Miyakogusa Predicted Gene

Lj5g3v0290420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I3K2_MEDTR 738 88.8 94.2 (tr|G7I3K2) Alpha-amylase OS=Medicago truncatula GN=MTR_1g019440 PE=3 SV=1
TAIR_pep AT4G25000.1 553 67.4 81.3 | Symbols: ATAMY1, AMY1 | alpha-amylase-like | chr4:12852109-12853825 REVERSE LENGTH=423
Medicago Medtr1g019440.1 738 88.8 94.2 | alpha amylase domain protein | HC | chr1:5870673-5873171 | 20130731
Soybean Glyma17g36090.1 705 85.3 92.1  
LJGI gnl|LJGI|FS329665 1453 100.0 100.0 similar to UniRef100_P17859 Cluster: Alpha-amylase precursor; n=1; Vigna mungo|Rep: Alpha-amylase precursor - Vigna mungo (Rice bean) (Black gram), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0290420.1 length: 421 aa.
IPR006046 Alpha amylase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
FPrintScan PR00110 ALPHAAMYLASE 1.8e-06 103-114
195-206
299-311
IPR006047 Glycosyl hydrolase, family 13, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
HMMPfam PF00128 Alpha-amylase 3.4e-26 44-342
IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
HMMSmart SM00642 Alpha-amylase 7.8e-59 24-361
IPR012850 Alpha-amylase, C-terminal beta-sheet
Molecular Function GO:0004556 alpha-amylase activity    
Molecular Function GO:0005509 calcium ion binding    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF07821 Alpha-amyl_C2 1.6e-22 363-421
HMMSmart SM00810 Alpha-amylase 3e-31 362-421
IPR013775 Alpha-amylase, plant
Molecular Function GO:0004556 alpha-amylase activity    
Molecular Function GO:0005509 calcium ion binding    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPIR PIRSF001028 Alpha-amylase, 0 1-421
IPR013780 Glycosyl hydrolase, family 13, all-beta
Gene3D G3DSA:2.60.40.1180 no description 4.3e-25 366-421
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 4.4e-72 26-363
IPR015902 Glycoside hydrolase, family 13
Molecular Function GO:0003824 catalytic activity    
HMMPanther PTHR10357 ALPHA-AMYLASE 5.9e-157 28-421
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 8.4e-79 25-366
no_ID  
HMMPanther PTHR10357:SF9 ALPHA-AMYLASE 5.9e-157 28-421
Seg seg seg NA 3-27
superfamily SSF51011 Glycosyl 1.4e-21 366-421
Wolf-PSORT
Lj5g3v0290420.1	chlo 9, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0290420.1