Miyakogusa Predicted Gene
- Lj4g3v1202190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1202190.1 Non Chatacterized Hit- tr|I1L8R9|I1L8R9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54262
PE,20.35,3e-18,seg,NULL; PPR_2,Pentatricopeptide repeat;
PPR_3,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
,CUFF.48621.1
(681 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 583 e-166
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 9e-68
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 87 4e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 57 3e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 52 2e-06
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 50 4e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 4e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 5e-06
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
>AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:9819608-9821632 FORWARD
LENGTH=674
Length = 674
Score = 583 bits (1502), Expect = e-166, Method: Compositional matrix adjust.
Identities = 309/645 (47%), Positives = 421/645 (65%), Gaps = 11/645 (1%)
Query: 38 FSSSGYCERLPWERSTEEILLGKLKSALRSHQVHEAWESFQDFRTLYGYPEVHLVNRLIV 97
F +S RL WE S++ IL KL++AL+ H+V +AW+ F+DF+ LYG+PE ++NR +
Sbjct: 38 FCTSVKPARLNWEVSSQVILKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVT 97
Query: 98 QSSYSNDHVWIRKACDLALQIVEEKSGLLQSDGLIKLALSLARLQMLSHVSVILRLMLNK 157
SYS+D W+ KA DL +++ G+L D L KL+LSLAR QM+ ILR+ML K
Sbjct: 98 VLSYSSDAGWLCKASDLTRLALKQNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEK 157
Query: 158 GCVPPMNLLSLVVFHVVKTEIGTQIASNYLSQVCDFYNCLN--DKKSHLAVMVKPDTVVF 215
G V ++L LVV H+VKTEIGT +ASNYL QVCD + N + S +VKPDTV+F
Sbjct: 158 GYVLTSDVLRLVVMHMVKTEIGTCLASNYLVQVCDRFVEFNVGKRNSSPGNVVKPDTVLF 217
Query: 216 NLVLDACVRFKLSLKGLCLIELMAMTGTVADAHSIVLISQILEMNGLRDEMMELKGHIDG 275
NLVL +CVRF SLKG LIELMA VADA+SIV++S I EMNG+RDE+ + K HI
Sbjct: 218 NLVLGSCVRFGFSLKGQELIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQ 277
Query: 276 VSAAYARHYSQFYDSLLSLHFKFNDIDAAAKLVLDMNRLRDCHISKECTKRLQKPCFIGI 335
V HY F+D+LLSL FKF+DI +A +L LDM + + + +KP + +
Sbjct: 278 VPPQLLGHYQHFFDNLLSLEFKFDDIGSAGRLALDMCKSKVLVSVENLGFDSEKPRVLPV 337
Query: 336 GSSNLKNGLKIHIEPELLQKDSVLKVEGRQNLIFYKGGKLALSNRAMVMFICGYKKDGQI 395
GS ++++GLKIHI P+LLQ+DS L V+ + Y KL ++N+ + + GYK+ +
Sbjct: 338 GSHHIRSGLKIHISPKLLQRDSSLGVDTEATFVNYSNSKLGITNKTLAKLVYGYKRHDNL 397
Query: 396 XXXXXXXXXXQEGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYML 455
L+++ GS LC+DVI AC+ +GWLE+AHDILDD+ + G PM TY +
Sbjct: 398 PELSKL-------LFSLGGSRLCADVIDACVAIGWLEAAHDILDDMNSAGYPMELATYRM 450
Query: 456 LLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQI 515
+LS Y M R A+ LLKQM K L S++ E+ + + DL V +I
Sbjct: 451 VLSGYYKSKMLRNAEVLLKQMTKAGLITDPSNEIVVSPETEEKDSENTELRDLLVQ--EI 508
Query: 516 LKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSL 575
G+ ++Y NSS+++FCKA M DAL YR++ KMKI PT+Q+F ++ YSSL
Sbjct: 509 NAGKQMKAPSMLYELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSL 568
Query: 576 GMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTD 635
GMYREITIVWGDIKR + +L +DL E L++NFLRGGYFERVME+I +M+ ++MY D
Sbjct: 569 GMYREITIVWGDIKRNIASKNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYND 628
Query: 636 KWMYKSEFLRLHKNLYRRLKASDARTEAQSKRFEHVQEFKKWVGI 680
MYK+E+L+LHKNLYR LKASDA TEAQ++R EHV+ F+K VGI
Sbjct: 629 LTMYKNEYLKLHKNLYRTLKASDAVTEAQAQRLEHVKTFRKLVGI 673
