C ++ A+ M + G PN T+ +I++ CK + A+
Sbjct: 8 PDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHHLDKAITL 67
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+ + ++ +PN Y ++ G
Sbjct: 68 LSKLKDQGIQPNIYTYTILIGG 89
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 74 FVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRP 133
F+ AAA L + GV PD+YT N ++N LC R ++ + K+G P
Sbjct: 139 FLCLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHP 198
Query: 134 TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T NT++ G +N A R M N G QPN T I+ C+ G E A
Sbjct: 199 NCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKA---- 254
Query: 194 RNMVER-------HCEPNAVVYNAIMD 213
RNM+++ P+ V +MD
Sbjct: 255 RNMLDKILNDDNGEATPDLVASTTLMD 281
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKH----YAAAISLIKRAHSSGVAPDIYT 102
+ A+ +++M+ V +N L V R + Y A ++K+ G+ PD++T
Sbjct: 290 NQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKK----GLIPDVFT 345
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
NI+I+ LC + + + G++ K + P + +++GLCL +V A M
Sbjct: 346 YNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCML 405
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N P + + II+ + + D +A L M+ PN YNA++
Sbjct: 406 NNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALI 455
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 126 VFKTGLRPTTATLNTIVNG-----LCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+ K GL N + N LCLE +A+A M G P+ YT I+NG
Sbjct: 116 LVKIGLHGYAFEYNNVENAATIRFLCLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGL 175
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
C+ G E+A +R M++ PN + YN ++ G
Sbjct: 176 CENGRMENADFLVRQMLKSGPHPNCITYNTLIKG 209
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
D+ N++IN +C ++ + K GL P T N +++ LC E ++ A
Sbjct: 307 DVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYLF 366
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDT---ESAVLCMRN--MVERHCEPNAVVYNAIMD 213
M P+ ++ +I+G C GD + +LCM N MV P A+++N I+D
Sbjct: 367 GVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMV-----PQAIIWNLIID 421
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 67.8 bits (164), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 1/171 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ LD AV F ++ PCV +N++ + A SL++R G P +
Sbjct: 322 RRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAY 381
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N ++ CL + L + + + P T N +++ LC + +A+ M+
Sbjct: 382 NCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKE 440
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
AG PN T +I+ CK + A + + C P++ + +++DG
Sbjct: 441 AGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 54 HQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
H + + P + +N L + + AA+ + +G+ P+I T+NI+I+ LC
Sbjct: 401 HDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKA 460
Query: 114 RRTAFGLSV-LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
++ S+ LGL K P + T ++++GL V A + M ++ PN
Sbjct: 461 QKLDEACSIFLGLDHKV-CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVV 519
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ ++I F K G E + MV R C P+ ++ N+ MD
Sbjct: 520 YTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMD 560
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 72/164 (43%)
Query: 51 AFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL 110
A F ++ A P V+ ++ L + + L G+ D+ N VI+
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632
Query: 111 CHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNS 170
C + +L + GL+PT T ++V+GL + + A ++ G N
Sbjct: 633 CKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692
Query: 171 YTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++I+GF K+G + A L + ++++ PN+ +N ++D
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDA 736
Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 69/177 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ ++ + D + FHQM V F +L AR AA+SL+ S+
Sbjct: 209 LIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNS 268
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
D+ N+ I+C + + + GL P T T++ LC + AV
Sbjct: 269 FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAV 328
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ P Y + +I G+ G + A + + C P+ + YN I+
Sbjct: 329 ELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCIL 385
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ +M+ P + NS V + +L + + G+ PD+ + +I+I+ L
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV- 598
Query: 113 LRRTAFGLSVLGLVFKT---GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
+ F L ++ GL NT+++G C V A M+ G QP
Sbjct: 599 --KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+G++++G KI + A + + N V+Y++++DG
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 74/169 (43%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A +M P V + S+ +A+ A L + A S GV ++ +
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSS 697
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I+ + R +L + + GL P + T N +++ L + A ++M+N
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
PN+ T+ +ING C I A + + M ++ +PN + Y ++ G
Sbjct: 758 CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAG 806
Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 8/183 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ + + LD A F + + V ++SL + A +++ G
Sbjct: 663 VVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 722
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P+ YT N +++ L + P T + ++NGLC+ A
Sbjct: 723 LTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAF 782
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE----PNAVVYNAI 211
F + M+ G +PN+ T+ +I G K G+ A R + +R P++ YNA+
Sbjct: 783 VFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEA----RGLFDRFKASGGVPDSACYNAM 838
Query: 212 MDG 214
++G
Sbjct: 839 IEG 841
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 69/179 (38%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + +D A +++ P +N L + + + A + +
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P+ T +I+IN LC +R+ + K GL+P T T++ GL NV A
Sbjct: 758 CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEAR 817
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ +G P+S + A+I G A + + C N+ ++D
Sbjct: 818 GLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDA 876
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + +N + + K A++L K+ H + P++ T +I+ LC + ++ L +
Sbjct: 8 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKL 67
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA--------GYQPNSYTFG 174
+ + G+ P T ++I++ LC + V A+ +++ GY + Y +
Sbjct: 68 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYT 127
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+I GFC G A+ + M + C P+A Y I+
Sbjct: 128 VMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIII 165
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M N P V + SL + ++ + A+ L+ H G
Sbjct: 16 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 75
Query: 96 VAPDIYTLNIVINCLC--HLRRTAFGL------SVLGLVFKTGLRPTTATLNTIVNGLCL 147
V PDI T + +++ LC H A L V +F G ++ G C+
Sbjct: 76 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCV 135
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
+ A+ ME+ G P++ T+ II K + + A +R M+ R
Sbjct: 136 KGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 187
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
GV PD + NI+IN C +++ +++ + + P T ++++GLC ++
Sbjct: 3 QGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKIS 62
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
A+ M + G P+ T+ +I++ CK + A+ + + ++
Sbjct: 63 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 109
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G+ P T + N ++NG C V A+ + M PN T+ ++I+G CK G A
Sbjct: 5 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYA 64
Query: 190 VLCMRNMVERHCEPNAVVYNAIMD 213
+ + M +R P+ + Y++I+D
Sbjct: 65 LKLVDEMHDRGVPPDIITYSSILD 88
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI+T + +I+ LC L+RT + + G+ P N ++ LC +V
Sbjct: 41 LKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSV 100
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
R M+ G P+ Y++ A+I FC++ E A +M + P+ Y+A +
Sbjct: 101 KLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFI 157
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G P++ T NI+IN C L ++ + L+P T + I++GLC A
Sbjct: 5 GFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEA 64
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G PN+ + +I C IG+T +V +R M E P+ YNA++
Sbjct: 65 FECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQ 123
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 55 QMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHL 113
+ML N P + F+ + + R K A GV P+ NI+I LC +
Sbjct: 34 EMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSI 93
Query: 114 RRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTF 173
T + +L + + G+ P + N ++ C N V A M +G+ P++YT+
Sbjct: 94 GETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTY 153
Query: 174 GAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A I + G E A ++ C P++ V N ++
Sbjct: 154 SAFIAALSESGRLEEAKKMFYSIEANGCSPDSYVCNLVI 192
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 5/178 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+++ + LK + A F++M+ P +N L + ++ L++R G
Sbjct: 51 IIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEG 110
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PDIY+ N +I C + + + + K+G P T + + L + A
Sbjct: 111 ISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAK 170
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+E G P+SY +I + E A + +VER C + N +D
Sbjct: 171 KMFYSIEANGCSPDSYVCNLVIKALVRHDRVEEA----QKIVER-CRQKGIALNCTLD 223
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
L ++ A+ H+M P V + L + ++ A + K G PD+
Sbjct: 278 KLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVV 337
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS-AVTFTRH 160
+N +IN L R + + + P T NTI+ L + S A ++
Sbjct: 338 LMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLER 397
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+ G P+S+T+ +I+GFCK E A+L + M E+ P Y ++++
Sbjct: 398 MKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 450
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG-VAPDIY 101
+K ++ A++ F+Q+ P +NS+ + + H+ L S G PD
Sbjct: 173 VKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTV 232
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
T + +I+ L R + + + + GL+PT T++ V A+ M
Sbjct: 233 TYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEM 292
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P YT+ +I G K G E A +NM++ C+P+ V+ N +++
Sbjct: 293 RMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLIN 344
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 3/182 (1%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTK-HYAAAISLIKRAHS 93
+L+N + L AV F +M N P V +N++ + K + A S ++R
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKK 400
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
GV P +T +I+I+ C R L +L + + G P A +++N L +
Sbjct: 401 DGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEA 460
Query: 154 A-VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A F EN G + + +I F K G A+ M + C P+ YNA++
Sbjct: 461 ANELFQELKENCG-SSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALI 519
Query: 213 DG 214
G
Sbjct: 520 TG 521
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 7/153 (4%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A+ F++M P V +N+L T + R A SL + +G PDI + NI
Sbjct: 493 FNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNI 552
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N L + + + + ++P + NT++ L A + M + G
Sbjct: 553 ILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKG 612
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
++ + T+ +I+ K+ + RNM E
Sbjct: 613 FEYDLITYSSILEAVGKVDED-------RNMAE 638
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A + ML P V N+L + R+ A+ L + P++ T N
Sbjct: 317 VEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT 376
Query: 106 VINCLCHLRRT-AFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+I L + + S L + K G+ P++ T + +++G C N V A+ M+
Sbjct: 377 IIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 436
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G+ P + ++IN K E+A + + E +C ++V A+M
Sbjct: 437 GFPPCPAAYCSLINSLGKAKRYEAANELFQELKE-NCGSSSVRVYAVM 483
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 67/167 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ +M PC + SL + + K Y AA L + + + + +
Sbjct: 423 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAV 482
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I R + + + K G P N ++ G+ + + A + R ME G
Sbjct: 483 MIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENG 542
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ + I+NG + G + A+ M +P+AV YN ++
Sbjct: 543 CNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVL 589
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 1/180 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+++ L D+AV F +M P K + +L + A++L+
Sbjct: 237 LISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRR 296
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P +YT +I L R V + K G +P +N ++N L + + AV
Sbjct: 297 CVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAV 356
Query: 156 TFTRHMENAGYQPNSYTFGAIING-FCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M PN T+ II F A + M + P++ Y+ ++DG
Sbjct: 357 ELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDG 416
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 67/152 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P + + L + + A+ + + + G+ ++ T +++ N L+ A SV
Sbjct: 476 PSIVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNMKTYSMLFNGFVKLKDWANAFSV 535
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K GL+P N IV C N+ A+ + M+ ++ + TF II+GF +
Sbjct: 536 FEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLPIIHGFAR 595
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G+T A+ M C P YNA++ G
Sbjct: 596 AGETRRALEIFDTMRRSGCIPTVHTYNALILG 627
Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 71/172 (41%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+ +D A+ QM + F + AR A+ + SG P ++T
Sbjct: 561 MGNMDRAICIVKQMQRERHRATTRTFLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHT 620
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
N +I L + L +L + G+ P T T++ G + A + ++
Sbjct: 621 YNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILK 680
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N G + + YT+ A++ CK G +SA+ + M + N VYN ++DG
Sbjct: 681 NDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDG 732
Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 68/169 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ +M A P + +L A A + G+ D+YT
Sbjct: 634 MEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEA 693
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ C R L+V + + T N +++G +V A + M G
Sbjct: 694 LLKACCKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEG 753
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
QP+ +T+ + IN CK GD ++A ++ M R +PN Y ++ G
Sbjct: 754 VQPDIHTYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLIHG 802
Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 67/148 (45%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
V + +L ++ +A+++ K S + + + NI+I+ ++
Sbjct: 688 VYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDGWARRGDVWEAADLMQ 747
