Miyakogusa Predicted Gene

Lj4g3v1719700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1719700.1 Non Characterized Hit- tr|I3S4H6|I3S4H6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.83,0,ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; coiled-coil,NULL; C2H2
a,CUFF.49631.1
         (490 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109510.1 | DnaJ heat shock family protein, putative | HC ...   365   e-101
Medtr7g109430.1 | DnaJ domain; Myb-like DNA-binding domain prote...    64   4e-10
Medtr3g113680.1 | DnaJ domain; Myb-like DNA-binding domain prote...    62   1e-09

>Medtr4g109510.1 | DnaJ heat shock family protein, putative | HC |
           chr4:45511103-45507757 | 20130731
          Length = 640

 Score =  365 bits (937), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 254/538 (47%), Positives = 289/538 (53%), Gaps = 82/538 (15%)

Query: 1   MGL---PVPQAPLMGNLDSPYAQVTAFYGYWMGFSSVMDFCWADEYDVMAGPNRRSRRLM 57
           +GL    V QAPLMGNLDSPYAQVTAFY YW+GFS+VMDFCWADEYD MAGPNR+SRRLM
Sbjct: 137 LGLGIDSVRQAPLMGNLDSPYAQVTAFYSYWLGFSTVMDFCWADEYDAMAGPNRKSRRLM 196

Query: 58  EEENNKVRRKAKKEYNETVRRLADFAKKRDKRVIDXXXXXXXXXXXXXXXXXXXXXXXXX 117
           EEENNKVRRKAK+EYN+TVR+LADF KKRDKRVID                         
Sbjct: 197 EEENNKVRRKAKREYNDTVRKLADFVKKRDKRVIDMKVKKNLEMEKKKEEEKERKRKLEM 256

Query: 118 XXXXXXXXYEEPEWAKVXXXXXXXXXXXXXXXXXXXXXXXFYCVLCGKKFKSEKQWKNHE 177
                   YEEP+WAKV                       FYCVLCGKKFKSEKQWKNHE
Sbjct: 257 ERKERAMAYEEPDWAKV--DEEEVEDLYEDDESEKKDEKEFYCVLCGKKFKSEKQWKNHE 314

Query: 178 QSKKHKEKVAEFKDSXXXXXXXXXXXXXXXXXXXX--XNGRPESEEGGIXXXXXXXXXXX 235
           QSKKHKEKVAEFKDS                         R ESEE G+           
Sbjct: 315 QSKKHKEKVAEFKDSLDDEEELEAEVDEEGESEREGVDEERLESEEDGV--------RVD 366

Query: 236 XXXXRIRDGLNVAEEETRNEVKLXXXXXXXXXXXXXXXXFDATHSKESEKADVS-----V 290
               RIRD LNVA+EE+ N V+L                  A H+K+ E+   S      
Sbjct: 367 DLEERIRDSLNVADEESANGVELNDDGDDDEFFD-------AEHAKDGEETGASVDFVVN 419

Query: 291 DFDDDENGFLEAMV-------------------------------AGRKSKKPGASTQKP 319
           D DDDEN  LE MV                               AGRKS+KP AST KP
Sbjct: 420 DDDDDENDVLETMVSGHKGRFDFDENDGNDDDVDDDEIGVLEAMLAGRKSRKPSASTHKP 479

Query: 320 KASVTPSQTXXXXXXXXXXXXXXXXXXDGVGFMEYNNQXXXXXXXXXXXXX-----XXVD 374
           + S TP+Q                   DGVG MEYNN+                     +
Sbjct: 480 EVSETPTQI------------ESENENDGVGAMEYNNRKPAKKKRRAKKEKGGKNGDETN 527

Query: 375 EPHGAAFSANYENRNSDGNNNSFAEESSSQYSVENEEN-GKENEQVGRDKKS-SNQPVDK 432
            P    +  N  N    G+ +S+A+ESSSQY  ENE+N GKENEQVGRDKK  SNQPVDK
Sbjct: 528 VPTNGKYEKNVINI---GDGDSYAQESSSQYFEENEDNAGKENEQVGRDKKKISNQPVDK 584

Query: 433 KGTSKDAKTRAKTSSKGRKAKASKNLDNICEACGEEFESRNKLHKHLGDSGHASIKGR 490
           KGTSK+ K R+K S++GR  K ++NL + CE C EEFESRNKLHKHL DSGHA++K R
Sbjct: 585 KGTSKNTKPRSKLSTRGR--KPNRNLGHFCETCEEEFESRNKLHKHLSDSGHAAMKSR 640


>Medtr7g109430.1 | DnaJ domain; Myb-like DNA-binding domain protein
           | HC | chr7:44742394-44740433 | 20130731
          Length = 653

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 4   PVPQAPLMGNLDSPYAQVTAFYGYWMGFSSVMDFCWADEYDVMAGPNRRSRRLMEEENNK 63
           P+P    +G+  S   +V +FY +W  F S  +F  ADE+D+    +R  +R ME +N K
Sbjct: 212 PIPS---LGDDKSSIKEVDSFYNFWYSFKSWREFPQADEFDLEQAESRDHKRWMERQNAK 268

Query: 64  VRRKAKKEYNETVRRLADFAKKRDKRVI 91
           +  KA+KE    +R L D A KRD R++
Sbjct: 269 LSEKARKEEYARIRTLVDNAYKRDPRIL 296


>Medtr3g113680.1 | DnaJ domain; Myb-like DNA-binding domain protein
           | HC | chr3:53238873-53236019 | 20130731
          Length = 653

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 4   PVPQAPLMGNLDSPYAQVTAFYGYWMGFSSVMDFCWADEYDVMAGPNRRSRRLMEEENNK 63
           P+P    +G+  S   +V +FY +W  F S  +F  ADE+D     +R  +R ME +N K
Sbjct: 212 PIPS---LGDDKSSIKEVDSFYNFWYSFKSWREFPQADEFDFEQAESRDHKRWMERQNAK 268

Query: 64  VRRKAKKEYNETVRRLADFAKKRDKRVI 91
           +  KA+KE    +R L D A KRD R++
Sbjct: 269 LSEKARKEEYARIRTLVDNAYKRDPRIL 296