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 198/698 (28%), Positives = 339/698 (48%), Gaps = 83/698 (11%)
Query: 60 KLKSALRSHQVHEAWESFQDFRTLYGYPEVHLVNRLIVQSSYSNDHVWIRKACDLALQIV 119
+++ A+ H+ EAW F+ + G+P +VN ++V + S D W++K L Q
Sbjct: 101 EIQIAVDEHRCDEAWRLFEQHMQMEGFPRKSVVNNVVVCFAESLDSNWLQKGYSLVEQAY 160
Query: 120 EE-KSGLLQSDGLIKLALSLARLQMLSHVSVILRLMLNKGCVPPMNLLSLVVFHVVKTEI 178
EE K LL+ + L+ L+L+LA+ M S ILR ++ P ++ S V+ H+
Sbjct: 161 EEGKQNLLEKEPLLYLSLALAKSGMAVPASTILRKLVETEEYPHVSAWSAVLAHMSLAGS 220
Query: 179 GTQIASNYLSQVCD-FYNCLND--KKSHLAVM-VKPDTVVFNLVLDACVRFKLSLKGLCL 234
G+ +++ + ++ F+N D KKS+ ++ +KP+T V N+ L C+ F + K L
Sbjct: 221 GSYLSAELVLEIGYLFHNNRVDPRKKSNAPLLAMKPNTQVLNVALAGCLLFGTTRKAEQL 280
Query: 235 IELMAMTGTVADAHSIVLISQILEMNGLRDEMMELKGHIDGVSAAYARHYSQFYDSLLSL 294
++++ G ADA+ +V+++ I E NG R+E+ +L+ HID + QFY+ LL
Sbjct: 281 LDMIPKIGVKADANLLVIMAHIYERNGRREELRKLQRHIDEACNLNESQFWQFYNCLLMC 340
Query: 295 HFKFNDIDAAAKLVLDMNRLRDCHISKEC------------TKRLQKPCFIGIGS----- 337
H KF D+++A+K+VL+M LR +++ RL G GS
Sbjct: 341 HLKFGDLESASKMVLEM--LRRGKVARNSLGAAILEFDTADDGRLYTKRVSGKGSEVKEH 398
Query: 338 -------------------SNLKNGLKIHIEPELLQKDSVLKVEGRQNLIFYKGGKLALS 378
S + LK+ E + + + K+ + LI + G L +
Sbjct: 399 DNPETRVVSIHSMIPYDEFSRDRKFLKLEAEAKDVLGALLAKLHVQVELITSERGVLQPT 458
Query: 379 NRAMVMFICGYKKDGQIXXXXXXXXXXQ-EGLYAVAGSSLCSDVIGACIQMGWLESAHDI 437
V + + G++ + E + +S+ +VI ACI +G L+ AHD+
Sbjct: 459 EEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSMLINVINACISLGMLDQAHDL 518
Query: 438 LDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKK--VSLHHKLSDDAFDKHII 495
LD++ G G Y LL AY N RE +LL+ +K + L + +I
Sbjct: 519 LDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEALIQSQVI 578
Query: 496 CEET--AYSVGKSDLAVALAQILKGEDQTVLPL--------------------------- 526
+T A +V K + A+IL+G +Q L
Sbjct: 579 QNDTHGALNVFKE---MKEAKILRGGNQKFEKLLKGCEGNAEAGLMSKLLREIREVQSLD 635
Query: 527 --VYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLG-MYREITI 583
V+++N+ I FF K G+++DA KA +RM + P QTF M+ GY+++G Y E+T
Sbjct: 636 AGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYAAIGSKYTEVTE 695
Query: 584 VWGDIKRLMKG-ADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKSE 642
+WG++K + + + +++L + +L F+RGG+F R EV++ M NM+ DK+ Y+
Sbjct: 696 LWGEMKSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEMMEKKNMFVDKYKYRML 755
Query: 643 FLRLHKNLYRRLKASDARTEAQSKRFEHVQEFKKWVGI 680
FL+ HK Y+ KA ++E+Q K+ E FKKW+G+
Sbjct: 756 FLKYHKTAYKG-KAPKVQSESQLKKREAGLVFKKWLGL 792
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 161/653 (24%), Positives = 279/653 (42%), Gaps = 60/653 (9%)
Query: 38 FSSSGYCERLPWERSTEEILLGKLKSALRSHQVHEAWESFQDFRTLYGYPEVHLVNRLIV 97
FSS P ++S+ E L +L +H +AW+ F+ F P+ L+N LI
Sbjct: 15 FSSIPSKTLTPHQKSSFE---STLHHSLITHDTDQAWKVFRSFAAASSLPDKRLLNSLIT 71
Query: 98 Q-SSYSN--DHVWIR---KACDLALQIVEEKSGLLQSDGLIKLALSLARLQMLSHVSVIL 151
SS+ N + +R K ++ V EK +L ++ L +L S ++ L
Sbjct: 72 HLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPILLEFETVRTVLESMKLAKASGPALAL 131
Query: 152 -RLMLNKGCVPPMNLLSLVVFHVVKTEIGTQIASNYLSQVCDFYNCLNDKKSHLAVMVKP 210
M P +L ++ V + E G+ A +L + D+K +KP
Sbjct: 132 VECMFKNRYFVPFDLWGDLLIDVCR-ENGSLAA--FLKVFRESCRIAVDEKLDF---MKP 185
Query: 211 DTVVFNLVLDACVRFKLSL-KGLCLIELMAMTGTVADAHSIVLISQILEMNGLRDEMMEL 269
D V N L+AC R SL LIE M + G D S ++ + GLR+++ EL
Sbjct: 186 DLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGLREKISEL 245
Query: 270 KGHIDGVSAAYARHYSQFYDSLLSLHFKFNDIDAAAKLVLDMNRLRDCHISKECTKRLQK 329