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ K G++P T + +N C ++ +A + ME G +PN T+ +I+G+ +
Sbjct: 748 QMRKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLIHGWARAA 807
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIM 212
E A+ C ++ +P+ VY+ +M
Sbjct: 808 FPEKALKCFEDLKVAGLKPDRAVYHCLM 835
Score = 54.7 bits (130), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 69/166 (41%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ F M + P V +N+L + A+ ++ + +GV+P+ +T ++
Sbjct: 602 ALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQ 661
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L T ++ GL T ++ C + SA+ T+ M +
Sbjct: 662 GYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPR 721
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
N++ + +I+G+ + GD A M+ M + +P+ Y + ++
Sbjct: 722 NTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINA 767
Score = 54.3 bits (129), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLG 124
+K ++ LF + K +A A S+ + G+ PD+ N ++ C + + ++
Sbjct: 513 MKTYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVK 572
Query: 125 LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
+ + R TT T I++G A+ M +G P +T+ A+I G +
Sbjct: 573 QMQRERHRATTRTFLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALILGLVEKC 632
Query: 185 DTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E A+ + M PN Y +M G
Sbjct: 633 QMEKALQILDEMNLAGVSPNEHTYTTLMQG 662
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 74 FVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRP 133
F+ AAA L + GV PD+YT N ++N LC R ++ + K+G P
Sbjct: 120 FLCLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHP 179
Query: 134 TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T NT++ G +N A R M N G QPN T I+ C+ G E A
Sbjct: 180 NCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKA---- 235
Query: 194 RNMVER-------HCEPNAVVYNAIMD 213
RNM+++ P+ V +MD
Sbjct: 236 RNMLDKILNDDNGEATPDLVASTTLMD 262
Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKH----YAAAISLIKRAHSSGVAPDIYT 102
+ A+ +++M+ V +N L V R + Y A ++K+ G+ PD++T
Sbjct: 271 NQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKK----GLIPDVFT 326
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
NI+I+ LC + + + G++ K + P + +++GLCL +V A M
Sbjct: 327 YNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCML 386
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
N P + + II+ + + D +A L M+ PN YNA++
Sbjct: 387 NNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALI 436
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
D+ N++IN +C ++ + K GL P T N +++ LC E ++ A
Sbjct: 288 DVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYLF 347
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESA---VLCMRN--MVERHCEPNAVVYNAIMD 213
M P+ ++ +I+G C GD A +LCM N MV P A+++N I+D
Sbjct: 348 GVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCMLNNFMV-----PQAIIWNLIID 402
Score = 53.1 bits (126), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 128 KTGLRPTTATLNTIVNG-----LCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
K GL N + N LCLE +A+A M G P+ YT I+NG C+
Sbjct: 99 KIGLHGYAFEYNNVENAATIRFLCLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCE 158
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G E+A +R M++ PN + YN ++ G
Sbjct: 159 NGRMENADFLVRQMLKSGPHPNCITYNTLIKG 190
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 68/169 (40%), Gaps = 3/169 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNS-LFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
+V F M P V FNS L + R + A + + GV PD YT NI+I
Sbjct: 174 SVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILI 233
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA--G 165
C G + P T NT+V+GLC + A M
Sbjct: 234 RGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKD 293
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ T+ +I G+C+ + + A+ + M R +PN V YN ++ G
Sbjct: 294 LSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKG 342
Score = 61.6 bits (148), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FNSL + ++ L + GV+P + T N V+ L RT V +
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 128 KT-GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDT 186
KT G++P T T N ++ G C + V F + M + P+ T+ +++G C+ G
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKI 277
Query: 187 ESAVLCMRNMVERHCE---PNAVVYNAIMDG 214
+ A + N + + C+ P+ V Y ++ G
Sbjct: 278 KVA-HNLVNGMSKKCKDLSPDVVTYTTLIRG 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 3/170 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIK--RAHSSGVAPDIYTL 103
+D FF +M + + P V +N+L + R A +L+ ++PD+ T
Sbjct: 242 VDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTY 301
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME- 162
+I C + L +L + GL+P T NT++ GLC M+
Sbjct: 302 TTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKG 361
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G P++ TF +IN C G+ + A NM + ++ Y+ ++
Sbjct: 362 DGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLI 411
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + +L R + A+ +++ + G+ P+I T N +I LC ++ +
Sbjct: 296 PDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEI 355
Query: 123 L-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFC 181
L + G P T NT++N C N+ A +M+ +S ++ +I C
Sbjct: 356 LEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLC 415
Query: 182 KIGDTESAVLCMRNMVER 199
+ GD A + + E+
Sbjct: 416 QKGDYGKAEMLFDELFEK 433
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
SG +PD +T N +IN C + A ++ + + GL+ T TLNT+++ +CLE +
Sbjct: 415 SGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDD 474
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A T T GY + T+G +I G+ K + A+ M E + YN I+
Sbjct: 475 AYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIR 534
Query: 214 G 214
G
Sbjct: 535 G 535
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 62/152 (40%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN L + A+ LI + G PD T N V+ LC + +
Sbjct: 209 PNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDL 268
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + +GL P T N +V+G C + A M G P+ +T+ ++ G C
Sbjct: 269 LLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD 328
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G + AV M P+ V YN ++DG
Sbjct: 329 EGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 47 DAAVAFFHQMLAANPFPCVKD---FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
+ A+ +QM + C D +N++ T + + L+ + +SG+ P+ T
Sbjct: 228 EEALRLINQM---GEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTY 284
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI+++ C L+ V+ L+ G+ P T NT+V GLC E + AV ME+
Sbjct: 285 NILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMES 344
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ T+ +I+G + +++A + M R + N V +N ++
Sbjct: 345 FKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMI 393
Score = 62.4 bits (150), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAI---SLIKRAHSSGVAPDIYTLNIVINC 109
F++M P + N+L + R+ + + + + A GV P++ T NI+I+
Sbjct: 161 FNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHG 220
Query: 110 LCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPN 169
C T L ++ + + G P T NT++ LC + + M+N+G PN
Sbjct: 221 YCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPN 280
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
T+ +++G+CK+ + A + M + P+ YN ++ G
Sbjct: 281 RNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRG 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 44/94 (46%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI+T NI++ LC GL++ G T T N I++ C E + A
Sbjct: 592 LKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAF 651
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
ME +P+ YT+ AI+ G K G TE A
Sbjct: 652 DLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA 685
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ + +M + +N++ + + A+ + G+ PD T NI+
Sbjct: 508 DRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNII 567
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ C + + L+P T N ++ GLC E + +T + G
Sbjct: 568 IHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGK 627
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ T+ II+ FCK E A M M ++ EP+ YNAI+ G
Sbjct: 628 PMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTG 675
Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 37/205 (18%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A +M+ + P +N++ + A A ++ G+ D +TLN
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNT 461
Query: 106 VINCLCH--------------------LRRTAFGLSVLGLVFK----------------T 129
+++ +C L +G ++G FK T
Sbjct: 462 LLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGY-FKDEQADRALKLWEEMKET 520
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G+ T T NTI+ GLCL AV + G P+ T II+G+C G E A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
MVE +P+ N ++ G
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRG 605
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 73/177 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ L A+ F ++ + N P V +N+L RT + A + G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T I++ C + + + GL+P T + G N + A
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M+ G+ P+ T+ +ING CK+G+ + A ++ M P+ V Y +I+
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Score = 60.8 bits (146), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 57/118 (48%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ P + T ++I+ R F + G+ P T N ++ GLC EN + A
Sbjct: 552 GIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVA 611
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
ME+ G PN YT+ +IN + + A+ ++M++R +P++ ++A+M
Sbjct: 612 YNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALM 669
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 67/167 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ + F++M+ P V++ N + + + + P I T N
Sbjct: 153 LEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNT 212
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ C + VL ++ G P + N +VNGL + A M G
Sbjct: 213 MMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLG 272
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ +++T+ +I GFCK E A R M+ R P V YN IM
Sbjct: 273 LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIM 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 68/160 (42%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
+ML P V +N++ + R + A + + + PD+ + N +I L
Sbjct: 302 EMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLG 361
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
A L + + L P+ T NT+++G C N+ A M G P+ TF
Sbjct: 362 NFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFT 421
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
++ GFC++G+ A M+ R +P+ + Y + G
Sbjct: 422 ILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVG 461
Score = 58.5 bits (140), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 73/179 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++ S+ L + A + M+ + P + +N+L +R ++A A+ L S
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ P + T N +I+ C + + K GL P T +V G C N+ A
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M + G +P+ + I G K+G+ A M P+ + YN +++G
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLING 496
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 71/179 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + D A QM +N L + + + A L + G
Sbjct: 248 LVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRG 307
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
P + T N ++ LC L R + L ++ L P + NT++ G N A A+
Sbjct: 308 ALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEAL 367
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + P+ T+ +I+G C+ G+ + A +M++ P+ V + ++ G
Sbjct: 368 LLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRG 426
Score = 51.6 bits (122), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 4/167 (2%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPD--IYTLNIV 106
A +M A P + +N L + + ++ A L+++ G+ PD YT I
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIH 530
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+ + L R A V + K G+ P+ T +++ + + A + M++ G
Sbjct: 531 AHLISGLLRKA--EEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGV 588
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
PN T+ A+I G CK + A M + PN Y +++
Sbjct: 589 SPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635
Score = 50.8 bits (120), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 54/122 (44%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
++G+ PD+ N V+ L V ++ K +RPT T NT+++ C E V
Sbjct: 165 NNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVG 224
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
AV M G PN ++ ++NG G+ + A + M + +A YN ++
Sbjct: 225 RAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLI 284
Query: 213 DG 214
G
Sbjct: 285 RG 286
Score = 48.5 bits (114), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 72/179 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + L A F +ML+ P + + + + + A + + + G
Sbjct: 423 LVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG 482
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ T N++IN LC L ++ + G+ P T +I++ + + A
Sbjct: 483 FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G P+ T+ +I+ + G + A M ++ PN + YNA++ G
Sbjct: 543 EVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601
>Medtr1g108270.1 | PPR containing plant-like protein | HC |
chr1:48926827-48924799 | 20130731
Length = 509
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 77 RTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF----KTGLR 132
R K A+ +R G+ P I N +I+ LC ++ F + +F + L
Sbjct: 168 RAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLC---KSKFHVEKAQELFDKMRQWNLE 224
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P + ++ G + N+ R M++ G+QP+ T+G IIN +CK + A+
Sbjct: 225 PNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGI 284
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+M+ ++ P+ +Y + G
Sbjct: 285 YHDMLSKNVNPSPHIYCTFITG 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A F +M N P +K + L ++ ++ + + G PD+ T I
Sbjct: 208 VEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGI 267
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN C ++ + + + + P+ T + GL + + A F + +G
Sbjct: 268 IINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASG 327
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ P + T+ A+++ +C + A + M E PNA Y+ I+
Sbjct: 328 FPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIIL 374
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A FF + A+ P +N++ + + A ++ G+ P+ T +I
Sbjct: 313 MDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDI 372
Query: 106 VINCLCHLRRTAFGLSVLG-LVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
++ L RT SV + +TG P+ +T +V C EN + A+ M++
Sbjct: 373 ILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDK 432
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
G P + F +I C + A + M++ P A +++A
Sbjct: 433 GILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSA 478
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN L + + ++ A+ L+++ + + PD+ T+ V+ LC+ R VL V
Sbjct: 246 FNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVE 305
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G NT++ G C V + F + MEN GY PN T+ +I GFC+ +
Sbjct: 306 SLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLD 365
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A+ +M N V ++ ++ G
Sbjct: 366 LALDLFNDMKTDGINRNFVTFDTMIRG 392
