Miyakogusa Predicted Gene
- Lj4g3v1719700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1719700.1 Non Chatacterized Hit- tr|I3S4H6|I3S4H6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.83,0,ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; coiled-coil,NULL; C2H2
a,CUFF.49631.1
(490 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74250.1 | Symbols: | DNAJ heat shock N-terminal domain-cont... 216 2e-56
AT3G11450.1 | Symbols: | DnaJ domain ;Myb-like DNA-binding doma... 60 3e-09
AT5G06110.2 | Symbols: | DnaJ domain ;Myb-like DNA-binding doma... 57 4e-08
AT5G06110.1 | Symbols: | DnaJ domain ;Myb-like DNA-binding doma... 57 4e-08
>AT1G74250.1 | Symbols: | DNAJ heat shock N-terminal
domain-containing protein | chr1:27920328-27922414
FORWARD LENGTH=630
Length = 630
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 122/198 (61%), Gaps = 6/198 (3%)
Query: 1 MGL---PVPQAPLMGNLDSPYAQVTAFYGYWMGFSSVMDFCWADEYDVMAGPNRRSRRLM 57
+GL V +AP+MGNL+SPYAQVTAFY YW+GF +VMDFCW DEYDVM GPNR+SRR+M
Sbjct: 145 LGLRMDSVREAPIMGNLESPYAQVTAFYNYWLGFCTVMDFCWVDEYDVMGGPNRKSRRMM 204
Query: 58 EEENNKVRRKAKKEYNETVRRLADFAKKRDKRVIDXXXXXXXXXXXXXXXXXXXXXXXXX 117
EEEN K R+KAK+EYN+TVR LA+F KKRDKRVID
Sbjct: 205 EEENKKSRKKAKREYNDTVRGLAEFVKKRDKRVIDMLVKKNAEMEKKKEEERERKKKMEK 264
Query: 118 XXXXXXXXYEEPEWAKVXXXXXX---XXXXXXXXXXXXXXXXXFYCVLCGKKFKSEKQWK 174
YEEPEWAK YC++C KKFKSEKQWK
Sbjct: 265 ERLERAMNYEEPEWAKAHEGEDEGAGLSELEEEDDDAKRKNEQLYCIVCSKKFKSEKQWK 324
Query: 175 NHEQSKKHKEKVAEFKDS 192
NHEQSKKHKEKVAE ++S
Sbjct: 325 NHEQSKKHKEKVAELRES 342
>AT3G11450.1 | Symbols: | DnaJ domain ;Myb-like DNA-binding domain
| chr3:3605459-3607402 REVERSE LENGTH=647
Length = 647
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%)
Query: 7 QAPLMGNLDSPYAQVTAFYGYWMGFSSVMDFCWADEYDVMAGPNRRSRRLMEEENNKVRR 66
+ P +G+ ++P V FY +W F S +F +E+D+ +R RR ME+EN K
Sbjct: 215 RIPDLGDENTPLKDVDKFYNFWYAFKSWREFPDEEEHDLEQADSREERRWMEKENAKKTV 274
Query: 67 KAKKEYNETVRRLADFAKKRDKRVI 91
KA+KE + +R L D A ++D R++
Sbjct: 275 KARKEEHARIRTLVDNAYRKDPRIV 299
>AT5G06110.2 | Symbols: | DnaJ domain ;Myb-like DNA-binding domain
| chr5:1841009-1843000 REVERSE LENGTH=663
Length = 663
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 9 PLMGNLDSPYAQVTAFYGYWMGFSSVMDFCWADEYDVMAGPNRRSRRLMEEENNKVRRKA 68
P +G+ ++P +V FY W F S +F +E+D+ +R +R ME EN + +KA
Sbjct: 217 PDLGDENTPLKEVDRFYSTWYTFKSWREFPEEEEHDIEQAESREEKRWMERENARKTQKA 276
Query: 69 KKEYNETVRRLADFAKKRDKRV 90
+KE +R L D A K+D R+
Sbjct: 277 RKEEYARIRTLVDNAYKKDIRI 298
>AT5G06110.1 | Symbols: | DnaJ domain ;Myb-like DNA-binding domain
| chr5:1841009-1843000 REVERSE LENGTH=663
Length = 663
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 9 PLMGNLDSPYAQVTAFYGYWMGFSSVMDFCWADEYDVMAGPNRRSRRLMEEENNKVRRKA 68
P +G+ ++P +V FY W F S +F +E+D+ +R +R ME EN + +KA
Sbjct: 217 PDLGDENTPLKEVDRFYSTWYTFKSWREFPEEEEHDIEQAESREEKRWMERENARKTQKA 276
Query: 69 KKEYNETVRRLADFAKKRDKRV 90
+KE +R L D A K+D R+
Sbjct: 277 RKEEYARIRTLVDNAYKKDIRI 298