+ +DG+ A R Y S++S + K D+D+A+ ++L L+ + ++
Sbjct: 246 EDLMDGLGFASRR---ILYSSMISGYVKSGDLDSASDVIL--CSLKGVGEASSFSEETYC 300
Query: 330 PCFIG-IGSSNLKNGLKIHIEPELLQKDSVLKVEGRQNL-IFYKGGKLALSNRAMVMFIC 387
G I S ++++ K+ IE + L+ S V G I KL S ++++ +
Sbjct: 301 ELVRGFIESKSVESLAKLIIEAQKLESMST-DVGGSVGFGIVNACVKLGFSGKSILDELN 359
Query: 388 GYKKDGQIXXXXXXXXXXQEGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSP 447
G I G+Y + C + G A ++ ++ ++G
Sbjct: 360 AQGGSGGI------------GVYVPILKAYCKE--------GRTSEATQLVTEISSSGLQ 399
Query: 448 MGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHIICEETAYSVGKSD 507
+ ETY ++ A A L + M++ + D ++ + +
Sbjct: 400 LDVETYNTMIEASMTKHDFLSALTLFRDMRETRVA-----DLKRCYLTIMTGLLENQRPE 454
Query: 508 LAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAY 567
L + + ED V +++NS I FCK+G + DA +RRM ++ +P QT+
Sbjct: 455 LMAEFVEEVM-EDPRVEVKSHDWNSIIHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLS 513
Query: 568 MLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHM 627
++ GY S Y E+ ++W + K K A L L + L ++GG+F ++VI+
Sbjct: 514 LINGYVSCEKYFEVVVIWKEFKD--KKAKL--EHALADAFLNALVKGGFFGTALQVIEKC 569
Query: 628 RNHNMYTDKWMYKSEFLRLHKNLYRRLKASDARTEAQSKRFEHVQEFKKWVGI 680
+ ++ DKW YK+ F+ KNL RL R + K+ E + FK W I
Sbjct: 570 QEMKIFVDKWRYKATFMETQKNL--RLPKLRKR---KMKKIEFLDAFKNWARI 617
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 146/309 (47%), Gaps = 39/309 (12%)
Query: 407 EGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGS-PMGRETYMLLLSAYQNGGM 465
E Y SS+ +I AC+ +G+ + AH IL+++ A G +G Y+ +L AY
Sbjct: 354 ESSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYR 413
Query: 466 QREAKALLKQMKK--VSLHHKLSDDAFDKHIICEE--TAYSVGKS-------DLAVALAQ 514
EA L+ ++ + L ++S+ + + ++ +A+++ + DL +
Sbjct: 414 TAEATQLVTEISSSGLQLDVEISNALIEASMTNQDFISAFTLFRDMRENRVVDLKGSYLT 473
Query: 515 ILKG------------------EDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKM 556
I+ G ED V +++NS I FCK+G +EDA + +RRM +
Sbjct: 474 IMTGLLENQRPELMAAFLDEVVEDPRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFL 533
Query: 557 KIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFL---- 612
+ +P QT+ ++ GY S Y + ++W +IK + + L L+ FL
Sbjct: 534 RYEPNNQTYLSLINGYVSGEKYFNVLLLWNEIKGKISSVEAEKRSRLDHALVDAFLYALV 593
Query: 613 RGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHKNLYRRLKASDARTEAQSKRFEHVQ 672
+GG+F+ M+V++ + ++ DKW YK F+ HK L RL R K+ E +
Sbjct: 594 KGGFFDAAMQVVEKSQEMKIFVDKWRYKQAFMETHKKL--RLPKLRKR---NYKKMESLV 648
Query: 673 EFKKWVGID 681
FK W G++
Sbjct: 649 AFKNWAGLN 657
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 48 PWERSTEEILLGKLKSALRSHQVHEAWESFQDFRTLYGYPEVHLVNRLI-----VQSSYS 102
P ++S+ E L +L +H EAW++F+ PE L+N LI V+ S
Sbjct: 55 PDQKSSFE---STLHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGE 111
Query: 103 NDHVWIRKACDLALQIVEEKSGLLQSDGLIKLALSLARLQMLSHVSVILRLMLNKGCVPP 162
+ +++A A ++E+ LL+ + + L S+ + +++ M P
Sbjct: 112 SISHRLKRAFASAAYVIEKDPILLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVP 171
Query: 163 MNLLSLVVFHVVKTEIGTQIASNYLSQVCDFYNCLNDKKSHLAVMVKPDTVVFNLVLDAC 222
+L +V + + + C +++K + KPD V N L+AC
Sbjct: 172 FDLWGHLVIDICRENGSLAPFLKVFKESCRI--SVDEKLEFM----KPDLVASNAALEAC 225
Query: 223 VRFKLSLK-GLCLIELMAMTGTVADAHSIVLISQILEMNGLRDEMMELKGHIDGVSAAYA 281
R SL +IE MA+ G D S ++ + GLR+++ EL+ +DG A
Sbjct: 226 CRQMESLADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASR 285
Query: 282 RHYSQFYDSLLSLHFKFNDIDAAAKLVL 309
R Y +++S + K D+D+ + ++L