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 11/173 (6%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
R + LD A F + P +K FNS+ + + A K SGV D
Sbjct: 125 RVITVLDLAYKF-------HGTPSLKIFNSILDVLVKEDIDMAREFYRKSMMESGVRGDD 177
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
YT I++ LC R G +L L+ G+ P T NT+++ LC V A R
Sbjct: 178 YTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRA----RS 233
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ N PN TF +I+ + K + A++ + P+ V +++
Sbjct: 234 LMNEMVDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVE 286
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 7/180 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++S + L A+ + A + P V + + A +++R S G
Sbjct: 249 LISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLG 308
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D N +I C + + GL L + G P T N ++ G C + A+
Sbjct: 309 GSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLAL 368
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER------HCEP-NAVVY 208
M+ G N TF +I G C G E + M E H P N+++Y
Sbjct: 369 DLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIY 428
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 6/166 (3%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYA--AAISLIKRAHSSGVAPDIYTL 103
D A F +M FP D + T + + K A A ++ + G P I
Sbjct: 436 FDEASEFLAKM--GKLFPRAVDRS--MTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVY 491
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +++ + ++ + P +T N I+ C + + SA+ F +
Sbjct: 492 NSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITA 551
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
G PN+ T+ +I+ C+ GD + A+ MVE+ P+ ++
Sbjct: 552 RGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQCIWK 597
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 4/147 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N+L + R A SL+ V P+ T NI+I+ L +L F
Sbjct: 215 YNTLLHALCRNGKVGRARSLMNEM----VDPNEVTFNILISSYYKEENLVQALVLLEKCF 270
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
L P T+ +V LC V A +E+ G ++ + +I GFC +G +
Sbjct: 271 ALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVK 330
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ M + PN YN ++ G
Sbjct: 331 VGLHFLKQMENKGYLPNVDTYNILIYG 357
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P+ N++V+G ++ AV M + P + TF AII FC+ G ESA+
Sbjct: 486 PSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKF 545
Query: 193 MRNMVERHCEPNAVVYNAIMD 213
M ++ R C PN Y+ ++D
Sbjct: 546 MEDITARGCVPNTETYSPLID 566
>Medtr5g008255.1 | ATP-binding; nucleic acid-binding; helicase,
putative | LC | chr5:1717378-1718334 | 20130731
Length = 250
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 81 YAAAIS----LIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTA 136
Y A IS L R+ V PDI T I+I C + A S+ + K+G P+T+
Sbjct: 4 YTAVISHAQQLESRSDQIQVFPDIDTWKILITCHSRKCKMASAFSLFYKLIKSGHHPSTS 63
Query: 137 TLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNM 196
TLN + +GL L+ + F + G++ + ++ +I+G CKIG+TE A+ +R
Sbjct: 64 TLNDLFHGLFLQGGMHKVFPFYNDVLLKGFKLDETSYYFLISGLCKIGETEKAIELLR-- 121
Query: 197 VERHCEPNAVVYNAIMDG 214
++ P V Y+ ++ G
Sbjct: 122 --QNITPCVVTYHNLIYG 137
>Medtr1g064380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28325537-28326727 | 20130731
Length = 396
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRA------HSSGVAPDIY 101
+AV +F L+ + + + ++N++ + + R ++ +S ++ H V PDI+
Sbjct: 74 SAVTWFENNLS-DGYASISEYNAVLSSLLRMGYHPTVLSFAQQLEESHNNHLQRVLPDIH 132
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPT-TATLNTIVNGLCLENNVASAVTFTRH 160
T I+I +S + G RPT TLN +++G C+ + + A+ F +
Sbjct: 133 TWTILIKAHAFDGNMFSAMSFFHKIINNGHRPTAEETLNILLHGFCVRHQIHKAMLFYNY 192
Query: 161 M----EN-AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
+ EN AG++ N +++ +I G C+IG+T+SA+ +R ++
Sbjct: 193 IVLKNENGAGFKWNYHSYLILITGLCRIGETQSAIQLLRKALQ 235
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + L ++ + F + + + P V N L +++ + + + G
Sbjct: 199 LIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRLG 258
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT---GLRPTTATLNTIVNGLCLENNVA 152
+ + YT NI+ + LC R V G + K G P T N ++NG C + +
Sbjct: 259 IHRNGYTFNIMTHVLC---REGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLE 315
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A + M G PN ++ A++NG CK G + A MV+R +P+ V YN ++
Sbjct: 316 DAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLI 375
Query: 213 DG 214
G
Sbjct: 376 SG 377
Score = 57.8 bits (138), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN + + R +++ G PD+ T NI+IN C RR + ++
Sbjct: 266 FNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMG 325
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIG 184
G+ P + + ++NGLC E + A M G P+ ++ +I+G+CK G
Sbjct: 326 IRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEG 382
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 58/116 (50%)
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
++ T +I+CLC ++RT+ ++L + G+ P ++NG C EN+V AV+
Sbjct: 509 NLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLL 568
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ ++ AI+ FC++G+ + +V+ PN++ ++ G
Sbjct: 569 KFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRG 624
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVA 152
+G PD T+ ++IN LC + + V + + GL+ N ++ GL V
Sbjct: 174 ENGFEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYVGRVD 233
Query: 153 SAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
AV M+ + Y++ A++NG CK+G ++ A+ V P+ V +NA++
Sbjct: 234 EAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALI 293
Query: 213 DG 214
+G
Sbjct: 294 EG 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+NS+ + A+ F + V+ +N L +A A+ ++ +
Sbjct: 187 LINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYVGRVDEAVEILMDMKTGN 246
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ D+Y+ + V+N LC + R+ + + GLRP T N ++ G E V
Sbjct: 247 IGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGV 306
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMV 197
+ M+ G + + +++G K +T A + MV
Sbjct: 307 GVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMV 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL + + +D AV M N V ++++ + + A+ L A G
Sbjct: 222 LLRGLAYVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVG 281
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N +I R G+ VL ++ + G T+++GL N A
Sbjct: 282 LRPDVVTFNALIEGYSREGREMEGVGVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAF 341
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVL 191
+ M G++ +S G ++ CK+ E +L
Sbjct: 342 GVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKGLL 377
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++++ LD A+A F +ML+ P +N+L ++ ++ A L + SG
Sbjct: 427 MIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSG 486
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P + T NI+IN + R +L + GL P T T+V+ A+
Sbjct: 487 YSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAI 546
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ G++P S + A+IN + + G ++ AV R M P+ + N++++
Sbjct: 547 ECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINA 605
Score = 57.8 bits (138), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ + A G++P TL VI L + RT ++ + + GL P T N ++
Sbjct: 265 AMHFLAVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLK 324
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G ++ A ME +G P+ +T+ +++ + G ESA + ++ M + +P
Sbjct: 325 GYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQP 384
Query: 204 NAVVYNAIM 212
N+ +Y+ I+
Sbjct: 385 NSFIYSRIL 393
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
++A +M A+N P ++ + + + ++K SGV PD + N++
Sbjct: 368 ESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVM 427
Query: 107 I------NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
I NCL H ++ + G+RP T T NT+++ C + A
Sbjct: 428 IDTFGKYNCLDH------AMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEE 481
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+ +GY P T+ +IN E + M + PNAV Y ++D
Sbjct: 482 MQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVD 534
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 65/164 (39%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F +M + PCV +N + + + + L+ + S G+ P+ T +++
Sbjct: 475 AEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVD 534
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
R + L ++ G +PT+ N ++N AV R M G P
Sbjct: 535 IYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTP 594
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ ++IN F + A ++ M E +P+ V Y +M
Sbjct: 595 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 638
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L NS R+++ A A F ++ P + +N+L +T A ++ SG
Sbjct: 291 LGNSGRTIE----AEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSG 346
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD +T +++++ H R VL + + L+P + + I+ + +
Sbjct: 347 VLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSF 406
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ M+ +G QP+ + + +I+ F K + A+ M+ P+ V +N ++D
Sbjct: 407 QVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLID 464
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 82/179 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++++ LD A+A F +ML+ P +N+L ++ ++ A L + SG
Sbjct: 427 MIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSG 486
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+P + T NI+IN + R +L + GL P T T+V+ A+
Sbjct: 487 YSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAI 546
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+++ G++P S + A+IN + + G ++ AV R M P+ + N++++
Sbjct: 547 ECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINA 605
Score = 57.8 bits (138), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ + A G++P TL VI L + RT ++ + + GL P T N ++
Sbjct: 265 AMHFLAVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLK 324
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEP 203
G ++ A ME +G P+ +T+ +++ + G ESA + ++ M + +P
Sbjct: 325 GYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQP 384
Query: 204 NAVVYNAIM 212
N+ +Y+ I+
Sbjct: 385 NSFIYSRIL 393
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
++A +M A+N P ++ + + + ++K SGV PD + N++
Sbjct: 368 ESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVM 427
Query: 107 I------NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
I NCL H ++ + G+RP T T NT+++ C + A
Sbjct: 428 IDTFGKYNCLDH------AMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEE 481
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M+ +GY P T+ +IN E + M + PNAV Y ++D
Sbjct: 482 MQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVD 534
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 65/164 (39%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F +M + PCV +N + + + + L+ + S G+ P+ T +++
Sbjct: 475 AEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVD 534
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
R + L ++ G +PT+ N ++N AV R M G P
Sbjct: 535 IYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTP 594
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ ++IN F + A ++ M E +P+ V Y +M
Sbjct: 595 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 638
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L NS R+++ A A F ++ P + +N+L +T A ++ SG
Sbjct: 291 LGNSGRTIE----AEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSG 346
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD +T +++++ H R VL + + L+P + + I+ + +
Sbjct: 347 VLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSF 406
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ M+ +G QP+ + + +I+ F K + A+ M+ P+ V +N ++D
Sbjct: 407 QVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLID 464
>Medtr4g060570.1 | PPR containing plant-like protein | HC |
chr4:22286659-22289229 | 20130731
Length = 418
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 44 KTLDAAVAFFHQMLAANP----FPCVKDFNSLF-TFVARTKHYAAAISLI---------K 89
K A + F H + NP P ++ +N LF F++R Y I+L+ +
Sbjct: 180 KLTRAVIVFKHMKCSRNPNFGFRPSIRTYNILFGAFLSRG--YNTHINLVYMETMRCLFR 237
Query: 90 RAHSSGVAPDIYTLNIVINCLC---HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC 146
+ + + PDI++LN +I H+ +G+V+ +P + T + +++GLC
Sbjct: 238 QMVNEHIEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYDC--KPNSLTYDYLIHGLC 295
Query: 147 LENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
+ +A M+ G+ P+S ++ +++N +GD E AV + M E+ + +
Sbjct: 296 AKGRTENAKELYHEMKAKGFVPSSKSYNSLVNSLALVGDVEEAVNYLWEMTEKQKSVDFI 355
Query: 207 VYNAIMD 213
Y ++D
Sbjct: 356 TYRTVLD 362
>Medtr7g104640.1 | PPR containing plant-like protein | HC |
chr7:42407659-42406202 | 20130731
Length = 485
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 70/169 (41%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D A F++QM+ P V FN L + R + A+ + G P++ T N
Sbjct: 194 FDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNT 253
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I L R G+ ++ + + G + + T +V+GLC E V+ G
Sbjct: 254 LIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKRG 313
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P Y + ++ C G+ A+ + + + C P+ + ++DG
Sbjct: 314 VLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPSLISCIVMIDG 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 67/173 (38%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
++ K DA AF + P V N L ++ + A + + PD+
Sbjct: 154 KAFKFDDAVYAFNVMRRLIDGKPSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKPDV 213
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
+T NI+I+ C + F L + + K G P T NT++ GL E V +
Sbjct: 214 FTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYE 273
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G Q + T +++G CK G + +R P Y +++
Sbjct: 274 MIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKRGVLPKGYDYFVLVE 326
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 66/174 (37%), Gaps = 14/174 (8%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAH-------SSGVAP 98
L+ A FF +M C D + T V H +KR+ G+ P
Sbjct: 255 LNEAWEFFLEMKKRK---CEIDVVTYTTMV----HGFGVAGEVKRSKRVFDAMVKEGLVP 307
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFT 158
+ T N +I LC L V + G P T N ++ GLC + V F
Sbjct: 308 SVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVIRGLCHSGEIERGVEFM 367
Query: 159 RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ ME G P+ T+ +I +C G+ E + M C PN YN ++
Sbjct: 368 KRMEENGCMPSVQTYNVVIRYYCDEGELEKGLELFEKMGNGTCLPNLDTYNILI 421
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 67/170 (39%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
+K A+ +M+ P + +N+L R A D+ T
Sbjct: 217 IKRTPMALQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVT 276
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+++ V + K GL P+ AT N ++ LC +++V +A+ M
Sbjct: 277 YTTMVHGFGVAGEVKRSKRVFDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMV 336
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G PN T+ +I G C G+ E V M+ M E C P+ YN ++
Sbjct: 337 GKGCVPNLTTYNVVIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVI 386
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 3/165 (1%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ P V +N+L + + A+ + G P++ T N+VI LCH
Sbjct: 297 FDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVIRGLCH 356
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
G+ + + + G P+ T N ++ C E + + M N PN T
Sbjct: 357 SGEIERGVEFMKRMEENGCMPSVQTYNVVIRYYCDEGELEKGLELFEKMGNGTCLPNLDT 416
Query: 173 FGAIINGFCKIGDTESAVLCMR---NMVERHCEPNAVVYNAIMDG 214
