Miyakogusa Predicted Gene
- Lj4g3v1202190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1202190.1 Non Chatacterized Hit- tr|I1L8R9|I1L8R9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54262
PE,20.35,3e-18,seg,NULL; PPR_2,Pentatricopeptide repeat;
PPR_3,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
,CUFF.48621.1
(2046 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72890 similar to UniRef100_A7R575 Cluster: Chromosome... 636 0.0
gnl|LJGI|BW598227 400 e-110
>gnl|LJGI|TC72890 similar to UniRef100_A7R575 Cluster: Chromosome undetermined
scaffold_896, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_896, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(27%)
Length = 473
Score = 636 bits (321), Expect = 0.0
Identities = 327/329 (99%)
Strand = Plus / Plus
Query: 1718 cttctcttggcatgtatcgtgaaatcactatcgtgtggggagacattaagagactcatga 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cttctcttggcatgtatcgtgaaatcactatcgtgtggggagacattaagagactcatga 62
Query: 1778 agggtgccgatttagttggaaatagagatttgtatgagttattgctcctaaactttttac 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agggtgccgatttagttggaaatagagatttgtatgagttattgctcctaaactttttac 122
Query: 1838 gtggtggttactttgagagagtgatggaggtcattgatcatatgagaaaccataacatgt 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtggtggttactttgagagagtgatggaggtcattgatcatatgagaaaccataacatgt 182
Query: 1898 atactgacaaatggatgtacaaaagtgagttccttagacttcataagaatctttataggc 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atactgacaaatggatgtacaaaagtgagttccttagacttcataagaatctttataggc 242
Query: 1958 gtttaaaagcatcagatgctagaacagaagcacaaagcaaaaggtttgagcatgttcagg 2017
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtttaaaagcatcagatgctacaacagaagcacaaagcaaaaggtttgagcatgttcagg 302
Query: 2018 aatttaagaaatgggtgggtattgactaa 2046
||||| |||||||||||||||||||||||
Sbjct: 303 aatttcagaaatgggtgggtattgactaa 331
>gnl|LJGI|BW598227
Length = 473
Score = 400 bits (202), Expect = e-110
Identities = 299/330 (90%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 1718 cttctcttggcatgtatcgtgaaatcactatcgtgtggggagacattaagagactcatga 1777
||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||
Sbjct: 2 cttctcttggcttgtatcgtgaaatcactatcgtgtggagagacatttagacactcatga 61
Query: 1778 agggtgccgatttagttggaaatagagatttgtatgagttattgctcctaaactttttac 1837
| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 62 atggtgccgatttagttggaaatacagatttgtatgagttattgctccgaaactttttac 121
Query: 1838 gtggtggttactttgagagagtgatggaggtcattgatcatatg-agaaaccataacatg 1896
||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||
Sbjct: 122 ctggtggttactttgagacagtgatggacgtcattgatcatatgcagaaaccaccacatg 181
Query: 1897 tatactgacaaatggatgtacaaaagtgagttccttagacttcataagaatctttatagg 1956
||||||||| ||||||||||||||| ||||||||||| |||||||| |||| ||||| |
Sbjct: 182 tatactgacgaatggatgtacaaaactgagttccttacacttcatactaatccttataag 241
Query: 1957 cgtttaaaagcatcagatgctagaacagaagcacaaagcaaaaggtttgagcatgttcag 2016
||||| |||||||| ||||||| |||| | |||| | ||||||||||||||||||||||
Sbjct: 242 cgtttgaaagcatccgatgctacaacacaggcactcatcaaaaggtttgagcatgttcag 301
Query: 2017 gaatttaagaaatgggtgggtattgactaa 2046
|||||| | | |||||||||||||||||||
Sbjct: 302 gaatttcaaacatgggtgggtattgactaa 331