Sbjct: 286 R---ILYSNMISGYVKSGDLDSVSDVIL 310
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 143/704 (20%), Positives = 273/704 (38%), Gaps = 121/704 (17%)
Query: 65 LRSHQVHEAWESFQDFRTLYGYPEVHLVNRLIVQSSYSNDHVWIRKACDLALQIVEEKS- 123
LR+ + EAW + L P ++RL+ Q SY + + +A + ++ E+
Sbjct: 92 LRNRKTDEAWAKYVQSTHL---PGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQL 148
Query: 124 GLLQSDGLIKLALSLARL-QMLSHVSVILRLMLNKGCVPPMNLLSLVVFHVVKT-EIGTQ 181
L ++ L LA++ A+ Q L VSVI + M+ G +P + + V + + + G +
Sbjct: 149 HRLDANSLGLLAMAAAKSGQTLYAVSVI-KSMIRSGYLPHVKAWTAAVASLSASGDDGPE 207
Query: 182 IASNYLSQVCDFYNCLNDKKSHLAVMVKPDTVVFNLVLDACVRFKLSLKGLCLIELMAMT 241
+ + D+ L +PDT FN VL+AC + K L E M+
Sbjct: 208 ESIKLFIAITRRVKRFGDQ--SLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEW 265
Query: 242 GTVADAHSIVLISQILEMNGLRDEMME--LKGHID-GVSAAYARHYSQFYDSLLSLHFKF 298
D + ++ ++ G R E++ L+ ID G+ +S L++ + F
Sbjct: 266 DCEPDVLTYNVMIKLCARVG-RKELIVFVLERIIDKGIKVCMTTMHS-----LVAAYVGF 319
Query: 299 NDIDAAAKLVLDM-NRLRD-CHISKECT------------------------------KR 326
D+ A ++V M + RD C + +EC
Sbjct: 320 GDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDE 379
Query: 327 LQKPCFIGIGSSNLKNGLKIHIEPELLQKDSVLKVEGRQNLIFYKGGKLALSNRAMVMFI 386
+ + + + L N + EP LL K +F A +R +
Sbjct: 380 VSEEGVVDVFKKLLPNSVDPSGEPPLLPK------------VF------APDSRIYTTLM 421
Query: 387 CGYKKDGQIXXXXX--XXXXXQEGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVEAT 444
GY K+G++ Q+ + + V+ A + G ++ A +L ++
Sbjct: 422 KGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARM 481
Query: 445 GSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDA------FDKHIICEE 498
G P R TY +LL Y A+ LL++M + + D D I+ ++
Sbjct: 482 GVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE---DAGIEPDVVSYNIIIDGCILIDD 538
Query: 499 TAYSV---------GKSDLAVALAQILKGEDQTVLPLVYN------------------FN 531
+A ++ G + ++ ++K + P + N +N
Sbjct: 539 SAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWN 598
Query: 532 SSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRL 591
+ +C+ G+IEDA + RM + P + T+ + G S + ++W +IK
Sbjct: 599 MLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Query: 592 M----------KGAD-----LVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDK 636
+D L + L + L +R +F++ +E+I M + + +K
Sbjct: 659 CAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNK 718
Query: 637 WMYKSEFLRLHKNLYRRLKASDARTEAQSKRFEHVQEFKKWVGI 680
YK ++ +H ++ AS AR + + +R + FK W+G+
Sbjct: 719 TKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 514 QILKGEDQTVL-PLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGY 572
+ILK +++ L P + ++N+ I FC+ G++++A++ M + I+P I T+ + GY
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 573 SSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNM 632
+++GM+ EI D+ M D N +++++ + R G + M+ + ++ +
Sbjct: 747 TAMGMFAEIE----DVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP 802
Query: 633 YTDKWMYKSEFLRLHKNL 650
D + LR+ +NL
Sbjct: 803 CFDDQSIQRLALRVRENL 820
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 7/152 (4%)
Query: 418 CSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMK 477
CS V+ AC + G L A + ++++ G G TY LL + G+ EA ++LK+M+
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 478 KVSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFF 537
+ S +D ++ K V KG V+P + + I +
Sbjct: 344 ENSCP---ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG----VMPNAITYTTVIDAY 396
Query: 538 CKAGMIEDALKAYRRMGKMKIQPTIQTFAYML 569