+ +I+ +E VL + MV R P +N +++G
Sbjct: 417 YNILISAMFVRKKSEDLVLAGKLLIEMVGRGFLPRKFTFNRVLNG 461
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 1/180 (0%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
H ++ L+ + A A +M A P K F L A A+ + H
Sbjct: 105 HAVDIAARLREYNTAWALMGRMRALRLGPTPKTFAILAERYATGGKAHKAVKVFLSMHEH 164
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G D+ + N +++ LC +R ++ + + + + N + NG CL A
Sbjct: 165 GCHQDLNSFNTILDVLCKTKRVEMANNLFK-TLRGRFKCDSVSYNIMANGWCLIKRTPMA 223
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + M G P T+ ++ G+ + G A M +R CE + V Y ++ G
Sbjct: 224 LQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHG 283
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN++ + +TK A +L K D + NI+ N C ++RT L VL +
Sbjct: 173 FNTILDVLCKTKRVEMANNLFKTLRGR-FKCDSVSYNIMANGWCLIKRTPMALQVLKEMV 231
Query: 128 KTGLRPTTATLNTIVNGL--CLENNVA--------------SAVTFT------------- 158
+ G+ PT T NT++ G C + N A VT+T
Sbjct: 232 ERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 291
Query: 159 ------RHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M G P+ T+ A+I CK ++A+L MV + C PN YN ++
Sbjct: 292 RSKRVFDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVI 351
Query: 213 DG 214
G
Sbjct: 352 RG 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 3/153 (1%)
Query: 45 TLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLN 104
++ A+ F +M+ P + +N + + + + +KR +G P + T N
Sbjct: 324 SVQNALLVFDEMVGKGCVPNLTTYNVVIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYN 383
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTR---HM 161
+VI C GL + + P T N +++ + + V + M
Sbjct: 384 VVIRYYCDEGELEKGLELFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEM 443
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMR 194
G+ P +TF ++NG G+ E A +R
Sbjct: 444 VGRGFLPRKFTFNRVLNGLVLTGNREFANEILR 476
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K ++ A + +M+A P V +++L + I L + + + PD+YT
Sbjct: 64 KLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTF 123
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI ++ C R VL ++ K G++P+ T NT++NG CL + A M
Sbjct: 124 NISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQ 183
Query: 164 AGYQPNSYTFGAIINGF----CK--IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+G IN + C+ I D + + M +R P+ + YN+I+DG
Sbjct: 184 SGVVK---MIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYNSILDG 237
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 37/176 (21%)
Query: 37 LNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
+N +K +D A+ + +M C K+ + T+ SL+ H G
Sbjct: 181 MNQSGVVKMIDEAINLYEEM------HCRKNIPDVVTYS----------SLVDIMHDRGQ 224
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVT 156
PDI T N +++ G+RP T + GLC + A
Sbjct: 225 PPDIITYNSILD---------------------GIRPDMYTYTIFIKGLCQSGKLKDARK 263
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY + YT+ +I GFC G + A+ + M + C P+A +Y ++
Sbjct: 264 VFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGCIPDAKIYEIVI 319
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F M N ++ FN+L + + A +R + G P+ T NI++
Sbjct: 131 AVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMK 190
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
V + + ++P+ + N+++ L + ++ A+ M G +
Sbjct: 191 GWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRA 250
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N T+ ++ G C +G E A M +M R C+P V ++ +M+
Sbjct: 251 NGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMN 295
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A F +ML P V +NSL F++R A+ L++ G + T +
Sbjct: 198 WENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYAL 257
Query: 106 VINCLCHL------RRTAFGLSVLG-------------------------LVF----KTG 130
++ LC L ++ F ++ G ++F K
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
L+P T N VN LC E A A M+ +G +PN+ T+ +++G C+ GD ES +
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 191 LCMRNM-VERHCEPNAVVYNAIMDG 214
+ M RHC P + +N ++ G
Sbjct: 378 SVLNLMFASRHC-PLSDTFNCLVVG 401
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + SL + A M P + +F+ L + + A+ L +
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N+ +N LC +TA +L + +G P AT +++GLC + S +
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M + + P S TF ++ G K G+ + + MV+R + + + A++
Sbjct: 378 SVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVI 434
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F M N ++ FN+L + + A +R + G P+ T NI++
Sbjct: 131 AVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMK 190
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
V + + ++P+ + N+++ L + ++ A+ M G +
Sbjct: 191 GWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRA 250
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N T+ ++ G C +G E A M +M R C+P V ++ +M+
Sbjct: 251 NGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMN 295
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A F +ML P V +NSL F++R A+ L++ G + T +
Sbjct: 198 WENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYAL 257
Query: 106 VINCLCHL------RRTAFGLSVLG-------------------------LVF----KTG 130
++ LC L ++ F ++ G ++F K
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
L+P T N VN LC E A A M+ +G +PN+ T+ +++G C+ GD ES +
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 191 LCMRNM-VERHCEPNAVVYNAIMDG 214
+ M RHC P + +N ++ G
Sbjct: 378 SVLNLMFASRHC-PLSDTFNCLVVG 401
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + SL + A M P + +F+ L + + A+ L +
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N+ +N LC +TA +L + +G P AT +++GLC + S +
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M + + P S TF ++ G K G+ + + MV+R + + + A++
Sbjct: 378 SVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVI 434
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
AV F M N ++ FN+L + + A +R + G P+ T NI++
Sbjct: 131 AVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMK 190
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
V + + ++P+ + N+++ L + ++ A+ M G +
Sbjct: 191 GWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRA 250
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
N T+ ++ G C +G E A M +M R C+P V ++ +M+
Sbjct: 251 NGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMN 295
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+ A F +ML P V +NSL F++R A+ L++ G + T +
Sbjct: 198 WENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYAL 257
Query: 106 VINCLCHL------RRTAFGLSVLG-------------------------LVF----KTG 130
++ LC L ++ F ++ G ++F K
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 131 LRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
L+P T N VN LC E A A M+ +G +PN+ T+ +++G C+ GD ES +
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 191 LCMRNM-VERHCEPNAVVYNAIMDG 214
+ M RHC P + +N ++ G
Sbjct: 378 SVLNLMFASRHC-PLSDTFNCLVVG 401
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ + SL + A M P + +F+ L + + A+ L +
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ T N+ +N LC +TA +L + +G P AT +++GLC + S +
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M + + P S TF ++ G K G+ + + MV+R + + + A++
Sbjct: 378 SVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVI 434
>Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:6327520-6326399 | 20130731
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 40 IRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHS------ 93
I S K+ AV+ F L+ +P + +N + + + + +SL ++
Sbjct: 38 IESCKSWPTAVSLFESTLSVGCYP-ISHYNFILSSLLQLGRSETVVSLAQQLEEVKYRNN 96
Query: 94 --SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
V PDI+T +I+I C C + + + + KTG P++ TL I +G C +
Sbjct: 97 IYKRVLPDIHTWSILITCHCFHGNMSSAICLFNNIIKTGHPPSSETLYDIFDGFCRIGKI 156
Query: 152 ASAVTFTRHME-NAGYQPNSYTFGAIINGFCKI-GDTESAVLCMRNMVE 198
A+ F + G+Q ++ T+ +I G C+I G+T+ A+ +R ++
Sbjct: 157 HKAILFYNDIVLKQGFQLDNRTYSILIQGVCEIGGETQIAIQLLRQALQ 205
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAAN-PFPCVKDFNSLFTFVARTKHYAAAISLIKRAH-S 93
++N + D A+ + ML P V F +L + + + A+ L R
Sbjct: 401 VINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPE 460
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G+ P + T N++I CL L+R V + G+ P + T IV GLC + +
Sbjct: 461 NGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQIEE 520
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
A +F + + +++ + AI+ G C G A + +V+ PN YN +++
Sbjct: 521 AKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNILIN 580
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 93 SSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLV-----FKTGLRPTTATLNTIVNGLCL 147
SSG PD T N++ L L R+ LV K G P+ N +++ C
Sbjct: 66 SSGSIPDHRTCNLL---LAKLLRSKTPFQTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCF 122
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVV 207
+ A M+N G+ PN ++ +ING+C +G A+ M+E EPN++
Sbjct: 123 IHRPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMT 182
Query: 208 YNAIMDG 214
Y+ ++ G
Sbjct: 183 YSVLIRG 189
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 3/178 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPF-PCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L++ + + +D A+ F++++ N P V +N L + + K A +
Sbjct: 437 LISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGD 496
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
G+ PD T +++ LC + S +++ +G+ I+ GLC
Sbjct: 497 GITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIH-DNFVYAAILKGLCSSGKFNE 555
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
A F + ++G PN Y++ +IN C +G +R M + P+ V + +
Sbjct: 556 ACHFLYELVDSGISPNIYSYNILINCACNLGLKREVYQIVREMNKNGVAPDCVTWRIL 613
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKR--AHS 93
+L+++ + + A F L++ P + N L + R+K SL+K
Sbjct: 44 ILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSKTPFQTWSLVKSLIQIK 103
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+G P + N +++ C + R + + G P + T++NG C +
Sbjct: 104 AGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIRD 163
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
A+ M +G +PNS T+ +I GF + D ES M + ER
Sbjct: 164 AMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWER 209
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVT- 156
D+ TLN VIN C + R L VL ++ P T T+++GL V A+
Sbjct: 394 DVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDL 453
Query: 157 FTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F R M G +P T+ +I K+ A NM P++ Y I++G
Sbjct: 454 FNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEG 511
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ F +M V +N+L + ++K S+G+AP+ T N+
Sbjct: 286 IEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNV 345
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ L T SV + K P T ++ C N V A+ ++M++
Sbjct: 346 IMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQ 404
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ P+ +TF +ING C G+ A + + M+E+ P+ + + +
Sbjct: 405 FVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKL 450
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K ++ L + + A + S+G PDI T I+++ LC R + V
Sbjct: 198 PDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEV 257
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + RPT+ + +V+ +E+ + A+ ME G + + A+I FCK
Sbjct: 258 VKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCK 317
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ ++ M PN+ N IM
Sbjct: 318 ANKLKNVHRVLKEMESNGIAPNSRTCNVIM 347
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 85 ISLIKRAHSSGVAPDIYTLNI---------------VINCLCHLRRTAFGLSVLGLVFKT 129
I + K A + V +YT N+ +++ LC R + K
Sbjct: 136 IIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFD-SMKG 194
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
P + T + ++ G E N+ A M +AG P+ T+G +++ CK G + A
Sbjct: 195 RFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEA 254
Query: 190 VLCMRNMVERHCEPNAVVYNAIM 212
V ++ M + C P + +Y+ ++
Sbjct: 255 VEVVKEMDDNDCRPTSFIYSVLV 277
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ F +M V +N+L + ++K S+G+AP+ T N+
Sbjct: 286 IEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNV 345
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ L T SV + K P T ++ C N V A+ ++M++
Sbjct: 346 IMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQ 404
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ P+ +TF +ING C G+ A + + M+E+ P+ + + +
Sbjct: 405 FVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKL 450
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K ++ L + + A + S+G PDI T I+++ LC R + V
Sbjct: 198 PDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEV 257
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + RPT+ + +V+ +E+ + A+ ME G + + A+I FCK
Sbjct: 258 VKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCK 317
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ ++ M PN+ N IM
Sbjct: 318 ANKLKNVHRVLKEMESNGIAPNSRTCNVIM 347
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 85 ISLIKRAHSSGVAPDIYTLNI---------------VINCLCHLRRTAFGLSVLGLVFKT 129
I + K A + V +YT N+ +++ LC R + K
Sbjct: 136 IIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFD-SMKG 194
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
P + T + ++ G E N+ A M +AG P+ T+G +++ CK G + A
Sbjct: 195 RFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEA 254
Query: 190 VLCMRNMVERHCEPNAVVYNAIM 212
V ++ M + C P + +Y+ ++
Sbjct: 255 VEVVKEMDDNDCRPTSFIYSVLV 277
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ F +M V +N+L + ++K S+G+AP+ T N+
Sbjct: 286 IEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNV 345
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ L T SV + K P T ++ C N V A+ ++M++
Sbjct: 346 IMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQ 404
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ P+ +TF +ING C G+ A + + M+E+ P+ + + +
Sbjct: 405 FVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKL 450
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K ++ L + + A + S+G PDI T I+++ LC R + V
Sbjct: 198 PDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEV 257
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + RPT+ + +V+ +E+ + A+ ME G + + A+I FCK
Sbjct: 258 VKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCK 317
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ ++ M PN+ N IM
Sbjct: 318 ANKLKNVHRVLKEMESNGIAPNSRTCNVIM 347
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 85 ISLIKRAHSSGVAPDIYTLNI---------------VINCLCHLRRTAFGLSVLGLVFKT 129
I + K A + V +YT N+ +++ LC R + K
Sbjct: 136 IIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFD-SMKG 194
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
P + T + ++ G E N+ A M +AG P+ T+G +++ CK G + A
Sbjct: 195 RFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEA 254
Query: 190 VLCMRNMVERHCEPNAVVYNAIM 212
V ++ M + C P + +Y+ ++
Sbjct: 255 VEVVKEMDDNDCRPTSFIYSVLV 277
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
++ A+ F +M V +N+L + ++K S+G+AP+ T N+
Sbjct: 286 IEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNV 345
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+++ L T SV + K P T ++ C N V A+ ++M++
Sbjct: 346 IMSSLISQGETDKAFSVFRRMIKL-CEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQ 404
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+ P+ +TF +ING C G+ A + + M+E+ P+ + + +
Sbjct: 405 FVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKL 450
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P K ++ L + + A + S+G PDI T I+++ LC R + V
Sbjct: 198 PDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEV 257
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + RPT+ + +V+ +E+ + A+ ME G + + A+I FCK
