Miyakogusa Predicted Gene

Lj4g3v1719700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S4H6_LOTJA 450 69.9 69.9 (tr|I3S4H6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G74250.1 216 53.5 61.6 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr1:27920328-27922414 FORWARD LENGTH=630
Medicago Medtr4g109510.1 365 47.2 53.7 | DnaJ heat shock family protein, putative | HC | chr4:45511103-45507757 | 20130731
Soybean Glyma17g08590.1 407 48.0 55.2  
LJGI gnl|LJGI|GO008766 603 99.7 99.7 weakly similar to UniRef100_Q6VBJ3 Cluster: Epa4p; n=1; Candida glabrata|Rep: Epa4p - Candida glabrata (Yeast) (Torulopsis glabrata), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1719700.1 length: 490 aa.
IPR003604 Zinc finger, U1-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00451 U1-like 9.1e-06 155-189
IPR007087 Zinc finger, C2H2
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 160-182
462-484
ProfileScan PS50157 ZINC_FINGER_C2H2_2 9.099 158-187
460-489
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 6.4 158-182
460-484
IPR022755 Zinc finger, double-stranded RNA binding
HMMPfam PF12171 zf-C2H2_jaz 3.1e-11 158-183
no_ID  
Coil coil coiled-coil NA 54-86
91-129
189-210
234-255
HMMPanther PTHR24078 DNAJ 2.9e-18 21-210
HMMPanther PTHR24078:SF9 DNAJ 2.9e-18 21-210
HMMPfam PF12756 zf-C2H2_2 0.0094 459-487
Seg seg seg NA 93-125
135-157
193-213
225-239
259-274
329-346
358-372
superfamily SSF57667 C2H2 2.5e-15 143-209
Wolf-PSORT
Lj4g3v1719700.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1719700.1