KAG ++ALK + M + P T+ +L
Sbjct: 397 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 452 TYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHIICEETAYSVGKSDLAVA 511
TY +L+ + + EA L+K+M++ + + +C + + +
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE----L 380
Query: 512 LAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCG 571
L Q+L ++ ++P V +N+ I +CK GMIEDA+ M K+ P +T+ ++ G
Sbjct: 381 LGQML---EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 572 YSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHN 631
Y +++ + ++ ++R + D+V Y L+ R G F+ ++ M +
Sbjct: 438 YCKSNVHKAMGVLNKMLERKVL-PDVV----TYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 632 MYTDKWMYKS 641
+ D+W Y S
Sbjct: 493 LVPDQWTYTS 502
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 35/260 (13%)
Query: 421 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAY----QNGGMQREAKALLKQM 476
VI A + G + A D+++D++ G +Y L+ Y NG M + A A+LK+M
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK-ADAVLKEM 287
Query: 477 KKVSLHHKLSD-----DAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFN 531
+ + L+ D F K +L ++ + DQ V P V ++N
Sbjct: 288 VENDVSPNLTTFNILIDGFWKD------------DNLPGSMKVFKEMLDQDVKPNVISYN 335
Query: 532 SSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRL 591
S I C G I +A+ +M +QP + T+ ++ G+ M +E ++G +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV--- 392
Query: 592 MKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHKNLY 651
KG V +Y +L+ + + G + + + M + D Y L +N
Sbjct: 393 -KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN-- 449
Query: 652 RRLKASDARTEAQSKRFEHV 671
EA K F+ +
Sbjct: 450 -------GNIEAAKKLFDQL 462
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 423 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLH 482
G C + G +E A + + ++ + Y +L+ Y G R+A + M ++ +
Sbjct: 305 GYC-KKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVR 363
Query: 483 HKLSDDAFDKHIICEETAYSVGKSDLAVALAQIL-KGEDQTVLPLVYNFNSSIFFFCKAG 541
+ IC KS V QI + D ++ P + +N+ + +C+AG
Sbjct: 364 TNTT--------ICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
Query: 542 MIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNR 601
+++ALK +M + ++ PT+ T+ +L GYS +G + ++ +W + + AD +
Sbjct: 416 YVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS 475
Query: 602 DLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTD 635
L E L + G F M++ +++ + TD
Sbjct: 476 TLLEAL----FKLGDFNEAMKLWENVLARGLLTD 505
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 49/266 (18%)
Query: 421 VIGACIQMGW-LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKV 479
VI AC + G + D+++ G R T+ LL+ GG+ A+ L +M
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-- 366
Query: 480 SLHHKLSDDAFDKHIICEETAYSVGKSDLAVA-LAQILKGEDQTVLPLVYNFNSSIFFFC 538
+ ++ D F + + + G+ DLA LAQ+ + ++P V ++++ I F
Sbjct: 367 --NRRIEQDVFSYNTLLDAICKG-GQMDLAFEILAQM---PVKRIMPNVVSYSTVIDGFA 420
Query: 539 KAGMIEDALKAY-----------------------------------RRMGKMKIQPTIQ 563
KAG ++AL + R M + I+ +
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 564 TFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEV 623
T+ +L GY G Y E+ V+ ++KR ++ N Y L+ + +GG ++ ME+
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKR----EHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 624 IDHMRNHNMYTDKWMYKSEFLRLHKN 649
++ + D +Y + L KN
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKN 562