Sbjct: 258 VKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCK 317
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
++ ++ M PN+ N IM
Sbjct: 318 ANKLKNVHRVLKEMESNGIAPNSRTCNVIM 347
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 85 ISLIKRAHSSGVAPDIYTLNI---------------VINCLCHLRRTAFGLSVLGLVFKT 129
I + K A + V +YT N+ +++ LC R + K
Sbjct: 136 IIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFD-SMKG 194
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
P + T + ++ G E N+ A M +AG P+ T+G +++ CK G + A
Sbjct: 195 RFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEA 254
Query: 190 VLCMRNMVERHCEPNAVVYNAIM 212
V ++ M + C P + +Y+ ++
Sbjct: 255 VEVVKEMDDNDCRPTSFIYSVLV 277
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L ++ + A+ L +R G+ PD T + ++N LC R LS
Sbjct: 355 YTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCN 414
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G+ +++++GL V A M G P+SY + A+I+G CK G +
Sbjct: 415 ENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRID 474
Query: 188 SAVLCMRNMVERHCE 202
A+ ++ M CE
Sbjct: 475 DALALVKRMERDGCE 489
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 67/161 (41%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ M N P + +NSL + + +A + PD+ T N +I C
Sbjct: 200 WRGMNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCK 259
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+T + ++ + L P + T++ E +V ++ ME+ G++ S+
Sbjct: 260 AGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHG 319
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ +I G CK+G NM+ C+ N VY A++D
Sbjct: 320 YSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALID 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G+ P T + IVNGLC V A+++ + G N+ + ++I+G K G + A
Sbjct: 382 GIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEA 441
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M E+ C P++ YNA++DG
Sbjct: 442 EKVFDEMAEKGCPPDSYCYNALIDG 466
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 1/167 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + +D A F +M P +N+L + + A++L+KR G
Sbjct: 428 LIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDG 487
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+YT I+I+ L + R + + L+ G+ P A + GLCL VA A
Sbjct: 488 CEQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARAC 547
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+ G + + +I CK G + A +V+R E
Sbjct: 548 KVLDELAPMGVVLET-AYEDMIGALCKAGRVKEACKLADGIVDRGRE 593
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +M N P V + ++ +SL G + ++VI
Sbjct: 266 AIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSLVIC 325
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC + + G ++ + + G + A +++ N A+ M+ G +P
Sbjct: 326 GLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEP 385
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ AI+NG CK G E A+ + E NAV Y++++DG
Sbjct: 386 DEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDG 431
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 71/168 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ F +M P ++++ + ++ A+S + + +GV + + +
Sbjct: 369 DGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSL 428
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ L R V + + G P + N +++GLC + A+ + ME G
Sbjct: 429 IDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGC 488
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ YTF +I+ ++ E AV M+++ PN + A+ G
Sbjct: 489 EQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIG 536
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + +++A F M P V +N++ + AI +++
Sbjct: 218 LLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVIN 277
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ + V+ F LS+ + G + + ++ GLC V
Sbjct: 278 LEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGY 337
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+M G + N + A+I+ + K G+++ A+ M EP+ V Y+AI++G
Sbjct: 338 ALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNG 396
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+ +L ++ + A+ L +R G+ PD T + ++N LC R LS
Sbjct: 355 YTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCN 414
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ G+ +++++GL V A M G P+SY + A+I+G CK G +
Sbjct: 415 ENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRID 474
Query: 188 SAVLCMRNMVERHCE 202
A+ ++ M CE
Sbjct: 475 DALALVKRMERDGCE 489
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 67/161 (41%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ M N P + +NSL + + +A + PD+ T N +I C
Sbjct: 200 WRGMNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCK 259
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+T + ++ + L P + T++ E +V ++ ME+ G++ S+
Sbjct: 260 AGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHG 319
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
+ +I G CK+G NM+ C+ N VY A++D
Sbjct: 320 YSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALID 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G+ P T + IVNGLC V A+++ + G N+ + ++I+G K G + A
Sbjct: 382 GIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEA 441
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
M E+ C P++ YNA++DG
Sbjct: 442 EKVFDEMAEKGCPPDSYCYNALIDG 466
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 1/167 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L++ + +D A F +M P +N+L + + A++L+KR G
Sbjct: 428 LIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDG 487
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+YT I+I+ L + R + + L+ G+ P A + GLCL VA A
Sbjct: 488 CEQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARAC 547
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCE 202
+ G + + +I CK G + A +V+R E
Sbjct: 548 KVLDELAPMGVVLET-AYEDMIGALCKAGRVKEACKLADGIVDRGRE 593
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ +M N P V + ++ +SL G + ++VI
Sbjct: 266 AIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSLVIC 325
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
LC + + G ++ + + G + A +++ N A+ M+ G +P
Sbjct: 326 GLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEP 385
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ T+ AI+NG CK G E A+ + E NAV Y++++DG
Sbjct: 386 DEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDG 431
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 71/168 (42%)
Query: 47 DAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIV 106
D A+ F +M P ++++ + ++ A+S + + +GV + + +
Sbjct: 369 DGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSL 428
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
I+ L R V + + G P + N +++GLC + A+ + ME G
Sbjct: 429 IDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGC 488
Query: 167 QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ YTF +I+ ++ E AV M+++ PN + A+ G
Sbjct: 489 EQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIG 536
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LLN + +++A F M P V +N++ + AI +++
Sbjct: 218 LLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVIN 277
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD+ + V+ F LS+ + G + + ++ GLC V
Sbjct: 278 LEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGY 337
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+M G + N + A+I+ + K G+++ A+ M EP+ V Y+AI++G
Sbjct: 338 ALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNG 396
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 63.9 bits (154), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 1/167 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ F +M P ++ + L + + A+ + + +G+ PD+Y +IV+N
Sbjct: 175 ALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVN 234
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + R + VL + K GL P T N +VNG + R M G
Sbjct: 235 AHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSR 294
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERH-CEPNAVVYNAIMDG 214
N T ++ G+CK G + A +R + E + VY ++DG
Sbjct: 295 NVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDG 341
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
NI I+ LC + SVL ++ G P T T+++ + NV A M
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G PN + A+ING CK+G+ + A + ++ PNAV YN ++
Sbjct: 781 KGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILI 829
Score = 58.2 bits (139), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A +ML P V +N++ + Y A+ L GV P+ + +++
Sbjct: 421 AFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLD 480
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
C + + + + + G +T NT+++GLC + A M+ G P
Sbjct: 481 CFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV-VYNAIMDG 214
+ T+ + +G+CK G+ + A ++ ++ER ++ +YN+++DG
Sbjct: 541 DEITYRTLSDGYCKNGNVQEA-FQIKGVMERQAMSASIEMYNSLIDG 586
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 73/177 (41%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
+L+ + D A+ + ++L FN++ + + + A ++ R G
Sbjct: 478 MLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELG 537
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD T + + C + G++ + + + N++++GL +
Sbjct: 538 LSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVT 597
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M+ G PN T+G +I+G+C + A M+ER PN VV + I+
Sbjct: 598 DLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIV 654
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 57/119 (47%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PD Y+ N +++ C + + + + G+ PT T NT++ GL + A+
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M G PN + +++ F K+GD++ A++ + ++ R + V +N ++ G
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISG 516
Score = 51.6 bits (122), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ ++ N +I C L + V + L+P + NT+++G C E V+ A
Sbjct: 362 GLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
M G P T+ +I G +G + A+ MVER PN + ++D
Sbjct: 422 FMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLD 480
Score = 51.6 bits (122), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 49/110 (44%)
Query: 105 IVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
++++ C + R + + + + GL+ NT++ G C V A M +
Sbjct: 337 VLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDW 396
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+P+ Y++ +++G+C+ G A + M+ P V YN ++ G
Sbjct: 397 NLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKG 446
Score = 51.2 bits (121), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 65/162 (40%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
F M+ N P +N+L R + A L + G+ P + T N VI L
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ L + L+ + G+ P + T+++ + A+ + + G+ ++
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVA 509
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
F +I+G CK+G A M E P+ + Y + DG
Sbjct: 510 FNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDG 551
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 56/151 (37%)
Query: 64 CVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVL 123
C F+ L A A+ + G P + + + ++ L + V
Sbjct: 155 CSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVF 214
Query: 124 GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
+ TG+ P + +VN C V A+ M G +PN T+ ++NG+
Sbjct: 215 DQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGR 274
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GD E +R M ER N V +M G
Sbjct: 275 GDFEGVERVLRLMSERGVSRNVVTCTMLMRG 305
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 48/115 (41%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A S++ S G PD +T +I+ + + + GL P N ++N
Sbjct: 736 ARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALIN 795
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
GLC N+ A + G PN+ T+ +I +C+IGD + A M E
Sbjct: 796 GLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTE 850
Score = 48.1 bits (113), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 63/174 (36%), Gaps = 8/174 (4%)
Query: 45 TLDAAVAFFHQML----AANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
+ D A+ +H M+ N C + F + A+ L K G
Sbjct: 452 SYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDR----AMMLWKEILGRGFTKST 507
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
N +I+ LC + + +V + + GL P T T+ +G C NV A
Sbjct: 508 VAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGV 567
Query: 161 MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
ME + + ++I+G KI + M R PN V Y ++ G
Sbjct: 568 MERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621
>Medtr4g094245.2 | PPR containing plant-like protein | HC |
chr4:37513939-37510767 | 20130731
Length = 456
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S + +D +V F++ N ++ +NSL + +K + AA +LI+R G
Sbjct: 148 LIESYGRHRHIDQSVQLFNKCKIFNCPQNLQLYNSLLFALCESKLFHAAYALIRRMLRKG 207
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD +T +++N C + L + G P + ++ GL + SA
Sbjct: 208 ISPDKHTYALLVNAWCSSGKMREAQQFLKEMSDKGFTPPVRGRDLLIEGLLNAGYIESAK 267
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
R M G P+ TF A++ CK G+ E
Sbjct: 268 GMVRKMVKEGIIPDVGTFNALMESICKCGEDE 299
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
+SL R +H ++ L + ++ N ++ LC + +++ + +
Sbjct: 146 SSLIESYGRHRHIDQSVQLFNKCKIFNCPQNLQLYNSLLFALCESKLFHAAYALIRRMLR 205
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
G+ P T +VN C + A F + M + G+ P +I G G ES
Sbjct: 206 KGISPDKHTYALLVNAWCSSGKMREAQQFLKEMSDKGFTPPVRGRDLLIEGLLNAGYIES 265
Query: 189 AVLCMRNMVERHCEPNAVVYNAIMD 213
A +R MV+ P+ +NA+M+
Sbjct: 266 AKGMVRKMVKEGIIPDVGTFNALME 290
>Medtr4g094245.1 | PPR containing plant-like protein | HC |
chr4:37513947-37510767 | 20130731
Length = 456
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S + +D +V F++ N ++ +NSL + +K + AA +LI+R G
Sbjct: 148 LIESYGRHRHIDQSVQLFNKCKIFNCPQNLQLYNSLLFALCESKLFHAAYALIRRMLRKG 207
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
++PD +T +++N C + L + G P + ++ GL + SA
Sbjct: 208 ISPDKHTYALLVNAWCSSGKMREAQQFLKEMSDKGFTPPVRGRDLLIEGLLNAGYIESAK 267
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
R M G P+ TF A++ CK G+ E
Sbjct: 268 GMVRKMVKEGIIPDVGTFNALMESICKCGEDE 299
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%)
Query: 69 NSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFK 128
+SL R +H ++ L + ++ N ++ LC + +++ + +
Sbjct: 146 SSLIESYGRHRHIDQSVQLFNKCKIFNCPQNLQLYNSLLFALCESKLFHAAYALIRRMLR 205
Query: 129 TGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTES 188
G+ P T +VN C + A F + M + G+ P +I G G ES
Sbjct: 206 KGISPDKHTYALLVNAWCSSGKMREAQQFLKEMSDKGFTPPVRGRDLLIEGLLNAGYIES 265
Query: 189 AVLCMRNMVERHCEPNAVVYNAIMD 213
A +R MV+ P+ +NA+M+
Sbjct: 266 AKGMVRKMVKEGIIPDVGTFNALME 290
>Medtr1g114300.1 | PPR containing plant-like protein | HC |
chr1:51588477-51583476 | 20130731
Length = 553
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+NSL +F K + ++RA + PD+ + ++IN RR L+V +
Sbjct: 286 YNSLMSFETNYKEVSNIYDQMQRAD---LRPDVVSYALLINAYGKARREEEALAVFEEML 342
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+RPT N +++ + V A + M Y P+ ++ +++ + D E
Sbjct: 343 DAGVRPTRKAYNILLDAFSISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDME 402
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A + +++ EPN V Y ++ G
Sbjct: 403 GAEKFFKRLIQDGFEPNVVTYGTLIKG 429
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 38 NSIRSLKTLDAAVA-FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGV 96
NS+ S +T V+ + QM A+ P V + L + + A+++ + +GV
Sbjct: 287 NSLMSFETNYKEVSNIYDQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 346
Query: 97 APDIYTLNIVINCLCHLRRTAFGLSVL----GLVFKTGLR----PTTATLNTIVNGLCLE 148
P NI+++ AF +S + +VFK+ R P + T+++
