Miyakogusa Predicted Gene

Lj4g3v1202190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MLR1_SOYBN 1043 76.6 84.1 (tr|K7MLR1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G17616.1 583 47.9 65.3 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:9819608-9821632 FORWARD LENGTH=674
Medicago Medtr4g099200.1 1017 72.3 82.2 | PPR containing plant protein | HC | chr4:41103641-41099252 | 20130731
Soybean Glyma17g15910.1 883 77.5 84.7  
LJGI gnl|LJGI|TC72890 636 99.4 99.4 similar to UniRef100_A7R575 Cluster: Chromosome undetermined scaffold_896, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_896, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1202190.1 length: 681 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 1.9e-07 527-573
HMMPfam PF13812 PPR_3 0.034 603-631
HMMTigr TIGR00756 PPR: 0.00025 537-561
ProfileScan PS51375 PPR 7.278 127-161
211-245
284-314
449-483
414-448
526-560
561-591
600-634
no_ID  
HMMPanther PTHR24015 FAMILY 1.1e-20 61-641
HMMPanther PTHR24015:SF0 SUBFAMILY 1.1e-20 61-641
Seg seg seg NA 396-405
Wolf-PSORT
Lj4g3v1202190.1	chlo 5, nucl 4, mito 2.5, cysk_nucl 2.5, nucl_plas 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1202190.1