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 418 CSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMK 477
C+ +IG+ +++GW+E A + ++ +G + T ++++A G + L Q++
Sbjct: 203 CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 478 KVSLHHKLSDDAFDKHIICEETAYSV-GKSDLAVALAQILKGEDQTVLPLVYNFNSSIFF 536
+ ++ + ++ I +AYS G + A L + G+ + P VY +N+ I
Sbjct: 263 EKGVYPDIV--TYNTLI----SAYSSKGLMEEAFELMNAMPGKGFS--PGVYTYNTVING 314
Query: 537 FCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGAD 596
CK G E A + + M + + P T+ +L G E V+ D M+ D
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD----MRSRD 370
Query: 597 LVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 639
+V + + ++ F R G ++ + + ++ + D +Y
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 101/265 (38%), Gaps = 43/265 (16%)
Query: 411 AVAGSSLCSDVIGACIQMGWL-ESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREA 469
+A + + + C + G L + A + ++++A G + TY LL Y +EA
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 470 KALLKQMKKVSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGE--DQTVLPLV 527
+L +M + F I+ + S D + A LK + ++ P V
Sbjct: 334 MKVLNEMVL---------NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 528 YNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGD 587
+ + + + F +AG +E A+ + M +P I TF + Y + G + E+ ++ +
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 588 IK-------------------------------RLMKGADLVGNRDLYELLLLNFLRGGY 616
I + MK A V R+ + L+ + R G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 617 FERVMEVIDHMRNHNMYTDKWMYKS 641
FE+ M V M + + D Y +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNT 529
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 11/221 (4%)
Query: 419 SDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKK 478
+ ++ + G +E A ++ + EA G TY L+ AY G +A+ +LK+M
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 479 VSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFC 538
L + + C G+ L LA + + P FNS + +C
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA-------KGIAPNATTFNSLVKQYC 607
Query: 539 KAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLV 598
++ A Y+ M + P +T+ ++ G+ +E ++ + MKG
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE----MKGKGFS 663
Query: 599 GNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 639
+ Y +L+ FL+ F EV D MR + DK ++
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 11/221 (4%)
Query: 419 SDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKK 478
+ ++ + G +E A ++ + EA G TY L+ AY G +A+ +LK+M
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 479 VSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFC 538
L + + C G+ L LA + + P FNS + +C
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA-------KGIAPNATTFNSLVKQYC 607
Query: 539 KAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLV 598
++ A Y+ M + P +T+ ++ G+ +E ++ + MKG
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE----MKGKGFS 663
Query: 599 GNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 639
+ Y +L+ FL+ F EV D MR + DK ++
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 11/209 (5%)
Query: 431 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 490
LE A ++ ++++ +G T+ +L+ A+ G EA LK+MK + L L
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 491 DKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAY 550
C+ GK+ ++L+ D P +N+ I FCK G +++A + +
Sbjct: 253 LIRGFCDCGELDRGKA----LFDEVLERGDS---PCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 551 RRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLN 610