Sbjct: 347 RPTRKAYNILLD--------AFSISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNA 398
Query: 149 NNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
++ A F + + G++PN T+G +I G+ K D E + M+ R + N +
Sbjct: 399 PDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLGRGIKANQTIL 458
Query: 209 NAIMD 213
IMD
Sbjct: 459 TTIMD 463
>Medtr1g054655.1 | PPR superfamily protein | LC |
chr1:23786289-23787419 | 20130731
Length = 376
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 47 DAAVAFFHQMLAANPFPCVKD-FNSLFTFVARTKHYAAAISLIKRAHSS------GVAPD 99
D AV FF ML+ CV +N + + +A+ + L+K V PD
Sbjct: 69 DEAVKFFKNMLSMGV--CVISLYNHVLSKLAKMHSFDTIFILVKELDDELSKFDGPVRPD 126
Query: 100 IYTLNIVINCLCHLRR--TAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
T +I CH R + L + + +G PT TLN ++ G CL + + A+ F
Sbjct: 127 PDTHTFIILIQCHSLRGNMSSALYLFNKIIDSGHYPTAETLNALLEGFCLRSQIDKAMPF 186
Query: 158 TRH-MENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRN--MVERHCEPNAV----VYNA 210
+ GY + ++ +++G C+IG+T+ A+ +R ++ER E V YN+
Sbjct: 187 YNDIILKKGYPLDHRSYNILVDGLCEIGETQLAINMLRQALLIEREPEDTCVSLTSCYNS 246
Query: 211 IM 212
I+
Sbjct: 247 II 248
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V + +L A+ L K+ S + P++YT N +++ C + +V
Sbjct: 29 PNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNV 88
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
L + + L+ ++++NG CL N V A + + M + ++ +IN FCK
Sbjct: 89 LNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCK 148
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ + A+ M + P+ V Y+ ++DG
Sbjct: 149 MKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDG 180
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G+ P T +++G C+ + A+ + M + PN YTF +++ FCK G E A
Sbjct: 26 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 85
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
+ M+E+ + + V Y+++M+G
Sbjct: 86 KNVLNTMMEKDLKSDVVAYSSLMNG 110
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L+ A+ F +M++ N P V FN L + A +++ + D+ +
Sbjct: 47 LEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSS 106
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++N C + S+ + + L + N ++N C V A+ M
Sbjct: 107 LMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQ 166
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMD 213
P+ T+ +I+G CK G A+ + M +R PN + Y I+D
Sbjct: 167 IFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVD 214
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
F + ++ + ++++ + PD N+VI +C G ++ +
Sbjct: 108 FREVLKLCKEAENVDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMS 167
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
G+ P T T++ GLC + A + M G PNS A+++G C++ E
Sbjct: 168 LNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSME 227
Query: 188 SAVLCMRNMVER-HCEPNAVVYNAIM 212
A+ + M + C PN V Y +++
Sbjct: 228 RALELLDEMEKSGDCCPNVVTYTSLI 253
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
+L + + +D + +M P +N + V + L+K +
Sbjct: 110 EVLKLCKEAENVDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMSLN 169
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ PD+ T +I LC R ++ ++ G P + L+ +++GLC +++ A
Sbjct: 170 GICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERA 229
Query: 155 VTFTRHMENAGYQ-PNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
+ ME +G PN T+ ++I FCK G+ A+ N+++R
Sbjct: 230 LELLDEMEKSGDCCPNVVTYTSLIQSFCKRGEWTEAL----NILDR 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 86 SLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGL 145
+IK G ++ V+ GL VL + ++P T N ++ +
Sbjct: 91 DVIKAYEVDGCVVNVNMFREVLKLCKEAENVDLGLWVLRKMEDFEMKPDTVMYNVVIKLV 150
Query: 146 CLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNA 205
C + +V + M G P+ T+ +I G C G E A ++ M C PN+
Sbjct: 151 CKQGDVEMGEKLMKDMSLNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNS 210
Query: 206 VVYNAIMDG 214
VV +A++DG
Sbjct: 211 VVLSAVLDG 219
>Medtr4g104790.1 | PPR containing plant protein | LC |
chr4:43421559-43424066 | 20130731
Length = 628
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAI--SLIKRAHSSGVAPDIY 101
+ + AV + M+ + P V D L +A + + + + K+ S+G
Sbjct: 312 QMMKDAVKLYELMMDGSYEPSVHDCCFLLNAIATSDSPNSDLVFRVAKKYESAGYTLTKE 371
Query: 102 TLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHM 161
+ + CL + + +++ + G P T + +V GLC V A M
Sbjct: 372 IYDGIHRCLTSVGKFDKAENIVKTMRNGGHEPDNTTYSQLVFGLCKMKRVEEACKVLEEM 431
Query: 162 ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
E++G P++ T+ I G C + A+LC+ M+E+ C P+A +A++D
Sbjct: 432 ESSGCIPDNKTWSIFIQGHCAANALDKALLCLSKMIEKDCNPDAAAIDALVDS 484
>Medtr3g086470.1 | proton gradient regulation protein, putative | LC
| chr3:39190426-39190070 | 20130731
Length = 118
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 77 RTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTA 136
++ + AISL K+ + +GV PD+ T+NI+IN L + +LG GL P
Sbjct: 2 KSHQHNVAISLFKKLNVAGVRPDVITMNIIINSLVQVANLKMAKCILGKSVILGLEPDVW 61
Query: 137 TLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
T T+ G +V A+ + ++G+ N T+G +I G C+ T +A+
Sbjct: 62 TFATLFRGY----SVVGAMELHHKLVDSGFVLNQVTYGTLIEGLCRREGTNAAI 111
>Medtr3g091460.1 | PPR containing plant-like protein | HC |
chr3:41616039-41619290 | 20130731
Length = 631
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 68 FNSLFTFVARTKHYAAAISLIKR---AHS--SGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
+NS+ +A+ + A+ L R H+ + +A ++ + N++++ C + + V
Sbjct: 316 YNSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKFKEAIEV 375
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ ++ +P T + N ++ LC + A ME G P+ YT+G +++ K
Sbjct: 376 FRSMGESRCKPDTLSFNNLIEQLCNNGMILEAEEVYGEMEGKGVNPDEYTYGLLMDTCFK 435
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ A + MVE PN VYN ++DG
Sbjct: 436 ENRPDDAASYFKKMVESGLRPNLAVYNRLVDG 467
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 3/172 (1%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
LD A + + +N P + N++ + R Y+ +SL + +GV P+I T N+
Sbjct: 116 LDEAALYTRHSIYSNCRPTIFTINAVLFALFRQSRYSDLLSLHRFITQAGVVPNIITYNL 175
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTG-LRPTTATLNTIVNGLCLENNVASAVTFTRHMENA 164
+ R+ L K P+ T ++ GL N + A+ M +
Sbjct: 176 IFQTYLDCRKPDTALENFKQFIKDAPFNPSPTTFRILIKGLVDNNRLDRAMDIKDQMNAS 235
Query: 165 GYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVER--HCEPNAVVYNAIMDG 214
G+ P+ + ++ G + D + + + E+ + VV +M G
Sbjct: 236 GFAPDPLVYHYLMLGHARSSDGDGVLRVYEELKEKLGGVVEDGVVLGCLMKG 287
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 68/171 (39%), Gaps = 1/171 (0%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K D +M + C+ + + A+ + + A+ + GV D L
Sbjct: 182 KEFDLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAAL 241
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +++ L + +VL FK+ + ++ + N ++NG C N A +
Sbjct: 242 NKLLDALVKGQSIEIAHNVLD-EFKSSVPLSSPSFNILINGWCKVRNFEKARKVMEERKE 300
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
G++P+ +T+ I +C D + M C PNAV Y ++ G
Sbjct: 301 HGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLG 351
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 61.6 bits (148), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
D V FF +MLA P +NSL + A + A L+ G+ D +T N
Sbjct: 265 FDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNT 324
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
++ LC + VL + + PT T +T+++G N + A+ M+
Sbjct: 325 YLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRS 384
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++ ++ + K+G + A+ + M + + V YNA++ G
Sbjct: 385 ISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSG 433
Score = 47.8 bits (112), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 66/147 (44%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N++ A+ + AI K S G+ D+ T N +++ + +
Sbjct: 392 YNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMK 451
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ P T T +T+++ A+ + + A + + + +II+ CK G E
Sbjct: 452 AWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVE 511
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
S+++ + M+E+ +PN V +N+I+D
Sbjct: 512 SSIMLLIAMIEKGIKPNVVTFNSIIDA 538
>Medtr4g068800.4 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN+ ++ + G P+ Y+ +++I C R +
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K + + NTI+ G C +V A F R M G T+ ++ G+C
Sbjct: 302 WEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCG 361
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
I D ESAVL ++M+ + P+A + ++
Sbjct: 362 IEDVESAVLVYKDMLRKDFRPDASTLDMVV 391
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 1/151 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F+ +M V + L + +A+ + K PD TL++V+
Sbjct: 333 AEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVR 392
Query: 109 CLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
LC+ R + L V K L P + ++ G C E + A+ M G+Q
Sbjct: 393 LLCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQ 452
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
NS + I+G+ + G E A + M++
Sbjct: 453 LNSEIYEVFIDGYVRQGSEEMAEALRKEMLQ 483
>Medtr4g068800.3 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN+ ++ + G P+ Y+ +++I C R +
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K + + NTI+ G C +V A F R M G T+ ++ G+C
Sbjct: 302 WEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCG 361
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
I D ESAVL ++M+ + P+A + ++
Sbjct: 362 IEDVESAVLVYKDMLRKDFRPDASTLDMVV 391
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 1/151 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F+ +M V + L + +A+ + K PD TL++V+
Sbjct: 333 AEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVR 392
Query: 109 CLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
LC+ R + L V K L P + ++ G C E + A+ M G+Q
Sbjct: 393 LLCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQ 452
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
NS + I+G+ + G E A + M++
Sbjct: 453 LNSEIYEVFIDGYVRQGSEEMAEALRKEMLQ 483
>Medtr4g068800.5 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN+ ++ + G P+ Y+ +++I C R +
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K + + NTI+ G C +V A F R M G T+ ++ G+C
Sbjct: 302 WEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCG 361
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
I D ESAVL ++M+ + P+A + ++
Sbjct: 362 IEDVESAVLVYKDMLRKDFRPDASTLDMVV 391
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 1/151 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F+ +M V + L + +A+ + K PD TL++V+
Sbjct: 333 AEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVR 392
Query: 109 CLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
LC+ R + L V K L P + ++ G C E + A+ M G+Q
Sbjct: 393 LLCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQ 452
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
NS + I+G+ + G E A + M++
Sbjct: 453 LNSEIYEVFIDGYVRQGSEEMAEALRKEMLQ 483
>Medtr4g068800.2 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN+ ++ + G P+ Y+ +++I C R +
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K + + NTI+ G C +V A F R M G T+ ++ G+C
Sbjct: 302 WEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCG 361
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
I D ESAVL ++M+ + P+A + ++
Sbjct: 362 IEDVESAVLVYKDMLRKDFRPDASTLDMVV 391
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 1/151 (0%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A F+ +M V + L + +A+ + K PD TL++V+
Sbjct: 333 AEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDMVVR 392
Query: 109 CLCHLRRTAFGLSVL-GLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
LC+ R + L V K L P + ++ G C E + A+ M G+Q
Sbjct: 393 LLCYKGRVEEAMKFLRSGVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLGKGFQ 452
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
NS + I+G+ + G E A + M++
Sbjct: 453 LNSEIYEVFIDGYVRQGSEEMAEALRKEMLQ 483
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 60.8 bits (146), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ ML A P +N+L + ++ A+++ K+ +GV PD+ T NI++
Sbjct: 204 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLT 263
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ- 167
+ + LS L+ T +RP T T N I++ L AV M+ +
Sbjct: 264 AFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSEC 323
Query: 168 -PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ TF ++I+ + G E+ M+ +PN V YNA++
Sbjct: 324 HPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALL 369
>Medtr1g054690.1 | hypothetical protein | LC |
chr1:23824181-23823561 | 20130731
Length = 206
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVART--KHYAAAISLIKRAHSSGVAPDIYTLNIV 106
A+A F ML +P P +FN L + +A+T K + G++ D+ + NI+
Sbjct: 45 AIAVFEGMLIEDPTPPTHEFNHLLSSIAKTFPKTNGVVVDSYTEMLKMGISLDLVSYNIL 104
Query: 107 INCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGY 166
+ C + + LS+ G VFK G + T TLNT++ L V A+ F + G
Sbjct: 105 MKCYADAKLMGYSLSLFGKVFKLGFQSTGFTLNTLLKPLFSSGKVVEAIQFYNSSDFYGI 164
Query: 167 QPNSYTFGAIING 179
S + I G
Sbjct: 165 SSLSDQYWDIGEG 177
>Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29889526-29890146 | 20130731
Length = 188
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 18/177 (10%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
++N +K +D A+ F +M N P V +NSL ++++ + + L+ + H G
Sbjct: 15 MINGFCKIKKVDEAMNLFKEMHCKNIIPNVVTYNSLIDGLSKSGIISYVLQLVDQMHDRG 74
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+I T N +++ LC + ++ T + + L A
Sbjct: 75 VPPNIVTYNSILDALCKTHQVDKTIA-----LSTKFKDQSGRL-------------KDAR 116
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ GY T+ +I GFC G + ++ + M E C NAV Y I+
Sbjct: 117 NIFEDLLVKGYNVTVNTYTVMIQGFCSHGLFDESLALLSKMEENGCISNAVTYEIII 173
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 139 NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
NT++NG C V A+ + M PN T+ ++I+G K G + + M +
Sbjct: 13 NTMINGFCKIKKVDEAMNLFKEMHCKNIIPNVVTYNSLIDGLSKSGIISYVLQLVDQMHD 72
Query: 199 RHCEPNAVVYNAIMD 213
R PN V YN+I+D
Sbjct: 73 RGVPPNIVTYNSILD 87
>Medtr4g068800.1 | PPR containing plant-like protein | HC |
chr4:25806656-25804340 | 20130731
Length = 611
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN+ ++ + G P+ Y+ +++I C R +
Sbjct: 242 PNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K + + NTI+ G C +V A F R M G T+ ++ G+C
Sbjct: 302 WEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCG 361
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
I D ESAVL ++M+ + P+A + ++
Sbjct: 362 IEDVESAVLVYKDMLRKDFRPDASTLDMVV 391
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
L L+ FH+M P +N + + R A+ L+ G+ P +
Sbjct: 324 LGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVH 383
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+I+ L + + + G+ P ++ G + A M
Sbjct: 384 FTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMI 443
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G PN +T+ ++I GFC G + A ++ M + C PN VVY+ ++
Sbjct: 444 SRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLV 493
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 55/152 (36%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AV + M P V F +L ++R+ H + G+ PD+ ++I
Sbjct: 364 KAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMI 423
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+ + G P T N+++ G C+ A + + ME G
Sbjct: 424 TGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCS 483
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
PN + ++ K G A +R M+E+
Sbjct: 484 PNFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 515
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ ML A P +N+L + ++ A+++ K+ +GV PD+ T NI++
Sbjct: 65 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLT 124