M + ++P + T+ ++ G +G +E + LM D N Y +++
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL----QLLNLMIEKDEEPNAVTYNIIINK 361
Query: 611 FLRGGYFERVMEVIDHMRNHNMYTDKWMY 639
+ G +E+++ M+ D Y
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITY 390
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 411 AVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAK 470
VA + + +I A ++ G ++ A +++++ GSP+ TY L+ G +A+
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 471 ALLKQMKKVSLHHKLSDDAFDKHIICEETAYSVGKSDL---AVALAQ--ILKGEDQTVLP 525
+L ++M L D +I C + +S + AV + +L+G P
Sbjct: 585 SLFEKM--------LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST----P 632
Query: 526 LVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYML 569
+ FNS I C+AG IED L +R++ I P TF ++
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 107/244 (43%), Gaps = 27/244 (11%)
Query: 427 QMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLS 486
Q G + + +++++ + TY +L+ + GG +E V+L H +
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV---------VTLFHDMV 414
Query: 487 DDAFDKHI-ICEETAYSVGKSDL---AVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGM 542
++ + + E ++ GK L A + Q + D ++P + I F +A +
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND--IVPSSKAYTGVIEAFGQAAL 472
Query: 543 IEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRD 602
E+AL A+ M ++ P+I+TF +L ++ G+ +E + + RL+ + + NRD
Sbjct: 473 YEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAI---LSRLVD-SGIPRNRD 528
Query: 603 LYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS-----EFLRL---HKNLYRRL 654
+ + + +GG FE ++ M D+ ++ F RL + + +
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM 588
Query: 655 KASD 658
KASD
Sbjct: 589 KASD 592
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 410 YAVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREA 469
Y++ LC D G L++A ++ +++E G TY L+ + N G +
Sbjct: 266 YSIIIDGLCKD--------GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 470 KALLKQMKKVSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQT-VLPLVY 528
LL+ M K K+S + ++ + S K Q+LK Q + P
Sbjct: 318 AKLLRDMIK----RKISPNVVTFSVLID----SFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 529 NFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGY-------SSLGMYREI 581
+NS I FCK +E+A++ M P I TF ++ GY L ++RE+
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 582 TIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYK 640
+ ++G ++ N Y L+ F + G E ++ M + + D YK
Sbjct: 430 S---------LRG--VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 419 SDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKK 478
+ +I + + G + A + LD + G TY L+ + G EA +L++M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM-- 406
Query: 479 VSLHHKLSDDAFDKHIICEETAYS----VGKSDLAVALAQILKGEDQTVLPLVYNFNSSI 534
+D+ F ++ + GK + A+A+ + +K ++ + P V ++++ +
Sbjct: 407 -------NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK--EKGLSPDVVSYSTVL 457
Query: 535 FFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKG 594
FC++ +++AL+ R M + I+P T++ ++ G+ +E ++ ++ R+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV--- 514
Query: 595 ADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 639
L + Y L+ + G E+ +++ + M + D Y
Sbjct: 515 -GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 12/230 (5%)
Query: 413 AGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQRE-AKA 471