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ- 167
+ + LS L+ T +RP T T N I++ L AV M+ +
Sbjct: 125 AFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSEC 184
Query: 168 -PNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
P+ TF ++I+ + G E+ M+ +PN V YNA++
Sbjct: 185 HPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALL 230
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+++ ++ A + F M P VK F SL + A ++ + +G
Sbjct: 225 LLDALCKNGSVKEAASLFEDMRYKFT-PTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAG 283
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
+ PDI N ++ + +L + + G P A+ ++ LC + A+
Sbjct: 284 IEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAM 343
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M+ +G Q + T+ +I+GFCK G + + M + PN + Y IM
Sbjct: 344 RMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIM 400
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 65/158 (41%)
Query: 55 QMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLR 114
QM A P + FN+L A+ A L+K G P+ + ++I LC
Sbjct: 278 QMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHE 337
Query: 115 RTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFG 174
+ + + + ++G + T T+++G C + M+ G+ PN T+
Sbjct: 338 KLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYM 397
Query: 175 AIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
I+ K + E + + M + C P+ +YN ++
Sbjct: 398 HIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNIVI 435
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%)
Query: 43 LKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYT 102
L L+ FH+M P +N + + R A+ L+ G+ P +
Sbjct: 300 LGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVH 359
Query: 103 LNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+I+ L + + + G+ P ++ G + A M
Sbjct: 360 FTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMI 419
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ G PN +T+ ++I GFC G + A ++ M + C PN VVY+ ++
Sbjct: 420 SRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLV 469
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 55/152 (36%)
Query: 48 AAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVI 107
AV + M P V F +L ++R+ H + G+ PD+ ++I
Sbjct: 340 KAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMI 399
Query: 108 NCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ 167
+ + G P T N+++ G C+ A + + ME G
Sbjct: 400 TGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCS 459
Query: 168 PNSYTFGAIINGFCKIGDTESAVLCMRNMVER 199
PN + ++ K G A +R M+E+
Sbjct: 460 PNFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 491
>Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC |
chr2:21455804-21456661 | 20130731
Length = 260
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+ ++ + G D T +IN LC R T + +L + + T N I++
Sbjct: 13 AMEFHEKLVAQGYQLDHLTYGTLINALCKRRETGAAVFLLRQAERENVSLNVVTYNPIID 72
Query: 144 GLCLENNVASAVTFTRHM----------ENAGYQP---NSYTFGAIINGFCKIGDTESAV 190
LC EN V A M + Y P + YTFG ++ CK G+ E A
Sbjct: 73 SLCKENRVTDAFDLFNEMVLKYNTSLLPDVVTYSPLINDVYTFGIMVEALCKEGNVEEAK 132
Query: 191 LCMRN-MVERHCEPNAVVYNAIMDG 214
+ + MV+ EP+ ++N+ +DG
Sbjct: 133 IVIDEMMVQVGVEPDVAIFNSFIDG 157
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 99 DIYTLNIVINCLCHLRRTAFGLSVLG-LVFKTGLRPTTATLNTIVNGLCLENNVASAVTF 157
D+YT I++ LC V+ ++ + G+ P A N+ ++G N A
Sbjct: 111 DVYTFGIMVEALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCFPSNQPDMAKDI 170
Query: 158 TRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M+ G PN + + +I G CKI + A+ M ++ P+A +Y +I+DG
Sbjct: 171 FDSMDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTSIIDG 227
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 142 VNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHC 201
+ GLCL + +A+ F + GYQ + T+G +IN CK +T +AV +R +
Sbjct: 1 MKGLCLNGQIDNAMEFHEKLVAQGYQLDHLTYGTLINALCKRRETGAAVFLLRQAERENV 60
Query: 202 EPNAVVYNAIMD 213
N V YN I+D
Sbjct: 61 SLNVVTYNPIID 72
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 70/177 (39%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+N + A F ML + +N+L + + H A+ + S
Sbjct: 219 LINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKK 278
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V PD +T +I I C VL + + L P T N I+ LC V A
Sbjct: 279 VEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAY 338
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M ++G +P+++++ AI C + A+ + M + C P+ YN ++
Sbjct: 339 QLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVL 395
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 72/169 (42%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A+ F + ML+ P ++ + +A ++ + + P+++T N
Sbjct: 264 VDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNC 323
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+I LC +++ +L + +GL+P T + N I C V A+ ME
Sbjct: 324 IIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDV 383
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
P+ +T+ ++ +IG + A M ++ P+ Y+ ++ G
Sbjct: 384 CFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHG 432
>Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:48037-47705 | 20130731
Length = 110
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 84 AISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVN 143
A+SL H AP+ T + +I+ LC R + ++ + G P T N+++N
Sbjct: 5 ALSLFYEMHCRRFAPNTITYSSLIDGLCKAGRFSCAWELVDEMHDNGQPPNIFTYNSLIN 64
Query: 144 GLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
LC V A+ +++ G QP+ + + +I+G CK G ++A
Sbjct: 65 SLCKNYQVDKAIALVNKIKDQGIQPDMFAYNILIDGLCKGGRLQNA 110
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
+D A++ F++M P ++SL + + ++ A L+ H +G P+I+T N
Sbjct: 2 VDEALSLFYEMHCRRFAPNTITYSSLIDGLCKAGRFSCAWELVDEMHDNGQPPNIFTYNS 61
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC 146
+IN LC + ++++ + G++P N +++GLC
Sbjct: 62 LINSLCKNYQVDKAIALVNKIKDQGIQPDMFAYNILIDGLC 102
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 133 PTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLC 192
P T T +++++GLC + A M + G PN +T+ ++IN CK + A+
Sbjct: 19 PNTITYSSLIDGLCKAGRFSCAWELVDEMHDNGQPPNIFTYNSLINSLCKNYQVDKAIAL 78
Query: 193 MRNMVERHCEPNAVVYNAIMDG 214
+ + ++ +P+ YN ++DG
Sbjct: 79 VNKIKDQGIQPDMFAYNILIDG 100
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%)
Query: 74 FVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRP 133
+ ++ A L++ + P + + LC ++ L TG P
Sbjct: 555 LIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTP 614
Query: 134 TTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCM 193
T ++NG C N + A + M+ G P++ T+ +ING+CK+ A
Sbjct: 615 DAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELF 674
Query: 194 RNMVERHCEPNAVVYNAIMDG 214
++M ER +P+ + Y I+ G
Sbjct: 675 KDMKERGIKPDVIAYTVIIKG 695
Score = 55.8 bits (133), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L +++ L +D AV ++ + +K + +L A SL K G
Sbjct: 406 LFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERG 465
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ N++ R + +L + G+ P + T I+ GLC V A
Sbjct: 466 FKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAE 525
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFC------KIGDTESAVLCMRNMVERHCEPNAVVYN 209
F ++ + + + A++NG+C K + + A + +R M+E + +P+ V+Y+
Sbjct: 526 EFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYS 585
Query: 210 AI 211
I
Sbjct: 586 KI 587
Score = 54.3 bits (129), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 63/166 (37%)
Query: 46 LDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNI 105
L A ML N P ++ +FT + + A +L +G PD T I
Sbjct: 562 LKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTI 621
Query: 106 VINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAG 165
+IN C + + + G+ P T ++NG C N + A + M+ G
Sbjct: 622 MINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERG 681
Query: 166 YQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
+P+ + II G G TE A M++ P A + I
Sbjct: 682 IKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATLKRCI 727
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 94 SGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVAS 153
+GV D Y I LC R+ G +VL ++ G C E +
Sbjct: 254 AGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDE 313
Query: 154 AVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
A + ME G P+ Y + A+++G+C + + A+ ++M+ R + N V+++ I+
Sbjct: 314 AESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCIL 372
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 35/211 (16%)
Query: 35 HLLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSS 94
L+ S L +A FH + N F FN + + ++ A+ +
Sbjct: 55 KLVGMYSSCTDLKSATLLFHNIHKPNVFA----FNWMILGMVYNGYFDNALFYFRLMRDI 110
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGL----------------------- 131
G+ + +T IVI L G V G++ + GL
Sbjct: 111 GLIGNKFTFGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYA 170
Query: 132 --------RPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
A+ +++ G C + A+ M+ GY+PN +T+ AII + ++
Sbjct: 171 CRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARL 230
Query: 184 GDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
GD++ A M M + P+ V +NA++ G
Sbjct: 231 GDSKKAFGFMERMQKEGFIPDVVAWNALISG 261
>Medtr1g064170.1 | PPR domain protein | LC | chr1:28237724-28239601
| 20130731
Length = 400
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 41 RSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDI 100
S T AV F+ ML+ P + ++N + + + Y SL + S DI
Sbjct: 67 ESSHTCSCAVLCFNIMLSNGMAP-ISNYNFVLESLVKVGSYPTVFSLFNKLDES--TQDI 123
Query: 101 YTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
+T I+I C + +S+ + TG PT TL +++ G C + + A+ F +
Sbjct: 124 HTWAILIKCHSVDGNMSSAISLFHKIIDTGHHPTAGTLYSLLYGFCDRHQIHKAMHFYNY 183
Query: 161 M-ENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
+ G+Q + + +I G CKIG+T +A+ +R ++ E V
Sbjct: 184 IILKKGFQLDHKCYLVLIKGLCKIGETHTAIQLLRRALQTDEEDRLV 230
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 58.5 bits (140), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ D + I+I+ L + L + K G+ P T I++ C + + A
Sbjct: 263 GICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGRIEEA 322
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M++ G + + + F +I+GF ++GD + + M +R PN V YNA+++G
Sbjct: 323 FGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNAVVNG 382
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 19/170 (11%)
Query: 62 FPCVKDFNSLFTFVARTKHYAAAI----SLIKRAHSSGVAPDIYTL-------------- 103
+ C+KD +S F+ +T + ++A+ S++K G A D Y L
Sbjct: 657 YICLKDVDSALRFLGKTSYNSSAVTFPVSILKVLIKEGRALDAYKLLMGVQDDLPVMYVD 716
Query: 104 -NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHME 162
+VI+ LC L + L+ K G+ N+I+NGLC + + A +E
Sbjct: 717 YGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLE 776
Query: 163 NAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ T+ +I C+ G + A + MV +P VYN+++
Sbjct: 777 KLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLL 826
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKT---GLRPTTATLNTIVNGLCLENNV 151
G P++ T V+N LC L R V GLV K GL + V G E +
Sbjct: 193 GSRPNLVTYTAVVNALCKLGRVD---EVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVL 249
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAI 211
R M G + ++ +I+GF K+GD E + + M++ PN V Y AI
Sbjct: 250 VEVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAI 309
Query: 212 M 212
M
Sbjct: 310 M 310
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 52 FFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLC 111
ML A P +N+L + ++ A+++ K+ +GV PD+ T NI++
Sbjct: 3 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFK 62
Query: 112 HLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQ--PN 169
+ + LS L+ T +RP T T N I++ L AV M+ + P+
Sbjct: 63 SGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPD 122
Query: 170 SYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
TF ++I+ + G E+ M+ +PN V YNA++
Sbjct: 123 VVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALL 165
>Medtr5g077220.1 | PPR containing plant-like protein | HC |
chr5:32962861-32959451 | 20130731
Length = 981
Score = 58.5 bits (140), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 65 VKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCL--CHLRRTAFGLSV 122
+ +FN + + HY A+ L + G++P T N +I L L A L+V
Sbjct: 500 ILEFNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTV 559
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ + G +P T + ++ ++ AV + M +AG +PN +GA+INGF +
Sbjct: 560 E--MQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALINGFAE 617
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
G + A+ M E N VV +M
Sbjct: 618 HGRLDEALQYFHLMQESGLSANLVVLTTLM 647
Score = 57.8 bits (138), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
G+ P +T N+I+ L + V A T M+ G++P+ TF A+I + ++G A
Sbjct: 530 GISPADSTYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDA 589
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
V+ + M+ +PN VY A+++G
Sbjct: 590 VIVYQEMISAGVKPNETVYGALING 614
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
FN+L + A SL+ + G++ + T NI ++ LS +
Sbjct: 331 FNTLIFISGSHGNLLEAESLLDKMEERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIR 390
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
+ GL P T T ++ LC EN V + ME ++ + I+ + GD +
Sbjct: 391 EVGLFPDTVTYRALLGALCTENMVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGDVD 450
Query: 188 SAVLCMRNMVERHCEPNAVVYNAIMDG 214
A ++++++ EP + + AI+D
Sbjct: 451 KA----NDLLQKYGEPPSFICAAIIDA 473
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 58.5 bits (140), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S + + A+ F +M P +N++ V K A++L S
Sbjct: 90 LVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSN 149
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+ YT N++I+ C +L + + G+ P + +I+ G C NNV A
Sbjct: 150 VEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAH 209
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
M+ Y P+ + ++NGFCK+G E A+
Sbjct: 210 KLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEAL 244
Score = 53.9 bits (128), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 70/218 (32%), Gaps = 66/218 (30%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
PCV S+ + + A L + PD+ + N+V+N C + R LS
Sbjct: 187 PCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSF 246
Query: 123 LGLV-----------------------------------FKTGLRPTTATLNTIVNGLCL 147
+ ++ FK G+ P ++ GL
Sbjct: 247 VWMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSK 306
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV----------------- 190
E V A M G P++Y + A+I G C +G A
Sbjct: 307 EGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVCTHTIL 366
Query: 191 ---LCMRNMVERH-----------CEPNAVVYNAIMDG 214
+C R MV CEP+ V +N +++G
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLING 404
Score = 51.6 bits (122), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 35/199 (17%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD-FNSLFTFVARTKHYAAAISLIKRAHSS 94
+LN + L+ A++F M+ + F ++ ++SL + + Y A + +
Sbjct: 230 VLNGFCKMGRLEEALSFV-WMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQ 288
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC-------- 146
G+ PD+ I+I L R +L + + GL P N ++ GLC
Sbjct: 289 GIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRA 348
Query: 147 -------LENNV----------------ASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
E+NV A A ME G +P+ TF +ING CK
Sbjct: 349 QSLRLEISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKA 408
Query: 184 GDTESA--VLCMRNMVERH 200
+ E A + C + RH
Sbjct: 409 NNLEKAKNLFCKLEVGRRH 427