+ SS+ V+ + ++ ++ A I+ +A G G +Y +L A A+
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 472 LLKQMKKVSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFN 531
+ K+M L ++S + F +I+ ++ ++ VAL K E + LP V +N
Sbjct: 192 VFKEM----LESQVSPNVFTYNILIRGFCFA---GNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 532 SSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRL 591
+ I +CK I+D K R M ++P + ++ ++ G G +E++ V ++ R
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 592 MKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 641
D V Y L+ + + G F + + + M H + Y S
Sbjct: 305 GYSLDEVT----YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 421 VIGACIQMGWLESAHDILDDVEATGSPMGRETYML--LLSAYQNGGMQREAKALLKQMKK 478
++ A Q G ++ + + D++ SP+ + Y ++ AY GM +E +A+L +M+
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDM--SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR- 270
Query: 479 VSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFC 538
++ D +++ + + +++ +++ LP FNS I +
Sbjct: 271 ---SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP---TFNSMIINYG 324
Query: 539 KAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGY---SSLGMYREITIVWGDIKRLMKGA 595
KA MI+ A +++M M P+ T+ M+ Y S+ REI G+ R++K +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 596 DLVGNRDLY 604
L ++Y
Sbjct: 385 TLNAMLEVY 393
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 519 EDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMY 578
E++ V P ++ +N+ I +CK M +AL RM + + P I T+ + G+S G
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 579 REITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWM 638
RE T ++ +IK D+ N Y L+ + R + + + + M +
Sbjct: 290 REATRLFREIK-----DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 639 YKSEFLRLHKNLYRRLKASDARTEAQSKRFE 669
Y S +L ++ R +A+ TE K+ E
Sbjct: 345 YNSILRKLCED-GRIREANRLLTEMSGKKIE 374
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 421 VIGACIQMGWLESAHDILDDVEATGSPMGRETYML--LLSAYQNGGMQREAKALLKQMKK 478
++ A Q G ++ + + D++ SP+ + Y ++ AY GM +E +A+L +M+
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDM--SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR- 270
Query: 479 VSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFC 538
++ D +++ + + +++ +++ LP FNS I +
Sbjct: 271 ---SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP---TFNSMIINYG 324
Query: 539 KAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGY---SSLGMYREITIVWGDIKRLMKGA 595
KA MI+ A +++M M P+ T+ M+ Y S+ REI G+ R++K +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 596 DLVGNRDLY 604
L ++Y
Sbjct: 385 TLNAMLEVY 393
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 20/221 (9%)
Query: 423 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLH 482
G C W + A + D ++ +P T+ +L+ ++ G REA+ L K+M +H
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINP-NVVTFSVLIDSFVKEGKLREAEELHKEM----IH 361
Query: 483 HKLSDDAFDKHII----CEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFC 538
++ D + C+E + K++ V L + KG D P + FN I +C
Sbjct: 362 RGIAPDTITYTSLIDGFCKEN--HLDKANQMVDL-MVSKGCD----PNIRTFNILINGYC 414
Query: 539 KAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLV 598
KA I+D L+ +R+M + T+ ++ G+ LG V ++ + M +
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN----VAKELFQEMVSRKVP 470
Query: 599 GNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 639
N Y++LL G E+ +E+ + + M D +Y
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511