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISL-----IKRAHS--------SG 95
A F+QM P V FN+L + + + A +L + R HS SG
Sbjct: 379 AQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVGRRHSLHLSLSQGSG 438
Query: 96 VAPDIYTLNIVINCLCH----LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
D L +C LR + G V +P T N ++N LC++ V
Sbjct: 439 QVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEV-----KPDIITYNILLNALCMDREV 493
Query: 152 ASAVTFTRHMENAGY-QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
+A F ++ GY P++ T+G II G + + A + M + EP VY
Sbjct: 494 NAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRT 553
Query: 211 IM 212
+M
Sbjct: 554 LM 555
Score = 47.8 bits (112), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 64/162 (39%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ ML +N P +N L + A ++ G+ P + + ++ C
Sbjct: 142 YTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQ 201
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ + +T P + N ++NG C + A++F ++N G+ N +
Sbjct: 202 ANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNS 261
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++IN F K A M ++ P+ V+Y ++ G
Sbjct: 262 YSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRG 303
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 58.5 bits (140), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S + + A+ F +M P +N++ V K A++L S
Sbjct: 90 LVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSN 149
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+ YT N++I+ C +L + + G+ P + +I+ G C NNV A
Sbjct: 150 VEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAH 209
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
M+ Y P+ + ++NGFCK+G E A+
Sbjct: 210 KLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEAL 244
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 23/182 (12%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISL-----IKRAHS--------SG 95
A F+QM P V FN+L + + K+ A +L + R HS SG
Sbjct: 379 AQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQGSG 438
Query: 96 VAPDIYTLNIVINCLCH----LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
D L +C LR + G V +P T N ++N LC++ V
Sbjct: 439 QVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEV-----KPDIITYNILLNALCMDREV 493
Query: 152 ASAVTFTRHMENAGY-QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
+A F ++ GY P++ T+G II G + + A + M + EP VY
Sbjct: 494 NAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRT 553
Query: 211 IM 212
+M
Sbjct: 554 LM 555
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 69/218 (31%), Gaps = 66/218 (30%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
PCV S+ + + A L + PD+ + N+V+N C + R LS
Sbjct: 187 PCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSF 246
Query: 123 LGLV-----------------------------------FKTGLRPTTATLNTIVNGLCL 147
+ ++ FK G+ P ++ GL
Sbjct: 247 VWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSK 306
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV----------------- 190
E V A M G P+SY + A+I G C + A
Sbjct: 307 EGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTIL 366
Query: 191 ---LCMRNMVERH-----------CEPNAVVYNAIMDG 214
+C R MV CEP+ V +N +++G
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLING 404
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 64/162 (39%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ ML +N P +N L + A ++ G+ P + + ++ C
Sbjct: 142 YTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQ 201
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ + +T P + N ++NG C + A++F ++N G+ N +
Sbjct: 202 ANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNS 261
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++IN F K A C M + P+ V+Y ++ G
Sbjct: 262 YASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRG 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 35/199 (17%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD-FNSLFTFVARTKHYAAAISLIKRAHSS 94
+LN + L+ A++F M+ + F ++ + SL + + Y A + +
Sbjct: 230 VLNGFCKMGRLEEALSFV-WMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKE 288
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC-------- 146
G+ PD+ I+I L R +L + + GL P + N ++ GLC
Sbjct: 289 GIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRA 348
Query: 147 -------LENNV----------------ASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
E+NV A A ME G +P+ TF +ING CK
Sbjct: 349 QSLSLEISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKA 408
Query: 184 GDTESA--VLCMRNMVERH 200
+ E A + C + RH
Sbjct: 409 KNLEKAKNLFCKLEVGRRH 427
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 58.5 bits (140), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
L+ S + + A+ F +M P +N++ V K A++L S
Sbjct: 90 LVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSN 149
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P+ YT N++I+ C +L + + G+ P + +I+ G C NNV A
Sbjct: 150 VEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAH 209
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV 190
M+ Y P+ + ++NGFCK+G E A+
Sbjct: 210 KLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEAL 244
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 23/182 (12%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISL-----IKRAHS--------SG 95
A F+QM P V FN+L + + K+ A +L + R HS SG
Sbjct: 379 AQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQGSG 438
Query: 96 VAPDIYTLNIVINCLCH----LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
D L +C LR + G V +P T N ++N LC++ V
Sbjct: 439 QVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEV-----KPDIITYNILLNALCMDREV 493
Query: 152 ASAVTFTRHMENAGY-QPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNA 210
+A F ++ GY P++ T+G II G + + A + M + EP VY
Sbjct: 494 NAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRT 553
Query: 211 IM 212
+M
Sbjct: 554 LM 555
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 69/218 (31%), Gaps = 66/218 (30%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
PCV S+ + + A L + PD+ + N+V+N C + R LS
Sbjct: 187 PCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSF 246
Query: 123 LGLV-----------------------------------FKTGLRPTTATLNTIVNGLCL 147
+ ++ FK G+ P ++ GL
Sbjct: 247 VWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSK 306
Query: 148 ENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAV----------------- 190
E V A M G P+SY + A+I G C + A
Sbjct: 307 EGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTIL 366
Query: 191 ---LCMRNMVERH-----------CEPNAVVYNAIMDG 214
+C R MV CEP+ V +N +++G
Sbjct: 367 ICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLING 404
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 64/162 (39%)
Query: 53 FHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCH 112
+ ML +N P +N L + A ++ G+ P + + ++ C
Sbjct: 142 YTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQ 201
Query: 113 LRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYT 172
+ + +T P + N ++NG C + A++F ++N G+ N +
Sbjct: 202 ANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNS 261
Query: 173 FGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ ++IN F K A C M + P+ V+Y ++ G
Sbjct: 262 YASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRG 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 35/199 (17%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKD-FNSLFTFVARTKHYAAAISLIKRAHSS 94
+LN + L+ A++F M+ + F ++ + SL + + Y A + +
Sbjct: 230 VLNGFCKMGRLEEALSFV-WMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKE 288
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLC-------- 146
G+ PD+ I+I L R +L + + GL P + N ++ GLC
Sbjct: 289 GIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRA 348
Query: 147 -------LENNV----------------ASAVTFTRHMENAGYQPNSYTFGAIINGFCKI 183
E+NV A A ME G +P+ TF +ING CK
Sbjct: 349 QSLSLEISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKA 408
Query: 184 GDTESA--VLCMRNMVERH 200
+ E A + C + RH
Sbjct: 409 KNLEKAKNLFCKLEVGRRH 427
>Medtr0026s0200.1 | PPR containing plant-like protein | HC |
scaffold0026:95081-98739 | 20130731
Length = 778
Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 63/150 (42%)
Query: 63 PCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSV 122
P V FN+L ++ + G P+ Y+ +++I C R +
Sbjct: 242 PNVHSFNTLMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKM 301
Query: 123 LGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCK 182
+ K + + NTI+ G C +V A F R M G T+ ++ G+C
Sbjct: 302 WEKMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGYCG 361
Query: 183 IGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
I D ESAVL ++M+ + P+A + ++
Sbjct: 362 IEDVESAVLVYKDMLRKDFRPDASTLDMVV 391
>Medtr6g047970.1 | membrane-associated salt-inducible protein | LC |
chr6:17301056-17302162 | 20130731
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 95 GVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASA 154
G+ P + ++ I LC L+ V+GL +TGL+P+ +++G+C +V A
Sbjct: 206 GLTPYPMSYSVRIKGLCKLKMFDEARRVIGLKAQTGLKPSVEDFYPLISGVCEAGDVGLA 265
Query: 155 VTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
+ HM+ P +F +++ CKIG+ E A +M+ C P +++G
Sbjct: 266 RLYFHHMKTDVGIPRCDSFYFLVDSLCKIGEFEHAFDDAMDMIRVGCVPTLTTMKKLVNG 325
>Medtr1g034420.1 | PPR superfamily protein | LC |
chr1:12536372-12535170 | 20130731
Length = 400
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
V P++ T I+I+C C + + + K G RPT +TLN ++ GLC ++ A+
Sbjct: 146 VFPNVDTWKILIDCHCATGNMSSAFCLFHNIIKAGHRPTASTLNYLLQGLCDRGQISKAI 205
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAV 206
F + G++ + ++ +I+ C IG+ + A +R +R CE + V
Sbjct: 206 MFFNYSILKGFELDDCSYDILIHCLCGIGEIKMATHLLR---QRPCEHDTV 253
>Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:37765859-37769483 | 20130731
Length = 724
Score = 58.2 bits (139), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 68/160 (42%)
Query: 49 AVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVIN 108
A+ + +M+ A P V N L + A+ +R ++ G +P+ T I++
Sbjct: 185 ALLVYKEMVKAGVLPTVDTLNCLLEILFTIDRVDLALDQFRRMNNKGCSPNSKTFEILVK 244
Query: 109 CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQP 168
L + ++VL + K +P + + C EN V V R M+++ P
Sbjct: 245 GLIENGQVDEAVAVLEEMLKLECQPDLSFYTCTIPLFCRENKVEEGVRLFRMMKDSDLVP 304
Query: 169 NSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVY 208
+ + A+I CK +SAV + M+E PN V+
Sbjct: 305 EALIYEALIQCLCKNLKLDSAVNLINEMIESGILPNENVF 344
Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 2/152 (1%)
Query: 63 PCVKDFNSLFTFVARTKH--YAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGL 120
P ++ FN+L + + + + A+ + K +GV P + TLN ++ L + R L
Sbjct: 162 PPIQVFNALLGAIVKEESGDFQNALLVYKEMVKAGVLPTVDTLNCLLEILFTIDRVDLAL 221
Query: 121 SVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGF 180
+ G P + T +V GL V AV M QP+ + I F
Sbjct: 222 DQFRRMNNKGCSPNSKTFEILVKGLIENGQVDEAVAVLEEMLKLECQPDLSFYTCTIPLF 281
Query: 181 CKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
C+ E V R M + P A++Y A++
Sbjct: 282 CRENKVEEGVRLFRMMKDSDLVPEALIYEALI 313
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 4/179 (2%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL + ++ +D A+ F +M P K F L + A+++++
Sbjct: 207 LLEILFTIDRVDLALDQFRRMNNKGCSPNSKTFEILVKGLIENGQVDEAVAVLEEMLKLE 266
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PD+ I C + G+ + ++ + L P ++ LC + SAV
Sbjct: 267 CQPDLSFYTCTIPLFCRENKVEEGVRLFRMMKDSDLVPEALIYEALIQCLCKNLKLDSAV 326
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIMDG 214
M +G PN F +IN +C++G + A++ + + P +N +++G
Sbjct: 327 NLINEMIESGILPNENVFVHMINCYCELGKIDEAIMFLEDKQVSETAP----FNVLLEG 381
>Medtr7g099380.1 | PPR containing plant-like protein | HC |
chr7:39851414-39850788 | 20130731
Length = 208
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 92 HSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNV 151
++G+ P+ T NI+++ C L+ + V L+ + P T NT+V GLC E +
Sbjct: 2 KNNGLVPNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKI 61
Query: 152 ASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYN 209
AV ME+ P+ T+ +I+G + + +A + M R + NAV +N
Sbjct: 62 DEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHN 119
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 4/174 (2%)
Query: 42 SLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIY 101
LK L AV M + P V +N++ + A+ L S + PD
Sbjct: 22 KLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKIDEAVRLRDEMESLRLVPDGV 81
Query: 102 TLNIVIN-CLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRH 160
T N +I+ C H + +A ++ + G++ T N +V C E NV A
Sbjct: 82 TYNTLIDGCFEH-QGSAAAFKLVEEMKSRGVKENAVTHNIMVKWFCKEGNVDEASNAMAK 140
Query: 161 MENAGYQPNSY--TFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
M +G+ ++ +ING+CK G A M M + + + N I+
Sbjct: 141 MSESGFLLIVLLISYNMMINGYCKAGKMAKAFKMMDEMGRKGLKTDTFTLNTIL 194
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 68 FNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVF 127
+N L + K A+ + + + + PD++T N ++ LC + + + +
Sbjct: 13 YNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKIDEAVRLRDEME 72
Query: 128 KTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTE 187
L P T NT+++G A+A M++ G + N+ T ++ FCK G+ +
Sbjct: 73 SLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHNIMVKWFCKEGNVD 132
Query: 188 SAVLCMRNMVE 198
A M M E
Sbjct: 133 EASNAMAKMSE 143
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 130 GLRPTTATLNTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESA 189
GL P T N +V+G C + AV T M P+ +T+ ++ G C G + A
Sbjct: 5 GLVPNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKIDEA 64
Query: 190 VLCMRNMVERHCEPNAVVYNAIMDG 214
V M P+ V YN ++DG
Sbjct: 65 VRLRDEMESLRLVPDGVTYNTLIDG 89
>Medtr2g016740.1 | PPR containing plant-like protein | HC |
chr2:5175787-5177502 | 20130731
Length = 489
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 36 LLNSIRSLKTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSG 95
LL+S+ + K + A + + L P ++ + L R ++ A + G
Sbjct: 157 LLDSLGATKLVKEAEVVYEK-LRDRFVPNLQTYTILLNGWCRVRNLLEAGRVWNEMIDKG 215
Query: 96 VAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAV 155
PDI NI++ L ++ + G+ + ++ G P + ++ LC + + AV
Sbjct: 216 FNPDIVAHNIMLEGLLRCQKKSDGIKLFEVMKAKGPLPNVRSYTILIQDLCKQMMMREAV 275
Query: 156 TFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
+ M + G + + + +I GF + + ++ M ER C P+ YNA++
Sbjct: 276 EYFNEMVDRGCRSDVALYTCLITGFGRQKKMDVVYDLLKEMRERGCPPDGRTYNALI 332
>Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30134387-30135572 | 20130731
Length = 276
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 79 KHYAAAISLIKRAHSSGVAPDIYTLNIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATL 138
K A++L+ HS + PD +T +I+ LC RT+ ++ + + G T
Sbjct: 93 KMVDEAVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVWDLIDEMHERGQPANVITY 152
Query: 139 NTIVNGLCLENNVASAVTFTRHMENAGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVE 198
N++++ LC + + ++ G QPN YT+ +++G CK G + A ++++
Sbjct: 153 NSLLDALCKNHQI----------KDQGIQPNLYTYTLLVDGICKNGKLKDAKAVYQDLLI 202
Query: 199 RHCEPNAVVYNAIMD 213
+ + ++YN +++
Sbjct: 203 KGYHLDVIMYNVMVN 217
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Query: 44 KTLDAAVAFFHQMLAANPFPCVKDFNSLFTFVARTKHYAAAISLIKRAHSSGVAPDIYTL 103
K +D AV ++M + P + SL + + + LI H G ++ T
Sbjct: 93 KMVDEAVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVWDLIDEMHERGQPANVITY 152
Query: 104 NIVINCLCHLRRTAFGLSVLGLVFKTGLRPTTATLNTIVNGLCLENNVASAVTFTRHMEN 163
N +++ LC + + G++P T +V+G+C + A + +
Sbjct: 153 NSLLDALCKNHQ----------IKDQGIQPNLYTYTLLVDGICKNGKLKDAKAVYQDLLI 202
Query: 164 AGYQPNSYTFGAIINGFCKIGDTESAVLCMRNMVERHCEPNAVVYNAIM 212
GY + + ++N CK G + A+ + M +C P+ V Y ++
Sbjct: 203 KGYHLDVIMYNVMVNWLCKEGLFDEALSILSKMEHNNCTPDVVTYEIVI 251